CANDIDATE ID: 533

CANDIDATE ID: 533

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9912030e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    6.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7990 (fruB) (b2169)
   Products of gene:
     - FRUB-MONOMER (FruB)
     - CPLX-158 (fructose PTS transporter)
       Reactions:
        D-fructose[periplasmic space] + phosphoenolpyruvate  ->  fructose-1-phosphate[cytosol] + pyruvate

- EG11912 (frwD) (b3953)
   Products of gene:
     - EG11912-MONOMER (PTS system fructose-like IIB component 2)

- EG11909 (frwB) (b3950)
   Products of gene:
     - FRWB-MONOMER (FrwB)
     - CPLX-160 (EIIBCFrw)

- EG11908 (frwC) (b3949)
   Products of gene:
     - FRWC-MONOMER (FrwC)
     - CPLX-160 (EIIBCFrw)

- EG11906 (ptsA) (b3947)
   Products of gene:
     - EG11906-MONOMER (PEP-protein phosphotransferase system enzyme I)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 189
Effective number of orgs (counting one per cluster within 468 clusters): 101

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP28240 Thermotoga sp.5
TSP1755 Thermoanaerobacter sp.5
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSUI391296 ncbi Streptococcus suis 98HAH334
SSON300269 ncbi Shigella sonnei Ss0465
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153055
SPYO370554 ncbi Streptococcus pyogenes MGAS107504
SPYO370553 ncbi Streptococcus pyogenes MGAS20965
SPYO370552 ncbi Streptococcus pyogenes MGAS102705
SPYO370551 ncbi Streptococcus pyogenes MGAS94295
SPYO319701 ncbi Streptococcus pyogenes MGAS61805
SPYO293653 ncbi Streptococcus pyogenes MGAS50055
SPYO286636 ncbi Streptococcus pyogenes MGAS103945
SPYO198466 ncbi Streptococcus pyogenes MGAS3155
SPYO193567 ncbi Streptococcus pyogenes SSI-15
SPYO186103 ncbi Streptococcus pyogenes MGAS82325
SPYO160490 ncbi Streptococcus pyogenes M1 GAS5
SPRO399741 ncbi Serratia proteamaculans 5685
SPNE488221 ncbi Streptococcus pneumoniae 705855
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-65
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-145
SPNE171101 ncbi Streptococcus pneumoniae R64
SPNE1313 Streptococcus pneumoniae4
SMUT210007 ncbi Streptococcus mutans UA1595
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14355
SGOR29390 Streptococcus gordonii Challis4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122285
SEPI176279 ncbi Staphylococcus epidermidis RP62A5
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SBOY300268 ncbi Shigella boydii Sb2275
SAUR93062 ncbi Staphylococcus aureus aureus COL5
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83255
SAUR426430 ncbi Staphylococcus aureus aureus Newman5
SAUR418127 ncbi Staphylococcus aureus aureus Mu35
SAUR367830 Staphylococcus aureus aureus USA3005
SAUR359787 ncbi Staphylococcus aureus aureus JH15
SAUR359786 ncbi Staphylococcus aureus aureus JH95
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4765
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2525
SAUR273036 ncbi Staphylococcus aureus RF1225
SAUR196620 ncbi Staphylococcus aureus aureus MW25
SAUR158879 ncbi Staphylococcus aureus aureus N3155
SAUR158878 ncbi Staphylococcus aureus aureus Mu505
SAGA211110 ncbi Streptococcus agalactiae NEM3164
SAGA208435 ncbi Streptococcus agalactiae 2603V/R5
SAGA205921 ncbi Streptococcus agalactiae A9095
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10004
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257455
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 374
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
PACN267747 ncbi Propionibacterium acnes KPA1712024
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LLAC272623 ncbi Lactococcus lactis lactis Il14034
LLAC272622 ncbi Lactococcus lactis cremoris SK114
LINN272626 ncbi Listeria innocua Clip112625
LGAS324831 ncbi Lactobacillus gasseri ATCC 333234
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
HMAR272569 ncbi Haloarcula marismortui ATCC 430495
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5835
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DGEO319795 ncbi Deinococcus geothermalis DSM 113004
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CDIF272563 ncbi Clostridium difficile 6305
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BTUR314724 ncbi Borrelia turicatae 91E1354
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BSUB ncbi Bacillus subtilis subtilis 1685
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BHER314723 ncbi Borrelia hermsii DAH4
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K165
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BBUR224326 ncbi Borrelia burgdorferi B314
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAFZ390236 ncbi Borrelia afzelii PKo4
ASP62977 ncbi Acinetobacter sp. ADP15
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis5
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  G7990   EG11912   EG11909   EG11908   EG11906   
YPSE349747 YPSIP31758_2683YPSIP31758_3532YPSIP31758_3530YPSIP31758_3529YPSIP31758_3528
YPSE273123 YPTB1329YPTB0542YPTB0543YPTB0544YPTB0545
YPES386656 YPDSF_2399YPDSF_3229YPDSF_3228YPDSF_3227YPDSF_3226
YPES377628 YPN_2681YPN_0272YPN_0273YPN_0274YPN_0275
YPES360102 YPA_1015YPA_3883YPA_3882YPA_3881YPA_3880
YPES349746 YPANGOLA_A1524YPANGOLA_A0869YPANGOLA_A0867YPANGOLA_A0866YPANGOLA_A0865
YPES214092 YPO1298YPO0402YPO0403YPO0404YPO0405
YPES187410 Y2887Y3780Y3778Y3777Y3776
YENT393305 YE1447YE1449YE1449YE1449YE1206
XORY360094 XOOORF_1892XOOORF_1890XOOORF_1890XOOORF_1892
XORY342109 XOO2650XOO2652XOO2652XOO2650
XORY291331 XOO2810XOO2812XOO2812XOO2810
XCAM487884 XCC-B100_1802XCC-B100_1800XCC-B100_1800XCC-B100_1802
XCAM316273 XCAORF_2650XCAORF_2652XCAORF_2652XCAORF_2650
XCAM314565 XC_1744XC_1742XC_1742XC_1744
XCAM190485 XCC2370XCC2372XCC2372XCC2370
XAXO190486 XAC2501XAC2503XAC2503XAC2501
VVUL216895 VV2_0200VV2_1352VV2_1352VV2_1353VV1_0211
VVUL196600 VVA0706VVA0191VVA0191VVA0192VV0977
VPAR223926 VPA0813VPA1421VPA1421VPA1420VP0794
VFIS312309 VFA0942VFA0712VFA0712VFA0713VF1896
VCHO345073 VC0395_0451VC0395_A1418VC0395_A1418VC0395_A1417VC0395_A0487
VCHO VCA0518VC1823VC1823VC1822VC0965
TTEN273068 TTE0341TTE2585TTE2585TTE2585TTE2334
TSP28240 TRQ2_0638TRQ2_0639TRQ2_0639TRQ2_0639TRQ2_0637
TSP1755 TETH514_0270TETH514_0826TETH514_0826TETH514_0825TETH514_0827
TPSE340099 TETH39_1940TETH39_0334TETH39_0334TETH39_0333TETH39_0335
STYP99287 STM2206STM4116STM4113STM4112STM4110
STHE292459 STH795STH796STH796STH796STH3279
SSUI391296 SSU98_1215SSU98_0825SSU98_0825SSU98_1214
SSON300269 SSO_2225SSO_4126SSO_2479SSO_4122SSO_4121
SSAP342451 SSP0726SSP2017SSP2017SSP2017SSP1707
SPYO370554 MGAS10750_SPY1223MGAS10750_SPY0753MGAS10750_SPY0753MGAS10750_SPY1222
SPYO370553 MGAS2096_SPY1186MGAS2096_SPY0733MGAS2096_SPY0733MGAS2096_SPY0733MGAS2096_SPY1185
SPYO370552 MGAS10270_SPY1191MGAS10270_SPY0721MGAS10270_SPY0721MGAS10270_SPY0721MGAS10270_SPY1190
SPYO370551 MGAS9429_SPY1168MGAS9429_SPY0717MGAS9429_SPY0717MGAS9429_SPY0717MGAS9429_SPY1167
SPYO319701 M28_SPY1114M28_SPY0643M28_SPY0643M28_SPY0643M28_SPY1113
SPYO293653 M5005_SPY1121M5005_SPY0662M5005_SPY0662M5005_SPY0662M5005_SPY1120
SPYO286636 M6_SPY1095M6_SPY0681M6_SPY0681M6_SPY0681M6_SPY1094
SPYO198466 SPYM3_1047SPYM3_0580SPYM3_0580SPYM3_0580SPYM3_1046
SPYO193567 SPS0814SPS1274SPS1274SPS1274SPS0815
SPYO186103 SPYM18_1385SPYM18_0914SPYM18_0914SPYM18_0914SPYM18_1384
SPYO160490 SPY1373SPY0855SPY0855SPY0855SPY1372
SPRO399741 SPRO_3230SPRO_3228SPRO_3228SPRO_3228SPRO_3449
SPNE488221 SP70585_0469SP70585_1660SP70585_1660SP70585_0915SP70585_1228
SPNE487214 SPH_0506SPH_1732SPH_1732SPH_0981SPH_1297
SPNE487213 SPT_1046SPT_1558SPT_1558SPT_1324SPT_1047
SPNE171101 SPR0358SPR0780SPR0780SPR1062
SPNE1313 SPJ_0385SPJ_0818SPJ_0818SPJ_1094
SMUT210007 SMU_1183SMU_872SMU_114SMU_114SMU_675
SHIGELLA FRUBFRWDFRWBFRWCS2588
SHAE279808 SH0233SH2194SH2194SH2194SH1874
SGOR29390 SGO_1556SGO_1113SGO_1113SGO_1555
SFLE373384 SFV_2244SFV_4022SFV_4019SFV_4018SFV_2441
SFLE198214 AAN43773.1AAN45460.1AAN45457.1AAN45456.1AAN43958.1
SEPI176280 SE_0781SE_0472SE_0472SE_2228SE_0782
SEPI176279 SERP0669SERP0359SERP0359SERP2260SERP0670
SENT454169 SEHA_C2442SEHA_C4189SEHA_C2440SEHA_C2440SEHA_C2692
SENT321314 SCH_2222SCH_4006SCH_4004SCH_4003SCH_4002
SENT295319 SPA0645SPA0647SPA0647SPA0647SPA0433
SENT220341 STY2442STY2439STY2439STY2439STY3144
SENT209261 T0650T0651T0651T0651T0425
SDYS300267 SDY_2317SDY_3788SDY_3785SDY_3784SDY_3782
SBOY300268 SBO_2155SBO_3972SBO_3969SBO_3968SBO_3967
SAUR93062 SACOL2148SACOL2663SACOL2663SACOL2663SACOL1092
SAUR93061 SAOUHSC_02402SAOUHSC_00708SAOUHSC_00708SAOUHSC_02975SAOUHSC_01029
SAUR426430 NWMN_2059NWMN_0669NWMN_0669NWMN_2540NWMN_0950
SAUR418127 SAHV_2142SAHV_0697SAHV_0697SAHV_2625SAHV_1076
SAUR367830 SAUSA300_2107SAUSA300_2576SAUSA300_0685SAUSA300_2576SAUSA300_0984
SAUR359787 SAURJH1_2228SAURJH1_2721SAURJH1_0740SAURJH1_2721SAURJH1_1166
SAUR359786 SAURJH9_2190SAURJH9_2665SAURJH9_0724SAURJH9_2665SAURJH9_1144
SAUR282459 SAS2059SAS2527SAS0665SAS2527SAS1019
SAUR282458 SAR2246SAR0753SAR0753SAR2720SAR1057
SAUR273036 SAB2038SAB2516SAB0649SAB2516SAB0950
SAUR196620 MW2084MW2562MW0662MW2562MW0966
SAUR158879 SA1962SA2434SA0655SA2434SA0935
SAUR158878 SAV2158SAV0700SAV0700SAV2641SAV1084
SAGA211110 GBS0839GBS1416GBS1416GBS0840
SAGA208435 SAG_0821SAG_1346SAG_1346SAG_1346SAG_0822
SAGA205921 SAK_0945SAK_1761SAK_1761SAK_1377SAK_0946
RSPH349101 RSPH17029_0433RSPH17029_0435RSPH17029_0435RSPH17029_0433
RSPH272943 RSP_1786RSP_1788RSP_1788RSP_1786
RSOL267608 RSC2861RSC2863RSC2863RSP1282
PSYR223283 PSPTO_0954PSPTO_0956PSPTO_0956PSPTO_0956PSPTO_0954
PSYR205918 PSYR_0821PSYR_0823PSYR_0823PSYR_0823PSYR_0821
PSTU379731 PST_0988PST_0990PST_0990PST_0990PST_0988
PPUT76869 PPUTGB1_0827PPUTGB1_0829PPUTGB1_0829PPUTGB1_0829PPUTGB1_0827
PPUT351746 PPUT_0816PPUT_0818PPUT_0818PPUT_0818PPUT_0816
PPUT160488 PP_0793PP_0795PP_0795PP_0795PP_0793
PPRO298386 PBPRA1573PBPRA2719PBPRA2719PBPRA2055PBPRA0862
PPEN278197 PEPE_0609PEPE_0142PEPE_1164PEPE_0142PEPE_0610
PMUL272843 PM1797PM1795PM1795PM0897
PMEN399739 PMEN_0786PMEN_0788PMEN_0788PMEN_0786
PLUM243265 PLU1992PLU1993PLU1993PLU1993PLU1393
PING357804 PING_3551PING_3553PING_3553PING_2440
PFLU220664 PFL_0859PFL_0861PFL_0861PFL_0861PFL_4931
PFLU216595 PFLU0804PFLU0806PFLU0806PFLU0806PFLU5037
PFLU205922 PFL_0793PFL_0795PFL_0795PFL_0795PFL_0793
PENT384676 PSEEN0932PSEEN0934PSEEN0934PSEEN0934PSEEN0932
PAER208964 PA3562PA3560PA3560PA3560PA3562
PAER208963 PA14_18250PA14_18275PA14_18275PA14_18275PA14_18250
PACN267747 PPA0919PPA2233PPA2233PPA2233
OIHE221109 OB2601OB0838OB0838OB2432
MTHE264732 MOTH_0015MOTH_0013MOTH_0013MOTH_0013MOTH_0016
MSUC221988 MS2180MS2178MS2178MS2178MS1509
LWEL386043 LWE0986LWE2155LWE0600LWE0599LWE0987
LMON265669 LMOF2365_0442LMOF2365_0662LMOF2365_0662LMOF2365_0661LMOF2365_1024
LMON169963 LMO0426LMO2136LMO0633LMO0632LMO1003
LLAC272623 L32907L185031L185031L120628
LLAC272622 LACR_0029LACR_1033LACR_1033LACR_0104
LINN272626 LIN1001LIN2241LIN0377LIN0448LIN1002
LGAS324831 LGAS_1361LGAS_0149LGAS_0149LGAS_1360
KPNE272620 GKPORF_B1886GKPORF_B5444GKPORF_B5447GKPORF_B5448GKPORF_B5449
HMAR272569 PNG7388PNG7392PNG7392PNG7387PNG7391
HINF71421 HI_0448HI_0446HI_0446HI_0446HI_1712
HINF374930 CGSHIEE_00750CGSHIEE_00760CGSHIEE_00760CGSHIEE_00760CGSHIEE_03470
HINF281310 NTHI0575NTHI0573NTHI0573NTHI0573NTHI2021
HAUR316274 HAUR_4712HAUR_4714HAUR_4714HAUR_4714HAUR_1528
GTHE420246 GTNG_1845GTNG_3217GTNG_3217GTNG_1726GTNG_0880
GKAU235909 GK1946GK1838GK1838GK0996
GBET391165 GBCGDNIH1_0412GBCGDNIH1_0410GBCGDNIH1_0410GBCGDNIH1_0412
ESP42895 ENT638_2763ENT638_2761ENT638_2761ENT638_2761ENT638_2944
EFER585054 EFER_2256EFER_3810EFER_3813EFER_3814EFER_3815
EFAE226185 EF_0412EF_0694EF_0694EF_0694EF_0710
ECOO157 FRUBFRWDFRWBFRWC_1PTSA
ECOL83334 ECS3061ECS4882ECS4879ECS4878ECS4877
ECOL585397 ECED1_2617ECED1_4658ECED1_4655ECED1_4654ECED1_2830
ECOL585057 ECIAI39_2309ECIAI39_3036ECIAI39_3039ECIAI39_3040ECIAI39_3041
ECOL585056 ECUMN_2505ECUMN_4484ECUMN_4481ECUMN_4480ECUMN_2713
ECOL585055 EC55989_2422EC55989_4435EC55989_4432EC55989_4431EC55989_4430
ECOL585035 ECS88_2317ECS88_4408ECS88_4405ECS88_4404ECS88_4403
ECOL585034 ECIAI1_2249ECIAI1_4161ECIAI1_4158ECIAI1_4157ECIAI1_4156
ECOL481805 ECOLC_1479ECOLC_4063ECOLC_4066ECOLC_4067ECOLC_4068
ECOL469008 ECBD_1489ECBD_4071ECBD_4074ECBD_4075ECBD_1289
ECOL439855 ECSMS35_2316ECSMS35_4401ECSMS35_4397ECSMS35_4396ECSMS35_4395
ECOL413997 ECB_02098ECB_03838ECB_03835ECB_03834ECB_03833
ECOL409438 ECSE_2437ECSE_4246ECSE_4243ECSE_4242ECSE_4241
ECOL405955 APECO1_4385APECO1_2514APECO1_2800APECO1_2518APECO1_4154
ECOL364106 UTI89_C2444UTI89_C4544UTI89_C4540UTI89_C4539UTI89_C4538
ECOL362663 ECP_2209ECP_4166ECP_4163ECP_4162ECP_4161
ECOL331111 ECE24377A_2466ECE24377A_4493ECE24377A_4489ECE24377A_4488ECE24377A_4487
ECOL316407 ECK2162:JW2156:B2169ECK3944:JW3925:B3953ECK3941:JW3922:B3950ECK3940:JW3921:B3949ECK3939:JW5555:B3947
ECOL199310 C2704C4912C4908C4907C4906
ECAR218491 ECA2729ECA0341ECA0341ECA2727ECA0892
DNOD246195 DNO_0610DNO_0610DNO_0610DNO_0610DNO_0118
DGEO319795 DGEO_2173DGEO_2175DGEO_2175DGEO_2622
CVIO243365 CV_3052CV_2310CV_2310CV_2309CV_2311
CSAL290398 CSAL_2648CSAL_2646CSAL_2646CSAL_2646CSAL_2648
CPER289380 CPR_1641CPR_0550CPR_0550CPR_2352
CPER195103 CPF_1923CPF_0564CPF_0564CPF_2666
CPER195102 CPE1669CPE0584CPE0584CPE2357
CDIF272563 CD2332CD3014CD0208CD0207CD2755
CBOT536232 CLM_2690CLM_2208CLM_2208CLM_2208CLM_3905
CBOT515621 CLJ_B2622CLJ_B2196CLJ_B2196CLJ_B2196CLJ_B3746
CBOT498213 CLD_2243CLD_2633CLD_2633CLD_2633CLD_1067
CBOT441772 CLI_2453CLI_2058CLI_2058CLI_2058CLI_3620
CBOT441771 CLC_2244CLC_1937CLC_1937CLC_1937CLC_3382
CBOT441770 CLB_2261CLB_1931CLB_1931CLB_1931CLB_3494
CBOT36826 CBO2398CBO1991CBO1991CBO1991CBO3438
CACE272562 CAC0156CAC0234CAC0234CAC0234CAC3087
BWEI315730 BCERKBAB4_3878BCERKBAB4_3482BCERKBAB4_3482BCERKBAB4_3877
BTUR314724 BT0408BT0408BT0408BT0558
BTHU412694 BALH_3665BALH_4764BALH_4764BALH_4764BALH_3664
BTHU281309 BT9727_3790BT9727_3462BT9727_3462BT9727_3789
BSUB BSU03982BSU12010BSU12010BSU12010BSU13910
BPUM315750 BPUM_0370BPUM_0218BPUM_1336BPUM_1281
BLIC279010 BL03568BL00289BL00289BL00289BL03569
BHER314723 BH0408BH0408BH0408BH0558
BHAL272558 BH3852BH0828BH0828BH3073
BCLA66692 ABC2927ABC0447ABC0447ABC0859ABC2658
BCER572264 BCA_4161BCA_5404BCA_5404BCA_5404BCA_4160
BCER405917 BCE_4116BCE_3744BCE_3744BCE_4115
BCER315749 BCER98_2748BCER98_1170BCER98_1170BCER98_1170BCER98_2747
BCER288681 BCE33L3805BCE33L3476BCE33L3476BCE33L3804
BCER226900 BC_4049BC_3718BC_3718BC_4048
BBUR224326 BB_0408BB_0408BB_0408BB_0558
BANT592021 BAA_4291BAA_3869BAA_3869BAA_4290
BANT568206 BAMEG_4309BAMEG_0787BAMEG_0787BAMEG_4308
BANT261594 GBAA4268GBAA3846GBAA3846GBAA4267
BANT260799 BAS3959BAS3563BAS3563BAS3958
BAMY326423 RBAM_004240RBAM_024200RBAM_024200RBAM_024200RBAM_013680
BAFZ390236 BAPKO_0425BAPKO_0425BAPKO_0425BAPKO_0587
ASP62977 ACIAD1990ACIAD1993ACIAD1993ACIAD1993ACIAD1990
ASAL382245 ASA_1939ASA_1395ASA_1395ASA_1397ASA_3061
APLE434271 APJL_0361APJL_0359APJL_0359APJL_0359APJL_1337
APLE416269 APL_0345APL_0343APL_0343APL_0343APL_1323
AMET293826 AMET_4269AMET_0828AMET_0828AMET_0828AMET_1259
AHYD196024 AHA_2348AHA_1419AHA_1419AHA_1431AHA_3040
AAVE397945 AAVE_4252AAVE_4250AAVE_4250AAVE_4252


Organism features enriched in list (features available for 178 out of the 189 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 6.152e-105492
Arrangment:Clusters 8.436e-71517
Arrangment:Pairs 1.571e-1063112
Disease:Anthrax 0.008486944
Disease:Botulism 0.002550555
Disease:Bubonic_plague 0.000763466
Disease:Dysentery 0.000763466
Disease:Gastroenteritis 0.00059261013
Disease:Pneumonia 0.0081942812
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 1.724e-61111
Disease:Urinary_tract_infection 0.008486944
Disease:Wide_range_of_infections 1.724e-61111
Endospores:Yes 1.710e-63253
GC_Content_Range4:0-40 0.004071978213
GC_Content_Range4:60-100 0.000096327145
GC_Content_Range7:30-40 0.002492964166
GC_Content_Range7:60-70 0.000881727134
Genome_Size_Range5:0-2 1.449e-723155
Genome_Size_Range5:4-6 2.325e-1191184
Genome_Size_Range9:0-1 0.0031200227
Genome_Size_Range9:1-2 0.000023021128
Genome_Size_Range9:4-5 2.172e-64996
Genome_Size_Range9:5-6 0.00010664288
Gram_Stain:Gram_Neg 0.005184589333
Gram_Stain:Gram_Pos 1.947e-1179150
Habitat:Aquatic 6.313e-61191
Habitat:Multiple 0.000028375178
Habitat:Specialized 0.0000241453
Motility:Yes 0.000505799267
Optimal_temp.:30-37 1.289e-81718
Oxygen_Req:Aerobic 0.000220039185
Oxygen_Req:Anaerobic 0.000577818102
Oxygen_Req:Facultative 4.420e-22113201
Pathogenic_in:Human 3.290e-16109213
Pathogenic_in:No 1.206e-1232226
Salinity:Non-halophilic 0.000714246106
Shape:Coccus 0.00003404182
Shape:Rod 0.0009292122347
Shape:Sphere 0.0075497119
Shape:Spiral 0.0061956434
Temp._range:Hyperthermophilic 0.0020161123
Temp._range:Mesophilic 8.040e-8166473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 373
Effective number of orgs (counting one per cluster within 468 clusters): 313

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SONE211586 ncbi Shewanella oneidensis MR-11
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SLAC55218 Ruegeria lacuscaerulensis0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)1
SBAL402882 ncbi Shewanella baltica OS1851
SBAL399599 ncbi Shewanella baltica OS1951
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SARE391037 ncbi Salinispora arenicola CNS-2051
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H161
REUT264198 ncbi Ralstonia eutropha JMP1340
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 230
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM51
OANT439375 ncbi Ochrobactrum anthropi ATCC 491881
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP400668 ncbi Marinomonas sp. MWYL11
MSP266779 ncbi Chelativorans sp. BNC11
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-11
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA11
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LCHO395495 ncbi Leptothrix cholodnii SP-60
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP1
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-11
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E881
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CSP501479 Citreicella sp. SE450
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO203907 ncbi Candidatus Blochmannia floridanus1
CAULO ncbi Caulobacter crescentus CB151
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BVIE269482 ncbi Burkholderia vietnamiensis G41
BTRI382640 ncbi Bartonella tribocorum CIP 1054761
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSP376 Bradyrhizobium sp.0
BSP36773 Burkholderia sp.1
BQUI283165 ncbi Bartonella quintana Toulouse1
BPSE320373 ncbi Burkholderia pseudomallei 6681
BPSE320372 ncbi Burkholderia pseudomallei 1710b1
BPSE272560 ncbi Burkholderia pseudomallei K962431
BPET94624 Bordetella petrii1
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BMAL320389 ncbi Burkholderia mallei NCTC 102471
BMAL320388 ncbi Burkholderia mallei SAVP11
BMAL243160 ncbi Burkholderia mallei ATCC 233441
BLON206672 ncbi Bifidobacterium longum NCC27051
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHEN283166 ncbi Bartonella henselae Houston-11
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola1
BCEN331272 ncbi Burkholderia cenocepacia HI24241
BCEN331271 ncbi Burkholderia cenocepacia AU 10541
BCAN483179 ncbi Brucella canis ATCC 233650
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAMB398577 ncbi Burkholderia ambifaria MC40-61
BAMB339670 ncbi Burkholderia ambifaria AMMD1
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN11
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS421
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG11
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5711
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7990   EG11912   EG11909   EG11908   EG11906   
ZMOB264203
XFAS405440
XFAS183190
XFAS160492
XAUT78245
WSUC273121
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TROS309801
TPET390874
TPEN368408 TPEN_1091
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025
TACI273075
SWOL335541
STRO369723
STOK273063
SSP94122 SHEWANA3_3042
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SSED425104
SRUB309807 SRU_1873
SPEA398579 SPEA_1022
SONE211586 SO_1332
SMEL266834
SMED366394
SMAR399550
SLOI323850 SHEW_1039
SLAC55218
SHAL458817 SHAL_1068
SFUM335543
SELO269084
SDEN318161
SDEG203122
SCO SCO3196
SBAL402882 SHEW185_1229
SBAL399599 SBAL195_1262
SAVE227882 SAV3688
SARE391037 SARE_4847
SALA317655
SACI56780 SYN_01729
SACI330779
RTYP257363
RSP357808 ROSERS_1770
RSP101510 RHA1_RO06782
RSAL288705 RSAL33209_3143
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RLEG216596
RFER338969
RFEL315456
REUT381666 H16_A0311
REUT264198
RETL347834
RDEN375451
RCON272944
RCAS383372 RCAS_2048
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_1340
RAKA293614
PTOR263820
PTHE370438
PSP56811
PSP312153
PSP296591
PSP117 RB8591
PRUM264731
PNAP365044
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PATL342610
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844
OTSU357244
OCAR504832 OCAR_4097
OANT439375 OANT_4112
NWIN323098
NSP387092
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848 NMUL_A0220
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
NARO279238
MXAN246197
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSTA339860
MSP400668 MMWYL1_3747
MSP266779 MESO_3575
MSED399549
MPUL272635 MYPU_6020
MPET420662
MPEN272633 MYPE5450
MMOB267748 MMOB4060
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108 AMB4393
MLOT266835
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP470
MHYO262722 MHP7448_0472
MHYO262719 MHJ_0469
MHUN323259
MFLA265072
MEXT419610 MEXT_1234
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LINT363253
LINT267671
LINT189518
LCHO395495
LBRE387344 LVIS_1551
LBOR355277
LBOR355276
LBIF456481
LBIF355278
KRAD266940
JSP375286
JSP290400
ILOI283942
IHOS453591
HWAL362976 HQ2709A
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HHEP235279
HDUC233412 HD_0228
HCHE349521
HBUT415426
HARS204773
HACI382638
GVIO251221
GOXY290633
GFOR411154
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_7071
FSP106370
FRANT
FPHI484022
FNOD381764
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882 DVU_0981
DSP255470
DSP216389
DSHI398580
DRED349161 DRED_0330
DPSY177439
DOLE96561
DHAF138119
DETH243164
DDES207559 DDE_1180
DARO159087
CVES412965
CTRA471473
CTRA471472
CTET212717 CTC_01771
CTEP194439
CSUL444179
CSP78 CAUL_0294
CSP501479
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_1770
CPEL335992
CNOV386415 NT01CX_0334
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_0307
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHYD246194
CHUT269798
CHOM360107
CGLU196627 CG2120
CFET360106
CFEL264202
CEFF196164 CE1829
CDIP257309
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO203907 BFL510
CAULO CC0537
CABO218497
BXEN266265
BVIE269482 BCEP1808_2926
BTRI382640 BT_0154
BTHE226186
BSUI470137
BSUI204722
BSP376
BSP36773 BCEP18194_A6152
BQUI283165 BQ01340
BPSE320373 BURPS668_0537
BPSE320372 BURPS1710B_A0763
BPSE272560 BPSL0498
BPET94624 BPET2829
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BMAL320389 BMA10247_2875
BMAL320388 BMASAVP1_A0141
BMAL243160 BMA_3171
BLON206672 BL0411
BJAP224911
BHEN283166 BH01410
BFRA295405
BFRA272559
BCIC186490 BCI_0070
BCEN331272 BCEN2424_2822
BCEN331271 BCEN_2209
BCAN483179
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAMB398577 BAMMC406_2740
BAMB339670 BAMB_2882
BABO262698
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114 EBD68
ASP62928
ASP232721 AJS_3926
APHA212042
APER272557
AORE350688
ANAE240017 ANA_2658
AMAR329726
AMAR234826
ALAI441768 ACL_0374
AFUL224325
AFER243159
AEHR187272
ADEH290397 ADEH_0152
ACEL351607
ACAU438753 AZC_0344
ABUT367737
ABOR393595
ABAU360910
ABAC204669
AAEO224324


Organism features enriched in list (features available for 347 out of the 373 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.008984099
Arrangment:Chains 6.151e-122592
Arrangment:Clusters 0.0000496217
Arrangment:Pairs 7.743e-1038112
Disease:Gastroenteritis 0.0066619313
Disease:Pneumonia 0.0003022112
Endospores:Yes 1.118e-61553
GC_Content_Range4:0-40 0.0005634109213
GC_Content_Range4:60-100 0.005679698145
GC_Content_Range7:30-40 0.006629987166
GC_Content_Range7:60-70 0.003835892134
Genome_Size_Range5:0-2 0.0000532112155
Genome_Size_Range5:4-6 1.268e-781184
Genome_Size_Range9:1-2 0.000041695128
Genome_Size_Range9:4-5 0.00012214196
Genome_Size_Range9:5-6 0.00143344088
Gram_Stain:Gram_Neg 0.0000697220333
Gram_Stain:Gram_Pos 2.685e-2239150
Habitat:Aquatic 3.996e-97891
Habitat:Multiple 6.729e-877178
Habitat:Specialized 1.063e-64753
Optimal_temp.:- 0.0025867168257
Optimal_temp.:25-35 0.0033618314
Oxygen_Req:Aerobic 0.0000112133185
Oxygen_Req:Anaerobic 0.000505975102
Oxygen_Req:Facultative 3.793e-2364201
Pathogenic_in:Human 1.926e-993213
Pathogenic_in:No 6.940e-7162226
Pathogenic_in:Plant 0.0016617315
Salinity:Mesophilic 0.00982001213
Salinity:Non-halophilic 0.000016844106
Shape:Coccus 0.00002833282
Shape:Irregular_coccus 0.00012551717
Shape:Rod 0.0004183188347
Shape:Spiral 0.00681572734
Temp._range:Hyperthermophilic 0.00008082223
Temp._range:Mesophilic 1.634e-9255473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
BAFZ390236 ncbi Borrelia afzelii PKo 0.00997792294


Names of the homologs of the genes in the group in each of these orgs
  G7990   EG11912   EG11909   EG11908   EG11906   
BAFZ390236 BAPKO_0425BAPKO_0425BAPKO_0425BAPKO_0587


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Acrodermatitis_chronica_atrophicans 0.001715311



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1314 (fructose degradation)2241720.7570
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))1211060.6116
PWY0-1295 (pyrimidine ribonucleosides degradation I)2391400.4846
SUCUTIL-PWY (sucrose degradation I)124930.4843
PWY-5480 (pyruvate fermentation to ethanol I)109850.4773
GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation)134960.4703
PWY0-1324 (N-acetylneuraminate and N-acetylmannosamine degradation)135960.4665
P122-PWY (heterolactic fermentation)119880.4610
PWY-5497 (purine nucleotides degradation IV (anaerobic))122890.4574
PWY-5493 (reductive monocarboxylic acid cycle)2431360.4458
GLUAMCAT-PWY (N-acetylglucosamine degradation I)3561710.4445
MANNIDEG-PWY (mannitol degradation I)99760.4390
P441-PWY (superpathway of N-acetylneuraminate degradation)63560.4272
PWY-3722 (glycine betaine biosynthesis II (Gram-positive bacteria))141920.4107
IDNCAT-PWY (L-idonate degradation)2461320.4098
ARGDEGRAD-PWY (arginine degradation V (arginine deiminase pathway))1651010.4031
METHIONINE-DEG1-PWY (methionine degradation I (to homocysteine))31536-.4160



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11912   EG11909   EG11908   EG11906   
G79900.9987830.9988690.9990910.999359
EG119120.9996910.9997390.998567
EG119090.9997620.998516
EG119080.998826
EG11906



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PAIRWISE BLAST SCORES:

  G7990   EG11912   EG11909   EG11908   EG11906   
G79900.0f0----
EG11912-0.0f04.5e-16--
EG11909-5.3e-130.0f0--
EG11908---0.0f0-
EG11906----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX-160 (EIIBCFrw) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.400, average score: 0.972)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9988 EG11908 (frwC) FRWC-MONOMER (FrwC)
   *in cand* 0.9994 0.9985 EG11909 (frwB) FRWB-MONOMER (FrwB)
             0.9567 0.8852 EG10788 (ptsH) PTSH-MONOMER (HPr)
             0.9984 0.9972 EG10789 (ptsI) PTSI-MONOMER (PTS enzyme I)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9985 EG11906 (ptsA) EG11906-MONOMER (PEP-protein phosphotransferase system enzyme I)
   *in cand* 0.9994 0.9986 EG11912 (frwD) EG11912-MONOMER (PTS system fructose-like IIB component 2)
   *in cand* 0.9992 0.9988 G7990 (fruB) FRUB-MONOMER (FruB)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11906 EG11908 EG11909 (centered at EG11908)
G7990 (centered at G7990)
EG11912 (centered at EG11912)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7990   EG11912   EG11909   EG11908   EG11906   
248/623180/623181/623222/623281/623
AAUR290340:2:Tyes3488--0-
AAVE397945:0:Tyes2-002
ACAU438753:0:Tyes0----
ACRY349163:8:Tyes0--2-
ADEH290397:0:Tyes0----
AHYD196024:0:Tyes91400121585
ALAI441768:0:Tyes0----
AMET293826:0:Tyes3331000420
ANAE240017:0:Tyes---0-
APLE416269:0:Tyes2000982
APLE434271:0:Tno2000964
ASAL382245:5:Tyes5250021595
ASP1667:3:Tyes3742--0-
ASP232721:2:Tyes0----
ASP62977:0:Tyes02220
ASP76114:2:Tyes0----
BAFZ390236:2:Fyes-000157
BAMB339670:3:Tno----0
BAMB398577:3:Tno----0
BAMY326423:0:Tyes0199419941994943
BANT260799:0:Tno392-00391
BANT261594:2:Tno404-00403
BANT568206:2:Tyes3443-003442
BANT592021:2:Tno413-00412
BAPH198804:0:Tyes485---0
BBUR224326:21:Fno-000142
BCEN331271:2:Tno----0
BCEN331272:3:Tyes----0
BCER226900:1:Tyes324-00323
BCER288681:0:Tno328-00327
BCER315749:1:Tyes14870001486
BCER405917:1:Tyes358-00357
BCER572264:1:Tno11202120212020
BCIC186490:0:Tyes----0
BCLA66692:0:Tyes2520004132252
BGAR290434:2:Fyes-000-
BHAL272558:0:Tyes3063-002283
BHEN283166:0:Tyes0----
BHER314723:0:Fyes-000159
BLIC279010:0:Tyes04924924921
BLON206672:0:Tyes----0
BMAL243160:1:Tno----0
BMAL320388:1:Tno----0
BMAL320389:1:Tyes----0
BPET94624:0:Tyes----0
BPSE272560:1:Tyes----0
BPSE320372:1:Tno----0
BPSE320373:1:Tno----0
BPUM315750:0:Tyes148-011441089
BQUI283165:0:Tyes0----
BSP107806:2:Tyes500---0
BSP36773:2:Tyes----0
BSUB:0:Tyes08588588581068
BTHA271848:0:Tno0--2-
BTHA271848:1:Tno----0
BTHU281309:1:Tno327-00326
BTHU412694:1:Tno11076107610760
BTRI382640:1:Tyes0----
BTUR314724:0:Fyes-000157
BVIE269482:7:Tyes----0
BWEI315730:4:Tyes391-00390
CACE272562:1:Tyes07979792948
CAULO:0:Tyes----0
CBEI290402:0:Tyes48-1629-0
CBLO203907:0:Tyes----0
CBLO291272:0:Tno0---1
CBOT36826:1:Tno4060001443
CBOT441770:0:Tyes3230001505
CBOT441771:0:Tno2970001368
CBOT441772:1:Tno3800001479
CBOT498213:1:Tno3840001524
CBOT508765:1:Tyes---19590
CBOT515621:2:Tyes4170001490
CBOT536232:0:Tno4690001618
CDIF272563:1:Tyes21732859102596
CEFF196164:0:Fyes---0-
CGLU196627:0:Tyes---0-
CKLU431943:1:Tyes----0
CMIC31964:2:Tyes185--0-
CMIC443906:2:Tyes257--0-
CNOV386415:0:Tyes----0
CPER195102:1:Tyes10910-01832
CPER195103:0:Tno13400-02030
CPER289380:3:Tyes10770-01739
CPHY357809:0:Tyes----0
CSAL290398:0:Tyes20002
CSP78:2:Tyes----0
CTET212717:0:Tyes----0
CVIO243365:0:Tyes7521102
DDES207559:0:Tyes----0
DGEO319795:0:Tyes----0
DGEO319795:1:Tyes0-22-
DNOD246195:0:Tyes4824824824820
DRAD243230:1:Tyes-000-
DRED349161:0:Tyes----0
DVUL882:1:Tyes----0
ECAR218491:0:Tyes2395002393547
ECOL199310:0:Tno02176217221712170
ECOL316407:0:Tno01140114311441145
ECOL331111:6:Tno01945194219411940
ECOL362663:0:Tno01949194619451944
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ECOL405955:2:Tyes0189815941894239
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ECOL413997:0:Tno01769176617651764
ECOL439855:4:Tno02004200120001999
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ECOL585035:0:Tno02021201820172016
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EFAE226185:3:Tyes0249249249265
EFER585054:1:Tyes01549155215531554
ESP42895:1:Tyes2000190
FMAG334413:1:Tyes--2712710
FNUC190304:0:Tyes1--17770
FSP1855:0:Tyes0----
GBET391165:0:Tyes2-002
GKAU235909:1:Tyes963-8558550
GMET269799:1:Tyes0---1
GSUL243231:0:Tyes1---0
GTHE420246:1:Tyes947230423048320
GURA351605:0:Tyes61---0
HAUR316274:2:Tyes32063208320832080
HDUC233412:0:Tyes----0
HHAL349124:0:Tyes1250---0
HINF281310:0:Tyes20001296
HINF374930:0:Tyes0222472
HINF71421:0:Tno20001245
HMAR272569:7:Tyes14403
HMOD498761:0:Tyes0---1
HSOM205914:1:Tyes155---0
HSOM228400:0:Tno0---192
HWAL362976:1:Tyes----0
KPNE272620:2:Tyes03466346934703471
LACI272621:0:Tyes0---1
LBRE387344:2:Tyes----0
LCAS321967:1:Tyes1089--8670
LDEL321956:0:Tyes0---1
LDEL390333:0:Tyes0---1
LGAS324831:0:Tyes11620-01161
LHEL405566:0:Tyes0---1
LINN272626:1:Tno6211892070622
LJOH257314:0:Tyes525--0526
LLAC272622:5:Tyes0944-94472
LLAC272623:0:Tyes0936-93695
LMES203120:1:Tyes1---0
LMON169963:0:Tno01746205204579
LMON265669:0:Tyes0218218217575
LPLA220668:0:Tyes0-2754-897
LREU557436:0:Tyes917---0
LSAK314315:0:Tyes1---0
LSPH444177:1:Tyes1459---0
LWEL386043:0:Tyes387155610388
LXYL281090:0:Tyes0--447-
MCAP340047:0:Tyes-574--0
MEXT419610:0:Tyes0----
MFLO265311:0:Tyes4050--358
MGEN243273:0:Tyes--0-378
MGIL350054:3:Tyes471--0-
MHYO262719:0:Tyes----0
MHYO262722:0:Tno----0
MHYO295358:0:Tno----0
MMAG342108:0:Tyes----0
MMOB267748:0:Tyes0----
MMYC272632:0:Tyes571574--0
MPEN272633:0:Tyes----0
MPNE272634:0:Tyes-0--590
MPUL272635:0:Tyes----0
MSME246196:0:Tyes--00-
MSP164756:1:Tno--00-
MSP164757:0:Tno--00-
MSP189918:2:Tyes--00-
MSP266779:3:Tyes0----
MSP400668:0:Tyes----0
MSP409:2:Tyes0---3043
MSUC221988:0:Tyes6886866866860
MSYN262723:0:Tyes0---135
MTHE264732:0:Tyes20003
MVAN350058:0:Tyes5459--0-
NFAR247156:2:Tyes-000-
NMUL323848:3:Tyes----0
NSP35761:1:Tyes0-2020-
OANT439375:4:Tyes----0
OCAR504832:0:Tyes----0
OIHE221109:0:Tyes1792-001622
PACN267747:0:Tyes0130513051305-
PAER208963:0:Tyes02220
PAER208964:0:Tno20002
PCAR338963:0:Tyes0---383
PENT384676:0:Tyes02220
PFLU205922:0:Tyes02220
PFLU216595:1:Tyes02224071
PFLU220664:0:Tyes02224014
PING357804:0:Tyes1063-106510650
PLUM243265:0:Fyes6226236236230
PMEN399739:0:Tyes02-20
PMUL272843:1:Tyes900898898-0
PPEN278197:0:Tyes44709690448
PPRO298386:2:Tyes7111849184911890
PPUT160488:0:Tno02220
PPUT351746:0:Tyes02220
PPUT76869:0:Tno02220
PSP117:0:Tyes----0
PSTU379731:0:Tyes02220
PSYR205918:0:Tyes02220
PSYR223283:2:Tyes02220
RALB246199:0:Tyes----0
RCAS383372:0:Tyes----0
REUT381666:2:Tyes----0
RRUB269796:1:Tyes2--0-
RSAL288705:0:Tyes---0-
RSOL267608:0:Tyes----0
RSOL267608:1:Tyes02-2-
RSP101510:3:Fyes---0-
RSP357808:0:Tyes----0
RSPH272943:4:Tyes0-220
RSPH349101:2:Tno0-220
RSPH349102:5:Tyes0--20
RXYL266117:0:Tyes1---0
SACI56780:0:Tyes----0
SAGA205921:0:Tno07977974211
SAGA208435:0:Tno05095095091
SAGA211110:0:Tyes0567-5671
SARE391037:0:Tyes0----
SAUR158878:1:Tno1505001996386
SAUR158879:1:Tno1411190701907297
SAUR196620:0:Tno1471195801958308
SAUR273036:0:Tno1395186801868295
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SAUR426430:0:Tno1436001926285
SAUR93061:0:Fno1654002209314
SAUR93062:1:Tno10311535153515350
SAVE227882:1:Fyes---0-
SBAL399599:3:Tyes----0
SBAL402882:1:Tno----0
SBOY300268:1:Tyes01727172417231722
SCO:2:Fyes---0-
SDYS300267:1:Tyes01365136213611359
SENT209261:0:Tno2162182182180
SENT220341:0:Tno2000657
SENT295319:0:Tno2092112112110
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SEPI176279:1:Tyes299001858300
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SERY405948:0:Tyes--00-
SFLE198214:0:Tyes0174017371736188
SFLE373384:0:Tno0169916961695192
SGLO343509:3:Tyes0---1740
SGOR29390:0:Tyes4340-0433
SHAE279808:0:Tyes02009200920091685
SHAL458817:0:Tyes----0
SHIGELLA:0:Tno0119912021203181
SLOI323850:0:Tyes----0
SMUT210007:0:Tyes99771100533
SONE211586:1:Tyes----0
SPEA398579:0:Tno----0
SPNE1313:0:Tyes0411-411676
SPNE170187:0:Tyes1830-0-
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SPNE487213:0:Tno04844842611
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SPNE488221:0:Tno011271127425714
SPRO399741:1:Tyes2000231
SPYO160490:0:Tno421000420
SPYO186103:0:Tno416000415
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SPYO198466:0:Tno467000466
SPYO286636:0:Tno417000416
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SPYO370552:0:Tno473000472
SPYO370553:0:Tno456000455
SPYO370554:0:Tyes4730-0472
SRUB309807:1:Tyes0----
SSAP342451:2:Tyes01334133413341020
SSON300269:1:Tyes0180324418011800
SSP94122:1:Tyes----0
SSUI391295:0:Tyes3770--376
SSUI391296:0:Tyes3900-0389
STHE264199:0:Tyes0---777
STHE292459:0:Tyes01112552
STHE299768:0:Tno1---0
STHE322159:2:Tyes1---0
STYP99287:1:Tyes01897189418931892
TPEN368408:1:Tyes0----
TPSE340099:0:Tyes15691102
TSP1755:0:Tyes0542542541543
TSP28240:0:Tyes12220
TTEN273068:0:Tyes02130213021301892
VCHO:0:Tyes-8528528510
VCHO:1:Fyes0----
VCHO345073:0:Tno0----
VCHO345073:1:Tno-9239239220
VFIS312309:1:Tyes230001-
VFIS312309:2:Tyes----0
VPAR223926:0:Tyes0615615614-
VPAR223926:1:Tyes----0
VVUL196600:1:Tyes525001-
VVUL196600:2:Tyes----0
VVUL216895:0:Tno0107210721073-
VVUL216895:1:Tno----0
XAXO190486:0:Tyes02-20
XCAM190485:0:Tyes02-20
XCAM314565:0:Tno20-02
XCAM316273:0:Tno02-20
XCAM487884:0:Tno20-02
XORY291331:0:Tno02-20
XORY342109:0:Tyes02-20
XORY360094:0:Tno40-04
YENT393305:1:Tyes2402422422420
YPES187410:5:Tno0907906904903
YPES214092:3:Tno8650123
YPES349746:2:Tno6443210
YPES360102:3:Tyes02909290829072906
YPES377628:2:Tno24450123
YPES386656:2:Tno0837836835834
YPSE273123:2:Tno8100123
YPSE349747:2:Tno0839838837836



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