CANDIDATE ID: 553

CANDIDATE ID: 553

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9873700e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7800 (rffT) (b4404 (obsolete))
   Products of gene:
     - G7800-MONOMER (4-acetamido-4,6-dideoxy-D-galactose transferase)
       Reactions:
        undecaprenyl N-acetyl-glucosaminyl-N-acetyl-mannosaminuronate pyrophosphate + dTDP-4-acetamido-4,6-dideoxy-D-galactose  ->  undecaprenyl N-acetyl-glucosaminyl-N-acetyl-mannosaminuronate-4-acetamido-4,6-dideoxy-D-galactose pyrophosphate + dTDP + H+
         In pathways
         ECASYN-PWY (enterobacterial common antigen biosynthesis)

- EG11486 (wzxE) (b3792)
   Products of gene:
     - EG11486-MONOMER (lipid III flippase)
       Reactions:
        undecaprenyl N-acetyl-glucosaminyl-N-acetyl-mannosaminuronate-4-acetamido-4,6-dideoxy-D-galactose pyrophosphate[cytosol]  ->  undecaprenyl N-acetyl-glucosaminyl-N-acetyl-mannosaminuronate-4-acetamido-4,6-dideoxy-D-galactose pyrophosphate[periplasmic space]
     - CPLX0-3976 (Enterobacterial Common Antigen Biosynthesis Protein Complex)

- EG11457 (wzyE) (b3793)
   Products of gene:
     - FUC4NACTRANS-MONOMER (predicted Wzy protein involved in ECA polysaccharide chain elongation)
     - CPLX0-3976 (Enterobacterial Common Antigen Biosynthesis Protein Complex)

- EG11456 (rffA) (b3791)
   Products of gene:
     - RFFTRANS-MONOMER (dTDP-4-oxo-6-deoxy-D-glucose transaminase)
       Reactions:
        dTDP-4-dehydro-6-deoxy-D-glucose + L-glutamate  =  dTDP-D-fucosamine + 2-oxoglutarate
         In pathways
         ECASYN-PWY (enterobacterial common antigen biosynthesis)

- EG11455 (rffC) (b3790)
   Products of gene:
     - TDPFUCACTRANS-MONOMER (dTDP-fucosamine acetyltransferase)
       Reactions:
        dTDP-D-fucosamine + acetyl-CoA  ->  dTDP-4-acetamido-4,6-dideoxy-D-galactose + coenzyme A + H+
         In pathways
         ECASYN-PWY (enterobacterial common antigen biosynthesis)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 49
Effective number of orgs (counting one per cluster within 468 clusters): 17

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
SSON300269 ncbi Shigella sonnei Ss0465
SPRO399741 ncbi Serratia proteamaculans 5685
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SBOY300268 ncbi Shigella boydii Sb2275
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205


Names of the homologs of the genes in the group in each of these orgs
  G7800   EG11486   EG11457   EG11456   EG11455   
YPSE349747 YPSIP31758_0191YPSIP31758_0190YPSIP31758_0192YPSIP31758_0189YPSIP31758_0188
YPSE273123 YPTB0177YPTB0176YPTB0178YPTB0175YPTB0174
YPES386656 YPDSF_3475YPDSF_3476YPDSF_3474YPDSF_3477YPDSF_3478
YPES377628 YPN_0106YPN_0105YPN_0107YPN_0104YPN_0103
YPES360102 YPA_0161YPA_0160YPA_0162YPA_0159YPA_0158
YPES349746 YPANGOLA_A0521YPANGOLA_A0520YPANGOLA_A0522YPANGOLA_A0519YPANGOLA_A0518
YPES214092 YPO3857YPO3858YPO3856YPO3859YPO3860
YPES187410 Y0371Y0370Y0372Y0369Y0368
YENT393305 YE0178YE0177YE0179YE0176YE0175
STYP99287 STM3927STM3926STM3928STM3925STM3924
SSON300269 SSO_3965SSO_3964SSO_3966SSO_3963SSO_3962
SPRO399741 SPRO_0170SPRO_0169SPRO_0171SPRO_0168SPRO_0167
SHIGELLA YIFMWZXEWECFWECEWECD
SGLO343509 SG2376SG2377SG2375SG2378SG2379
SFLE373384 SFV_3711SFV_3712SFV_3710SFV_3713SFV_3714
SFLE198214 AAN45304.1AAN45303.1AAN45305.1AAN45302.1AAN45301.1
SENT454169 SEHA_C4256SEHA_C4255SEHA_C4257SEHA_C4254SEHA_C4253
SENT321314 SCH_3832SCH_3831SCH_3833SCH_3830SCH_3829
SENT295319 SPA3767SPA3766SPA3768SPA3765SPA3764
SENT220341 STY3628STY3629STY3627STY3630STY3631
SENT209261 T3370T3371T3369T3372T3373
SDYS300267 SDY_3955SDY_3956SDY_3954SDY_3957SDY_3958
SBOY300268 SBO_3804SBO_3803SBO_3805SBO_3802SBO_3801
PLUM243265 PLU4653PLU4654PLU4652PLU4655PLU4656
KPNE272620 GKPORF_B3638GKPORF_B3637GKPORF_B3639GKPORF_B3636GKPORF_B3635
ESP42895 ENT638_3995ENT638_3996ENT638_3994ENT638_3997ENT638_3998
EFER585054 EFER_3711EFER_3712EFER_3710EFER_3713EFER_3714
ECOO157 Z5304WZXEWECFWECEWECD
ECOL83334 ECS4726ECS4725ECS4727ECS4724ECS4723
ECOL585397 ECED1_4478ECED1_4477ECED1_4479ECED1_4476ECED1_4475
ECOL585057 ECIAI39_2994ECIAI39_2995ECIAI39_2993ECIAI39_2996ECIAI39_2997
ECOL585056 ECUMN_4318ECUMN_4317ECUMN_4319ECUMN_4316ECUMN_4315
ECOL585055 EC55989_4265EC55989_4264EC55989_4266EC55989_4263EC55989_4262
ECOL585035 ECS88_4215ECS88_4214ECS88_4217ECS88_4213ECS88_4212
ECOL585034 ECIAI1_3980ECIAI1_3979ECIAI1_3981ECIAI1_3978ECIAI1_3977
ECOL481805 ECOLC_4210ECOLC_4211ECOLC_4209ECOLC_4212ECOLC_4213
ECOL469008 ECBD_4246ECBD_4247ECBD_4245ECBD_4248ECBD_4249
ECOL439855 ECSMS35_4157ECSMS35_4156ECSMS35_4158ECSMS35_4155ECSMS35_4154
ECOL413997 ECB_03671ECB_03670ECB_03672ECB_03669ECB_03668
ECOL409438 ECSE_4076ECSE_4075ECSE_4077ECSE_4074ECSE_4073
ECOL405955 APECO1_2682APECO1_2683APECO1_2681APECO1_2684APECO1_2685
ECOL364106 UTI89_C4350UTI89_C4349UTI89_C4351UTI89_C4347UTI89_C4346
ECOL362663 ECP_3984ECP_3983ECP_3985ECP_3982ECP_3981
ECOL331111 ECE24377A_4305ECE24377A_4304ECE24377A_4306ECE24377A_4302ECE24377A_4301
ECOL316407 ECK3785:JW5596:B4481ECK3784:JW3766:B3792ECK3786:JW3769:B3793ECK3783:JW3765:B3791ECK3782:JW5597:B3790
ECOL199310 C4714C4713C4715C4711C4710
ECAR218491 ECA4202ECA4203ECA4201ECA4204ECA4205
APLE434271 APJL_1573APJL_1576APJL_1572APJL_1577APJL_1578
APLE416269 APL_1545APL_1548APL_1544APL_1549APL_1550


Organism features enriched in list (features available for 47 out of the 49 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 1.047e-623112
Arrangment:Singles 0.000445434286
Disease:Bubonic_plague 2.020e-766
Disease:Dysentery 2.020e-766
Disease:Fibrinous_and_necrotizing_pleuropneumonia 0.006371822
Disease:Gastroenteritis 0.0000160713
Disease:Typhoid_fever 0.006371822
Disease:Urinary_tract_infection 0.001824334
GC_Content_Range4:40-60 1.108e-2147224
GC_Content_Range7:50-60 1.462e-1734107
Genome_Size_Range5:2-4 4.998e-72197
Genome_Size_Range5:4-6 2.760e-2245184
Genome_Size_Range9:2-3 0.00104952120
Genome_Size_Range9:4-5 1.488e-112796
Genome_Size_Range9:5-6 0.00002961888
Gram_Stain:Gram_Neg 3.371e-1146333
Habitat:Host-associated 0.008600224206
Habitat:Multiple 0.006192422178
Motility:No 7.005e-61151
Motility:Yes 0.000264533267
Optimal_temp.:28-30 0.001039147
Optimal_temp.:37 0.000390618106
Oxygen_Req:Facultative 4.122e-2246201
Pathogenic_in:Human 1.735e-734213
Pathogenic_in:No 1.562e-82226
Pathogenic_in:Porcine 0.006371822
Pathogenic_in:Rodent 0.001039147
Shape:Rod 4.346e-945347
Temp._range:Mesophilic 0.000413046473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 561
Effective number of orgs (counting one per cluster within 468 clusters): 442

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A1
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110181
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103311
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae1
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-101
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80041
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339131
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3061
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP60
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106331
VFIS312309 ncbi Vibrio fischeri ES1140
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
VCHO345073 ncbi Vibrio cholerae O3951
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169611
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB271
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.1
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252591
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSP292414 ncbi Ruegeria sp. TM10401
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB31
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SLAC55218 Ruegeria lacuscaerulensis0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63011
SDEN318161 ncbi Shewanella denitrificans OS2171
SDEG203122 ncbi Saccharophagus degradans 2-401
SCO ncbi Streptomyces coelicolor A3(2)0
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1951
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2051
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170291
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA10
RSOL267608 ncbi Ralstonia solanacearum GMI10001
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1181
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H161
REUT264198 ncbi Ralstonia eutropha JMP1341
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30000
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a1
PSTU379731 ncbi Pseudomonas stutzeri A15011
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PSP296591 ncbi Polaromonas sp. JS6660
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 230
PPUT76869 ncbi Pseudomonas putida GB-10
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPRO298386 ncbi Photobacterium profundum SS90
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ21
PMUL272843 ncbi Pasteurella multocida multocida Pm701
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PFLU220664 ncbi Pseudomonas fluorescens Pf-51
PFLU216595 ncbi Pseudomonas fluorescens SBW251
PFLU205922 ncbi Pseudomonas fluorescens Pf0-11
PENT384676 ncbi Pseudomonas entomophila L481
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PATL342610 ncbi Pseudoalteromonas atlantica T6c1
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER208964 ncbi Pseudomonas aeruginosa PAO11
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA141
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71201
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534421
NMEN272831 ncbi Neisseria meningitidis FAM181
NMEN122587 ncbi Neisseria meningitidis Z24911
NMEN122586 ncbi Neisseria meningitidis MC581
NHAM323097 ncbi Nitrobacter hamburgensis X141
NGON242231 ncbi Neisseria gonorrhoeae FA 10901
NFAR247156 ncbi Nocardia farcinica IFM 101521
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E1
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP409 Methylobacterium sp.1
MSP400668 ncbi Marinomonas sp. MWYL11
MSP266779 ncbi Chelativorans sp. BNC11
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM11
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MMAG342108 ncbi Magnetospirillum magneticum AMB-11
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath1
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans1
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GOXY290633 ncbi Gluconobacter oxydans 621H0
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1121
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25941
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-11
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124721
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CSP501479 Citreicella sp. SE450
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1111
CBUR360115 ncbi Coxiella burnetii RSA 3311
CBUR227377 ncbi Coxiella burnetii RSA 4931
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CAULO ncbi Caulobacter crescentus CB151
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BVIE269482 ncbi Burkholderia vietnamiensis G41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BTHA271848 ncbi Burkholderia thailandensis E2641
BSUI470137 ncbi Brucella suis ATCC 234451
BSUI204722 ncbi Brucella suis 13301
BSUB ncbi Bacillus subtilis subtilis 1681
BSP376 Bradyrhizobium sp.1
BSP36773 Burkholderia sp.1
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BPSE320373 ncbi Burkholderia pseudomallei 6681
BPSE320372 ncbi Burkholderia pseudomallei 1710b1
BPSE272560 ncbi Burkholderia pseudomallei K962431
BPET94624 Bordetella petrii1
BPER257313 ncbi Bordetella pertussis Tohama I1
BPAR257311 ncbi Bordetella parapertussis 128221
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M1
BMAL320389 ncbi Burkholderia mallei NCTC 102471
BMAL320388 ncbi Burkholderia mallei SAVP11
BMAL243160 ncbi Burkholderia mallei ATCC 233441
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BCEN331272 ncbi Burkholderia cenocepacia HI24241
BCEN331271 ncbi Burkholderia cenocepacia AU 10541
BCAN483179 ncbi Brucella canis ATCC 233651
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAMB398577 ncbi Burkholderia ambifaria MC40-61
BAMB339670 ncbi Burkholderia ambifaria AMMD1
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP11
ASP62928 ncbi Azoarcus sp. BH721
ASP232721 ncbi Acidovorax sp. JS421
ASP1667 Arthrobacter sp.0
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4491
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AHYD196024 Aeromonas hydrophila dhakensis1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232701
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-11
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK21
ABAU360910 ncbi Bordetella avium 197N1
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451
AAVE397945 ncbi Acidovorax citrulli AAC00-11
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7800   EG11486   EG11457   EG11456   EG11455   
ZMOB264203
XORY360094 XOOORF_1675
XORY342109 XOO2844
XORY291331 XOO2993
XFAS405440
XFAS183190
XFAS160492
XCAM487884 XCC-B100_2587
XCAM316273 XCAORF_1908
XCAM314565 XC_2559
XCAM190485 XCC1672
XAXO190486 XAC1692
XAUT78245
WSUC273121 WS2186
WPIP955
WPIP80849
VVUL216895
VPAR223926 VP0234
VFIS312309
VEIS391735
VCHO345073 VC0395_A2624
VCHO VC0244
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX1921
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724 TT_C0284
TTEN273068 TTE0651
TSP28240 TRQ2_0364
TSP1755
TROS309801
TPSE340099
TPET390874 TPET_0346
TPEN368408 TPEN_0110
TPAL243276
TLET416591
TKOD69014
TFUS269800
TERY203124 TERY_2511
TELO197221 TLR1344
TDEN326298 TMDEN_0902
TDEN292415 TBD_1879
TDEN243275
TCRU317025
TACI273075
SWOL335541 SWOL_0703
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP94122 SHEWANA3_1303
SSP84588 SYNW0220OR2287
SSP64471 GSYN0269
SSP644076
SSP387093 SUN_1549
SSP321332 CYB_1979
SSP321327 CYA_2266
SSP292414 TM1040_3423
SSP1148 SLR1615
SSP1131 SYNCC9605_0214
SSOL273057
SSED425104 SSED_0926
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579 SPEA_1413
SONE211586 SO_2476
SMUT210007
SMEL266834
SMAR399550
SLOI323850 SHEW_1858
SLAC55218
SHAL458817
SHAE279808
SGOR29390
SFUM335543 SFUM_0794
SERY405948 SACE_0734
SEPI176280
SEPI176279
SELO269084 SYC1444_D
SDEN318161 SDEN_1287
SDEG203122 SDE_2128
SCO
SBAL402882
SBAL399599 SBAL195_3025
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037 SARE_2337
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780 SYN_01128
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101 RSPH17029_3689
RSPH272943
RSP357808 ROSERS_4428
RSP101510
RSOL267608 RSC1322
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056
RPAL316055 RPE_4252
RPAL258594 RPA3350
RMET266264 RMET_4589
RMAS416276
RFER338969 RFER_0689
RFEL315456
REUT381666 H16_B1639
REUT264198 REUT_B3977
RDEN375451 RD1_0568
RCON272944
RCAS383372 RCAS_0781
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_2574
PSYR223283
PSYR205918 PSYR_2689
PSTU379731 PST_3839
PSP56811 PSYCPRWF_0245
PSP312153 PNUC_0312
PSP296591
PSP117 RB1170
PRUM264731
PPUT76869
PPUT351746
PPUT160488
PPRO298386
PPEN278197
PNAP365044 PNAP_3118
PMUL272843 PM1014
PMOB403833
PMEN399739
PMAR93060 P9215_03091
PMAR74547 PMT0096
PMAR74546
PMAR59920 PMN2A_1650
PMAR167555 NATL1_03641
PMAR167546
PMAR167542
PMAR167540 PMM1258
PMAR167539 PRO_0316
PMAR146891
PLUT319225
PISL384616 PISL_1846
PINT246198
PING357804
PHOR70601
PHAL326442
PGIN242619 PG_1138
PFUR186497 PF0767
PFLU220664 PFL_3043
PFLU216595 PFLU5872
PFLU205922 PFL_2841
PENT384676 PSEEN0254
PDIS435591 BDI_3621
PCRY335284 PCRYO_0618
PCAR338963 PCAR_1141
PATL342610 PATL_3059
PAST100379
PARS340102 PARS_2093
PARC259536 PSYC_0654
PAER208964 PA3552
PAER208963 PA14_18370
PAER178306 PAE2053
PACN267747 PPA0135
PABY272844 PAB0774
OTSU357244
OIHE221109 OB2416
OCAR504832
OANT439375
NWIN323098 NWI_0642
NSP387092 NIS_1315
NSP35761
NSP103690 ALR3012
NSEN222891
NPHA348780
NOCE323261
NMUL323848 NMUL_A0288
NMEN374833 NMCC_0404
NMEN272831 NMC0397
NMEN122587 NMA0638
NMEN122586 NMB_1821
NHAM323097 NHAM_3037
NGON242231 NGO0084
NFAR247156 NFA19820
NEUT335283
NEUR228410 NE2167
NARO279238
MXAN246197
MVAN350058
MTUB419947 MRA_1515
MTUB336982 TBFG_11535
MTHE349307 MTHE_1460
MTHE264732 MOTH_0752
MTHE187420 MTH334
MTBRV RV1504C
MTBCDC
MSYN262723
MSUC221988 MS1498
MSTA339860 MSP_0290
MSP409 M446_1623
MSP400668 MMWYL1_0832
MSP266779 MESO_2584
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPET420662 MPE_A0607
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM1152
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407 MEMAR_2233
MMAR267377 MMP0351
MMAG342108 AMB0127
MLOT266835
MLEP272631
MLAB410358
MKAN190192 MK0156
MJAN243232 MJ_1066
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_3108
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233 MCA_2125
MBUR259564 MBUR_0121
MBOV410289 BCG_1567C
MBOV233413 MB1542C
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447 MAE_25010
MAEO419665 MAEO_0427
MACE188937 MA2180
MABS561007
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668 LP_0486
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253 LIB010
LINT189518 LA2952
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LBOR355277 LBJ_1136
LBOR355276 LBL_1190
LBIF456481
LBIF355278
LACI272621
KRAD266940
JSP375286
JSP290400
ILOI283942 IL0545
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032 HNE_2243
HMUK485914 HMUK_1470
HMOD498761 HM1_1258
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HCHE349521
HBUT415426
HAUR316274
HARS204773 HEAR1121
HACI382638
GVIO251221 GLR1861
GTHE420246
GSUL243231 GSU_2262
GOXY290633
GKAU235909 GK3168
GFOR411154 GFO_0550
GBET391165
FTUL458234
FTUL418136
FTUL401614 FTN_1420
FTUL393115
FTUL393011
FTUL351581
FSP1855
FSP106370
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413 FMG_0582
FJOH376686 FJOH_1727
FALN326424
ERUM302409
ERUM254945
ELIT314225 ELI_13355
EFAE226185
ECHA205920
ECAN269484
DVUL882 DVU_3010
DSP255470
DSP216389
DSHI398580
DRED349161 DRED_3134
DRAD243230
DPSY177439 DP0028
DOLE96561 DOLE_2465
DNOD246195
DHAF138119 DSY3335
DGEO319795
DETH243164
DDES207559 DDE_1131
DARO159087
CVIO243365 CV_4118
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP78
CSP501479
CSAL290398
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415 NT01CX_1789
CMUR243161
CMIC443906
CMIC31964
CMET456442 MBOO_1834
CMAQ397948 CMAQ_1039
CKOR374847 KCR_1162
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHYD246194
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CDES477974 DAUD_1770
CCUR360105
CCON360104 CCC13826_0537
CCHL340177
CCAV227941
CBUR434922 COXBU7E912_0895
CBUR360115 COXBURSA331_A1120
CBUR227377 CBU_0830
CBOT536232 CLM_3081
CBOT515621
CBOT508765 CLL_A3243
CBOT498213 CLD_1860
CBOT441772 CLI_2769
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402 CBEI_4711
CAULO CC1012
CACE272562
CABO218497
BXEN266265
BWEI315730 BCERKBAB4_5668
BVIE269482 BCEP1808_1786
BTUR314724
BTRI382640
BTHU412694
BTHU281309
BTHE226186
BTHA271848 BTH_I2193
BSUI470137 BSUIS_A0552
BSUI204722 BR_0521
BSUB BSU37890
BSP376 BRADO5187
BSP36773 BCEP18194_A3334
BSP107806
BQUI283165
BPUM315750 BPUM_3434
BPSE320373 BURPS668_2237
BPSE320372 BURPS1710B_A2603
BPSE272560 BPSL1472
BPET94624 BPET4818
BPER257313 BP0091
BPAR257311 BPP0150
BOVI236
BMEL359391 BAB1_0544
BMEL224914 BMEI1414
BMAL320389 BMA10247_1152
BMAL320388 BMASAVP1_A1880
BMAL243160 BMA_1390
BLON206672
BLIC279010 BL03075
BJAP224911 BLR5429
BHER314723
BHEN283166
BHAL272558
BGAR290434
BFRA295405 BF3658
BFRA272559 BF0734
BCLA66692
BCIC186490
BCER572264
BCER405917
BCER315749
BCER288681
BCER226900
BCEN331272 BCEN2424_1859
BCEN331271 BCEN_6220
BCAN483179 BCAN_A0533
BBUR224326
BBRO257310 BB0150
BBAC360095
BBAC264462 BD1871
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423 RBAM_035140
BAMB398577 BAMMC406_0156
BAMB339670 BAMB_0143
BAFZ390236
BABO262698 BRUAB1_0544
AYEL322098
AVAR240292 AVA_0899
AURANTIMONAS
ASP76114
ASP62977 ACIAD0095
ASP62928 AZO2675
ASP232721 AJS_3018
ASP1667
ASAL382245 ASA_3307
APHA212042
APER272557
AORE350688 CLOS_2514
ANAE240017
AMET293826 AMET_3438
AMAR329726 AM1_4475
AMAR234826
ALAI441768
AHYD196024 AHA_0992
AFUL224325
AFER243159 AFE_1626
AEHR187272 MLG_0663
ADEH290397 ADEH_3061
ACRY349163 ACRY_0289
ACEL351607 ACEL_1934
ACAU438753
ABUT367737
ABOR393595 ABO_0927
ABAU360910 BAV0096
ABAC204669 ACID345_3300
AAVE397945 AAVE_4406
AAUR290340
AAEO224324


Organism features enriched in list (features available for 523 out of the 561 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000043988112
Arrangment:Singles 0.0001064243286
Disease:Gastroenteritis 6.488e-6513
Disease:urinary_tract_infection 0.003756614
Endospores:Yes 0.00236785353
GC_Content_Range4:0-40 2.238e-9210213
GC_Content_Range4:40-60 4.561e-16172224
GC_Content_Range4:60-100 0.0001169141145
GC_Content_Range7:0-30 0.00484434747
GC_Content_Range7:30-40 1.650e-6163166
GC_Content_Range7:50-60 1.430e-1570107
GC_Content_Range7:60-70 0.0003744130134
Genome_Size_Range5:0-2 8.267e-7153155
Genome_Size_Range5:2-4 2.409e-8194197
Genome_Size_Range5:4-6 8.134e-21132184
Genome_Size_Range9:1-2 0.0000252126128
Genome_Size_Range9:2-3 0.0000650118120
Genome_Size_Range9:3-4 0.00127827677
Genome_Size_Range9:4-5 1.745e-126496
Genome_Size_Range9:5-6 0.00010076888
Gram_Stain:Gram_Neg 5.219e-12276333
Gram_Stain:Gram_Pos 5.653e-9150150
Habitat:Aquatic 0.00628948891
Habitat:Host-associated 0.0053189176206
Motility:No 0.0000108148151
Motility:Yes 0.0003157227267
Optimal_temp.:28-30 0.000170227
Optimal_temp.:37 0.001359086106
Oxygen_Req:Aerobic 0.0000282179185
Oxygen_Req:Anaerobic 0.007502898102
Oxygen_Req:Facultative 2.389e-14153201
Pathogenic_in:Human 0.0000559177213
Pathogenic_in:No 0.0002133215226
Pathogenic_in:Rodent 0.002638837
Shape:Coccus 0.00006568282
Shape:Rod 5.792e-9292347
Temp._range:Mesophilic 0.0002047415473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45360.7477
GALACTITOLCAT-PWY (galactitol degradation)73440.7093
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50340.6599
RHAMCAT-PWY (rhamnose degradation)91440.6220
PWY0-1355 (formate to trimethylamine N-oxide electron transfer)31250.6187
LYXMET-PWY (L-lyxose degradation)87400.5704
PWY0-1356 (formate to dimethyl sulfoxide electron transfer)22190.5579
HEXITOLDEGSUPER-PWY (superpathway of hexitol degradation)37250.5573
SORBDEG-PWY (sorbitol degradation II)53300.5521
FUC-RHAMCAT-PWY (superpathway of fucose and rhamnose degradation)19170.5377
ARABCAT-PWY (L-arabinose degradation I)128460.5303
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121440.5198
PWY0-1182 (trehalose degradation II (trehalase))70330.5191
PWY-5833 (CDP-3,6-dideoxyhexose biosynthesis)14140.5189
MANNIDEG-PWY (mannitol degradation I)99380.4928
PWY-6507 (5-dehydro-4-deoxy-D-glucuronate degradation)76330.4923
GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation)134440.4856
PWY0-1324 (N-acetylneuraminate and N-acetylmannosamine degradation)135440.4831
P441-PWY (superpathway of N-acetylneuraminate degradation)63290.4755
PWY0-41 (allantoin degradation IV (anaerobic))29190.4732
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)176490.4656
PWY-46 (putrescine biosynthesis III)138430.4616
LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)91330.4363
GLUTDEG-PWY (glutamate degradation II)194490.4345
PWY0-1277 (3-phenylpropionate and 3-(3-hydroxyphenyl)propionate degradation)19140.4337
KETOGLUCONMET-PWY (ketogluconate metabolism)103350.4318
HCAMHPDEG-PWY (3-phenylpropionate and 3-(3-hydroxyphenyl)propionate degradation to 2-oxopent-4-enoate)22150.4287
ECASYN-PWY (enterobacterial common antigen biosynthesis)191480.4265
LACTOSEUTIL-PWY (lactose degradation II)53240.4239
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112360.4222
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96330.4203
PWY-6196 (serine racemization)102340.4186
PWY-6374 (vibriobactin biosynthesis)77290.4157
PWY0-301 (L-ascorbate degradation, anaerobic)84300.4084
PWY0-981 (taurine degradation IV)106340.4072
GLUTSYNIII-PWY (glutamate biosynthesis III)181450.4040
GLUCARDEG-PWY (D-glucarate degradation I)152410.4032
GLUCUROCAT-PWY (β-D-glucuronide and D-glucuronate degradation)208480.4001



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11486   EG11457   EG11456   EG11455   
G78000.9988410.9988510.9986890.998578
EG114860.9986890.9988720.998697
EG114570.9986430.998554
EG114560.998956
EG11455



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PAIRWISE BLAST SCORES:

  G7800   EG11486   EG11457   EG11456   EG11455   
G78000.0f0----
EG11486-0.0f0---
EG11457--0.0f0--
EG11456---0.0f0-
EG11455----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-3976 (Enterobacterial Common Antigen Biosynthesis Protein Complex) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.400, average score: 0.998)
  Genes in pathway or complex:
             0.9982 0.9980 EG11295 (wzzE) EG11295-MONOMER (Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein)
   *in cand* 0.9989 0.9986 EG11457 (wzyE) FUC4NACTRANS-MONOMER (predicted Wzy protein involved in ECA polysaccharide chain elongation)
   *in cand* 0.9990 0.9987 EG11486 (wzxE) EG11486-MONOMER (lipid III flippase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9990 0.9986 EG11455 (rffC) TDPFUCACTRANS-MONOMER (dTDP-fucosamine acetyltransferase)
   *in cand* 0.9990 0.9986 EG11456 (rffA) RFFTRANS-MONOMER (dTDP-4-oxo-6-deoxy-D-glucose transaminase)
   *in cand* 0.9990 0.9986 G7800 (rffT) G7800-MONOMER (4-acetamido-4,6-dideoxy-D-galactose transferase)

- ECASYN-PWY (enterobacterial common antigen biosynthesis) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.600, average score: 0.998)
  Genes in pathway or complex:
             0.9983 0.9981 EG10840 (rfe) GLCNACPTRANS-MONOMER (undecaprenyl-phosphate α-N-acetylglucosaminyl transferase)
             0.9986 0.9983 EG11458 (rffM) UDPMANACATRANS-MONOMER (UDP-N-acetyl-D-mannosaminuronic acid transferase)
             0.9986 0.9984 EG11452 (rffD) UDPMANNACADEHYDROG-MONOMER (UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase)
   *in cand* 0.9990 0.9986 G7800 (rffT) G7800-MONOMER (4-acetamido-4,6-dideoxy-D-galactose transferase)
   *in cand* 0.9990 0.9986 EG11455 (rffC) TDPFUCACTRANS-MONOMER (dTDP-fucosamine acetyltransferase)
             0.9984 0.9982 EG11451 (rffE) UDPGLCNACEPIM-MONOMER (UDP-N-acetylglucosamine-2-epimerase)
   *in cand* 0.9990 0.9986 EG11456 (rffA) RFFTRANS-MONOMER (dTDP-4-oxo-6-deoxy-D-glucose transaminase)
             0.9981 0.9975 EG11454 (rffH) DTDPGLUCOSEPP2-MONOMER (dTDP-glucose pyrophosphorylase 2)
             0.9980 0.9974 EG11453 (rffG) DTDPGLUCDEHYDRAT2-MONOMER (dTDP-glucose 4,6-dehydratase 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9989 0.9986 EG11457 (wzyE) FUC4NACTRANS-MONOMER (predicted Wzy protein involved in ECA polysaccharide chain elongation)
   *in cand* 0.9990 0.9987 EG11486 (wzxE) EG11486-MONOMER (lipid III flippase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11455 EG11456 EG11457 EG11486 G7800 (centered at EG11486)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7800   EG11486   EG11457   EG11456   EG11455   
50/62374/62351/623265/62352/623
AAVE397945:0:Tyes---0-
ABAC204669:0:Tyes---0-
ABAU360910:0:Tyes---0-
ABOR393595:0:Tyes---0-
ACEL351607:0:Tyes---0-
ACRY349163:8:Tyes---0-
ADEH290397:0:Tyes---0-
AEHR187272:0:Tyes---0-
AFER243159:0:Tyes---0-
AHYD196024:0:Tyes---0-
AMAR329726:9:Tyes---0-
AMET293826:0:Tyes---0-
AORE350688:0:Tyes---0-
APLE416269:0:Tyes14056
APLE434271:0:Tno14056
ASAL382245:5:Tyes---0-
ASP232721:2:Tyes---0-
ASP62928:0:Tyes---0-
ASP62977:0:Tyes---0-
AVAR240292:3:Tyes---0-
BABO262698:1:Tno---0-
BAMB339670:3:Tno---0-
BAMB398577:3:Tno---0-
BAMY326423:0:Tyes---0-
BBAC264462:0:Tyes---0-
BBRO257310:0:Tyes---0-
BCAN483179:1:Tno---0-
BCEN331271:0:Tno---0-
BCEN331272:3:Tyes---0-
BFRA272559:1:Tyes---0-
BFRA295405:0:Tno-0---
BJAP224911:0:Fyes---0-
BLIC279010:0:Tyes---0-
BMAL243160:1:Tno---0-
BMAL320388:1:Tno---0-
BMAL320389:1:Tyes---0-
BMEL224914:1:Tno---0-
BMEL359391:1:Tno---0-
BPAR257311:0:Tno---0-
BPER257313:0:Tyes---0-
BPET94624:0:Tyes---0-
BPSE272560:1:Tyes---0-
BPSE320372:1:Tno---0-
BPSE320373:1:Tno---0-
BPUM315750:0:Tyes---0-
BSP36773:2:Tyes---0-
BSP376:0:Tyes---0-
BSUB:0:Tyes---0-
BSUI204722:1:Tyes---0-
BSUI470137:1:Tno---0-
BTHA271848:1:Tno---0-
BVIE269482:7:Tyes---0-
BWEI315730:3:Tyes---0-
CAULO:0:Tyes---0-
CBEI290402:0:Tyes---0-
CBOT441772:1:Tno---0-
CBOT498213:1:Tno---0-
CBOT508765:1:Tyes---0-
CBOT536232:0:Tno---0-
CBUR227377:1:Tyes---0-
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