CANDIDATE ID: 557

CANDIDATE ID: 557

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9960500e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    8.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6401 (ybhJ) (b0771)
   Products of gene:
     - G6401-MONOMER (predicted hydratase)

- EG11577 (leuB) (b0073)
   Products of gene:
     - 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
     - 3-ISOPROPYLMALDEHYDROG-CPLX (3-isopropylmalate dehydrogenase)
       Reactions:
        (2R,3S)-3-isopropylmalate + NAD+  =  (2S)-2-isopropyl-3-oxosuccinate + NADH + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG11576 (leuC) (b0072)
   Products of gene:
     - LEUC-MONOMER (LeuC)
     - 3-ISOPROPYLMALISOM-CPLX (isopropylmalate isomerase)
       Reactions:
        2-isopropylmaleate + H2O  ->  (2R,3S)-3-isopropylmalate
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)
        (2S)-2-isopropylmalate  =  2-isopropylmaleate + H2O
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG11575 (leuD) (b0071)
   Products of gene:
     - LEUD-MONOMER (LeuD)
     - 3-ISOPROPYLMALISOM-CPLX (isopropylmalate isomerase)
       Reactions:
        2-isopropylmaleate + H2O  ->  (2R,3S)-3-isopropylmalate
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)
        (2S)-2-isopropylmalate  =  2-isopropylmaleate + H2O
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG11226 (leuA) (b0074)
   Products of gene:
     - 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
       Reactions:
        2-oxoisovalerate + acetyl-CoA + H2O  ->  (2S)-2-isopropylmalate + coenzyme A + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 300
Effective number of orgs (counting one per cluster within 468 clusters): 213

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM45
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTHE300852 ncbi Thermus thermophilus HB85
TTHE262724 ncbi Thermus thermophilus HB275
TFUS269800 ncbi Thermobifida fusca YX4
TELO197221 ncbi Thermosynechococcus elongatus BP-14
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE322159 ncbi Streptococcus thermophilus LMD-95
STHE299768 ncbi Streptococcus thermophilus CNRZ10665
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
STHE264199 ncbi Streptococcus thermophilus LMG 183115
SSUI391296 ncbi Streptococcus suis 98HAH335
SSUI391295 ncbi Streptococcus suis 05ZYH335
SSP94122 ncbi Shewanella sp. ANA-34
SSP84588 ncbi Synechococcus sp. WH 81024
SSP64471 ncbi Synechococcus sp. CC93114
SSP644076 Silicibacter sp. TrichCH4B4
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP292414 ncbi Ruegeria sp. TM10404
SSP1148 ncbi Synechocystis sp. PCC 68034
SSP1131 Synechococcus sp. CC96054
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SRUB309807 ncbi Salinibacter ruber DSM 138555
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMUT210007 ncbi Streptococcus mutans UA1595
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGOR29390 Streptococcus gordonii Challis5
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSP357808 ncbi Roseiflexus sp. RS-15
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
RCAS383372 ncbi Roseiflexus castenholzii DSM 139415
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PSP117 Pirellula sp.5
PRUM264731 ncbi Prevotella ruminicola 234
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp4
PMAR74547 ncbi Prochlorococcus marinus MIT 93134
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PDIS435591 ncbi Parabacteroides distasonis ATCC 85035
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM54
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP103690 ncbi Nostoc sp. PCC 71204
NPHA348780 ncbi Natronomonas pharaonis DSM 21604
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
MAER449447 ncbi Microcystis aeruginosa NIES-8434
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53344
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82934
LLAC272623 ncbi Lactococcus lactis lactis Il14034
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1305
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566015
LINN272626 ncbi Listeria innocua Clip112624
LCHO395495 ncbi Leptothrix cholodnii SP-64
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1975
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5505
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)5
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)5
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS14
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HNEP81032 Hyphomonas neptunium4
HMUK485914 ncbi Halomicrobium mukohataei DSM 122864
HMAR272569 ncbi Haloarcula marismortui ATCC 430494
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL14
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74215
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GOXY290633 ncbi Gluconobacter oxydans 621H4
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GFOR411154 ncbi Gramella forsetii KT08035
GBET391165 ncbi Granulibacter bethesdensis CGDNIH15
FTUL401614 ncbi Francisella novicida U1124
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S855
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FJOH376686 ncbi Flavobacterium johnsoniae UW1015
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS4
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10624
CJEJ407148 ncbi Campylobacter jejuni jejuni 811165
CJEJ360109 ncbi Campylobacter jejuni doylei 269.975
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1765
CJEJ195099 ncbi Campylobacter jejuni RM12215
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111685
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334065
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CBLO203907 ncbi Candidatus Blochmannia floridanus5
CAULO ncbi Caulobacter crescentus CB154
BXEN266265 ncbi Burkholderia xenovorans LB4004
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54825
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHAL272558 ncbi Bacillus halodurans C-1255
BFRA295405 ncbi Bacteroides fragilis YCH465
BFRA272559 ncbi Bacteroides fragilis NCTC 93435
BCLA66692 ncbi Bacillus clausii KSM-K165
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BBRO257310 ncbi Bordetella bronchiseptica RB504
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  G6401   EG11577   EG11576   EG11575   EG11226   
ZMOB264203 ZMO0543ZMO0677ZMO0105ZMO0106ZMO1835
YPSE349747 YPSIP31758_3406YPSIP31758_3407YPSIP31758_3408YPSIP31758_3405
YPSE273123 YPTB0671YPTB0670YPTB0669YPTB0672
YPES386656 YPDSF_3107YPDSF_3108YPDSF_3109YPDSF_3106
YPES377628 YPN_0402YPN_0401YPN_0400YPN_0403
YPES360102 YPA_3565YPA_3566YPA_3567YPA_3564
YPES349746 YPANGOLA_A2937YPANGOLA_A2938YPANGOLA_A2939YPANGOLA_A2936
YPES214092 YPO0532YPO0531YPO0530YPO0533
YPES187410 Y3646Y3647Y3648Y3645
YENT393305 YE0652YE0653YE0652YE0651YE0654
XORY360094 XOOORF_4518XOOORF_4464XOOORF_4467XOOORF_4466XOOORF_4462
XORY342109 XOO0819XOO0860XOO0857XOO0858XOO0861
XORY291331 XOO0894XOO0940XOO0936XOO0937XOO0941
XFAS405440 XFASM12_0580XFASM12_1539XFASM12_1542XFASM12_1541XFASM12_1205
XFAS183190 PD_1397PD_1399PD_1398PD_1047
XFAS160492 XF2372XF2375XF2374XF1818
XCAM487884 XCC-B100_2148XCC-B100_0869XCC-B100_0866XCC-B100_0867XCC-B100_0870
XCAM316273 XCAORF_2113XCAORF_3661XCAORF_3664XCAORF_3663XCAORF_3659
XCAM314565 XC_2329XC_0836XC_0833XC_0834XC_0837
XCAM190485 XCC1860XCC3328XCC3331XCC3330XCC3327
XAXO190486 XAC1882XAC3456XAC3458XAC3457XAC3455
XAUT78245 XAUT_2589XAUT_1180XAUT_1185XAUT_1329
VVUL216895 VV1_0655VV1_0656VV1_0657VV1_0654
VVUL196600 VV0486VV0485VV0484VV0487
VPAR223926 VP0344VP0343VP0342VP0346
VFIS312309 VF0294VF0293VF0292VF0295
VEIS391735 VEIS_1910VEIS_1047VEIS_1049VEIS_1048VEIS_3626
VCHO345073 VC0395_A2067VC0395_A2066VC0395_A2067VC0395_A2068VC0395_A2065
VCHO VC2492VC2491VC2492VC2493VC2490
TTUR377629 TERTU_3094TERTU_2500TERTU_2502TERTU_2501TERTU_3419
TTHE300852 TTHA1911TTHA1230TTHA1228TTHA1229TTHA1210
TTHE262724 TT_C1547TT_C0867TT_C0865TT_C0866TT_C0849
TFUS269800 TFU_0626TFU_0615TFU_0626TFU_0627
TELO197221 TLR1600TLR0909TLR1234TLL1397
TDEN292415 TBD_0891TBD_1920TBD_1922TBD_1921TBD_1986
TCRU317025 TCR_0797TCR_0795TCR_0796TCR_0611
STYP99287 STM0111STM0112STM0111STM0110STM0113
STHE322159 STER_1246STER_1170STER_1168STER_1167STER_1171
STHE299768 STR1268STR1202STR1201STR1200STR1203
STHE292459 STH2116STH3035STH2116STH2115STH2687
STHE264199 STU1268STU1202STU1201STU1200STU1203
SSUI391296 SSU98_1219SSU98_1953SSU98_1952SSU98_1951SSU98_1954
SSUI391295 SSU05_1205SSU05_1948SSU05_1947SSU05_1946SSU05_1949
SSP94122 SHEWANA3_3760SHEWANA3_3759SHEWANA3_3758SHEWANA3_3761
SSP84588 SYNW0784OR1664SYNW0262OR1282SYNW0263OR1283SYNW0730OR1620
SSP64471 GSYN1830GSYN0323GSYN0324GSYN1052
SSP644076 SCH4B_3679SCH4B_2679SCH4B_2680SCH4B_1384
SSP321332 CYB_1631CYB_0327CYB_2021CYB_1442
SSP321327 CYA_1798CYA_0286CYA_2201CYA_2223
SSP292414 TM1040_3762TM1040_2508TM1040_2509TM1040_2282
SSP1148 SLR1517SLL1470SLL1444SLR0186
SSP1131 SYNCC9605_1865SYNCC9605_0256SYNCC9605_0257SYNCC9605_1939
SSON300269 SSO_0744SSO_0080SSO_0079SSO_0078SSO_0081
SSED425104 SSED_0394SSED_0395SSED_0396SSED_0393
SSAP342451 SSP0820SSP0819SSP0818SSP0821
SRUB309807 SRU_1477SRU_2148SRU_2150SRU_2152SRU_2149
SPRO399741 SPRO_0744SPRO_0743SPRO_0742SPRO_0745
SPEA398579 SPEA_3827SPEA_3826SPEA_3825SPEA_3828
SONE211586 SO_4235SO_4234SO_4233SO_4236
SMUT210007 SMU_670SMU_1383SMU_1382SMU_1381SMU_1384
SMEL266834 SMC03823SMC04405SMC03823SMC03795
SMED366394 SMED_0365SMED_3178SMED_3059SMED_3028
SLOI323850 SHEW_3471SHEW_3470SHEW_3469SHEW_3472
SLAC55218 SL1157_0889SL1157_0882SL1157_0884SL1157_0568
SHIGELLA YBHJLEUBLEUCLEUDLEUA
SHAL458817 SHAL_0439SHAL_0440SHAL_0441SHAL_0438
SHAE279808 SH0975SH0974SH0973SH0976
SGOR29390 SGO_1613SGO_0907SGO_0909SGO_0910SGO_0906
SGLO343509 SG0435SG0436SG0435SG0434SG0437
SFLE373384 SFV_0754SFV_0065SFV_0064SFV_0063SFV_0066
SFLE198214 AAN42522.1AAN41733.1AAN41732.1AAN41731.1AAN41734.1
SEPI176280 SE_1659SE_1660SE_1661SE_1658
SEPI176279 SERP1670SERP1671SERP1672SERP1669
SENT454169 SEHA_C0122SEHA_C0123SEHA_C0122SEHA_C0121SEHA_C0124
SENT321314 SCH_0107SCH_0108SCH_0107SCH_0106SCH_0109
SENT295319 SPA0113SPA0114SPA0113SPA0112SPA0115
SENT220341 STY0130STY0131STY0130STY0129STY0132
SENT209261 T0115T0116T0115T0114T0117
SELO269084 SYC2490_CSYC2197_DSYC1562_CSYC0145_D
SDYS300267 SDY_0099SDY_0100SDY_0099SDY_0098SDY_0101
SDEN318161 SDEN_0335SDEN_0336SDEN_0337SDEN_0334
SDEG203122 SDE_2084SDE_2086SDE_2085SDE_2523
SBOY300268 SBO_0658SBO_0060SBO_0059SBO_0058SBO_0061
SBAL402882 SHEW185_0386SHEW185_0387SHEW185_0388SHEW185_0385
SBAL399599 SBAL195_0398SBAL195_0399SBAL195_0400SBAL195_0397
SAUR93062 SACOL2047SACOL2048SACOL2049SACOL2046
SAUR93061 SAOUHSC_02286SAOUHSC_02287SAOUHSC_02288SAOUHSC_02285
SAUR426430 NWMN_1964NWMN_1965NWMN_1966NWMN_1963
SAUR418127 SAHV_2043SAHV_2044SAHV_2045SAHV_2042
SAUR367830 SAUSA300_2011SAUSA300_2012SAUSA300_2013SAUSA300_2010
SAUR359787 SAURJH1_2132SAURJH1_2133SAURJH1_2134SAURJH1_2131
SAUR359786 SAURJH9_2095SAURJH9_2096SAURJH9_2097SAURJH9_2094
SAUR282459 SAS1963SAS1964SAS1965SAS1962
SAUR282458 SAR2145SAR2146SAR2147SAR2144
SAUR273036 SAB1943SAB1944SAB1945SAB1942
SAUR196620 MW1982MW1983MW1984MW1981
SAUR158879 SA1863SA1864SA1865SA1862
SAUR158878 SAV2058SAV2059SAV2060SAV2057
RXYL266117 RXYL_2824RXYL_3130RXYL_0278RXYL_0279RXYL_3129
RSPH349102 RSPH17025_0162RSPH17025_0158RSPH17025_0159RSPH17025_1598
RSPH349101 RSPH17029_2518RSPH17029_2523RSPH17029_2521RSPH17029_1005
RSPH272943 RSP_0859RSP_0863RSP_0862RSP_2330
RSP357808 ROSERS_1961ROSERS_1958ROSERS_1961ROSERS_1960ROSERS_1965
RSOL267608 RSC1988RSC1990RSC1989RSC2072
RPOM246200 SPO_0210SPO_0216SPO_0215SPO_0422
RPAL316058 RPB_0335RPB_0348RPB_0342RPB_3330
RPAL316057 RPD_0490RPD_0504RPD_0498RPD_2112
RPAL316056 RPC_0240RPC_0227RPC_0230RPC_3235
RPAL316055 RPE_0332RPE_0480RPE_0332RPE_0339RPE_2209
RPAL258594 RPA0227RPA0240RPA0235RPA2046
RMET266264 RMET_4273RMET_2472RMET_4273RMET_2473RMET_0918
RLEG216596 RL4555RL4707RL4555RL4705
RFER338969 RFER_1793RFER_1795RFER_1794RFER_2345
REUT381666 H16_B2275H16_A2619H16_A2621H16_A2620H16_A1041
REUT264198 REUT_B4843REUT_A2311REUT_A2314REUT_A2312REUT_A0953
RDEN375451 RD1_0228RD1_0616RD1_0226RD1_1211
RCAS383372 RCAS_1549RCAS_1546RCAS_1549RCAS_1548RCAS_1553
PSYR205918 PSYR_3404PSYR_1985PSYR_1983PSYR_1984
PSTU379731 PST_1774PST_1772PST_1773PST_3240
PSP312153 PNUC_0767PNUC_0764PNUC_0766PNUC_1058
PSP296591 BPRO_3610BPRO_3608BPRO_3609BPRO_2322
PSP117 RB2114RB12597RB12656RB12658RB12756
PRUM264731 GFRORF0733GFRORF0730GFRORF0731GFRORF0729
PPRO298386 PBPRA0417PBPRA0418PBPRA0417PBPRA0416PBPRA0419
PNAP365044 PNAP_3041PNAP_3039PNAP_3040PNAP_1721
PMUL272843 PM1960PM1961PM1960PM1959PM1962
PMEN399739 PMEN_2721PMEN_2723PMEN_2722PMEN_0989
PMAR74547 PMT0531PMT1844PMT1843PMT1121
PLUM243265 PLU3675PLU3674PLU3675PLU3676PLU3673
PING357804 PING_2120PING_2229PING_1669PING_1670PING_0216
PHAL326442 PSHAA2893PSHAA2892PSHAA2891PSHAA2894
PFLU216595 PFLU2049PFLU4193PFLU4196PFLU4195
PDIS435591 BDI_1074BDI_2059BDI_2063BDI_2062BDI_2064
PATL342610 PATL_2765PATL_3269PATL_3270PATL_3271PATL_3268
OIHE221109 OB2619OB2618OB2617OB2620
OCAR504832 OCAR_4283OCAR_4273OCAR_4276OCAR_5296
NWIN323098 NWI_2795NWI_2785NWI_2791NWI_2338
NSP103690 ALR1313ALL1417ALL1416ALR4840
NPHA348780 NP0404ANP2194ANP2192ANP0624A
NOCE323261 NOC_2707NOC_1014NOC_2935NOC_1013NOC_2516
NMUL323848 NMUL_A1918NMUL_A1921NMUL_A1919NMUL_A0453
NMEN374833 NMCC_1164NMCC_1159NMCC_1161NMCC_0988
NMEN272831 NMC1182NMC1176NMC1179NMC1034
NMEN122587 NMA1456NMA1450NMA1452NMA1270
NMEN122586 NMB_1031NMB_1036NMB_1034NMB_1070
NHAM323097 NHAM_3595NHAM_3584NHAM_3591NHAM_2715
NGON242231 NGO0674NGO0679NGO0677NGO0848
NEUT335283 NEUT_1147NEUT_1144NEUT_1146NEUT_1244
NEUR228410 NE0688NE0685NE0687NE1320
NARO279238 SARO_1170SARO_2662SARO_1170SARO_1173
MSUC221988 MS0596MS0598MS0596MS0595MS0599
MSP409 M446_5705M446_6646M446_0819M446_0040M446_1444
MPET420662 MPE_A2162MPE_A2164MPE_A2163MPE_A2101
MMAR394221 MMAR10_0283MMAR10_0285MMAR10_0284MMAR10_0287
MMAG342108 AMB4067AMB4069AMB4067AMB4068AMB3512
MFLA265072 MFLA_1703MFLA_1705MFLA_1704MFLA_0517
MEXT419610 MEXT_2524MEXT_4355MEXT_0296MEXT_2674
MCAP243233 MCA_2065MCA_2063MCA_2065MCA_2064MCA_2275
MAQU351348 MAQU_1664MAQU_1563MAQU_1565MAQU_1564MAQU_2477
MAER449447 MAE_00210MAE_53130MAE_36900MAE_54460
LWEL386043 LWE2007LWE2008LWE2009LWE2006
LSPH444177 BSPH_3385BSPH_3384BSPH_3383BSPH_3386
LMON265669 LMOF2365_2011LMOF2365_2012LMOF2365_2013LMOF2365_2010
LMON169963 LMO1988LMO1989LMO1990LMO1987
LMES203120 LEUM_2031LEUM_2030LEUM_2029LEUM_2032
LLAC272623 L68478L0074L0075L0076
LINT267671 LIC_20249LIC_11768LIC_11822LIC_11821LIC_11726
LINT189518 LB327LA2152LA2095LA2096LA2202
LINN272626 LIN2095LIN2096LIN2097LIN2094
LCHO395495 LCHO_1677LCHO_1675LCHO_1676LCHO_2888
LBOR355277 LBJ_4240LBJ_1863LBJ_1913LBJ_1912LBJ_1362
LBOR355276 LBL_4254LBL_1421LBL_1371LBL_1372LBL_1587
LBIF456481 LEPBI_II0249LEPBI_I2317LEPBI_I1625LEPBI_I1626LEPBI_I1845
LBIF355278 LBF_4237LBF_2251LBF_1575LBF_1576LBF_1792
KPNE272620 GKPORF_B4296GKPORF_B4358GKPORF_B4357GKPORF_B4356GKPORF_B4359
JSP375286 MMA_2169MMA_2172MMA_2170MMA_2145
JSP290400 JANN_0128JANN_0135JANN_0123JANN_3643
HSOM228400 HSM_0715HSM_0716HSM_0715HSM_0714HSM_0717
HSOM205914 HS_0390HS_0391HS_0390HS_0389HS_0392
HNEP81032 HNE_0056HNE_1477HNE_1078HNE_0440
HMUK485914 HMUK_0597HMUK_2656HMUK_2657HMUK_0025
HMAR272569 RRNAC2158RRNAC0334RRNAC0336RRNAC1690
HINF71421 HI_0988HI_0987HI_0988HI_0989HI_0986
HINF374930 CGSHIEE_07025CGSHIEE_07030CGSHIEE_07025CGSHIEE_07020CGSHIEE_07035
HINF281310 NTHI1162NTHI1161NTHI1162NTHI1163NTHI1160
HHAL349124 HHAL_1810HHAL_1812HHAL_1811HHAL_0690
HCHE349521 HCH_02430HCH_02428HCH_02429HCH_05908
HAUR316274 HAUR_3302HAUR_4439HAUR_4441HAUR_4440HAUR_4446
HARS204773 HEAR1217HEAR1215HEAR1216HEAR1242
GVIO251221 GLR4087GLL3551GLR3417GLR3418GLL2290
GTHE420246 GTNG_2585GTNG_2586GTNG_2585GTNG_2584GTNG_2587
GOXY290633 GOX0191GOX0193GOX0192GOX1733
GKAU235909 GK2656GK2657GK2656GK2655GK2658
GFOR411154 GFO_1602GFO_2098GFO_2096GFO_2097GFO_2095
GBET391165 GBCGDNIH1_1680GBCGDNIH1_1678GBCGDNIH1_1680GBCGDNIH1_1679GBCGDNIH1_1472
FTUL401614 FTN_0061FTN_0059FTN_0061FTN_0060
FSUC59374 FSU0588FSU3213FSU0466FSU0467FSU2908
FPHI484022 FPHI_0770FPHI_0772FPHI_0770FPHI_0771
FJOH376686 FJOH_1952FJOH_1304FJOH_1307FJOH_1306FJOH_2865
ESP42895 ENT638_0620ENT638_0621ENT638_0620ENT638_0619ENT638_0622
ELIT314225 ELI_10400ELI_08335ELI_03310ELI_03300
EFER585054 EFER_3667EFER_0095EFER_0094EFER_0093EFER_0096
ECOO157 YBHJLEUBLEUCLEUDLEUA
ECOL83334 ECS0799ECS0077ECS0076ECS0075ECS0078
ECOL585397 ECED1_0735ECED1_0073ECED1_0072ECED1_0071ECED1_0074
ECOL585057 ECIAI39_0739ECIAI39_0078ECIAI39_0077ECIAI39_0076ECIAI39_0079
ECOL585056 ECUMN_0856ECUMN_0075ECUMN_0074ECUMN_0073ECUMN_0076
ECOL585055 EC55989_0753EC55989_0071EC55989_0070EC55989_0069EC55989_0072
ECOL585035 ECS88_0788ECS88_0078ECS88_0077ECS88_0076ECS88_0079
ECOL585034 ECIAI1_0741ECIAI1_0074ECIAI1_0073ECIAI1_0072ECIAI1_0075
ECOL481805 ECOLC_2891ECOLC_3584ECOLC_3585ECOLC_3586ECOLC_3583
ECOL469008 ECBD_3544ECBD_3543ECBD_3544ECBD_3545ECBD_3542
ECOL439855 ECSMS35_0794ECSMS35_0078ECSMS35_0077ECSMS35_0076ECSMS35_0079
ECOL413997 ECB_00724ECB_00075ECB_00074ECB_00073ECB_00076
ECOL409438 ECSE_0824ECSE_0073ECSE_0072ECSE_0071ECSE_0074
ECOL405955 APECO1_1318APECO1_1910APECO1_1911APECO1_1912APECO1_1909
ECOL364106 UTI89_C0769UTI89_C0080UTI89_C0079UTI89_C0078UTI89_C0081
ECOL362663 ECP_0784ECP_0075ECP_0074ECP_0073ECP_0076
ECOL331111 ECE24377A_0798ECE24377A_0076ECE24377A_0075ECE24377A_0074ECE24377A_0077
ECOL316407 ECK0760:JW5103:B0771ECK0075:JW5807:B0073ECK0074:JW0071:B0072ECK0073:JW0070:B0071ECK0076:JW0073:B0074
ECOL199310 C0848C0090C0089C0087C0091
ECAR218491 ECA3833ECA3832ECA3833ECA3834ECA3831
DSHI398580 DSHI_0081DSHI_0085DSHI_0083DSHI_0596
DARO159087 DARO_0864DARO_0861DARO_0863DARO_3071
CVIO243365 CV_1121CV_2778CV_2784CV_2782CV_0595
CVES412965 COSY_0103COSY_0350COSY_0349COSY_0415
CSUL444179 SMGWSS_040SMGWSS_042SMGWSS_041SMGWSS_043
CSP78 CAUL_0213CAUL_0216CAUL_0215CAUL_1485
CSP501479 CSE45_0315CSE45_0307CSE45_0309CSE45_3330
CRUT413404 RMAG_0099RMAG_0372RMAG_0371RMAG_0449
CPSY167879 CPS_4209CPS_4210CPS_4211CPS_4208
CPEL335992 SAR11_0250SAR11_0252SAR11_0251SAR11_1374
CJEJ407148 C8J_1623C8J_1624C8J_1623C8J_1622C8J_1625
CJEJ360109 JJD26997_2094JJD26997_2095JJD26997_2094JJD26997_2092JJD26997_2096
CJEJ354242 CJJ81176_0015CJJ81176_0016CJJ81176_0015CJJ81176_0014CJJ81176_0017
CJEJ195099 CJE_1887CJE_1888CJE_1887CJE_1886CJE_1889
CJEJ192222 CJ1717CCJ1718CCJ1717CCJ1716CCJ1719C
CHUT269798 CHU_2223CHU_3744CHU_3742CHU_3743CHU_3741
CBLO291272 BPEN_135BPEN_136BPEN_135BPEN_134BPEN_137
CBLO203907 BFL131BFL132BFL131BFL130BFL133
CAULO CC0193CC0196CC0195CC1541
BXEN266265 BXE_B2301BXE_B2887BXE_B2522BXE_B2888
BWEI315730 BCERKBAB4_1323BCERKBAB4_1324BCERKBAB4_1325BCERKBAB4_1322
BVIE269482 BCEP1808_4457BCEP1808_4454BCEP1808_4456BCEP1808_2344
BTHU412694 BALH_1256BALH_1257BALH_1258BALH_1255
BTHU281309 BT9727_1285BT9727_1286BT9727_1287BT9727_1284
BTHE226186 BT_2072BT_1857BT_1860BT_1859BT_1861
BTHA271848 BTH_II0674BTH_II0672BTH_II0673BTH_I1050
BSUB BSU28260BSU28270BSU28260BSU28250BSU28280
BSP376 BRADO0353BRADO0374BRADO0365BRADO5528
BSP36773 BCEP18194_B2131BCEP18194_B2133BCEP18194_B2132BCEP18194_A5587
BSP107806 BUPL06BUPL05BUPL06BUPL07BUPL04
BPUM315750 BPUM_2467BPUM_2468BPUM_2467BPUM_2466BPUM_2469
BPSE320373 BURPS668_A2451BURPS668_A2454BURPS668_A2452BURPS668_1279
BPSE320372 BURPS1710B_B0915BURPS1710B_B0918BURPS1710B_B0916BURPS1710B_A1505
BPSE272560 BPSS1705BPSS1707BPSS1706BPSL1201
BPET94624 BPET1665BPET3035BPET4774BPET3036
BPER257313 BP2369BP1483BP1481BP1482
BPAR257311 BPP3235BPP1944BPP1942BPP1943
BMAL320389 BMA10247_A0523BMA10247_A0520BMA10247_A0522BMA10247_0401
BMAL320388 BMASAVP1_1643BMASAVP1_1641BMASAVP1_1642BMASAVP1_A1118
BLIC279010 BL00613BL00612BL00613BL00615BL00611
BJAP224911 BLL0504BLR0488BLR0495BLL6435
BHAL272558 BH3056BH3057BH3056BH3055BH3058
BFRA295405 BF3755BF3444BF3447BF3446BF3448
BFRA272559 BF3543BF3263BF3266BF3265BF3267
BCLA66692 ABC2640ABC2641ABC2640ABC2639ABC2642
BCER572264 BCA_1456BCA_1457BCA_1458BCA_1455
BCER405917 BCE_1521BCE_1522BCE_1523BCE_1520
BCER315749 BCER98_1124BCER98_1125BCER98_1126BCER98_1123
BCER288681 BCE33L1286BCE33L1287BCE33L1288BCE33L1285
BCER226900 BC_1401BC_1402BC_1403BC_1400
BCEN331272 BCEN2424_3952BCEN2424_3949BCEN2424_3951BCEN2424_2259
BCEN331271 BCEN_4415BCEN_4418BCEN_4416BCEN_1648
BBRO257310 BB3687BB2132BB2130BB2131
BANT592021 BAA_1488BAA_1489BAA_1490BAA_1487
BANT568206 BAMEG_3174BAMEG_3173BAMEG_3172BAMEG_3175
BANT261594 GBAA1421GBAA1422GBAA1423GBAA1420
BANT260799 BAS1312BAS1313BAS1314BAS1311
BAMY326423 RBAM_025320RBAM_025330RBAM_025320RBAM_025310RBAM_025340
BAMB398577 BAMMC406_3847BAMMC406_3844BAMMC406_3846BAMMC406_2176
BAMB339670 BAMB_3343BAMB_3340BAMB_3342BAMB_2298
AVAR240292 AVA_2987AVA_3967AVA_3966AVA_2111
ASP76114 EBA6773EBA4760EBA4757EBA4758EBA7154
ASP62928 AZO1041AZO1039AZO1040AZO3162
ASP232721 AJS_3233AJS_3229AJS_3232AJS_1774
ASAL382245 ASA_3410ASA_3411ASA_3412ASA_3409
APLE434271 APJL_0140APJL_0458APJL_0140APJL_0139APJL_0414
APLE416269 APL_0139APL_0432APL_0139APL_0138APL_0393
AMAR329726 AM1_0898AM1_4505AM1_0904AM1_0705
AHYD196024 AHA_0881AHA_0880AHA_0879AHA_0882
AFER243159 AFE_2614AFE_1020AFE_2415AFE_2413AFE_0506
AEHR187272 MLG_2603MLG_1230MLG_1228MLG_1229MLG_0551
ADEH290397 ADEH_1980ADEH_2070ADEH_1980ADEH_1979ADEH_1981
ACRY349163 ACRY_2149ACRY_2147ACRY_2149ACRY_2148ACRY_0534
ACAU438753 AZC_0304AZC_4061AZC_4057AZC_3545
ABOR393595 ABO_1467ABO_1470ABO_1469ABO_0638
ABAU360910 BAV0951BAV2268BAV2270BAV2269
ABAC204669 ACID345_0224ACID345_2917ACID345_2916ACID345_2915ACID345_2918
AAVE397945 AAVE_1221AAVE_1223AAVE_1222AAVE_3108


Organism features enriched in list (features available for 282 out of the 300 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00058121517
Arrangment:Pairs 0.002221067112
Disease:Food_poisoning 0.001355799
Disease:Gastroenteritis 0.00660061113
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00030611111
Endospores:No 5.751e-677211
GC_Content_Range4:0-40 2.337e-1067213
GC_Content_Range4:40-60 0.0004384127224
GC_Content_Range4:60-100 0.000412887145
GC_Content_Range7:0-30 1.145e-8547
GC_Content_Range7:30-40 0.000253962166
GC_Content_Range7:50-60 0.000092269107
GC_Content_Range7:60-70 0.000028585134
Genome_Size_Range5:0-2 5.071e-2621155
Genome_Size_Range5:4-6 9.786e-23143184
Genome_Size_Range9:0-1 0.0008360527
Genome_Size_Range9:1-2 6.156e-2216128
Genome_Size_Range9:4-5 1.209e-97396
Genome_Size_Range9:5-6 7.049e-117088
Gram_Stain:Gram_Neg 5.746e-9195333
Gram_Stain:Gram_Pos 0.000074953150
Habitat:Host-associated 0.004225186206
Habitat:Multiple 0.0031635100178
Habitat:Terrestrial 0.00520422231
Motility:No 2.149e-649151
Motility:Yes 1.409e-10167267
Optimal_temp.:- 0.0049171138257
Optimal_temp.:25-30 0.00461531519
Optimal_temp.:30-37 0.00003221718
Optimal_temp.:35-37 0.00099381213
Optimal_temp.:37 6.985e-827106
Oxygen_Req:Anaerobic 9.435e-1713102
Oxygen_Req:Facultative 6.363e-12136201
Shape:Rod 7.850e-7196347
Shape:Sphere 0.0024795319
Temp._range:Mesophilic 0.0050425240473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 149
Effective number of orgs (counting one per cluster within 468 clusters): 108

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT31
PGIN242619 ncbi Porphyromonas gingivalis W830
PAST100379 Onion yellows phytoplasma0
PACN267747 ncbi Propionibacterium acnes KPA1712021
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
MXAN246197 ncbi Myxococcus xanthus DK 16221
MSYN262723 ncbi Mycoplasma synoviae 530
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
ILOI283942 ncbi Idiomarina loihiensis L2TR1
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FRANT ncbi Francisella tularensis tularensis SCHU S40
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake1
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1111
CBUR360115 ncbi Coxiella burnetii RSA 3311
CBUR227377 ncbi Coxiella burnetii RSA 4931
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BQUI283165 ncbi Bartonella quintana Toulouse0
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0


Names of the homologs of the genes in the group in each of these orgs
  G6401   EG11577   EG11576   EG11575   EG11226   
WPIP955 WD_0105
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116 TVN0189
TPEN368408
TPAL243276
TLET416591
TKOD69014 TK0282
TDEN243275
TACI273075 TA0112
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMAR399550
SAGA211110
SAGA208435
SAGA205921
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456 RF_1264
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_0296
RAKA293614
PPEN278197
PINT246198
PHOR70601 PH1726
PGIN242619
PAST100379
PACN267747 PPA1061
OTSU357244
NSEN222891
MXAN246197 MXAN_1282
MSYN262723
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LJOH257314
LINT363253
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
ILOI283942 IL1533
HSP64091 VNG2574G
HSAL478009 OE4613F
HPYL85963
HPYL357544
HPY
HHEP235279 HH_1134
HDUC233412
HBUT415426
HACI382638
FTUL418136
FTUL393115
FRANT
FNUC190304
FNOD381764
FMAG334413
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484 ECAJ_0828
DNOD246195
CTRA471473
CTRA471472
CTET212717
CTEP194439 CT_0615
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CNOV386415 NT01CX_0140
CMUR243161
CFEL264202
CCHL340177 CAG_1901
CCAV227941
CBUR434922 COXBU7E912_0285
CBUR360115 COXBURSA331_A1910
CBUR227377 CBU_1720
CBOT536232 CLM_0497
CBOT515621 CLJ_B0486
CBOT498213 CLD_0325
CBOT441772 CLI_0503
CBOT441771 CLC_0484
CBOT441770 CLB_0451
CBOT36826 CBO0418
CABO218497
BTUR314724
BTRI382640
BQUI283165
BHER314723
BHEN283166
BGAR290434
BCIC186490
BBUR224326
BBAC360095
BBAC264462 BD2784
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557
AORE350688
AMAR234826
ALAI441768


Organism features enriched in list (features available for 139 out of the 149 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00340003292
Arrangment:Pairs 0.001186715112
Disease:Botulism 0.000728855
Disease:Legionnaire's_disease 0.003125844
Disease:None 0.0003508458
Disease:Pharyngitis 8.925e-688
Disease:Wide_range_of_infections 1.037e-71111
Disease:bronchitis_and_pneumonitis 8.925e-688
GC_Content_Range4:0-40 1.249e-23101213
GC_Content_Range4:40-60 0.000075335224
GC_Content_Range4:60-100 3.146e-163145
GC_Content_Range7:0-30 1.369e-153647
GC_Content_Range7:30-40 6.078e-865166
GC_Content_Range7:50-60 1.259e-68107
GC_Content_Range7:60-70 1.385e-143134
Genome_Size_Range5:0-2 2.035e-3596155
Genome_Size_Range5:4-6 3.339e-214184
Genome_Size_Range5:6-10 0.0000244147
Genome_Size_Range9:0-1 1.291e-102227
Genome_Size_Range9:1-2 6.536e-2274128
Genome_Size_Range9:4-5 2.089e-8496
Habitat:Aquatic 2.956e-6691
Habitat:Host-associated 9.279e-1892206
Habitat:Multiple 0.000067525178
Habitat:Terrestrial 0.0086182231
Motility:Yes 0.000020343267
Optimal_temp.:37 1.613e-1052106
Pathogenic_in:Animal 0.00275802566
Pathogenic_in:Human 9.978e-877213
Pathogenic_in:No 5.992e-828226
Salinity:Non-halophilic 0.003008936106
Shape:Rod 0.005434171347
Shape:Sphere 3.616e-71519



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS 0.0000581644


Names of the homologs of the genes in the group in each of these orgs
  G6401   EG11577   EG11576   EG11575   EG11226   
CSUL444179 SMGWSS_040SMGWSS_042SMGWSS_041SMGWSS_043


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582940.5348
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652520.4972
PWY-5340 (sulfate activation for sulfonation)3852540.4536
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112180.4384
PWY-5386 (methylglyoxal degradation I)3052140.4314
GLYCOCAT-PWY (glycogen degradation I)2461840.4307
METSYN-PWY (homoserine and methionine biosynthesis)3972550.4265
VALSYN-PWY (valine biosynthesis)5152980.4244
PWY-4041 (γ-glutamyl cycle)2792000.4241
HISTSYN-PWY (histidine biosynthesis)4992930.4241
ACETATEUTIL-PWY (superpathway of acetate utilization and formation)2371780.4227
DAPLYSINESYN-PWY (lysine biosynthesis I)3422300.4217
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862030.4208
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181670.4178
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))5052940.4167
MET-SAM-PWY (superpathway of S-adenosyl-L-methionine biosynthesis)3922510.4139
HOMOSER-METSYN-PWY (methionine biosynthesis I)4192620.4123
CYSTSYN-PWY (cysteine biosynthesis I)5042930.4111
PWY-5194 (siroheme biosynthesis)3122140.4097
PWY-5918 (heme biosynthesis I)2721940.4082
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262200.4053
PWY-1269 (CMP-KDO biosynthesis I)3252190.4019
PWY0-1313 (acetate conversion to acetyl-CoA)3852460.4007
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491810.4007
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491810.4007



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11577   EG11576   EG11575   EG11226   
G64010.9991570.9995370.9994990.998922
EG115770.9999440.9999640.999777
EG115760.9999970.999638
EG115750.999615
EG11226



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PAIRWISE BLAST SCORES:

  G6401   EG11577   EG11576   EG11575   EG11226   
G64010.0f0-2.0e-15--
EG11577-0.0f0---
EG11576--0.0f0--
EG11575---0.0f0-
EG11226----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- LEUSYN-PWY (leucine biosynthesis) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.800, average score: 0.956)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9992 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9928 0.9883 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.7711 0.3465 EG11040 (tyrB) TYRB-MONOMER (TyrB)
   *in cand* 0.9996 0.9989 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9998 0.9995 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9998 0.9995 EG11576 (leuC) LEUC-MONOMER (LeuC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9989 G6401 (ybhJ) G6401-MONOMER (predicted hydratase)

- BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis) (degree of match pw to cand: 0.250, degree of match cand to pw: 0.800, average score: 0.935)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9998 0.9995 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9996 0.9989 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
             0.7711 0.3465 EG11040 (tyrB) TYRB-MONOMER (TyrB)
   *in cand* 0.9998 0.9992 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.8684 0.5699 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.8052 0.7351 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9983 0.9954 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
             0.9974 0.9915 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.9990 0.9977 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
             0.9988 0.9974 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9976 0.9940 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9928 0.9883 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9947 0.9847 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9989 G6401 (ybhJ) G6401-MONOMER (predicted hydratase)

- 3-ISOPROPYLMALISOM-CPLX (isopropylmalate isomerase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.400, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9998 0.9995 EG11576 (leuC) LEUC-MONOMER (LeuC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9989 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9998 0.9992 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9994 0.9989 G6401 (ybhJ) G6401-MONOMER (predicted hydratase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11226 EG11575 EG11576 EG11577 (centered at EG11577)
G6401 (centered at G6401)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6401   EG11577   EG11576   EG11575   EG11226   
290/623399/623384/623380/623373/623
AAEO224324:0:Tyes10900--1305
AAUR290340:2:Tyes--10-
AAVE397945:0:Tyes-0211860
ABAC204669:0:Tyes02714271327122715
ABAU360910:0:Tyes0131913211320-
ABOR393595:0:Tyes-8488518500
ABUT367737:0:Tyes0930--375
ACAU438753:0:Tyes-0380137973277
ACEL351607:0:Tyes1-10-
ACRY349163:8:Tyes16221620162216210
ADEH290397:0:Tyes191102
AEHR187272:0:Tyes20386746726730
AFER243159:0:Tyes2074502188018780
AFUL224325:0:Tyes1953400--0
AHYD196024:0:Tyes-2103
AMAR329726:9:Tyes-18937651960
AMET293826:0:Tyes0232--235
ANAE240017:0:Tyes0-01-
APLE416269:0:Tyes129710257
APLE434271:0:Tno130610267
ASAL382245:5:Tyes-1230
ASP1667:3:Tyes0-876875-
ASP232721:2:Tyes-1412140814110
ASP62928:0:Tyes-2012152
ASP62977:0:Tyes-402-
ASP76114:2:Tyes11932011380
AVAR240292:3:Tyes-875185818570
BABO262698:0:Tno-0-7-
BABO262698:1:Tno--0--
BAMB339670:2:Tno-302-
BAMB339670:3:Tno----0
BAMB398577:2:Tno-302-
BAMB398577:3:Tno----0
BAMY326423:0:Tyes12103
BANT260799:0:Tno-1230
BANT261594:2:Tno-1230
BANT568206:2:Tyes-2103
BANT592021:2:Tno-1230
BBAC264462:0:Tyes0----
BBRO257310:0:Tyes1563201-
BCAN483179:0:Tno-7-0-
BCAN483179:1:Tno--0--
BCEN331271:1:Tno-031-
BCEN331271:2:Tno----0
BCEN331272:2:Tyes-302-
BCEN331272:3:Tyes----0
BCER226900:1:Tyes-1230
BCER288681:0:Tno-1230
BCER315749:1:Tyes-1230
BCER405917:1:Tyes-1230
BCER572264:1:Tno-1230
BCLA66692:0:Tyes12103
BFRA272559:1:Tyes2760324
BFRA295405:0:Tno3190324
BHAL272558:0:Tyes12103
BJAP224911:0:Fyes-15075990
BLIC279010:0:Tyes12103
BLON206672:0:Tyes--01-
BMAL243160:0:Tno-031-
BMAL320388:0:Tno-201-
BMAL320388:1:Tno----0
BMAL320389:0:Tyes-302-
BMAL320389:1:Tyes----0
BMEL224914:0:Tno-0-7-
BMEL224914:1:Tno--0--
BMEL359391:0:Tno-0-7-
BMEL359391:1:Tno--0--
BOVI236:0:Tyes-7-0-
BPAR257311:0:Tno1219201-
BPER257313:0:Tyes802201-
BPET94624:0:Tyes0137731431378-
BPSE272560:0:Tyes-021-
BPSE272560:1:Tyes----0
BPSE320372:0:Tno-031-
BPSE320372:1:Tno----0
BPSE320373:0:Tno-031-
BPSE320373:1:Tno----0
BPUM315750:0:Tyes12103
BSP107806:1:Tyes21230
BSP36773:1:Tyes-021-
BSP36773:2:Tyes----0
BSP376:0:Tyes-016104910
BSUB:0:Tyes12103
BSUI204722:0:Tyes-7-0-
BSUI204722:1:Tyes--0--
BSUI470137:0:Tno-7-0-
BSUI470137:1:Tno--0--
BTHA271848:0:Tno-201-
BTHA271848:1:Tno----0
BTHE226186:0:Tyes2220324
BTHU281309:1:Tno-1230
BTHU412694:1:Tno-1230
BVIE269482:6:Tyes-302-
BVIE269482:7:Tyes----0
BWEI315730:4:Tyes-1230
BXEN266265:1:Tyes58213650-
CACE272562:1:Tyes02199---
CAULO:0:Tyes-0321369
CBEI290402:0:Tyes0146---
CBLO203907:0:Tyes12103
CBLO291272:0:Tno12103
CBOT36826:1:Tno0----
CBOT441770:0:Tyes0----
CBOT441771:0:Tno0----
CBOT441772:1:Tno0----
CBOT498213:1:Tno0----
CBOT508765:1:Tyes0176---
CBOT515621:2:Tyes0----
CBOT536232:0:Tno0----
CBUR227377:1:Tyes0----
CBUR360115:1:Tno0----
CBUR434922:2:Tno0----
CCHL340177:0:Tyes-0---
CCON360104:2:Tyes5550--213
CCUR360105:0:Tyes1356378--0
CDES477974:0:Tyes641889--0
CDIF272563:1:Tyes0164---
CDIP257309:0:Tyes0-01-
CEFF196164:0:Fyes0-01-
CFET360106:0:Tyes0804--1118
CGLU196627:0:Tyes0-01-
CHOM360107:1:Tyes01119--358
CHUT269798:0:Tyes01492149014911489
CHYD246194:0:Tyes13--0
CJAP155077:0:Tyes-201-
CJEI306537:0:Tyes1-10-
CJEJ192222:0:Tyes12103
CJEJ195099:0:Tno12103
CJEJ354242:2:Tyes12103
CJEJ360109:0:Tyes12103
CJEJ407148:0:Tno12103
CKLU431943:1:Tyes01176--1179
CKOR374847:0:Tyes0---1
CMAQ397948:0:Tyes0---544
CMET456442:0:Tyes0---859
CMIC31964:2:Tyes--10-
CMIC443906:2:Tyes--01-
CNOV386415:0:Tyes0----
CPEL335992:0:Tyes-0211135
CPHY357809:0:Tyes0893--708
CPSY167879:0:Tyes-1230
CRUT413404:0:Tyes-0255254326
CSAL290398:0:Tyes-021-
CSP501479:7:Fyes----0
CSP501479:8:Fyes-802-
CSP78:2:Tyes-0321275
CSUL444179:0:Tyes-0213
CTEP194439:0:Tyes-0---
CVES412965:0:Tyes-0236235295
CVIO243365:0:Tyes5452233223922370
DARO159087:0:Tyes-3022220
DDES207559:0:Tyes01848--1844
DETH243164:0:Tyes0361--365
DGEO319795:1:Tyes428431--0
DHAF138119:0:Tyes28670---
DOLE96561:0:Tyes1136182--0
DPSY177439:2:Tyes01190---
DRAD243230:3:Tyes122292--0
DRED349161:0:Tyes13--0
DSHI398580:5:Tyes-042525
DSP216389:0:Tyes20--4
DSP255470:0:Tno20--4
DVUL882:1:Tyes01910--1906
ECAN269484:0:Tyes0----
ECAR218491:0:Tyes21230
ECOL199310:0:Tno7383204
ECOL316407:0:Tno6902103
ECOL331111:6:Tno6822103
ECOL362663:0:Tno7072103
ECOL364106:1:Tno6882103
ECOL405955:2:Tyes6105406
ECOL409438:6:Tyes7762103
ECOL413997:0:Tno6632103
ECOL439855:4:Tno6872103
ECOL469008:0:Tno21230
ECOL481805:0:Tno0705706707704
ECOL585034:0:Tno6722103
ECOL585035:0:Tno6992103
ECOL585055:0:Tno6852103
ECOL585056:2:Tno7942103
ECOL585057:0:Tno6732103
ECOL585397:0:Tno6412103
ECOL83334:0:Tno7472103
ECOLI:0:Tno7012103
ECOO157:0:Tno7492103
EFER585054:1:Tyes35492103
ELIT314225:0:Tyes1441102320-
ESP42895:1:Tyes12103
FALN326424:0:Tyes1-10-
FJOH376686:0:Tyes6660321589
FPHI484022:1:Tyes0201-
FSP106370:0:Tyes--10-
FSP1855:0:Tyes--01-
FSUC59374:0:Tyes1202670012373
FTUL351581:0:Tno1-10-
FTUL393011:0:Tno1-10-
FTUL401614:0:Tyes2021-
FTUL458234:0:Tno1-10-
GBET391165:0:Tyes2082062082070
GFOR411154:0:Tyes0496494495493
GKAU235909:1:Tyes12103
GMET269799:1:Tyes21680--664
GOXY290633:5:Tyes-0211528
GSUL243231:0:Tyes539971--0
GTHE420246:1:Tyes12103
GURA351605:0:Tyes2280--2658
GVIO251221:0:Tyes18201279114411450
HARS204773:0:Tyes-20126
HAUR316274:2:Tyes01151115311521158
HCHE349521:0:Tyes-2013355
HHAL349124:0:Tyes-1127112911280
HHEP235279:0:Tyes-0---
HINF281310:0:Tyes21230
HINF374930:0:Tyes12103
HINF71421:0:Tno21230
HMAR272569:8:Tyes1642-011235
HMOD498761:0:Tyes01401--1398
HMUK485914:1:Tyes563-263926400
HNEP81032:0:Tyes-014031009380
HSAL478009:4:Tyes0----
HSOM205914:1:Tyes12103
HSOM228400:0:Tno12103
HSP64091:2:Tno0----
HWAL362976:1:Tyes1774-1367-0
IHOS453591:0:Tyes0---54
ILOI283942:0:Tyes0----
JSP290400:1:Tyes-51303562
JSP375286:0:Tyes-2427250
KPNE272620:2:Tyes062616063
KRAD266940:2:Fyes--10-
LBIF355278:1:Tyes0----
LBIF355278:2:Tyes-67001217
LBIF456481:1:Tno0----
LBIF456481:2:Tno-69001220
LBOR355276:0:Tyes0----
LBOR355276:1:Tyes-4901188
LBOR355277:0:Tno0----
LBOR355277:1:Tno-4464954940
LCHO395495:0:Tyes-2011237
LINN272626:1:Tno-1230
LINT189518:0:Tyes0----
LINT189518:1:Tyes-5701107
LINT267671:0:Tno0----
LINT267671:1:Tno-4295940
LLAC272622:5:Tyes-30-6
LLAC272623:0:Tyes0547549550-
LMES203120:1:Tyes-2103
LMON169963:0:Tno-1230
LMON265669:0:Tyes-1230
LSPH444177:1:Tyes-2103
LWEL386043:0:Tyes-1230
LXYL281090:0:Tyes--01-
MABS561007:1:Tyes1-10-
MACE188937:0:Tyes0---3142
MAEO419665:0:Tyes0---553
MAER449447:0:Tyes-0533236925465
MAQU351348:2:Tyes101021905
MAVI243243:0:Tyes0-20802079-
MBAR269797:1:Tyes0---227
MBOV233413:0:Tno1-10-
MBOV410289:0:Tno1-10-
MBUR259564:0:Tyes1474---0
MCAP243233:0:Tyes2021198
MEXT419610:0:Tyes-2243406502392
MFLA265072:0:Tyes-1184118611850
MGIL350054:3:Tyes1-10-
MHUN323259:0:Tyes535---0
MJAN243232:2:Tyes0---194
MKAN190192:0:Tyes1057---0
MLAB410358:0:Tyes0---368
MLEP272631:0:Tyes--10-
MLOT266835:2:Tyes-950101-
MMAG342108:0:Tyes5555575555560
MMAR267377:0:Tyes86---0
MMAR368407:0:Tyes898---0
MMAR394221:0:Tyes-0214
MMAR402880:1:Tyes0---430
MMAR426368:0:Tyes412---0
MMAR444158:0:Tyes0---408
MMAZ192952:0:Tyes1109---0
MPET420662:1:Tyes-6163620
MSED399549:0:Tyes208---0
MSME246196:0:Tyes0-12631264-
MSP164756:1:Tno0-01-
MSP164757:0:Tno0-01-
MSP189918:2:Tyes0-01-
MSP266779:3:Tyes-1131800-
MSP400668:0:Tyes-201-
MSP409:2:Tyes5432635175001341
MSTA339860:0:Tyes889---0
MSUC221988:0:Tyes13104
MTBCDC:0:Tno1-10-
MTBRV:0:Tno1-10-
MTHE187420:0:Tyes14460--1296
MTHE264732:0:Tyes0357--360
MTHE349307:0:Tyes0---995
MTUB336982:0:Tno1-10-
MTUB419947:0:Tyes1-10-
MVAN350058:0:Tyes0-01-
MXAN246197:0:Tyes0----
NARO279238:0:Tyes0152303-
NEUR228410:0:Tyes-302642
NEUT335283:2:Tyes-30299
NFAR247156:2:Tyes1-10-
NGON242231:0:Tyes-053152
NHAM323097:2:Tyes-8418318370
NMEN122586:0:Tno-05338
NMEN122587:0:Tyes-1611571590
NMEN272831:0:Tno-1241201220
NMEN374833:0:Tno-1751701720
NMUL323848:3:Tyes-1452145514530
NOCE323261:1:Tyes16701189401475
NPHA348780:2:Tyes0-900899111
NSP103690:6:Tyes-01051043566
NSP35761:1:Tyes0-423422-
NSP387092:0:Tyes9450--684
NWIN323098:0:Tyes-4624524580
OANT439375:4:Tyes-0-10-
OANT439375:5:Tyes--0--
OCAR504832:0:Tyes-10031025
OIHE221109:0:Tyes-2103
PABY272844:0:Tyes13--0
PACN267747:0:Tyes0----
PAER178306:0:Tyes0---6
PAER208963:0:Tyes-301-
PAER208964:0:Tno-032-
PARC259536:0:Tyes-032-
PARS340102:0:Tyes0---6
PATL342610:0:Tyes0518519520517
PCAR338963:0:Tyes5500--3
PCRY335284:1:Tyes-032-
PDIS435591:0:Tyes0976980979981
PENT384676:0:Tyes-201-
PFLU205922:0:Tyes-301-
PFLU216595:1:Tyes0207120742073-
PFLU220664:0:Tyes-301-
PFUR186497:0:Tyes0---748
PHAL326442:1:Tyes-2103
PHOR70601:0:Tyes0----
PING357804:0:Tyes17861891138313840
PISL384616:0:Tyes0---226
PLUM243265:0:Fyes21230
PLUT319225:0:Tyes-1--0
PMAR146891:0:Tyes-5700-891
PMAR167539:0:Tyes-5920-868
PMAR167540:0:Tyes-5460-830
PMAR167542:0:Tyes-5250-895
PMAR167546:0:Tyes-5700-898
PMAR167555:0:Tyes-5010-1202
PMAR59920:0:Tno-01453-499
PMAR74546:0:Tyes-5470-833
PMAR74547:0:Tyes-013381337593
PMAR93060:0:Tyes-6150-938
PMEN399739:0:Tyes-1758176017590
PMOB403833:0:Tyes20--3
PMUL272843:1:Tyes12103
PNAP365044:8:Tyes-1329132713280
PPRO298386:2:Tyes12103
PPUT160488:0:Tno-301-
PPUT351746:0:Tyes-012752-
PPUT76869:0:Tno-301-
PRUM264731:0:Tyes-4120
PSP117:0:Tyes05908594259435998
PSP296591:2:Tyes-1281127912800
PSP312153:0:Tyes-302305
PSP56811:2:Tyes-021-
PSTU379731:0:Tyes-2011458
PSYR205918:0:Tyes1420201-
PSYR223283:2:Tyes-201-
PTHE370438:0:Tyes20233--0
PTOR263820:0:Tyes560---0
RALB246199:0:Tyes0----
RCAS383372:0:Tyes30327
RDEN375451:4:Tyes-23620913
RETL347834:5:Tyes-1280126-
REUT264198:2:Tyes0----
REUT264198:3:Tyes-1370137313710
REUT381666:1:Tyes0----
REUT381666:2:Tyes-1518152015190
RFEL315456:2:Tyes0----
RFER338969:1:Tyes-021552
RLEG216596:6:Tyes01520150-
RMET266264:1:Tyes0-0--
RMET266264:2:Tyes-1545-15460
RPAL258594:0:Tyes-01381828
RPAL316055:0:Tyes0148071860
RPAL316056:0:Tyes-13033009
RPAL316057:0:Tyes-01481633
RPAL316058:0:Tyes-01373018
RPOM246200:1:Tyes-065206
RRUB269796:1:Tyes-201-
RSAL288705:0:Tyes604-10-
RSOL267608:1:Tyes-02185
RSP101510:3:Fyes1663-10-
RSP357808:0:Tyes30327
RSPH272943:4:Tyes-1580158515830
RSPH349101:2:Tno-1526153115290
RSPH349102:5:Tyes-3011422
RXYL266117:0:Tyes25362839012838
SACI330779:0:Tyes0---666
SACI56780:0:Tyes0670--672
SALA317655:1:Tyes-010621064-
SARE391037:0:Tyes0-01-
SAUR158878:1:Tno-1230
SAUR158879:1:Tno-1230
SAUR196620:0:Tno-1230
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SAUR359786:1:Tno-1230
SAUR359787:1:Tno-1230
SAUR367830:3:Tno-1230
SAUR418127:0:Tyes-1230
SAUR426430:0:Tno-1230
SAUR93061:0:Fno-1230
SAUR93062:1:Tno-1230
SAVE227882:1:Fyes--10-
SBAL399599:3:Tyes-1230
SBAL402882:1:Tno-1230
SBOY300268:1:Tyes5632103
SCO:2:Fyes445-01-
SDEG203122:0:Tyes-021440
SDEN318161:0:Tyes-1230
SDYS300267:1:Tyes12103
SELO269084:0:Tyes-2396210214510
SENT209261:0:Tno12103
SENT220341:0:Tno12103
SENT295319:0:Tno12103
SENT321314:2:Tno12103
SENT454169:2:Tno12103
SEPI176279:1:Tyes-1230
SEPI176280:0:Tno-1230
SERY405948:0:Tyes0-22982297-
SFLE198214:0:Tyes8212103
SFLE373384:0:Tno6572103
SFUM335543:0:Tyes17822698--0
SGLO343509:3:Tyes12103
SGOR29390:0:Tyes6971340
SHAE279808:0:Tyes-2103
SHAL458817:0:Tyes-1230
SHIGELLA:0:Tno8132103
SLAC55218:1:Fyes-3203133150
SLOI323850:0:Tyes-2103
SMED366394:3:Tyes0278026632633-
SMEL266834:2:Tyes29133290-
SMUT210007:0:Tyes0650649648651
SONE211586:1:Tyes-2103
SPEA398579:0:Tno-2103
SPNE1313:0:Tyes-2-0-
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SPNE487214:0:Tno-2-03
SPNE488221:0:Tno-2-0-
SPRO399741:1:Tyes-2103
SRUB309807:1:Tyes0654656658655
SSAP342451:2:Tyes-2103
SSED425104:0:Tyes-1230
SSOL273057:0:Tyes0---1193
SSON300269:1:Tyes6382103
SSP1131:0:Tyes-1607011680
SSP1148:0:Tyes-01609276670
SSP292414:1:Tyes-0---
SSP292414:2:Tyes--2312320
SSP321327:0:Tyes-1442018341854
SSP321332:0:Tyes-1274016521090
SSP387093:0:Tyes01562--1816
SSP644076:3:Fyes-0---
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SSP64471:0:Tyes-137801652
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SSP94122:1:Tyes-2103
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STHE264199:0:Tyes642103
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STRO369723:0:Tyes0-01-
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SWOL335541:0:Tyes01716--1719
TACI273075:0:Tyes0----
TCRU317025:0:Tyes-1911891900
TDEN292415:0:Tyes01047104910481113
TDEN326298:0:Tyes9230---
TELO197221:0:Tyes-7000328494
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TFUS269800:0:Tyes1401415-
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TTHE300852:2:Tyes7142119200
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TVOL273116:0:Tyes0----
UMET351160:0:Tyes0---1889
VCHO:0:Tyes21230
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VEIS391735:1:Tyes8520212556
VFIS312309:2:Tyes-2103
VPAR223926:1:Tyes-2103
VVUL196600:2:Tyes-2103
VVUL216895:1:Tno-1230
WPIP955:0:Tyes0----
WSUC273121:0:Tyes01135--62
XAUT78245:1:Tyes-141505149
XAXO190486:0:Tyes01574157615751573
XCAM190485:0:Tyes01468147114701467
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XFAS160492:2:Tno-5515545530
XFAS183190:1:Tyes-3433453440
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XORY291331:0:Tno046424347
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XORY360094:0:Tno11151190
YENT393305:1:Tyes12103
YPES187410:5:Tno-1230
YPES214092:3:Tno-2103
YPES349746:2:Tno-1230
YPES360102:3:Tyes-1230
YPES377628:2:Tno-2103
YPES386656:2:Tno-1230
YPSE273123:2:Tno-2103
YPSE349747:2:Tno-1230
ZMOB264203:0:Tyes447582011775



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