Org ID | Org Name | # genes in group found in org |
ZMOB264203 ncbi | Zymomonas mobilis mobilis ZM4 | 4 |
YPSE349747 ncbi | Yersinia pseudotuberculosis IP 31758 | 5 |
YPSE273123 ncbi | Yersinia pseudotuberculosis IP 32953 | 5 |
YPES386656 ncbi | Yersinia pestis Pestoides F | 5 |
YPES377628 ncbi | Yersinia pestis Nepal516 | 5 |
YPES360102 ncbi | Yersinia pestis Antiqua | 5 |
YPES349746 ncbi | Yersinia pestis Angola | 5 |
YPES214092 ncbi | Yersinia pestis CO92 | 5 |
YPES187410 ncbi | Yersinia pestis KIM 10 | 5 |
YENT393305 ncbi | Yersinia enterocolitica enterocolitica 8081 | 5 |
XORY360094 ncbi | Xanthomonas oryzae pv. oryzae PXO99A | 5 |
XORY342109 ncbi | Xanthomonas oryzae pv. oryzae MAFF 311018 | 5 |
XORY291331 ncbi | Xanthomonas oryzae pv. oryzae KACC10331 | 5 |
XFAS405440 ncbi | Xylella fastidiosa M12 | 5 |
XFAS183190 ncbi | Xylella fastidiosa Temecula1 | 5 |
XFAS160492 ncbi | Xylella fastidiosa 9a5c | 5 |
XCAM487884 | Xanthomonas campestris pv. paulliniae | 5 |
XCAM316273 ncbi | Xanthomonas campestris pv. vesicatoria str. 85-10 | 5 |
XCAM314565 ncbi | Xanthomonas campestris pv. campestris str. 8004 | 5 |
XCAM190485 ncbi | Xanthomonas campestris pv. campestris str. ATCC 33913 | 5 |
XAXO190486 ncbi | Xanthomonas axonopodis pv. citri str. 306 | 5 |
XAUT78245 ncbi | Xanthobacter autotrophicus Py2 | 4 |
VVUL216895 ncbi | Vibrio vulnificus CMCP6 | 5 |
VVUL196600 ncbi | Vibrio vulnificus YJ016 | 5 |
VPAR223926 ncbi | Vibrio parahaemolyticus RIMD 2210633 | 5 |
VFIS312309 ncbi | Vibrio fischeri ES114 | 5 |
VEIS391735 ncbi | Verminephrobacter eiseniae EF01-2 | 5 |
VCHO345073 ncbi | Vibrio cholerae O395 | 5 |
VCHO ncbi | Vibrio cholerae O1 biovar El Tor str. N16961 | 5 |
TTUR377629 ncbi | Teredinibacter turnerae T7901 | 5 |
TDEN292415 ncbi | Thiobacillus denitrificans ATCC 25259 | 5 |
TCRU317025 ncbi | Thiomicrospira crunogena XCL-2 | 5 |
STYP99287 ncbi | Salmonella enterica enterica serovar Typhimurium str. LT2 | 5 |
STRO369723 ncbi | Salinispora tropica CNB-440 | 4 |
SSP94122 ncbi | Shewanella sp. ANA-3 | 5 |
SSP644076 | Silicibacter sp. TrichCH4B | 5 |
SSON300269 ncbi | Shigella sonnei Ss046 | 5 |
SSED425104 ncbi | Shewanella sediminis HAW-EB3 | 5 |
SPRO399741 ncbi | Serratia proteamaculans 568 | 5 |
SPEA398579 ncbi | Shewanella pealeana ATCC 700345 | 5 |
SONE211586 ncbi | Shewanella oneidensis MR-1 | 5 |
SMEL266834 ncbi | Sinorhizobium meliloti 1021 | 4 |
SMED366394 ncbi | Sinorhizobium medicae WSM419 | 5 |
SLOI323850 ncbi | Shewanella loihica PV-4 | 5 |
SLAC55218 | Ruegeria lacuscaerulensis | 4 |
SHIGELLA ncbi | Shigella flexneri 2a str. 2457T | 5 |
SHAL458817 ncbi | Shewanella halifaxensis HAW-EB4 | 5 |
SGLO343509 ncbi | Sodalis glossinidius morsitans | 5 |
SFUM335543 ncbi | Syntrophobacter fumaroxidans MPOB | 5 |
SFLE373384 ncbi | Shigella flexneri 5 str. 8401 | 5 |
SFLE198214 ncbi | Shigella flexneri 2a str. 301 | 5 |
SEPI176280 ncbi | Staphylococcus epidermidis ATCC 12228 | 4 |
SEPI176279 ncbi | Staphylococcus epidermidis RP62A | 4 |
SENT454169 ncbi | Salmonella enterica enterica serovar Heidelberg str. SL476 | 5 |
SENT321314 ncbi | Salmonella enterica enterica serovar Choleraesuis str. SC-B67 | 5 |
SENT295319 ncbi | Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 | 5 |
SENT220341 ncbi | Salmonella enterica enterica serovar Typhi str. CT18 | 5 |
SENT209261 ncbi | Salmonella enterica enterica serovar Typhi str. Ty2 | 5 |
SDYS300267 ncbi | Shigella dysenteriae Sd197 | 5 |
SDEN318161 ncbi | Shewanella denitrificans OS217 | 5 |
SDEG203122 ncbi | Saccharophagus degradans 2-40 | 5 |
SBOY300268 ncbi | Shigella boydii Sb227 | 5 |
SBAL402882 ncbi | Shewanella baltica OS185 | 5 |
SBAL399599 ncbi | Shewanella baltica OS195 | 5 |
SAUR93062 ncbi | Staphylococcus aureus aureus COL | 4 |
SAUR93061 ncbi | Staphylococcus aureus aureus NCTC 8325 | 4 |
SAUR426430 ncbi | Staphylococcus aureus aureus Newman | 4 |
SAUR418127 ncbi | Staphylococcus aureus aureus Mu3 | 4 |
SAUR367830 | Staphylococcus aureus aureus USA300 | 4 |
SAUR359787 ncbi | Staphylococcus aureus aureus JH1 | 4 |
SAUR359786 ncbi | Staphylococcus aureus aureus JH9 | 4 |
SAUR282459 ncbi | Staphylococcus aureus aureus MSSA476 | 4 |
SAUR282458 ncbi | Staphylococcus aureus aureus MRSA252 | 4 |
SAUR273036 ncbi | Staphylococcus aureus RF122 | 4 |
SAUR196620 ncbi | Staphylococcus aureus aureus MW2 | 4 |
SAUR158879 ncbi | Staphylococcus aureus aureus N315 | 4 |
SAUR158878 ncbi | Staphylococcus aureus aureus Mu50 | 4 |
SARE391037 ncbi | Salinispora arenicola CNS-205 | 4 |
SALA317655 ncbi | Sphingopyxis alaskensis RB2256 | 4 |
RSPH349102 ncbi | Rhodobacter sphaeroides ATCC 17025 | 4 |
RSPH349101 ncbi | Rhodobacter sphaeroides ATCC 17029 | 5 |
RSPH272943 ncbi | Rhodobacter sphaeroides 2.4.1 | 5 |
RSOL267608 ncbi | Ralstonia solanacearum GMI1000 | 5 |
RRUB269796 ncbi | Rhodospirillum rubrum ATCC 11170 | 5 |
RPOM246200 ncbi | Ruegeria pomeroyi DSS-3 | 4 |
RPAL316058 ncbi | Rhodopseudomonas palustris HaA2 | 4 |
RPAL316057 ncbi | Rhodopseudomonas palustris BisB5 | 4 |
RPAL316056 ncbi | Rhodopseudomonas palustris BisB18 | 5 |
RPAL316055 ncbi | Rhodopseudomonas palustris BisA53 | 5 |
RPAL258594 ncbi | Rhodopseudomonas palustris CGA009 | 5 |
RMET266264 ncbi | Ralstonia metallidurans CH34 | 5 |
RLEG216596 ncbi | Rhizobium leguminosarum bv. viciae 3841 | 4 |
RFER338969 ncbi | Rhodoferax ferrireducens T118 | 5 |
REUT381666 ncbi | Ralstonia eutropha H16 | 5 |
REUT264198 ncbi | Ralstonia eutropha JMP134 | 5 |
RETL347834 ncbi | Rhizobium etli CFN 42 | 4 |
RDEN375451 ncbi | Roseobacter denitrificans OCh 114 | 4 |
PSYR223283 ncbi | Pseudomonas syringae pv. tomato str. DC3000 | 5 |
PSYR205918 ncbi | Pseudomonas syringae pv. syringae B728a | 5 |
PSTU379731 ncbi | Pseudomonas stutzeri A1501 | 5 |
PSP56811 | Psychrobacter sp. | 5 |
PSP312153 ncbi | Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 | 5 |
PSP296591 ncbi | Polaromonas sp. JS666 | 5 |
PPUT76869 ncbi | Pseudomonas putida GB-1 | 5 |
PPUT351746 ncbi | Pseudomonas putida F1 | 5 |
PPUT160488 ncbi | Pseudomonas putida KT2440 | 4 |
PPRO298386 ncbi | Photobacterium profundum SS9 | 5 |
PNAP365044 ncbi | Polaromonas naphthalenivorans CJ2 | 5 |
PMUL272843 ncbi | Pasteurella multocida multocida Pm70 | 5 |
PMEN399739 ncbi | Pseudomonas mendocina ymp | 5 |
PLUM243265 ncbi | Photorhabdus luminescens laumondii TTO1 | 5 |
PING357804 ncbi | Psychromonas ingrahamii 37 | 5 |
PHAL326442 ncbi | Pseudoalteromonas haloplanktis TAC125 | 5 |
PFLU220664 ncbi | Pseudomonas fluorescens Pf-5 | 4 |
PFLU216595 ncbi | Pseudomonas fluorescens SBW25 | 5 |
PFLU205922 ncbi | Pseudomonas fluorescens Pf0-1 | 5 |
PENT384676 ncbi | Pseudomonas entomophila L48 | 5 |
PCRY335284 ncbi | Psychrobacter cryohalolentis K5 | 4 |
PCAR338963 ncbi | Pelobacter carbinolicus DSM 2380 | 4 |
PATL342610 ncbi | Pseudoalteromonas atlantica T6c | 5 |
PARC259536 ncbi | Psychrobacter arcticus 273-4 | 4 |
PAER208964 ncbi | Pseudomonas aeruginosa PAO1 | 5 |
PAER208963 ncbi | Pseudomonas aeruginosa UCBPP-PA14 | 5 |
OCAR504832 ncbi | Oligotropha carboxidovorans OM5 | 4 |
OANT439375 ncbi | Ochrobactrum anthropi ATCC 49188 | 4 |
NWIN323098 ncbi | Nitrobacter winogradskyi Nb-255 | 5 |
NOCE323261 ncbi | Nitrosococcus oceani ATCC 19707 | 4 |
NMUL323848 ncbi | Nitrosospira multiformis ATCC 25196 | 5 |
NMEN374833 ncbi | Neisseria meningitidis 053442 | 4 |
NMEN272831 ncbi | Neisseria meningitidis FAM18 | 4 |
NMEN122587 ncbi | Neisseria meningitidis Z2491 | 4 |
NMEN122586 ncbi | Neisseria meningitidis MC58 | 4 |
NHAM323097 ncbi | Nitrobacter hamburgensis X14 | 5 |
NGON242231 ncbi | Neisseria gonorrhoeae FA 1090 | 4 |
NEUT335283 ncbi | Nitrosomonas eutropha C91 | 5 |
NEUR228410 ncbi | Nitrosomonas europaea ATCC 19718 | 5 |
NARO279238 ncbi | Novosphingobium aromaticivorans DSM 12444 | 5 |
MXAN246197 ncbi | Myxococcus xanthus DK 1622 | 5 |
MTHE264732 ncbi | Moorella thermoacetica ATCC 39073 | 4 |
MSUC221988 ncbi | Mannheimia succiniciproducens MBEL55E | 5 |
MSP409 | Methylobacterium sp. | 5 |
MSP400668 ncbi | Marinomonas sp. MWYL1 | 5 |
MSP266779 ncbi | Chelativorans sp. BNC1 | 4 |
MPET420662 ncbi | Methylibium petroleiphilum PM1 | 5 |
MMAR394221 ncbi | Maricaulis maris MCS10 | 5 |
MMAG342108 ncbi | Magnetospirillum magneticum AMB-1 | 5 |
MLOT266835 ncbi | Mesorhizobium loti MAFF303099 | 4 |
MFLA265072 ncbi | Methylobacillus flagellatus KT | 5 |
MEXT419610 ncbi | Methylobacterium extorquens PA1 | 5 |
MCAP243233 ncbi | Methylococcus capsulatus Bath | 5 |
MAQU351348 ncbi | Marinobacter aquaeolei VT8 | 5 |
LSPH444177 ncbi | Lysinibacillus sphaericus C3-41 | 4 |
LPNE400673 ncbi | Legionella pneumophila Corby | 5 |
LPNE297246 ncbi | Legionella pneumophila Paris | 5 |
LPNE297245 ncbi | Legionella pneumophila Lens | 5 |
LPNE272624 ncbi | Legionella pneumophila pneumophila Philadelphia 1 | 5 |
LCHO395495 ncbi | Leptothrix cholodnii SP-6 | 5 |
KPNE272620 ncbi | Klebsiella pneumoniae pneumoniae MGH 78578 | 5 |
JSP375286 ncbi | Janthinobacterium sp. Marseille | 5 |
JSP290400 ncbi | Jannaschia sp. CCS1 | 4 |
ILOI283942 ncbi | Idiomarina loihiensis L2TR | 5 |
HSOM228400 ncbi | Haemophilus somnus 2336 | 5 |
HSOM205914 ncbi | Haemophilus somnus 129PT | 5 |
HNEP81032 | Hyphomonas neptunium | 4 |
HINF71421 ncbi | Haemophilus influenzae Rd KW20 | 5 |
HINF374930 ncbi | Haemophilus influenzae PittEE | 5 |
HINF281310 ncbi | Haemophilus influenzae 86-028NP | 5 |
HHAL349124 ncbi | Halorhodospira halophila SL1 | 5 |
HDUC233412 ncbi | Haemophilus ducreyi 35000HP | 5 |
HCHE349521 ncbi | Hahella chejuensis KCTC 2396 | 5 |
HARS204773 ncbi | Herminiimonas arsenicoxydans | 5 |
GURA351605 ncbi | Geobacter uraniireducens Rf4 | 4 |
GTHE420246 ncbi | Geobacillus thermodenitrificans NG80-2 | 4 |
GSUL243231 ncbi | Geobacter sulfurreducens PCA | 4 |
GOXY290633 ncbi | Gluconobacter oxydans 621H | 4 |
GMET269799 ncbi | Geobacter metallireducens GS-15 | 4 |
GKAU235909 ncbi | Geobacillus kaustophilus HTA426 | 4 |
GBET391165 ncbi | Granulibacter bethesdensis CGDNIH1 | 5 |
FTUL458234 ncbi | Francisella tularensis holarctica FTNF002-00 | 5 |
FTUL418136 ncbi | Francisella tularensis tularensis WY96-3418 | 5 |
FTUL401614 ncbi | Francisella novicida U112 | 4 |
FTUL393115 ncbi | Francisella tularensis tularensis FSC198 | 4 |
FTUL393011 ncbi | Francisella tularensis holarctica OSU18 | 4 |
FTUL351581 | Francisella tularensis holarctica FSC200 | 5 |
FRANT ncbi | Francisella tularensis tularensis SCHU S4 | 4 |
FPHI484022 ncbi | Francisella philomiragia philomiragia ATCC 25017 | 4 |
ESP42895 | Enterobacter sp. | 4 |
ELIT314225 ncbi | Erythrobacter litoralis HTCC2594 | 4 |
EFER585054 ncbi | Escherichia fergusonii ATCC 35469 | 5 |
ECOO157 ncbi | Escherichia coli O157:H7 EDL933 | 5 |
ECOL83334 | Escherichia coli O157:H7 | 5 |
ECOL585397 ncbi | Escherichia coli ED1a | 5 |
ECOL585057 ncbi | Escherichia coli IAI39 | 5 |
ECOL585056 ncbi | Escherichia coli UMN026 | 5 |
ECOL585055 ncbi | Escherichia coli 55989 | 5 |
ECOL585035 ncbi | Escherichia coli S88 | 5 |
ECOL585034 ncbi | Escherichia coli IAI1 | 5 |
ECOL481805 ncbi | Escherichia coli ATCC 8739 | 5 |
ECOL469008 ncbi | Escherichia coli BL21(DE3) | 5 |
ECOL439855 ncbi | Escherichia coli SMS-3-5 | 5 |
ECOL413997 ncbi | Escherichia coli B str. REL606 | 5 |
ECOL409438 ncbi | Escherichia coli SE11 | 5 |
ECOL405955 ncbi | Escherichia coli APEC O1 | 5 |
ECOL364106 ncbi | Escherichia coli UTI89 | 5 |
ECOL362663 ncbi | Escherichia coli 536 | 5 |
ECOL331111 ncbi | Escherichia coli E24377A | 5 |
ECOL316407 ncbi | Escherichia coli K-12 substr. W3110 | 5 |
ECOL199310 ncbi | Escherichia coli CFT073 | 5 |
ECAR218491 ncbi | Pectobacterium atrosepticum SCRI1043 | 5 |
DVUL882 ncbi | Desulfovibrio vulgaris Hildenborough | 4 |
DSHI398580 ncbi | Dinoroseobacter shibae DFL 12 | 4 |
DRED349161 ncbi | Desulfotomaculum reducens MI-1 | 4 |
DPSY177439 ncbi | Desulfotalea psychrophila LSv54 | 5 |
DOLE96561 ncbi | Desulfococcus oleovorans Hxd3 | 4 |
DNOD246195 ncbi | Dichelobacter nodosus VCS1703A | 5 |
DDES207559 ncbi | Desulfovibrio desulfuricans desulfuricans G20 | 4 |
DARO159087 ncbi | Dechloromonas aromatica RCB | 5 |
CVIO243365 ncbi | Chromobacterium violaceum ATCC 12472 | 4 |
CVES412965 ncbi | Candidatus Vesicomyosocius okutanii HA | 5 |
CSP78 | Caulobacter sp. | 4 |
CSP501479 | Citreicella sp. SE45 | 5 |
CSAL290398 ncbi | Chromohalobacter salexigens DSM 3043 | 5 |
CRUT413404 ncbi | Candidatus Ruthia magnifica Cm (Calyptogena magnifica) | 5 |
CPSY167879 ncbi | Colwellia psychrerythraea 34H | 5 |
CJAP155077 | Cellvibrio japonicus | 5 |
CHYD246194 ncbi | Carboxydothermus hydrogenoformans Z-2901 | 4 |
CBUR434922 ncbi | Coxiella burnetii Dugway 5J108-111 | 5 |
CBUR360115 ncbi | Coxiella burnetii RSA 331 | 5 |
CBUR227377 ncbi | Coxiella burnetii RSA 493 | 5 |
CBLO291272 ncbi | Candidatus Blochmannia pennsylvanicus BPEN | 5 |
CBLO203907 ncbi | Candidatus Blochmannia floridanus | 4 |
CAULO ncbi | Caulobacter crescentus CB15 | 4 |
BVIE269482 ncbi | Burkholderia vietnamiensis G4 | 5 |
BTRI382640 ncbi | Bartonella tribocorum CIP 105476 | 4 |
BTHA271848 ncbi | Burkholderia thailandensis E264 | 5 |
BSUI470137 ncbi | Brucella suis ATCC 23445 | 4 |
BSUI204722 ncbi | Brucella suis 1330 | 4 |
BSUB ncbi | Bacillus subtilis subtilis 168 | 4 |
BSP376 | Bradyrhizobium sp. | 4 |
BSP36773 | Burkholderia sp. | 5 |
BSP107806 ncbi | Buchnera aphidicola APS (Acyrthosiphon pisum) | 5 |
BQUI283165 ncbi | Bartonella quintana Toulouse | 4 |
BPUM315750 ncbi | Bacillus pumilus SAFR-032 | 4 |
BPSE320373 ncbi | Burkholderia pseudomallei 668 | 5 |
BPSE320372 ncbi | Burkholderia pseudomallei 1710b | 5 |
BPSE272560 ncbi | Burkholderia pseudomallei K96243 | 5 |
BPET94624 | Bordetella petrii | 5 |
BPER257313 ncbi | Bordetella pertussis Tohama I | 5 |
BPAR257311 ncbi | Bordetella parapertussis 12822 | 5 |
BOVI236 | Brucella ovis | 4 |
BMEL359391 ncbi | Brucella melitensis biovar Abortus 2308 | 4 |
BMEL224914 ncbi | Brucella melitensis bv. 1 str. 16M | 4 |
BMAL320389 ncbi | Burkholderia mallei NCTC 10247 | 5 |
BMAL320388 ncbi | Burkholderia mallei SAVP1 | 5 |
BMAL243160 ncbi | Burkholderia mallei ATCC 23344 | 5 |
BJAP224911 ncbi | Bradyrhizobium japonicum USDA 110 | 5 |
BHEN283166 ncbi | Bartonella henselae Houston-1 | 4 |
BHAL272558 ncbi | Bacillus halodurans C-125 | 4 |
BCIC186490 | Candidatus Baumannia cicadellinicola | 5 |
BCEN331272 ncbi | Burkholderia cenocepacia HI2424 | 5 |
BCEN331271 ncbi | Burkholderia cenocepacia AU 1054 | 5 |
BCAN483179 ncbi | Brucella canis ATCC 23365 | 4 |
BBRO257310 ncbi | Bordetella bronchiseptica RB50 | 5 |
BBAC360095 ncbi | Bartonella bacilliformis KC583 | 4 |
BBAC264462 ncbi | Bdellovibrio bacteriovorus HD100 | 4 |
BAPH198804 ncbi | Buchnera aphidicola Sg (Schizaphis graminum) | 4 |
BAMB398577 ncbi | Burkholderia ambifaria MC40-6 | 5 |
BAMB339670 ncbi | Burkholderia ambifaria AMMD | 5 |
BABO262698 ncbi | Brucella abortus bv. 1 str. 9-941 | 4 |
ASP76114 ncbi | Aromatoleum aromaticum EbN1 | 5 |
ASP62977 ncbi | Acinetobacter sp. ADP1 | 4 |
ASP62928 ncbi | Azoarcus sp. BH72 | 5 |
ASP232721 ncbi | Acidovorax sp. JS42 | 5 |
ASAL382245 ncbi | Aeromonas salmonicida salmonicida A449 | 5 |
APLE434271 ncbi | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 5 |
APLE416269 ncbi | Actinobacillus pleuropneumoniae L20 | 5 |
AMET293826 ncbi | Alkaliphilus metalliredigens QYMF | 4 |
AHYD196024 | Aeromonas hydrophila dhakensis | 5 |
AFER243159 ncbi | Acidithiobacillus ferrooxidans ATCC 23270 | 5 |
AEHR187272 ncbi | Alkalilimnicola ehrlichii MLHE-1 | 5 |
ADEH290397 ncbi | Anaeromyxobacter dehalogenans 2CP-C | 5 |
ACRY349163 ncbi | Acidiphilium cryptum JF-5 | 4 |
ACAU438753 ncbi | Azorhizobium caulinodans ORS 571 | 4 |
ABOR393595 ncbi | Alcanivorax borkumensis SK2 | 5 |
ABAU360910 ncbi | Bordetella avium 197N | 5 |
AAVE397945 ncbi | Acidovorax citrulli AAC00-1 | 5 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 1.426e-7 | 20 | 92 |
Arrangment:Clusters | 0.0002762 | 15 | 17 |
Arrangment:Pairs | 0.0040497 | 63 | 112 |
Disease:Bubonic_plague | 0.0089474 | 6 | 6 |
Disease:Dysentery | 0.0089474 | 6 | 6 |
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever | 0.0001659 | 11 | 11 |
Endospores:No | 8.208e-12 | 58 | 211 |
Endospores:Yes | 0.0001669 | 12 | 53 |
GC_Content_Range4:0-40 | 1.478e-20 | 45 | 213 |
GC_Content_Range4:40-60 | 1.174e-6 | 130 | 224 |
GC_Content_Range4:60-100 | 4.265e-7 | 92 | 145 |
GC_Content_Range7:0-30 | 9.430e-9 | 4 | 47 |
GC_Content_Range7:30-40 | 3.263e-11 | 41 | 166 |
GC_Content_Range7:50-60 | 1.015e-9 | 77 | 107 |
GC_Content_Range7:60-70 | 2.653e-9 | 91 | 134 |
Genome_Size_Range5:0-2 | 7.809e-23 | 21 | 155 |
Genome_Size_Range5:4-6 | 1.363e-16 | 130 | 184 |
Genome_Size_Range5:6-10 | 0.0044025 | 30 | 47 |
Genome_Size_Range9:0-1 | 0.0019226 | 5 | 27 |
Genome_Size_Range9:1-2 | 2.148e-19 | 16 | 128 |
Genome_Size_Range9:4-5 | 4.049e-8 | 68 | 96 |
Genome_Size_Range9:5-6 | 2.659e-7 | 62 | 88 |
Genome_Size_Range9:6-8 | 0.0007335 | 27 | 38 |
Gram_Stain:Gram_Neg | 4.235e-34 | 223 | 333 |
Gram_Stain:Gram_Pos | 6.179e-18 | 25 | 150 |
Habitat:Specialized | 0.0000512 | 11 | 53 |
Motility:No | 9.321e-8 | 42 | 151 |
Motility:Yes | 2.963e-7 | 152 | 267 |
Optimal_temp.:25-30 | 2.512e-7 | 19 | 19 |
Optimal_temp.:35-37 | 0.0000332 | 13 | 13 |
Optimal_temp.:37 | 0.0002895 | 33 | 106 |
Oxygen_Req:Aerobic | 0.0064938 | 97 | 185 |
Oxygen_Req:Anaerobic | 5.707e-11 | 18 | 102 |
Oxygen_Req:Facultative | 4.570e-7 | 120 | 201 |
Pathogenic_in:Animal | 0.0040046 | 40 | 66 |
Salinity:Non-halophilic | 0.0038379 | 37 | 106 |
Shape:Coccobacillus | 0.0001659 | 11 | 11 |
Shape:Coccus | 0.0038706 | 27 | 82 |
Shape:Rod | 1.291e-12 | 200 | 347 |
Shape:Sphere | 0.0009330 | 2 | 19 |
Shape:Spiral | 0.0000135 | 4 | 34 |
Temp._range:Hyperthermophilic | 0.0000109 | 1 | 23 |
Temp._range:Mesophilic | 0.0003809 | 232 | 473 |
Temp._range:Psychrophilic | 0.0008229 | 9 | 9 |
Temp._range:Thermophilic | 7.920e-6 | 4 | 35 |
Org ID | Org Name | # genes in group found in org |
WPIP955 | Wolbachia pipientis | 1 |
WPIP80849 | Wolbachia endosymbiont of Brugia malayi | 1 |
UURE95667 | Ureaplasma urealyticum serovar 13 | 0 |
UURE95664 | Ureaplasma urealyticum serovar 10 | 0 |
UPAR505682 ncbi | Ureaplasma parvum serovar 3 str. ATCC 27815 | 0 |
UMET351160 ncbi | uncultured methanogenic archaeon RC-I | 1 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 1 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 1 |
TVOL273116 ncbi | Thermoplasma volcanium GSS1 | 1 |
TPEN368408 ncbi | Thermofilum pendens Hrk 5 | 0 |
TLET416591 ncbi | Thermotoga lettingae TMO | 0 |
TKOD69014 ncbi | Thermococcus kodakarensis KOD1 | 0 |
TERY203124 ncbi | Trichodesmium erythraeum IMS101 | 0 |
TELO197221 ncbi | Thermosynechococcus elongatus BP-1 | 0 |
TDEN326298 ncbi | Sulfurimonas denitrificans DSM 1251 | 1 |
TACI273075 ncbi | Thermoplasma acidophilum DSM 1728 | 1 |
STOK273063 ncbi | Sulfolobus tokodaii 7 | 0 |
SSP84588 ncbi | Synechococcus sp. WH 8102 | 0 |
SSP64471 ncbi | Synechococcus sp. CC9311 | 0 |
SSP321332 ncbi | Synechococcus sp. JA-2-3Ba(2-13) | 1 |
SSP321327 ncbi | Synechococcus sp. JA-3-3Ab | 1 |
SSP1148 ncbi | Synechocystis sp. PCC 6803 | 1 |
SSP1131 | Synechococcus sp. CC9605 | 0 |
SSOL273057 ncbi | Sulfolobus solfataricus P2 | 0 |
SRUB309807 ncbi | Salinibacter ruber DSM 13855 | 0 |
SMAR399550 ncbi | Staphylothermus marinus F1 | 0 |
SELO269084 ncbi | Synechococcus elongatus PCC 6301 | 0 |
SACI330779 ncbi | Sulfolobus acidocaldarius DSM 639 | 0 |
RSP357808 ncbi | Roseiflexus sp. RS-1 | 1 |
RSAL288705 ncbi | Renibacterium salmoninarum ATCC 33209 | 1 |
RPRO272947 ncbi | Rickettsia prowazekii Madrid E | 1 |
RCAS383372 ncbi | Roseiflexus castenholzii DSM 13941 | 1 |
PTOR263820 ncbi | Picrophilus torridus DSM 9790 | 1 |
PSP117 | Pirellula sp. | 1 |
PPEN278197 ncbi | Pediococcus pentosaceus ATCC 25745 | 1 |
PMOB403833 ncbi | Petrotoga mobilis SJ95 | 1 |
PMAR93060 ncbi | Prochlorococcus marinus MIT 9215 | 0 |
PMAR74547 ncbi | Prochlorococcus marinus MIT 9313 | 0 |
PMAR74546 ncbi | Prochlorococcus marinus MIT 9312 | 0 |
PMAR59920 ncbi | Prochlorococcus marinus NATL2A | 0 |
PMAR167555 ncbi | Prochlorococcus marinus NATL1A | 0 |
PMAR167546 ncbi | Prochlorococcus marinus MIT 9301 | 0 |
PMAR167542 ncbi | Prochlorococcus marinus MIT 9515 | 0 |
PMAR167540 | Prochlorococcus marinus pastoris MED4ax | 0 |
PMAR167539 ncbi | Prochlorococcus marinus marinus CCMP1375 | 0 |
PMAR146891 ncbi | Prochlorococcus marinus AS9601 | 0 |
PLUT319225 ncbi | Chlorobium luteolum DSM 273 | 1 |
PISL384616 ncbi | Pyrobaculum islandicum DSM 4184 | 0 |
PINT246198 | Prevotella intermedia 17 | 1 |
PHOR70601 ncbi | Pyrococcus horikoshii OT3 | 0 |
PGIN242619 ncbi | Porphyromonas gingivalis W83 | 1 |
PFUR186497 ncbi | Pyrococcus furiosus DSM 3638 | 0 |
PDIS435591 ncbi | Parabacteroides distasonis ATCC 8503 | 1 |
PAST100379 | Onion yellows phytoplasma | 0 |
PARS340102 ncbi | Pyrobaculum arsenaticum DSM 13514 | 0 |
PAER178306 ncbi | Pyrobaculum aerophilum IM2 | 0 |
PACN267747 ncbi | Propionibacterium acnes KPA171202 | 1 |
PABY272844 ncbi | Pyrococcus abyssi GE5 | 0 |
OTSU357244 ncbi | Orientia tsutsugamushi Boryong | 1 |
NSP103690 ncbi | Nostoc sp. PCC 7120 | 0 |
NSEN222891 ncbi | Neorickettsia sennetsu Miyayama | 1 |
NPHA348780 ncbi | Natronomonas pharaonis DSM 2160 | 1 |
NFAR247156 ncbi | Nocardia farcinica IFM 10152 | 1 |
MTHE349307 ncbi | Methanosaeta thermophila PT | 1 |
MTHE187420 ncbi | Methanothermobacter thermautotrophicus Delta H | 1 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 1 |
MSTA339860 ncbi | Methanosphaera stadtmanae DSM 3091 | 1 |
MSED399549 ncbi | Metallosphaera sedula DSM 5348 | 0 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 1 |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 0 |
MPEN272633 ncbi | Mycoplasma penetrans HF-2 | 0 |
MMYC272632 ncbi | Mycoplasma mycoides mycoides SC str. PG1 | 1 |
MMOB267748 ncbi | Mycoplasma mobile 163K | 1 |
MMAZ192952 ncbi | Methanosarcina mazei Go1 | 1 |
MMAR444158 ncbi | Methanococcus maripaludis C6 | 1 |
MMAR426368 ncbi | Methanococcus maripaludis C7 | 1 |
MMAR402880 ncbi | Methanococcus maripaludis C5 | 1 |
MMAR368407 ncbi | Methanoculleus marisnigri JR1 | 1 |
MMAR267377 ncbi | Methanococcus maripaludis S2 | 1 |
MLAB410358 ncbi | Methanocorpusculum labreanum Z | 1 |
MKAN190192 ncbi | Methanopyrus kandleri AV19 | 0 |
MJAN243232 ncbi | Methanocaldococcus jannaschii DSM 2661 | 1 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 0 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 0 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 0 |
MHUN323259 ncbi | Methanospirillum hungatei JF-1 | 1 |
MGEN243273 ncbi | Mycoplasma genitalium G37 | 0 |
MFLO265311 ncbi | Mesoplasma florum L1 | 1 |
MCAP340047 ncbi | Mycoplasma capricolum capricolum ATCC 27343 | 1 |
MBUR259564 ncbi | Methanococcoides burtonii DSM 6242 | 1 |
MBAR269797 ncbi | Methanosarcina barkeri Fusaro | 1 |
MART243272 ncbi | Mycoplasma arthritidis 158L3-1 | 0 |
MAER449447 ncbi | Microcystis aeruginosa NIES-843 | 0 |
MAEO419665 ncbi | Methanococcus aeolicus Nankai-3 | 1 |
MACE188937 ncbi | Methanosarcina acetivorans C2A | 1 |
LHEL405566 ncbi | Lactobacillus helveticus DPC 4571 | 1 |
LDEL390333 ncbi | Lactobacillus delbrueckii bulgaricus ATCC 11842 | 1 |
LDEL321956 ncbi | Lactobacillus delbrueckii bulgaricus ATCC BAA-365 | 1 |
LCAS321967 ncbi | Lactobacillus casei ATCC 334 | 1 |
LBRE387344 ncbi | Lactobacillus brevis ATCC 367 | 1 |
KRAD266940 ncbi | Kineococcus radiotolerans SRS30216 | 1 |
IHOS453591 ncbi | Ignicoccus hospitalis KIN4/I | 0 |
HWAL362976 ncbi | Haloquadratum walsbyi DSM 16790 | 1 |
HSP64091 ncbi | Halobacterium sp. NRC-1 | 1 |
HSAL478009 ncbi | Halobacterium salinarum R1 | 1 |
HPYL85963 ncbi | Helicobacter pylori J99 | 1 |
HPYL357544 ncbi | Helicobacter pylori HPAG1 | 1 |
HPY ncbi | Helicobacter pylori 26695 | 1 |
HMUK485914 ncbi | Halomicrobium mukohataei DSM 12286 | 1 |
HMAR272569 ncbi | Haloarcula marismortui ATCC 43049 | 1 |
HBUT415426 ncbi | Hyperthermus butylicus DSM 5456 | 0 |
HAUR316274 ncbi | Herpetosiphon aurantiacus ATCC 23779 | 1 |
HACI382638 ncbi | Helicobacter acinonychis Sheeba | 1 |
GVIO251221 ncbi | Gloeobacter violaceus PCC 7421 | 0 |
FSP106370 ncbi | Frankia sp. CcI3 | 1 |
FNOD381764 ncbi | Fervidobacterium nodosum Rt17-B1 | 1 |
FJOH376686 ncbi | Flavobacterium johnsoniae UW101 | 1 |
EFAE226185 ncbi | Enterococcus faecalis V583 | 1 |
DSP255470 ncbi | Dehalococcoides sp. CBDB1 | 1 |
DSP216389 ncbi | Dehalococcoides sp. BAV1 | 1 |
DRAD243230 ncbi | Deinococcus radiodurans R1 | 1 |
DETH243164 ncbi | Dehalococcoides ethenogenes 195 | 1 |
CTEP194439 ncbi | Chlorobium tepidum TLS | 0 |
CSUL444179 ncbi | Candidatus Sulcia muelleri GWSS | 0 |
CMET456442 ncbi | Candidatus Methanoregula boonei 6A8 | 1 |
CMAQ397948 ncbi | Caldivirga maquilingensis IC-167 | 0 |
CKOR374847 ncbi | Candidatus Korarchaeum cryptofilum OPF8 | 0 |
CJEJ360109 ncbi | Campylobacter jejuni doylei 269.97 | 1 |
CJEJ195099 ncbi | Campylobacter jejuni RM1221 | 1 |
CJEI306537 ncbi | Corynebacterium jeikeium K411 | 1 |
CHUT269798 ncbi | Cytophaga hutchinsonii ATCC 33406 | 1 |
CFET360106 ncbi | Campylobacter fetus fetus 82-40 | 1 |
CCON360104 ncbi | Campylobacter concisus 13826 | 1 |
BXEN266265 ncbi | Burkholderia xenovorans LB400 | 0 |
BTHE226186 ncbi | Bacteroides thetaiotaomicron VPI-5482 | 1 |
BLON206672 ncbi | Bifidobacterium longum NCC2705 | 1 |
BFRA295405 ncbi | Bacteroides fragilis YCH46 | 1 |
BFRA272559 ncbi | Bacteroides fragilis NCTC 9343 | 1 |
AYEL322098 ncbi | Aster yellows witches-broom phytoplasma AYWB | 0 |
AVAR240292 ncbi | Anabaena variabilis ATCC 29413 | 0 |
AURANTIMONAS | Aurantimonas manganoxydans SI85-9A1 | 0 |
ASP1667 | Arthrobacter sp. | 1 |
APHA212042 ncbi | Anaplasma phagocytophilum HZ | 1 |
APER272557 ncbi | Aeropyrum pernix K1 | 0 |
AMAR329726 ncbi | Acaryochloris marina MBIC11017 | 0 |
ALAI441768 ncbi | Acholeplasma laidlawii PG-8A | 0 |
AFUL224325 ncbi | Archaeoglobus fulgidus DSM 4304 | 1 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Aggregates | 0.0000522 | 8 | 9 |
Arrangment:Chains | 0.0074172 | 13 | 92 |
Arrangment:Pairs | 0.0000372 | 11 | 112 |
Arrangment:Singles | 0.0000126 | 88 | 286 |
Endospores:No | 9.085e-7 | 73 | 211 |
Endospores:Yes | 6.476e-6 | 1 | 53 |
GC_Content_Range4:60-100 | 0.0002247 | 19 | 145 |
GC_Content_Range7:40-50 | 0.0063073 | 37 | 117 |
GC_Content_Range7:60-70 | 0.0001020 | 16 | 134 |
Genome_Size_Range5:0-2 | 8.601e-12 | 68 | 155 |
Genome_Size_Range5:4-6 | 5.512e-11 | 14 | 184 |
Genome_Size_Range9:0-1 | 0.0000351 | 16 | 27 |
Genome_Size_Range9:1-2 | 3.000e-7 | 52 | 128 |
Genome_Size_Range9:3-4 | 0.0031947 | 9 | 77 |
Genome_Size_Range9:4-5 | 6.780e-6 | 7 | 96 |
Genome_Size_Range9:5-6 | 0.0000412 | 7 | 88 |
Gram_Stain:Gram_Neg | 7.907e-8 | 51 | 333 |
Gram_Stain:Gram_Pos | 0.0002264 | 20 | 150 |
Habitat:Aquatic | 9.734e-6 | 38 | 91 |
Habitat:Host-associated | 0.0021479 | 35 | 206 |
Habitat:Multiple | 0.0002892 | 26 | 178 |
Habitat:Specialized | 1.511e-7 | 29 | 53 |
Optimal_temp.:85 | 0.0028618 | 4 | 4 |
Oxygen_Req:Aerobic | 0.0016522 | 30 | 185 |
Oxygen_Req:Anaerobic | 1.141e-8 | 47 | 102 |
Oxygen_Req:Facultative | 0.0012478 | 33 | 201 |
Pathogenic_in:Animal | 0.0011355 | 6 | 66 |
Pathogenic_in:Human | 3.620e-7 | 26 | 213 |
Pathogenic_in:No | 4.361e-6 | 75 | 226 |
Salinity:Extreme_halophilic | 0.0008019 | 6 | 7 |
Shape:Filament | 0.0008019 | 6 | 7 |
Shape:Irregular_coccus | 8.000e-12 | 17 | 17 |
Shape:Oval | 0.0006524 | 5 | 5 |
Shape:Rod | 8.467e-15 | 42 | 347 |
Shape:Sphere | 8.528e-10 | 17 | 19 |
Temp._range:Hyperthermophilic | 1.746e-8 | 18 | 23 |
Temp._range:Mesophilic | 7.260e-7 | 90 | 473 |
Temp._range:Thermophilic | 0.0001333 | 18 | 35 |
Pathway or complex | # Orgs containing it | # of those orgs also containing candidate | Pearson Coeff |
GLYCOCAT-PWY (glycogen degradation I) | 246 | 224 | 0.7319 |
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate)) | 300 | 246 | 0.6980 |
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis) | 218 | 198 | 0.6613 |
PWY-5918 (heme biosynthesis I) | 272 | 226 | 0.6568 |
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic)) | 291 | 235 | 0.6547 |
PWY0-1319 (CDP-diacylglycerol biosynthesis II) | 296 | 236 | 0.6458 |
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I) | 286 | 231 | 0.6445 |
PWY-1269 (CMP-KDO biosynthesis I) | 325 | 249 | 0.6436 |
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I) | 195 | 182 | 0.6424 |
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I) | 225 | 196 | 0.6217 |
PHOSLIPSYN-PWY (phospholipid biosynthesis I) | 290 | 229 | 0.6191 |
TYRFUMCAT-PWY (tyrosine degradation I) | 184 | 171 | 0.6110 |
PWY-4041 (γ-glutamyl cycle) | 279 | 222 | 0.6084 |
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic)) | 183 | 168 | 0.5940 |
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation) | 149 | 147 | 0.5935 |
PWY-5913 (TCA cycle variation IV) | 301 | 230 | 0.5919 |
GLUTATHIONESYN-PWY (glutathione biosynthesis) | 339 | 247 | 0.5910 |
NAGLIPASYN-PWY (lipid IVA biosynthesis) | 348 | 250 | 0.5854 |
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic)) | 191 | 169 | 0.5681 |
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic)) | 255 | 201 | 0.5499 |
PWY-5084 (2-ketoglutarate dehydrogenase complex) | 326 | 234 | 0.5439 |
PWY-5028 (histidine degradation II) | 130 | 128 | 0.5416 |
ECASYN-PWY (enterobacterial common antigen biosynthesis) | 191 | 163 | 0.5262 |
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage) | 329 | 232 | 0.5224 |
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic)) | 398 | 259 | 0.5116 |
AST-PWY (arginine degradation II (AST pathway)) | 120 | 117 | 0.5057 |
LIPA-CORESYN-PWY (Lipid A-core biosynthesis) | 176 | 150 | 0.4951 |
PWY-5188 (tetrapyrrole biosynthesis I) | 439 | 271 | 0.4905 |
REDCITCYC (TCA cycle variation II) | 174 | 148 | 0.4891 |
CHOLINE-BETAINE-ANA-PWY (choline degradation I) | 135 | 124 | 0.4849 |
DAPLYSINESYN-PWY (lysine biosynthesis I) | 342 | 231 | 0.4790 |
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis) | 156 | 136 | 0.4787 |
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria)) | 138 | 125 | 0.4782 |
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I) | 422 | 263 | 0.4773 |
PWY0-501 (lipoate biosynthesis and incorporation I) | 385 | 248 | 0.4724 |
P344-PWY (acrylonitrile degradation) | 210 | 165 | 0.4674 |
PWY-5148 (acyl-CoA hydrolysis) | 227 | 174 | 0.4671 |
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I) | 249 | 184 | 0.4583 |
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff) | 249 | 184 | 0.4583 |
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer) | 112 | 106 | 0.4579 |
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer) | 96 | 95 | 0.4544 |
PWY-5340 (sulfate activation for sulfonation) | 385 | 245 | 0.4525 |
PWY-5669 (phosphatidylethanolamine biosynthesis I) | 416 | 257 | 0.4515 |
PWY-5386 (methylglyoxal degradation I) | 305 | 208 | 0.4381 |
KDOSYN-PWY (KDO transfer to lipid IVA I) | 180 | 144 | 0.4361 |
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis) | 365 | 234 | 0.4345 |
P601-PWY (D-camphor degradation) | 95 | 92 | 0.4336 |
GLUCONSUPER-PWY (D-gluconate degradation) | 229 | 170 | 0.4334 |
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis) | 179 | 143 | 0.4330 |
PWY-3162 (tryptophan degradation V (side chain pathway)) | 94 | 91 | 0.4306 |
VALDEG-PWY (valine degradation I) | 290 | 199 | 0.4254 |
PWY-5938 ((R)-acetoin biosynthesis I) | 376 | 237 | 0.4240 |
PWY-46 (putrescine biosynthesis III) | 138 | 118 | 0.4239 |
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis) | 458 | 268 | 0.4215 |
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway) | 374 | 235 | 0.4163 |
ARO-PWY (chorismate biosynthesis I) | 510 | 283 | 0.4086 |
GALACTCAT-PWY (D-galactonate degradation) | 104 | 95 | 0.4082 |
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis) | 300 | 200 | 0.4015 |
SO4ASSIM-PWY (sulfate reduction I (assimilatory)) | 311 | 205 | 0.4009 |
PWY-6389 ((S)-acetoin biosynthesis) | 368 | 230 | 0.4000 |
EG11553 | EG11507 | EG11015 | EG10914 | |
EG12095 | 0.999441 | 0.999289 | 0.999878 | 0.999361 |
EG11553 | 0.999684 | 0.999143 | 0.998505 | |
EG11507 | 0.998751 | 0.998823 | ||
EG11015 | 0.998853 | |||
EG10914 |
EG12095 | EG11553 | EG11507 | EG11015 | EG10914 | |
EG12095 | 0.0f0 | - | - | - | - |
EG11553 | - | 0.0f0 | - | - | - |
EG11507 | - | - | 0.0f0 | - | - |
EG11015 | - | - | - | 0.0f0 | - |
EG10914 | - | - | - | - | 0.0f0 |