CANDIDATE ID: 587

CANDIDATE ID: 587

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9932310e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11178 (rbfA) (b3167)
   Products of gene:
     - EG11178-MONOMER (30S ribosome binding factor)

- EG11177 (truB) (b3166)
   Products of gene:
     - EG11177-MONOMER (tRNA pseudouridine 55 synthase)
       Reactions:
        tRNA uridine  ->  tRNA pseudouridine

- EG11079 (ribF) (b0025)
   Products of gene:
     - RIBF-MONOMER (bifunctional riboflavin kinase / FMN adenylyltransferase)
       Reactions:
        riboflavin + ATP  ->  FMN + ADP + 2 H+
         In pathways
         PWY-5523 (PWY-5523)
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6168 (PWY-6168)
         PWY66-366 (PWY66-366)
        FMN + ATP  ->  FAD + diphosphate
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)
         PWY66-366 (PWY66-366)

- EG10914 (rpsO) (b3165)
   Products of gene:
     - EG10914-MONOMER (30S ribosomal subunit protein S15)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10786 (ptrA) (b2821)
   Products of gene:
     - EG10786-MONOMER (protease III)
       Reactions:
        EC# 3.4.24.55



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 337
Effective number of orgs (counting one per cluster within 468 clusters): 241

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM45
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP1755 Thermoanaerobacter sp.4
TROS309801 ncbi Thermomicrobium roseum DSM 51594
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TFUS269800 ncbi Thermobifida fusca YX4
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STRO369723 ncbi Salinispora tropica CNB-4404
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP94122 ncbi Shewanella sp. ANA-35
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP1148 ncbi Synechocystis sp. PCC 68034
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-404
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SARE391037 ncbi Salinispora arenicola CNS-2055
SAGA211110 ncbi Streptococcus agalactiae NEM3164
SAGA208435 ncbi Streptococcus agalactiae 2603V/R4
SAGA205921 ncbi Streptococcus agalactiae A9094
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
RCAS383372 ncbi Roseiflexus castenholzii DSM 139414
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.5
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K55
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-45
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP35761 Nocardioides sp.5
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
MXAN246197 ncbi Myxococcus xanthus DK 16225
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC14
MSME246196 ncbi Mycobacterium smegmatis MC2 1554
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MLEP272631 ncbi Mycobacterium leprae TN4
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LXYL281090 ncbi Leifsonia xyli xyli CTCB074
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53344
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LINN272626 ncbi Listeria innocua Clip112624
LCHO395495 ncbi Leptothrix cholodnii SP-64
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)4
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FSP1855 Frankia sp. EAN1pec5
FSP106370 ncbi Frankia sp. CcI35
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FALN326424 ncbi Frankia alni ACN14a5
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSP255470 ncbi Dehalococcoides sp. CBDB14
DSP216389 ncbi Dehalococcoides sp. BAV14
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-15
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DETH243164 ncbi Dehalococcoides ethenogenes 1954
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)5
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPHY357809 ncbi Clostridium phytofermentans ISDg4
CPER289380 ncbi Clostridium perfringens SM1015
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CNOV386415 ncbi Clostridium novyi NT4
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3824
CMIC31964 ncbi Clavibacter michiganensis sepedonicus4
CKLU431943 ncbi Clostridium kluyveri DSM 5554
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CDIF272563 ncbi Clostridium difficile 6305
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN4
CBLO203907 ncbi Candidatus Blochmannia floridanus4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CAULO ncbi Caulobacter crescentus CB154
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)4
BQUI283165 ncbi Bartonella quintana Toulouse4
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-14
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K165
BCIC186490 Candidatus Baumannia cicadellinicola4
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1005
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)4
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASP1667 Arthrobacter sp.4
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis5
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N4
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAUR290340 ncbi Arthrobacter aurescens TC15


Names of the homologs of the genes in the group in each of these orgs
  EG11178   EG11177   EG11079   EG10914   EG10786   
ZMOB264203 ZMO0553ZMO0551ZMO0322ZMO0550ZMO1890
YPSE349747 YPSIP31758_3595YPSIP31758_3594YPSIP31758_3461YPSIP31758_3593YPSIP31758_0990
YPSE273123 YPTB0481YPTB0482YPTB0616YPTB0483YPTB3026
YPES386656 YPDSF_3544YPDSF_3543YPDSF_3158YPDSF_3542YPDSF_1696
YPES377628 YPN_3239YPN_3238YPN_0346YPN_3237YPN_2982
YPES360102 YPA_0045YPA_0044YPA_4067YPA_0043YPA_0491
YPES349746 YPANGOLA_A3994YPANGOLA_A3995YPANGOLA_A0791YPANGOLA_A3996YPANGOLA_A3232
YPES214092 YPO3495YPO3494YPO0474YPO3493YPO1019
YPES187410 Y0689Y0690Y3701Y0691Y3165
YENT393305 YE0435YE0436YE0615YE0437YE3311
XORY360094 XOOORF_3572XOOORF_3571XOOORF_1573XOOORF_3570
XORY342109 XOO3050XOO3049XOO1511XOO3048
XORY291331 XOO3217XOO3216XOO1625XOO3215
XFAS405440 XFASM12_0204XFASM12_0205XFASM12_1579XFASM12_0206
XFAS183190 PD_0195PD_0196PD_1438PD_0197PD_1853
XFAS160492 XF0236XF0237XF2419XF0238
XCAM487884 XCC-B100_1650XCC-B100_1651XCC-B100_3184XCC-B100_1652
XCAM316273 XCAORF_2839XCAORF_2838XCAORF_1383XCAORF_2837
XCAM314565 XC_1606XC_1607XC_3088XC_1608
XCAM190485 XCC2510XCC2509XCC1154XCC2508
XAXO190486 XAC2686XAC2685XAC1253XAC2684
XAUT78245 XAUT_0292XAUT_0291XAUT_1843XAUT_0289XAUT_2204
VVUL216895 VV1_1697VV1_1698VV1_0508VV1_1701VV1_1977
VVUL196600 VV2707VV2706VV0686VV2705VV2439
VPAR223926 VP2455VP2454VP0533VP2453VP2206
VFIS312309 VF0487VF0488VF0466VF0489VF1809
VEIS391735 VEIS_2748VEIS_2747VEIS_2108VEIS_2818VEIS_4762
VCHO345073 VC0395_A0175VC0395_A0176VC0395_A0213VC0395_A0177VC0395_A1660
VCHO VC0644VC0645VC0681VC0646VC2072
TTUR377629 TERTU_3216TERTU_3215TERTU_1039TERTU_3214TERTU_1027
TTEN273068 TTE1392TTE1390TTE1389TTE1388
TSP1755 TETH514_1644TETH514_1642TETH514_1641TETH514_1640
TROS309801 TRD_0772TRD_0769TRD_0624TRD_1505
TPSE340099 TETH39_1208TETH39_1206TETH39_1205TETH39_1204TETH39_1201
TFUS269800 TFU_0780TFU_0781TFU_0783TFU_2363
TDEN292415 TBD_0696TBD_0695TBD_1856TBD_0694TBD_0377
TCRU317025 TCR_1124TCR_1125TCR_0494TCR_1128
SWOL335541 SWOL_0901SWOL_0903SWOL_0904SWOL_0905
STYP99287 STM3285STM3284STM0045STM3283STM2995
STRO369723 STROP_1372STROP_1379STROP_1380STROP_1382
STHE292459 STH1523STH1525STH1526STH1528STH1532
SSP94122 SHEWANA3_1031SHEWANA3_1032SHEWANA3_3137SHEWANA3_1033SHEWANA3_1465
SSP321332 CYB_0200CYB_2212CYB_2202CYB_0732
SSP321327 CYA_0776CYA_1338CYA_2407CYA_2171
SSP1148 SLL0754SLR0457SLR1882SLL0055
SSON300269 SSO_3313SSO_3312SSO_0030SSO_3311SSO_2978
SSED425104 SSED_3388SSED_3387SSED_1193SSED_3386SSED_1634
SSAP342451 SSP1495SSP1494SSP1493SSP1492
SPRO399741 SPRO_0490SPRO_0491SPRO_0697SPRO_0492SPRO_3815
SPEA398579 SPEA_3059SPEA_3058SPEA_1082SPEA_3057SPEA_2592
SONE211586 SO_1205SO_1206SO_3533SO_1207SO_3083
SLOI323850 SHEW_2826SHEW_2825SHEW_1098SHEW_2824SHEW_2420
SLAC55218 SL1157_1312SL1157_1981SL1157_1309SL1157_0158
SHIGELLA RBFATRUBRIBFRPSOPTR
SHAL458817 SHAL_3146SHAL_3145SHAL_1130SHAL_3144SHAL_2664
SHAE279808 SH1644SH1642SH1641SH1640
SGLO343509 SG0378SG0379SG0413SG0380SG1974
SFUM335543 SFUM_1230SFUM_1232SFUM_3182SFUM_1233
SFLE373384 SFV_3197SFV_3196SFV_0019SFV_3195SFV_2899
SFLE198214 AAN44675.1AAN44674.1AAN41687.1AAN44673.1AAN44319.1
SERY405948 SACE_5924SACE_5919SACE_5918SACE_5915
SEPI176280 SE_0947SE_0948SE_0949SE_0950
SEPI176279 SERP0837SERP0838SERP0839SERP0840
SENT454169 SEHA_C3580SEHA_C3579SEHA_C0048SEHA_C3577SEHA_C3207
SENT321314 SCH_3226SCH_3225SCH_0039SCH_3224SCH_2933
SENT295319 SPA3153SPA3152SPA0046SPA3151SPA2860
SENT220341 STY3466STY3465STY0054STY3464STY3133
SENT209261 T3203T3202T0047T3201T2903
SDYS300267 SDY_3346SDY_3345SDY_0047SDY_3344SDY_3038
SDEN318161 SDEN_1008SDEN_1009SDEN_2724SDEN_1010SDEN_1533
SDEG203122 SDE_2707SDE_2706SDE_2567SDE_2705
SCO SCO5708SCO5711SCO5736SCO5738
SBOY300268 SBO_3215SBO_3216SBO_0024SBO_3217SBO_2711
SBAL402882 SHEW185_3279SHEW185_3278SHEW185_1120SHEW185_3277SHEW185_2773
SBAL399599 SBAL195_3416SBAL195_3415SBAL195_1155SBAL195_3414SBAL195_2850
SAVE227882 SAV2549SAV2546SAV2524SAV2422
SARE391037 SARE_1329SARE_1336SARE_1337SARE_1338SARE_1340
SAGA211110 GBS0418GBS1033GBS1032GBS0197
SAGA208435 SAG_0382SAG_0998SAG_0997SAG_0202
SAGA205921 SAK_0456SAK_1093SAK_1092SAK_0265
SACI56780 SYN_01785SYN_01783SYN_01948SYN_01782
RSPH349101 RSPH17029_2770RSPH17029_0979RSPH17029_2773RSPH17029_2760
RSPH272943 RSP_1108RSP_2304RSP_1111RSP_1097
RSOL267608 RSC1290RSC1291RSC2457RSC2069RSC0387
RRUB269796 RRU_A3783RRU_A2965RRU_A3784RRU_A2972
RPOM246200 SPO_3837SPO_3154SPO_3840SPO_3070
RPAL316058 RPB_0603RPB_4186RPB_0604RPB_4179
RPAL316057 RPD_0229RPD_4040RPD_0228RPD_4035
RPAL316056 RPC_0482RPC_1399RPC_0483RPC_1392
RPAL316055 RPE_0194RPE_1410RPE_0193RPE_1417
RPAL258594 RPA0434RPA4379RPA0433RPA4374
RMET266264 RMET_2030RMET_2029RMET_2884RMET_0921RMET_0282
RLEG216596 RL0123RL0886RL0121RL1061
RFER338969 RFER_2135RFER_2136RFER_1433RFER_1488
REUT381666 H16_A2305H16_A2304H16_A3045H16_A1044H16_A0364
REUT264198 REUT_A2027REUT_A2026REUT_A2744REUT_A0956
RETL347834 RHE_CH00114RHE_CH00831RHE_CH00112RHE_CH00978
RDEN375451 RD1_0647RD1_3523RD1_0642RD1_2142
RCAS383372 RCAS_1131RCAS_1128RCAS_1127RCAS_1147
PTHE370438 PTH_1270PTH_1272PTH_1273PTH_1274PTH_1278
PSYR223283 PSPTO_4489PSPTO_4488PSPTO_0805PSPTO_4487PSPTO_0514
PSYR205918 PSYR_4179PSYR_4178PSYR_0709PSYR_4177PSYR_4669
PSTU379731 PST_3309PST_3308PST_0963PST_3307PST_1978
PSP56811 PSYCPRWF_0158PSYCPRWF_0159PSYCPRWF_0627PSYCPRWF_0163PSYCPRWF_1782
PSP312153 PNUC_1226PNUC_1225PNUC_1739PNUC_1056PNUC_1927
PSP296591 BPRO_2427BPRO_2428BPRO_3848BPRO_3261
PPUT76869 PPUTGB1_4711PPUTGB1_4710PPUTGB1_0648PPUTGB1_4709PPUTGB1_0409
PPUT351746 PPUT_4576PPUT_4575PPUT_0643PPUT_4574PPUT_0405
PPUT160488 PP_4711PP_4710PP_0602PP_4709PP_0381
PPRO298386 PBPRA0613PBPRA0614PBPRA0590PBPRA0615PBPRA0963
PNAP365044 PNAP_2010PNAP_2009PNAP_3228PNAP_1419
PMUL272843 PM0757PM0756PM1661PM0301PM0804
PMEN399739 PMEN_3607PMEN_3606PMEN_0952PMEN_3605PMEN_1937
PLUM243265 PLU4528PLU4527PLU0590PLU4526PLU0631
PING357804 PING_0818PING_0819PING_3272PING_0824PING_3480
PHAL326442 PSHAA0998PSHAA0999PSHAA0917PSHAA1000PSHAB0349
PFLU220664 PFL_0845PFL_0846PFL_5322PFL_0847PFL_5672
PFLU216595 PFLU5252PFLU5251PFLU0767PFLU5250PFLU5597
PFLU205922 PFL_0780PFL_0781PFL_4853PFL_0782PFL_5156
PENT384676 PSEEN0796PSEEN0797PSEEN4693PSEEN0798PSEEN0399
PCRY335284 PCRYO_0075PCRYO_0076PCRYO_2042PCRYO_0079PCRYO_1482
PCAR338963 PCAR_1557PCAR_1559PCAR_2151PCAR_1560PCAR_1562
PATL342610 PATL_1696PATL_1697PATL_3179PATL_1698PATL_1666
PARC259536 PSYC_0070PSYC_0071PSYC_1761PSYC_0073PSYC_0932
PAER208964 PA4743PA4742PA4561PA4741PA1973
PAER208963 PA14_62740PA14_62730PA14_60380PA14_62720PA14_39010
OIHE221109 OB1600OB1601OB1603OB1606
OCAR504832 OCAR_4505OCAR_7232OCAR_4504OCAR_7238
OANT439375 OANT_0745OANT_3030OANT_0744OANT_3038
NWIN323098 NWI_0026NWI_2541NWI_0027NWI_2545
NSP35761 NOCA_3189NOCA_3188NOCA_3187NOCA_3178NOCA_3176
NOCE323261 NOC_2119NOC_2118NOC_2035NOC_2117NOC_1933
NMUL323848 NMUL_A1863NMUL_A1862NMUL_A2653NMUL_A2554NMUL_A2737
NMEN374833 NMCC_1285NMCC_1286NMCC_0388NMCC_0556
NMEN272831 NMC1308NMC1309NMC0382NMC0552
NMEN122587 NMA1586NMA1588NMA0621NMA0815
NMEN122586 NMB_1373NMB_1374NMB_1834NMB_0609
NHAM323097 NHAM_0033NHAM_3161NHAM_0034NHAM_3165
NGON242231 NGO0644NGO0642NGO0068NGO0191
NEUT335283 NEUT_1645NEUT_1644NEUT_1440NEUT_2156NEUT_1530
NEUR228410 NE0762NE0763NE1150NE0173NE1416
MXAN246197 MXAN_2070MXAN_2071MXAN_5789MXAN_2072MXAN_5035
MTHE264732 MOTH_1051MOTH_1053MOTH_1054MOTH_1055MOTH_1059
MSUC221988 MS1442MS1441MS1752MS0699
MSP409 M446_2609M446_2222M446_4915M446_4178
MSP400668 MMWYL1_1028MMWYL1_1029MMWYL1_4231MMWYL1_1030MMWYL1_2863
MSP266779 MESO_3932MESO_0424MESO_3934MESO_0759
MSME246196 MSMEG_2649MSMEG_2653MSMEG_2654MSMEG_2657
MPET420662 MPE_A1920MPE_A1919MPE_A3045MPE_A1398
MMAG342108 AMB4070AMB4115AMB0832AMB4116
MLOT266835 MLR5557MLR5558MLR8243MSR5561MLL7516
MLEP272631 ML1546ML0852ML0853ML0855
MFLA265072 MFLA_0068MFLA_0069MFLA_2209MFLA_0070MFLA_0734
MEXT419610 MEXT_2696MEXT_2695MEXT_0420MEXT_4028MEXT_2328
MCAP243233 MCA_1314MCA_1313MCA_2252MCA_1310MCA_0063
MAQU351348 MAQU_3347MAQU_3346MAQU_0861MAQU_3345MAQU_2509
LXYL281090 LXX07250LXX07280LXX08990LXX16180
LWEL386043 LWE1342LWE1343LWE1344LWE1345
LSPH444177 BSPH_1600BSPH_1601BSPH_1602BSPH_1603
LPNE400673 LPC_3056LPC_3055LPC_2354LPC_3054LPC_0467
LPNE297246 LPP2819LPP2818LPP0998LPP2817LPP2725
LPNE297245 LPL2688LPL2687LPL0967LPL2686LPL2598
LPNE272624 LPG2771LPG2770LPG0936LPG2769LPG2671
LMON265669 LMOF2365_1344LMOF2365_1345LMOF2365_1346LMOF2365_1347
LMON169963 LMO1327LMO1328LMO1329LMO1330
LINN272626 LIN1364LIN1365LIN1366LIN1367
LCHO395495 LCHO_1702LCHO_1703LCHO_1237LCHO_1496
LBIF456481 LEPBI_I1526LEPBI_I3078LEPBI_I1528LEPBI_I1530
LBIF355278 LBF_1473LBF_2969LBF_1475LBF_1477
KPNE272620 GKPORF_B2909GKPORF_B2908GKPORF_B4285GKPORF_B2907GKPORF_B2571
JSP375286 MMA_2494MMA_2493MMA_0829MMA_1458MMA_3139
JSP290400 JANN_4034JANN_3365JANN_4030JANN_4045
ILOI283942 IL0967IL0966IL1129IL0965IL2336
HSOM228400 HSM_1291HSM_1292HSM_0056HSM_0776
HSOM205914 HS_0822HS_0823HS_0188HS_0477
HMOD498761 HM1_2315HM1_2317HM1_2318HM1_2321HM1_2325
HINF71421 HI_1288HI_1289HI_0963HI_1468
HINF374930 CGSHIEE_04185CGSHIEE_04190CGSHIEE_07145CGSHIEE_04970
HINF281310 NTHI1835NTHI1834NTHI1136NTHI1652
HHAL349124 HHAL_1748HHAL_1747HHAL_1837HHAL_1746
HDUC233412 HD_1460HD_1459HD_0273HD_1738HD_0187
HCHE349521 HCH_01240HCH_01241HCH_05934HCH_01243HCH_05001
HARS204773 HEAR2432HEAR2431HEAR0846HEAR1830HEAR2903
GURA351605 GURA_1902GURA_1904GURA_2686GURA_1905
GTHE420246 GTNG_1119GTNG_1120GTNG_1121GTNG_1122GTNG_1125
GSUL243231 GSU_1589GSU_1591GSU_1487GSU_1592GSU_1594
GOXY290633 GOX1583GOX1245GOX1585GOX1867
GMET269799 GMET_1587GMET_1589GMET_1388GMET_1590GMET_1592
GKAU235909 GK1265GK1266GK1267GK1268GK1271
GBET391165 GBCGDNIH1_2353GBCGDNIH1_0467GBCGDNIH1_2352GBCGDNIH1_2254
FTUL458234 FTA_1915FTA_0588FTA_0459FTA_1622
FTUL418136 FTW_0127FTW_0373FTW_1263FTW_1545
FTUL401614 FTN_1659FTN_1462FTN_0442FTN_0608
FTUL393115 FTF0051FTF1554CFTF0916CFTF0698
FTUL393011 FTH_1745FTH_0556FTH_0429FTH_1488
FTUL351581 FTL_1808FTL_0555FTL_0437FTL_1538
FSP1855 FRANEAN1_1184FRANEAN1_1186FRANEAN1_1187FRANEAN1_1188FRANEAN1_0931
FSP106370 FRANCCI3_3560FRANCCI3_3558FRANCCI3_3557FRANCCI3_3556FRANCCI3_3796
FRANT RBFATRUBRIBFRPSO
FPHI484022 FPHI_0949FPHI_1212FPHI_0395FPHI_0233
FALN326424 FRAAL5758FRAAL5756FRAAL5755FRAAL5754FRAAL6042
ESP42895 ENT638_3604ENT638_3603ENT638_0583ENT638_3602ENT638_3264
EFER585054 EFER_3146EFER_3145EFER_0017EFER_3144EFER_2754
ECOO157 RBFATRUBRIBFRPSOPTR
ECOL83334 ECS4048ECS4047ECS0028ECS4046ECS3678
ECOL585397 ECED1_3827ECED1_3826ECED1_0022ECED1_3825ECED1_3277
ECOL585057 ECIAI39_3664ECIAI39_3663ECIAI39_0026ECIAI39_3662ECIAI39_3240
ECOL585056 ECUMN_3649ECUMN_3648ECUMN_0025ECUMN_3647ECUMN_3148
ECOL585055 EC55989_3587EC55989_3586EC55989_0024EC55989_3585EC55989_3097
ECOL585035 ECS88_3551ECS88_3550ECS88_0024ECS88_3549ECS88_3116
ECOL585034 ECIAI1_3317ECIAI1_3316ECIAI1_0026ECIAI1_3315ECIAI1_2929
ECOL481805 ECOLC_0531ECOLC_0532ECOLC_3630ECOLC_0533ECOLC_0894
ECOL469008 ECBD_0573ECBD_0574ECBD_3591ECBD_0575ECBD_0904
ECOL439855 ECSMS35_3463ECSMS35_3462ECSMS35_0023ECSMS35_3461ECSMS35_2968
ECOL413997 ECB_03034ECB_03033ECB_00029ECB_03032ECB_02669
ECOL409438 ECSE_3453ECSE_3452ECSE_0023ECSE_3451ECSE_3078
ECOL405955 APECO1_3263APECO1_3264APECO1_1958APECO1_3265APECO1_3684
ECOL364106 UTI89_C3597UTI89_C3596UTI89_C0027UTI89_C3595UTI89_C3222
ECOL362663 ECP_3255ECP_3254ECP_0023ECP_3253ECP_2833
ECOL331111 ECE24377A_3651ECE24377A_3650ECE24377A_0025ECE24377A_3649ECE24377A_3141
ECOL316407 ECK3156:JW3136:B3167ECK3155:JW3135:B3166ECK0026:JW0023:B0025ECK3154:JW3134:B3165ECK2817:JW2789:B2821
ECOL199310 C3923C3922C0029C3921C3415
ECAR218491 ECA0713ECA0714ECA3877ECA0715ECA0994
DSP255470 CBDBA946CBDBA945CBDBA584CBDBA1394
DSP216389 DEHABAV1_0873DEHABAV1_0872DEHABAV1_0577DEHABAV1_1237
DSHI398580 DSHI_3042DSHI_2927DSHI_2994DSHI_0361
DRED349161 DRED_1956DRED_1954DRED_1953DRED_1951DRED_1947
DPSY177439 DP2612DP2610DP1094DP2609
DOLE96561 DOLE_3033DOLE_3031DOLE_2234DOLE_3030
DHAF138119 DSY2516DSY2514DSY2513DSY2512DSY2506
DETH243164 DET_0982DET_0981DET_0602DET_1429
DARO159087 DARO_2451DARO_2450DARO_3047DARO_2449
CVIO243365 CV_1463CV_1464CV_3570CV_1465
CVES412965 COSY_0060COSY_0061COSY_0016COSY_0279
CSP78 CAUL_0039CAUL_4052CAUL_0040CAUL_3734
CSP501479 CSE45_4187CSE45_0133CSE45_4136CSE45_0540
CSAL290398 CSAL_3073CSAL_3072CSAL_0480CSAL_3071CSAL_3023
CRUT413404 RMAG_0055RMAG_0056RMAG_0016RMAG_0293RMAG_0778
CPSY167879 CPS_2204CPS_2205CPS_1181CPS_2206CPS_2134
CPHY357809 CPHY_2773CPHY_2771CPHY_2770CPHY_2767
CPER289380 CPR_1657CPR_1655CPR_1654CPR_1653CPR_1890
CPER195103 CPF_1939CPF_1937CPF_1936CPF_1935CPF_2179
CPER195102 CPE1685CPE1683CPE1682CPE1681CPE1924
CNOV386415 NT01CX_2135NT01CX_2133NT01CX_2132NT01CX_2131
CMIC443906 CMM_2148CMM_2141CMM_2048CMM_2042
CMIC31964 CMS1842CMS1835CMS1185CMS1192
CKLU431943 CKL_1432CKL_1434CKL_1436CKL_1438
CJAP155077 CJA_0437CJA_0438CJA_3218CJA_0439CJA_3166
CHYD246194 CHY_1765CHY_1762CHY_1760CHY_1148
CDIF272563 CD1310CD1314CD1315CD1316CD1320
CDES477974 DAUD_0927DAUD_0929DAUD_0930DAUD_0936
CBUR434922 COXBU7E912_0564COXBU7E912_0565COXBU7E912_1675COXBU7E912_0916COXBU7E912_0217
CBUR360115 COXBURSA331_A1599COXBURSA331_A1598COXBURSA331_A0503COXBURSA331_A1099COXBURSA331_A2107
CBUR227377 CBU_1431CBU_1430CBU_0391CBU_0851CBU_1902
CBOT536232 CLM_2710CLM_2708CLM_2707CLM_2706CLM_2704
CBOT515621 CLJ_B2642CLJ_B2640CLJ_B2639CLJ_B2638CLJ_B2636
CBOT508765 CLL_A1274CLL_A1276CLL_A1278CLL_A1280
CBOT498213 CLD_2223CLD_2225CLD_2226CLD_2227CLD_2229
CBOT441772 CLI_2473CLI_2471CLI_2470CLI_2469CLI_2467
CBOT441770 CLB_2281CLB_2279CLB_2278CLB_2277CLB_2275
CBOT36826 CBO2417ACBO2416CBO2415CBO2414CBO2412
CBLO291272 BPEN_109BPEN_110BPEN_121BPEN_111
CBLO203907 BFL105BFL106BFL117BFL107
CBEI290402 CBEI_1203CBEI_1205CBEI_1207CBEI_2401
CAULO CC0036CC0703CC0035CC2638
CACE272562 CAC1803CAC1805CAC1807CAC2411
BWEI315730 BCERKBAB4_3633BCERKBAB4_3632BCERKBAB4_3631BCERKBAB4_3630BCERKBAB4_3627
BVIE269482 BCEP1808_1467BCEP1808_1468BCEP1808_2589BCEP1808_2339
BTRI382640 BT_0237BT_1685BT_0233BT_0662
BTHU412694 BALH_3439BALH_3438BALH_3437BALH_3436BALH_3433
BTHU281309 BT9727_3552BT9727_3551BT9727_3550BT9727_3549BT9727_3546
BTHA271848 BTH_I2563BTH_I2562BTH_I0771BTH_I1055
BSUI470137 BSUIS_A2004BSUIS_B0204BSUIS_A2005BSUIS_B0211
BSUI204722 BR_2167BR_A0201BR_2168BR_0483
BSUB BSU16650BSU16660BSU16670BSU16680BSU16710
BSP376 BRADO0055BRADO6066BRADO0056BRADO6070
BSP36773 BCEP18194_A4642BCEP18194_A4643BCEP18194_A5843BCEP18194_A5582
BSP107806 BU376BU375BU150BU374
BQUI283165 BQ02010BQ10470BQ01990BQ03660
BPUM315750 BPUM_1568BPUM_1569BPUM_1570BPUM_1571BPUM_1574
BPSE320373 BURPS668_1741BURPS668_1742BURPS668_0968BURPS668_1284
BPSE320372 BURPS1710B_A2075BURPS1710B_A2076BURPS1710B_A1182BURPS1710B_A1511
BPSE272560 BPSL1917BPSL1916BPSL0907BPSL1206
BPET94624 BPET3132BPET3131BPET2813BPET1609
BPER257313 BP1248BP1249BP1754BP0794BP2497
BPAR257311 BPP1863BPP1864BPP1985BPP3432BPP3483
BOVI236 GBOORF2157GBOORFA0197GBOORF2158GBOORFA0204
BMEL359391 BAB1_2167BAB2_0193BAB1_2168BAB1_0509
BMEL224914 BMEI1963BMEII1044BMEI1962BMEII1037
BMAL320389 BMA10247_0992BMA10247_0993BMA10247_2111BMA10247_0407
BMAL320388 BMASAVP1_A1506BMASAVP1_A1505BMASAVP1_A2657BMASAVP1_A1124
BMAL243160 BMA_1060BMA_1059BMA_2241BMA_1835
BLIC279010 BL01221BL01222BL01220BL01219BL01215
BJAP224911 BLL0781BLR7480BSL0780BLL1795
BHEN283166 BH02130BH13220BH02110BH04470
BHAL272558 BH2411BH2410BH2409BH2408BH2405
BCLA66692 ABC2226ABC2225ABC2224ABC2223ABC2220
BCIC186490 BCI_0630BCI_0629BCI_0555BCI_0628
BCER572264 BCA_3907BCA_3906BCA_3905BCA_3904BCA_3901
BCER405917 BCE_3849BCE_3848BCE_3847BCE_3846BCE_3843
BCER315749 BCER98_2463BCER98_2462BCER98_2461BCER98_2460BCER98_2457
BCER288681 BCE33L3570BCE33L3569BCE33L3568BCE33L3567BCE33L3564
BCER226900 BC_3809BC_3807BC_3806BC_3803
BCEN331272 BCEN2424_1501BCEN2424_1502BCEN2424_2511BCEN2424_2254
BCEN331271 BCEN_1021BCEN_1022BCEN_1900BCEN_1642
BCAN483179 BCAN_A2209BCAN_B0199BCAN_A2210BCAN_B0207
BBRO257310 BB3245BB3244BB2173BB3882BB3932
BBAC264462 BD1548BD1549BD1507BD1550BD3869
BAPH198804 BUSG364BUSG363BUSG143BUSG362
BANT592021 BAA_3972BAA_3971BAA_3970BAA_3967
BANT568206 BAMEG_0683BAMEG_0684BAMEG_0685BAMEG_0686BAMEG_0689
BANT261594 GBAA3948GBAA3947GBAA3946GBAA3945GBAA3942
BANT260799 BAS3662BAS3661BAS3660BAS3659BAS3656
BAMY326423 RBAM_016490RBAM_016500RBAM_016510RBAM_016520RBAM_016550
BAMB398577 BAMMC406_1423BAMMC406_1424BAMMC406_2429BAMMC406_2171
BAMB339670 BAMB_1383BAMB_1384BAMB_2558BAMB_2292
BABO262698 BRUAB1_2140BRUAB2_0196BRUAB1_2141BRUAB2_0203
ASP76114 EBA5842EBA5843EBA4449EBA5844EBA1394
ASP62977 ACIAD0370ACIAD3307ACIAD0023ACIAD0401
ASP62928 AZO2106AZO2105AZO1206AZO2104AZO0765
ASP232721 AJS_2560AJS_2559AJS_3398AJS_0952AJS_3519
ASP1667 ARTH_1417ARTH_1424ARTH_1430ARTH_1435
ASAL382245 ASA_1011ASA_1012ASA_0683ASA_1013ASA_1875
APLE434271 APJL_0631APJL_0632APJL_0046APJL_1023APJL_1926
APLE416269 APL_0640APL_0641APL_0045APL_1005APL_1883
AORE350688 CLOS_1529CLOS_1531CLOS_1532CLOS_1533CLOS_1536
AMET293826 AMET_2672AMET_2670AMET_2668AMET_2665
AMAR329726 AM1_3081AM1_3004AM1_2652AM1_0599
AHYD196024 AHA_3302AHA_3301AHA_0681AHA_3300AHA_1997
AEHR187272 MLG_1947MLG_1946MLG_0851MLG_1945MLG_2658
ADEH290397 ADEH_1104ADEH_1105ADEH_1106ADEH_0576
ACRY349163 ACRY_0226ACRY_0441ACRY_0583ACRY_0442ACRY_1786
ACAU438753 AZC_0022AZC_0098AZC_0064AZC_4242
ABOR393595 ABO_0330ABO_0331ABO_0458ABO_0332ABO_2565
ABAU360910 BAV2393BAV2392BAV1412BAV2668
AAVE397945 AAVE_3382AAVE_3381AAVE_3449AAVE_1258AAVE_3872
AAUR290340 AAUR_1562AAUR_1565AAUR_1568AAUR_1569AAUR_1571


Organism features enriched in list (features available for 315 out of the 337 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0076696417
Arrangment:Pairs 0.000755175112
Endospores:No 1.857e-2061211
Endospores:Yes 1.812e-115053
GC_Content_Range4:0-40 1.971e-1373213
GC_Content_Range4:40-60 0.0001084142224
GC_Content_Range4:60-100 0.0000115100145
GC_Content_Range7:0-30 0.00204751647
GC_Content_Range7:30-40 9.352e-1057166
GC_Content_Range7:50-60 6.865e-780107
GC_Content_Range7:60-70 0.000039292134
Genome_Size_Range5:0-2 5.602e-3322155
Genome_Size_Range5:4-6 5.135e-24154184
Genome_Size_Range5:6-10 0.00368843447
Genome_Size_Range9:0-1 0.0001027527
Genome_Size_Range9:1-2 3.227e-2717128
Genome_Size_Range9:2-3 0.002568952120
Genome_Size_Range9:3-4 0.00187575377
Genome_Size_Range9:4-5 4.549e-97796
Genome_Size_Range9:5-6 5.179e-137788
Gram_Stain:Gram_Neg 7.917e-13222333
Gram_Stain:Gram_Pos 0.003546168150
Habitat:Host-associated 0.000074190206
Habitat:Multiple 0.0000287118178
Habitat:Specialized 0.00104621853
Habitat:Terrestrial 0.00029302631
Motility:No 1.058e-852151
Motility:Yes 3.847e-10181267
Optimal_temp.:- 0.0040653153257
Optimal_temp.:25-30 0.00011031819
Optimal_temp.:35-37 0.00029781313
Oxygen_Req:Aerobic 0.0030610114185
Oxygen_Req:Anaerobic 0.000380240102
Oxygen_Req:Facultative 0.0029261123201
Pathogenic_in:Plant 0.00689811315
Shape:Coccobacillus 0.00105581111
Shape:Coccus 5.450e-82282
Shape:Irregular_coccus 0.0002907217
Shape:Rod 2.471e-19240347
Shape:Sphere 0.0005129319
Shape:Spiral 0.0000358734
Temp._range:Hyperthermophilic 4.173e-6223
Temp._range:Mesophilic 0.0007901270473
Temp._range:Psychrophilic 0.003720899



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 125
Effective number of orgs (counting one per cluster within 468 clusters): 110

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17400
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.1
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM21
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
ECAN269484 ncbi Ehrlichia canis Jake1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
BXEN266265 ncbi Burkholderia xenovorans LB4000
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181


Names of the homologs of the genes in the group in each of these orgs
  EG11178   EG11177   EG11079   EG10914   EG10786   
WSUC273121
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496 TW0167
TWHI203267 TW581
TVOL273116
TPEN368408
TPAL243276 TP_0890
TKOD69014
TDEN326298 TMDEN_1225
TDEN243275 TDE_1105
TACI273075
STOK273063
SSP387093 SUN_0810
SSOL273057
SMAR399550
SACI330779
RTYP257363
RRIC452659
RRIC392021
RPRO272947 RP219
RMAS416276
RFEL315456
RCON272944
RCAN293613 A1E_01250
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PSP117 RB5503
PMAR93060 P9215_01301
PMAR74546 PMT9312_0115
PMAR59920 PMN2A_1480
PMAR167555 NATL1_01851
PMAR167546 P9301ORF_0130
PMAR167542 P9515ORF_0127
PMAR167540 PMM0112
PMAR167539 PRO_0132
PMAR146891 A9601_01301
PISL384616
PINT246198 PIN_A0443
PHOR70601
PGIN242619 PG_0957
PFUR186497
PAST100379 PAM151
PARS340102
PAER178306 PAE0368
PABY272844
OTSU357244
NSP387092 NIS_1124
NSEN222891 NSE_0175
NPHA348780
NFAR247156 NFA38900
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311 MFL282
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LINT363253 LI0936
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HBUT415426
HACI382638
FNOD381764 FNOD_1031
ECAN269484 ECAJ_0849
CSUL444179
CMET456442
CMAQ397948
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK1137
CHOM360107
CFET360106
CCUR360105 CCV52592_1139
CCON360104 CCC13826_0119
BXEN266265
BGAR290434 BG0828
BBUR224326 BB_0802
BAFZ390236 BAPKO_0855
AYEL322098 AYWB_569
AURANTIMONAS
APER272557
ALAI441768
AFUL224325
ABUT367737 ABU_0875


Organism features enriched in list (features available for 118 out of the 125 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.00002218112
Arrangment:Singles 0.001194072286
Disease:Rocky_Mountain_Spotted_Fever 0.008123833
Disease:periodontal_disease 0.008123833
Endospores:No 1.675e-971211
Endospores:Yes 0.0000496153
GC_Content_Range4:0-40 5.886e-1174213
GC_Content_Range4:40-60 0.004573434224
GC_Content_Range4:60-100 4.538e-710145
GC_Content_Range7:0-30 0.00001222247
GC_Content_Range7:30-40 0.000021152166
GC_Content_Range7:50-60 0.001398311107
GC_Content_Range7:60-70 1.078e-69134
Genome_Size_Range5:0-2 3.116e-3184155
Genome_Size_Range5:2-4 0.002848228197
Genome_Size_Range5:4-6 6.751e-174184
Genome_Size_Range5:6-10 0.0012440247
Genome_Size_Range9:0-1 7.034e-71727
Genome_Size_Range9:1-2 1.867e-2167128
Genome_Size_Range9:3-4 0.0000713477
Genome_Size_Range9:4-5 1.727e-7396
Genome_Size_Range9:5-6 9.520e-9188
Genome_Size_Range9:6-8 0.0014072138
Gram_Stain:Gram_Pos 1.575e-124150
Habitat:Aquatic 0.00165212991
Habitat:Multiple 2.683e-813178
Habitat:Specialized 0.00003452353
Habitat:Terrestrial 0.0061454131
Optimal_temp.:100 0.008123833
Optimal_temp.:35-40 0.008123833
Optimal_temp.:85 0.001610844
Oxygen_Req:Aerobic 0.005834027185
Oxygen_Req:Anaerobic 5.038e-638102
Oxygen_Req:Facultative 0.000037023201
Oxygen_Req:Microaerophilic 0.00001601218
Pathogenic_in:Animal 0.0060177666
Salinity:Extreme_halophilic 0.004308657
Shape:Irregular_coccus 1.692e-91517
Shape:Pleomorphic 0.001127068
Shape:Rod 3.150e-1730347
Shape:Sphere 1.797e-91619
Shape:Spiral 4.486e-82134
Temp._range:Hyperthermophilic 1.869e-81723
Temp._range:Mesophilic 5.292e-678473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462130.5267
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181930.5070
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951770.4968
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4223000.4942
PWY-5918 (heme biosynthesis I)2722230.4927
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862300.4867
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392570.4762
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002360.4752
PWY-4041 (γ-glutamyl cycle)2792240.4734
PWY-5386 (methylglyoxal degradation I)3052370.4640
ARO-PWY (chorismate biosynthesis I)5103310.4608
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251900.4580
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491410.4561
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652670.4549
PWY-5340 (sulfate activation for sulfonation)3852760.4491
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4583090.4471
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292470.4454
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912260.4428
PANTO-PWY (pantothenate biosynthesis I)4723130.4336
VALDEG-PWY (valine degradation I)2902240.4335
PROSYN-PWY (proline biosynthesis I)4753140.4318
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962270.4314
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002290.4301
TYRFUMCAT-PWY (tyrosine degradation I)1841600.4270
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081750.4268
PWY-5194 (siroheme biosynthesis)3122350.4267
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831590.4244
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162870.4238
PWY-1269 (CMP-KDO biosynthesis I)3252410.4204
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))5053240.4179
GLUTAMINDEG-PWY (glutamine degradation I)1911630.4169
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902210.4141
PWY-5913 (TCA cycle variation IV)3012270.4137
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552010.4131
THISYN-PWY (thiamin biosynthesis I)5023220.4108
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911620.4100
PWY-5148 (acyl-CoA hydrolysis)2271840.4097
P163-PWY (lysine fermentation to acetate and butyrate)3672610.4090
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262390.4041
PWY-6164 (3-dehydroquinate biosynthesis I)5163260.4004



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11177   EG11079   EG10914   EG10786   
EG111780.9999850.9993130.9998880.998687
EG111770.9993490.9999610.998559
EG110790.9993450.99904
EG109140.999104
EG10786



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PAIRWISE BLAST SCORES:

  EG11178   EG11177   EG11079   EG10914   EG10786   
EG111780.0f0----
EG11177-0.0f0---
EG11079--0.0f0--
EG10914---0.0f0-
EG10786----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10914 EG11177 EG11178 (centered at EG11177)
EG11079 (centered at EG11079)
EG10786 (centered at EG10786)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11178   EG11177   EG11079   EG10914   EG10786   
409/623418/623411/623417/623319/623
AAEO224324:0:Tyes-3960-795
AAUR290340:2:Tyes03679
AAVE397945:0:Tyes20912090215702568
ABAC204669:0:Tyes-643-4310
ABAU360910:0:Tyes98698501257-
ABOR393595:0:Tyes0113522275
ABUT367737:0:Tyes----0
ACAU438753:0:Tyes-076424275
ACEL351607:0:Tyes6--20
ACRY349163:8:Tyes02163572171561
ADEH290397:0:Tyes531532-5330
AEHR187272:0:Tyes10841083010821793
AFER243159:0:Tyes-1600159-
AHYD196024:0:Tyes25552554025531289
AMAR234826:0:Tyes-0404-402
AMAR329726:9:Tyes245623792033-0
AMET293826:0:Tyes75-30
ANAE240017:0:Tyes8-10-
AORE350688:0:Tyes02347
APHA212042:0:Tyes-0368-366
APLE416269:0:Tyes60260309671888
APLE434271:0:Tno56356409491904
ASAL382245:5:Tyes31831903201149
ASP1667:3:Tyes0713-18
ASP232721:2:Tyes15511550236202477
ASP62928:0:Tyes1378137745713760
ASP62977:0:Tyes32730580354-
ASP76114:2:Tyes26062607179126080
AVAR240292:3:Tyes02325--1645
AYEL322098:4:Tyes0----
BABO262698:0:Tno--0-7
BABO262698:1:Tno-0-1-
BAFZ390236:2:Fyes0----
BAMB339670:3:Tno011209939-
BAMB398577:3:Tno011025764-
BAMY326423:0:Tyes01236
BANT260799:0:Tno65430
BANT261594:2:Tno5-430
BANT568206:2:Tyes01236
BANT592021:2:Tno543-0
BAPH198804:0:Tyes2142130212-
BAPH372461:0:Tyes10---
BBAC264462:0:Tyes42430442197
BBAC360095:0:Tyes-83084-
BBRO257310:0:Tyes10671066017161766
BBUR224326:21:Fno0----
BCAN483179:0:Tno--0-8
BCAN483179:1:Tno-0-1-
BCEN331271:2:Tno01889629-
BCEN331272:3:Tyes011008752-
BCER226900:1:Tyes6-430
BCER288681:0:Tno65430
BCER315749:1:Tyes65430
BCER405917:1:Tyes65430
BCER572264:1:Tno65430
BCIC186490:0:Tyes7170069-
BCLA66692:0:Tyes65430
BFRA272559:1:Tyes--3153-0
BFRA295405:0:Tno--3386-0
BGAR290434:2:Fyes0----
BHAL272558:0:Tyes65430
BHEN283166:0:Tyes-210210224
BHER314723:0:Fyes0--2-
BJAP224911:0:Fyes-1674301027
BLIC279010:0:Tyes01236
BLON206672:0:Tyes73--0-
BMAL243160:1:Tno101042680-
BMAL320388:1:Tno37237114930-
BMAL320389:1:Tyes57157216610-
BMEL224914:0:Tno--7-0
BMEL224914:1:Tno-1-0-
BMEL359391:0:Tno--0--
BMEL359391:1:Tno-1523-15240
BOVI236:0:Tyes--0-7
BOVI236:1:Tyes-0-1-
BPAR257311:0:Tno0111814871538
BPER257313:0:Tyes42142286801543
BPET94624:0:Tyes1538153712120-
BPSE272560:1:Tyes100810070299-
BPSE320372:1:Tno8808810327-
BPSE320373:1:Tno7477480308-
BPUM315750:0:Tyes01236
BQUI283165:0:Tyes-27430144
BSP107806:2:Tyes2192180217-
BSP36773:2:Tyes011227963-
BSP376:0:Tyes-0571015714
BSUB:0:Tyes01236
BSUI204722:0:Tyes--0--
BSUI204722:1:Tyes-1629-16300
BSUI470137:0:Tno--0-7
BSUI470137:1:Tno-0-1-
BTHA271848:1:Tno175517540283-
BTHE226186:0:Tyes--0-1809
BTHU281309:1:Tno65430
BTHU412694:1:Tno65430
BTRI382640:1:Tyes-212880385
BTUR314724:0:Fyes280--2820
BVIE269482:7:Tyes011109863-
BWEI315730:4:Tyes65430
CABO218497:0:Tyes-0--325
CACE272562:1:Tyes02-4603
CAULO:0:Tyes-167302646
CBEI290402:0:Tyes02-41175
CBLO203907:0:Tyes01122-
CBLO291272:0:Tno01122-
CBOT36826:1:Tno64320
CBOT441770:0:Tyes64320
CBOT441771:0:Tno2167--02164
CBOT441772:1:Tno64320
CBOT498213:1:Tno64320
CBOT508765:1:Tyes02-46
CBOT515621:2:Tyes64320
CBOT536232:0:Tno64320
CBUR227377:1:Tyes98898704431452
CBUR360115:1:Tno1025102405581520
CBUR434922:2:Tno33333413976670
CCAV227941:1:Tyes-0--345
CCHL340177:0:Tyes2-0--
CCON360104:2:Tyes----0
CCUR360105:0:Tyes----0
CDES477974:0:Tyes023-9
CDIF272563:1:Tyes034610
CDIP257309:0:Tyes83-0-
CEFF196164:0:Fyes610--
CFEL264202:1:Tyes-356--0
CGLU196627:0:Tyes8-20-
CHUT269798:0:Tyes--0-2201
CHYD246194:0:Tyes594-5915890
CJAP155077:0:Tyes01271722665
CJEI306537:0:Tyes-0---
CKLU431943:1:Tyes02-46
CMIC31964:2:Tyes638-63107
CMIC443906:2:Tyes110-10360
CMUR243161:1:Tyes-178--0
CNOV386415:0:Tyes4210-
CPEL335992:0:Tyes231-0--
CPER195102:1:Tyes4210248
CPER195103:0:Tno4210235
CPER289380:3:Tyes4210232
CPHY357809:0:Tyes6430-
CPNE115711:1:Tyes-0--457
CPNE115713:0:Tno-0--651
CPNE138677:0:Tno-0--658
CPNE182082:0:Tno-0--686
CPRO264201:0:Fyes10---
CPSY167879:0:Tyes1006100701008937
CRUT413404:0:Tyes40410263711
CSAL290398:0:Tyes26402639026382587
CSP501479:6:Fyes-51-0-
CSP501479:8:Fyes--0-401
CSP78:2:Tyes-0405113735
CTEP194439:0:Tyes0-2--
CTET212717:0:Tyes02--971
CTRA471472:0:Tyes-172--0
CTRA471473:0:Tno-172--0
CVES412965:0:Tyes42430253-
CVIO243365:0:Tyes0121602-
DARO159087:0:Tyes216010-
DDES207559:0:Tyes--3410-
DETH243164:0:Tyes3613600-792
DGEO319795:1:Tyes--0-167
DHAF138119:0:Tyes108760
DNOD246195:0:Tyes10-983-
DOLE96561:0:Tyes8108080807-
DPSY177439:2:Tyes1562156001559-
DRAD243230:3:Tyes--0-577
DRED349161:0:Tyes86540
DSHI398580:5:Tyes-2718260226700
DSP216389:0:Tyes3113100-683
DSP255470:0:Tno3253240-700
DVUL882:1:Tyes--053975
ECAN269484:0:Tyes----0
ECAR218491:0:Tyes0132083282
ECHA205920:0:Tyes--4-0
ECOL199310:0:Tno38043803038023304
ECOL316407:0:Tno31353134031332796
ECOL331111:6:Tno34773476034752982
ECOL362663:0:Tno32263225032242803
ECOL364106:1:Tno35633562035613188
ECOL405955:2:Tyes32163215032142823
ECOL409438:6:Tyes34923491034903114
ECOL413997:0:Tno30213020030192656
ECOL439855:4:Tno33343333033322862
ECOL469008:0:Tno0130082331
ECOL481805:0:Tno0131092359
ECOL585034:0:Tno32603259032582877
ECOL585035:0:Tno34133412034112992
ECOL585055:0:Tno35293528035273052
ECOL585056:2:Tno36353634036333146
ECOL585057:0:Tno36533652036513234
ECOL585397:0:Tno36953694036933166
ECOL83334:0:Tno41114110041093737
ECOLI:0:Tno32063205032042856
ECOO157:0:Tno41244123041223748
EFAE226185:3:Tyes019-1686-
EFER585054:1:Tyes31113110031092714
ELIT314225:0:Tyes-020351-
ERUM254945:0:Tyes--5-0
ERUM302409:0:Tno--5-0
ESP42895:1:Tyes30473046030452710
FALN326424:0:Tyes4210273
FJOH376686:0:Tyes--0-752
FMAG334413:1:Tyes4--0-
FNOD381764:0:Tyes-0---
FNUC190304:0:Tyes-785-01179
FPHI484022:1:Tyes74210161710-
FRANT:0:Tno01409812605-
FSP106370:0:Tyes4210242
FSP1855:0:Tyes2582602612620
FSUC59374:0:Tyes1562---0
FTUL351581:0:Tno12191130972-
FTUL393011:0:Tno10931080874-
FTUL393115:0:Tyes01382803596-
FTUL401614:0:Tyes120810120166-
FTUL418136:0:Tno02089651185-
FTUL458234:0:Tno11341140908-
GBET391165:0:Tyes-1886018851787
GFOR411154:0:Tyes0-170-250
GKAU235909:1:Tyes01236
GMET269799:1:Tyes2022040205207
GOXY290633:5:Tyes332-0334616
GSUL243231:0:Tyes1031050106108
GTHE420246:1:Tyes01236
GURA351605:0:Tyes027873-
GVIO251221:0:Tyes3860-0-2395
HARS204773:0:Tyes1502150109391950
HAUR316274:2:Tyes2342360--
HCHE349521:0:Tyes01452923619
HDUC233412:0:Tyes111711167513520
HHAL349124:0:Tyes21940-
HINF281310:0:Tyes6086070451-
HINF374930:0:Tyes01512142-
HINF71421:0:Tno3123130493-
HMOD498761:0:Tyes023610
HNEP81032:0:Tyes0-7223274-
HSOM205914:1:Tyes6376380293-
HSOM228400:0:Tno125412550737-
ILOI283942:0:Tyes2117301411
JSP290400:1:Tyes-6810677692
JSP375286:0:Tyes1689168806422337
KPNE272620:2:Tyes33533416653330
KRAD266940:2:Fyes22-3-0
LACI272621:0:Tyes10---
LBIF355278:2:Tyes0-147124
LBIF456481:2:Tno0-153024
LBOR355276:1:Tyes--32520
LBOR355277:1:Tno--0273275
LBRE387344:2:Tyes10-55-
LCAS321967:1:Tyes310--
LCHO395495:0:Tyes4714720259-
LDEL321956:0:Tyes10---
LDEL390333:0:Tyes10---
LGAS324831:0:Tyes01-334-
LHEL405566:0:Tyes210--
LINN272626:1:Tno0123-
LINT189518:1:Tyes--252502
LINT267671:1:Tno--019371935
LINT363253:3:Tyes----0
LJOH257314:0:Tyes428427-0-
LLAC272622:5:Tyes0--1192-
LLAC272623:0:Tyes0--1118-
LMES203120:1:Tyes0--227-
LMON169963:0:Tno0123-
LMON265669:0:Tyes0123-
LPLA220668:0:Tyes70-81-
LPNE272624:0:Tno18291828018271731
LPNE297245:1:Fno17211720017191626
LPNE297246:1:Fyes18291828018271730
LPNE400673:0:Tno25352534184725330
LREU557436:0:Tyes5354-0-
LSAK314315:0:Tyes50---
LSPH444177:1:Tyes0123-
LWEL386043:0:Tyes0123-
LXYL281090:0:Tyes-02143775
MABS561007:1:Tyes-810-
MAER449447:0:Tyes0---1112
MAQU351348:2:Tyes24612460024591627
MAVI243243:0:Tyes-73-0
MBOV233413:0:Tno-70--
MBOV410289:0:Tno-70--
MCAP243233:0:Tyes11751174206911710
MEXT419610:0:Tyes22912290036141922
MFLA265072:0:Tyes0121372663
MFLO265311:0:Tyes-0---
MGIL350054:3:Tyes-410-
MLEP272631:0:Tyes-452013
MLOT266835:2:Tyes01218831618
MMAG342108:0:Tyes3238328303284-
MMAR394221:0:Tyes-242402425-
MPET420662:1:Tyes51851716400-
MSME246196:0:Tyes-0458
MSP164756:1:Tno-034-
MSP164757:0:Tno-034-
MSP189918:2:Tyes-034-
MSP266779:3:Tyes-352403526332
MSP400668:0:Tyes01326521874
MSP409:2:Tyes-374026021872
MSUC221988:0:Tyes76676510910-
MTBCDC:0:Tno-70--
MTBRV:0:Tno-70--
MTHE264732:0:Tyes02348
MTUB336982:0:Tno-70--
MTUB419947:0:Tyes-70--
MVAN350058:0:Tyes-01920-
MXAN246197:0:Tyes01359522860
NARO279238:0:Tyes--7960-
NEUR228410:0:Tyes60060199101264
NEUT335283:2:Tyes208207070890
NFAR247156:2:Tyes--0--
NGON242231:0:Tyes5405380115-
NHAM323097:2:Tyes-0301113015
NMEN122586:0:Tno73673711770-
NMEN122587:0:Tyes8858870178-
NMEN272831:0:Tno8208210153-
NMEN374833:0:Tno8838840162-
NMUL323848:3:Tyes10783686867
NOCE323261:1:Tyes1851841011830
NSEN222891:0:Tyes----0
NSP103690:6:Tyes01486--2707
NSP35761:1:Tyes13121120
NSP387092:0:Tyes---0-
NWIN323098:0:Tyes-0254612550
OANT439375:4:Tyes--0-8
OANT439375:5:Tyes-1-0-
OCAR504832:0:Tyes-1272602732
OIHE221109:0:Tyes01-36
PACN267747:0:Tyes15-0--
PAER178306:0:Tyes----0
PAER208963:0:Tyes19681967177319660
PAER208964:0:Tno28112810262328090
PARC259536:0:Tyes0117033865
PAST100379:0:Tyes0----
PATL342610:0:Tyes30311538330
PCAR338963:0:Tyes0260135
PCRY335284:1:Tyes01196041402
PDIS435591:0:Tyes--26-0
PENT384676:0:Tyes36536640443670
PFLU205922:0:Tyes01412624436
PFLU216595:1:Tyes43214320043194659
PFLU220664:0:Tyes01440424740
PGIN242619:0:Tyes--0--
PHAL326442:0:Tyes----0
PHAL326442:1:Tyes8182083-
PING357804:0:Tyes01229862502
PINT246198:1:Tyes--0--
PLUM243265:0:Fyes400140000399941
PLUT319225:0:Tyes1471-1469-0
PMAR146891:0:Tyes0----
PMAR167539:0:Tyes0----
PMAR167540:0:Tyes0----
PMAR167542:0:Tyes0----
PMAR167546:0:Tyes0----
PMAR167555:0:Tyes0----
PMAR59920:0:Tno0----
PMAR74546:0:Tyes0----
PMAR74547:0:Tyes1628-0--
PMAR93060:0:Tyes0----
PMEN399739:0:Tyes26902689026881002
PMOB403833:0:Tyes1106---0
PMUL272843:1:Tyes45645513600503
PNAP365044:8:Tyes59859718210-
PPEN278197:0:Tyes01---
PPRO298386:2:Tyes2324025373
PPUT160488:0:Tno4315431421743130
PPUT351746:0:Tyes4204420324642020
PPUT76869:0:Tno4358435725243560
PRUM264731:0:Tyes--318-0
PSP117:0:Tyes0----
PSP296591:2:Tyes011410838-
PSP312153:0:Tyes1741736880878
PSP56811:2:Tyes0147351636
PSTU379731:0:Tyes23292328023271008
PSYR205918:0:Tyes34803479034783977
PSYR223283:2:Tyes3931393029139290
PTHE370438:0:Tyes02348
RALB246199:0:Tyes-02--
RCAN293613:0:Fyes----0
RCAS383372:0:Tyes410-18
RDEN375451:4:Tyes-4269901412
RETL347834:5:Tyes-27140861
REUT264198:3:Tyes1068106718070-
REUT381666:2:Tyes1886188526056710
RFER338969:1:Tyes702703055-
RLEG216596:6:Tyes-27810955
RMET266264:2:Tyes1741174025896390
RPAL258594:0:Tyes-1396903964
RPAL316055:0:Tyes-1120901216
RPAL316056:0:Tyes-09141907
RPAL316057:0:Tyes-1384803843
RPAL316058:0:Tyes-0360513598
RPOM246200:1:Tyes-752847550
RPRO272947:0:Tyes----0
RRUB269796:1:Tyes-81708187
RSAL288705:0:Tyes--0-5
RSOL267608:1:Tyes924925211617220
RSP101510:3:Fyes--01-
RSP357808:0:Tyes034--
RSPH272943:4:Tyes-1862018651852
RSPH349101:2:Tno-1807018101797
RSPH349102:5:Tyes-7220719-
RXYL266117:0:Tyes--01-
SACI56780:0:Tyes1910190801907-
SAGA205921:0:Tno1697827810-
SAGA208435:0:Tno1797767750-
SAGA211110:0:Tyes2418508490-
SALA317655:1:Tyes--1841043
SARE391037:0:Tyes078911
SAUR158878:1:Tno01-3-
SAUR158879:1:Tno01-3-
SAUR196620:0:Tno01-3-
SAUR273036:0:Tno01-3-
SAUR282458:0:Tno01-3-
SAUR282459:0:Tno01-3-
SAUR359786:1:Tno01-3-
SAUR359787:1:Tno01-3-
SAUR367830:3:Tno01-3-
SAUR418127:0:Tyes01-3-
SAUR426430:0:Tno01-3-
SAUR93061:0:Fno01-3-
SAUR93062:1:Tno01-3-
SAVE227882:1:Fyes131-1281060
SBAL399599:3:Tyes23222321023201734
SBAL402882:1:Tno22092208022071681
SBOY300268:1:Tyes30123013030142532
SCO:2:Fyes0-32830
SDEG203122:0:Tyes1401390138-
SDEN318161:0:Tyes0117733542
SDYS300267:1:Tyes31103109031082824
SELO269084:0:Tyes132-0-1112
SENT209261:0:Tno30113010030092723
SENT220341:0:Tno30653064030632782
SENT295319:0:Tno29852984029832701
SENT321314:2:Tno32413240032392945
SENT454169:2:Tno34053404034033044
SEPI176279:1:Tyes0123-
SEPI176280:0:Tno0123-
SERY405948:0:Tyes9430-
SFLE198214:0:Tyes30693068030672708
SFLE373384:0:Tno30123011030102731
SFUM335543:0:Tyes0219333-
SGLO343509:3:Tyes013621634
SGOR29390:0:Tyes213699-0-
SHAE279808:0:Tyes4210-
SHAL458817:0:Tyes20812080020791603
SHIGELLA:0:Tno29992998029972650
SLAC55218:1:Fyes-1128178911250
SLOI323850:0:Tyes17891788017871378
SMED366394:3:Tyes-299302995-
SMEL266834:2:Tyes-05642-
SMUT210007:0:Tyes265925-0-
SONE211586:1:Tyes01228621846
SPEA398579:0:Tno20692068020671601
SPNE1313:0:Tyes0584-959-
SPNE170187:0:Tyes0587-1034-
SPNE171101:0:Tno0614-992-
SPNE487213:0:Tno0396-916-
SPNE487214:0:Tno0642-1041-
SPNE488221:0:Tno0601-990-
SPRO399741:1:Tyes0120923375
SPYO160490:0:Tno0--190-
SPYO186103:0:Tno0--245-
SPYO193567:0:Tno0--1330-
SPYO198466:0:Tno0--187-
SPYO286636:0:Tno0--226-
SPYO293653:0:Tno0--263-
SPYO319701:0:Tyes0--208-
SPYO370551:0:Tno0--262-
SPYO370552:0:Tno4620-672-
SPYO370553:0:Tno0--260-
SPYO370554:0:Tyes0--244-
SRUB309807:1:Tyes1-0--
SSAP342451:2:Tyes3210-
SSED425104:0:Tyes2283228202281461
SSON300269:1:Tyes31263125031242808
SSP1131:0:Tyes1434-0--
SSP1148:0:Tyes106420200-1230
SSP292414:2:Tyes-320230-
SSP321327:0:Tyes05291553-1332
SSP321332:0:Tyes019671957-520
SSP387093:0:Tyes----0
SSP644076:6:Fyes-5-0-
SSP64471:0:Tyes1741-0--
SSP84588:0:Tyes170201069--
SSP94122:1:Tyes0121692461
SSUI391295:0:Tyes0--89-
SSUI391296:0:Tyes0--94-
STHE264199:0:Tyes186776-0-
STHE292459:0:Tyes02359
STHE299768:0:Tno180805-0-
STHE322159:2:Tyes156681-0-
STRO369723:0:Tyes0-7810
STYP99287:1:Tyes32173216032152927
SWOL335541:0:Tyes0234-
TCRU317025:0:Tyes6426430646-
TDEN243275:0:Tyes0----
TDEN292415:0:Tyes33133015133290
TDEN326298:0:Tyes----0
TELO197221:0:Tyes1604-1531-0
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