CANDIDATE ID: 594

CANDIDATE ID: 594

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9917250e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    6.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6644 (puuA) (b1297)
   Products of gene:
     - G6644-MONOMER (glutamate-putrescine ligase)
     - CPLX0-7709 (glutamate-putrescine ligase)
       Reactions:
        putrescine + L-glutamate + ATP  ->  gamma-glutamyl-L-putrescine + ADP + phosphate + 2 H+
         In pathways
         ORNARGDEG-PWY (superpathway of arginine and ornithine degradation)
         ARGDEG-PWY (superpathway of arginine, putrescine, and 4-aminobutyrate degradation)
         ORNDEG-PWY (superpathway of ornithine degradation)
         PWY0-1221 (putrescine degradation II)

- EG11822 (puuB) (b1301)
   Products of gene:
     - EG11822-MONOMER (γ-glutamylputrescine oxidase)
       Reactions:
        gamma-glutamyl-L-putrescine + H2O + oxygen  ->  gamma-glutamyl-gamma-aminobutyraldehyde + hydrogen peroxide + ammonium
         In pathways
         ORNARGDEG-PWY (superpathway of arginine and ornithine degradation)
         ARGDEG-PWY (superpathway of arginine, putrescine, and 4-aminobutyrate degradation)
         ORNDEG-PWY (superpathway of ornithine degradation)
         PWY0-1221 (putrescine degradation II)

- EG11632 (potI) (b0857)
   Products of gene:
     - POTI-MONOMER (PotI)
     - ABC-25-CPLX (putrescine ABC transporter)
       Reactions:
        ATP + putrescine[periplasmic space] + H2O  ->  ADP + phosphate + putrescine[cytosol]

- EG11630 (potG) (b0855)
   Products of gene:
     - POTG-MONOMER (PotG)
     - ABC-25-CPLX (putrescine ABC transporter)
       Reactions:
        ATP + putrescine[periplasmic space] + H2O  ->  ADP + phosphate + putrescine[cytosol]

- EG10751 (potC) (b1124)
   Products of gene:
     - POTC-MONOMER (PotC)
     - ABC-24-CPLX (putrescine/spermidine ABC transporter)
       Reactions:
        ATP + putrescine[periplasmic space] + H2O  ->  ADP + phosphate + putrescine[cytosol]
        ATP + spermidine[periplasmic space] + H2O  ->  ADP + phosphate + spermidine[cytosol]



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 167
Effective number of orgs (counting one per cluster within 468 clusters): 115

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
TTHE300852 ncbi Thermus thermophilus HB84
TTHE262724 ncbi Thermus thermophilus HB274
TROS309801 ncbi Thermomicrobium roseum DSM 51595
TFUS269800 ncbi Thermobifida fusca YX4
TERY203124 ncbi Trichodesmium erythraeum IMS1014
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B5
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)5
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46805
SALA317655 ncbi Sphingopyxis alaskensis RB22565
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSP357808 ncbi Roseiflexus sp. RS-14
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1184
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
RCAS383372 ncbi Roseiflexus castenholzii DSM 139414
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp5
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NSP35761 Nocardioides sp.4
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-15
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MSP189918 ncbi Mycobacterium sp. KMS5
MSP164757 ncbi Mycobacterium sp. JLS5
MSP164756 ncbi Mycobacterium sp. MCS5
MSME246196 ncbi Mycobacterium smegmatis MC2 1555
MPET420662 ncbi Methylibium petroleiphilum PM15
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP290400 ncbi Jannaschia sp. CCS14
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B14
FALN326424 ncbi Frankia alni ACN14a4
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSP78 Caulobacter sp.5
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CAULO ncbi Caulobacter crescentus CB155
BXEN266265 ncbi Burkholderia xenovorans LB4005
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.5
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
AHYD196024 Aeromonas hydrophila dhakensis5
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACEL351607 ncbi Acidothermus cellulolyticus 11B5
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715


Names of the homologs of the genes in the group in each of these orgs
  G6644   EG11822   EG11632   EG11630   EG10751   
XORY360094 XOOORF_1920XOOORF_1919XOOORF_1930XOOORF_1928XOOORF_1930
XORY342109 XOO2625XOO2626XOO2616XOO2618XOO2616
XORY291331 XOO2785XOO2786XOO2775XOO2777XOO2775
XCAM487884 XCC-B100_1824XCC-B100_1823XCC-B100_1835XCC-B100_1833XCC-B100_1835
XCAM316273 XCAORF_2626XCAORF_2627XCAORF_2613XCAORF_2615XCAORF_2613
XCAM314565 XC_1768XC_1767XC_1778XC_1776XC_1778
XCAM190485 XCC2348XCC2349XCC2338XCC2340XCC2338
XAXO190486 XAC2480XAC2481XAC2470XAC2472XAC2470
XAUT78245 XAUT_2336XAUT_1940XAUT_2943XAUT_2941XAUT_2943
VPAR223926 VP1781VP1775VP1527VP1529VP1527
VEIS391735 VEIS_0825VEIS_0826VEIS_0821VEIS_0823VEIS_4754
TTHE300852 TTHA1329TTHA1238TTHA1240TTHA1238
TTHE262724 TT_C0965TT_C0874TT_C0876TT_C0874
TROS309801 TRD_A0430TRD_A0892TRD_0521TRD_0523TRD_0521
TFUS269800 TFU_0284TFU_0283TFU_0280TFU_0283
TERY203124 TERY_4681TERY_2802TERY_2805TERY_2802
STYP99287 STM3128STM0880STM0878STM1223
STHE292459 STH2651STH469STH471STH469
SSP94122 SHEWANA3_3098SHEWANA3_3093SHEWANA3_3094SHEWANA3_3096SHEWANA3_3094
SSP644076 SCH4B_1930SCH4B_1927SCH4B_3309SCH4B_3311SCH4B_3309
SSP321332 CYB_1005CYB_0927CYB_2209CYB_2079CYB_2209
SSP292414 TM1040_1836TM1040_1839TM1040_2981TM1040_2983TM1040_2981
SSON300269 SSO_1843SSO_1839SSO_0842SSO_0840SSO_1142
SSED425104 SSED_1060SSED_1065SSED_1064SSED_1062SSED_1064
SPRO399741 SPRO_3216SPRO_2064SPRO_1648SPRO_1646SPRO_1648
SPEA398579 SPEA_0945SPEA_0950SPEA_0949SPEA_0947SPEA_0949
SONE211586 SO_1268SO_1274SO_1273SO_1271SO_1273
SMEL266834 SMC01973SMC01972SMC00773SMC00771SMC00773
SMED366394 SMED_2416SMED_2415SMED_0313SMED_0311SMED_0313
SLOI323850 SHEW_0972SHEW_0977SHEW_0976SHEW_0974SHEW_0976
SLAC55218 SL1157_2316SL1157_2313SL1157_1405SL1157_1403SL1157_1405
SHIGELLA S1384ORDLPOTIPOTGPOTC
SHAL458817 SHAL_0995SHAL_1000SHAL_0999SHAL_0997SHAL_0999
SFLE373384 SFV_1311SFV_1315SFV_0842SFV_1144SFV_1142
SFLE198214 AAN42913.1AAN42917.1AAN42444.1AAN42442.1AAN42744.1
SENT454169 SEHA_C3371SEHA_C1014SEHA_C1012SEHA_C1338
SENT321314 SCH_3068SCH_0873SCH_0871SCH_1173
SENT295319 SPA2996SPA1882SPA1884SPA1627
SENT220341 STY3297STY0913STY0911STY1263
SENT209261 T3050T2016T2018T1697
SDYS300267 SDY_1947SDY_1943SDY_0738SDY_0740SDY_2028
SDEN318161 SDEN_3032SDEN_0908SDEN_3028SDEN_3030SDEN_3028
SCO SCO1613SCO5671SCO5668SCO5670
SBOY300268 SBO_1765SBO_1761SBO_0791SBO_0789SBO_1939
SBAL402882 SHEW185_1165SHEW185_1170SHEW185_1169SHEW185_1167SHEW185_1169
SBAL399599 SBAL195_1198SBAL195_1203SBAL195_1202SBAL195_1200SBAL195_1202
SAVE227882 SAV6725SAV3959SAV1735SAV2590SAV2588
SALA317655 SALA_1118SALA_1120SALA_1115SALA_1114SALA_1115
RXYL266117 RXYL_1031RXYL_0903RXYL_2915RXYL_2912RXYL_2915
RSPH349102 RSPH17025_3049RSPH17025_0863RSPH17025_1379RSPH17025_2170
RSPH349101 RSPH17029_0219RSPH17029_2032RSPH17029_1061RSPH17029_3768
RSPH272943 RSP_1568RSP_0378RSP_2398RSP_3041
RSP357808 ROSERS_1047ROSERS_1644ROSERS_1641ROSERS_1644
RRUB269796 RRU_A1253RRU_A1019RRU_A1015RRU_A1017RRU_A1015
RPOM246200 SPO_1302SPO_A0209SPO_3466SPO_3468SPO_3466
RPAL316058 RPB_1135RPB_1037RPB_1456RPB_1454RPB_1456
RPAL316057 RPD_1148RPD_1432RPD_1430RPD_1432
RPAL316056 RPC_1479RPC_3952RPC_3954RPC_3952
RPAL258594 RPA1401RPA2638RPA4158RPA4160RPA4158
RLEG216596 RL1466RL0754RL0766RL0764RL0766
RFER338969 RFER_0350RFER_0347RFER_0355RFER_0353
RETL347834 RHE_CH01315RHE_CH00705RHE_CH00717RHE_CH00715RHE_CH00717
RDEN375451 RD1_1894RD1_1891RD1_0167RD1_0169RD1_0167
RCAS383372 RCAS_3479RCAS_2838RCAS_2840RCAS_2838
PSYR223283 PSPTO_5310PSPTO_2694PSPTO_5301PSPTO_5303PSPTO_5301
PSYR205918 PSYR_4868PSYR_2427PSYR_4861PSYR_4863PSYR_4861
PSTU379731 PST_0063PST_2371PST_0071PST_0069PST_0071
PPUT76869 PPUTGB1_5347PPUTGB1_3524PPUTGB1_5237PPUTGB1_5239PPUTGB1_5237
PPUT351746 PPUT_5091PPUT_3245PPUT_5084PPUT_5086PPUT_5084
PPUT160488 PP_5299PP_2448PP_5177PP_5179PP_5177
PPRO298386 PBPRB0862PBPRA1854PBPRA1852PBPRA1854
PNAP365044 PNAP_2864PNAP_1031PNAP_2859PNAP_2861
PMUL272843 PM1383PM0262PM0264PM0262
PMEN399739 PMEN_0341PMEN_1975PMEN_0349PMEN_0347PMEN_0349
PFLU220664 PFL_2341PFL_2343PFL_2337PFL_5924PFL_2337
PFLU216595 PFLU5849PFLU4179PFLU5841PFLU5843PFLU5841
PFLU205922 PFL_2122PFL_2124PFL_5401PFL_2120PFL_3144
PENT384676 PSEEN5299PSEEN2164PSEEN5291PSEEN5293PSEEN5291
PCRY335284 PCRYO_0897PCRYO_0237PCRYO_0239PCRYO_0237
PAER208964 PA0296PA2776PA0304PA0302PA3609
PAER208963 PA14_03860PA14_28180PA14_03960PA14_03940PA14_17620
OANT439375 OANT_3936OANT_3937OANT_3925OANT_3927OANT_3925
NSP35761 NOCA_2587NOCA_0622NOCA_3217NOCA_3226
NMEN374833 NMCC_0560NMCC_0559NMCC_0557NMCC_0559
NMEN272831 NMC0556NMC0555NMC0553NMC0555
NMEN122587 NMA0819NMA0818NMA0816NMA0818
NMEN122586 NMB_0614NMB_0612NMB_0610NMB_0612
NGON242231 NGO0197NGO0196NGO0192NGO0196
MVAN350058 MVAN_1603MVAN_3170MVAN_3390MVAN_3387MVAN_3390
MSUC221988 MS2290MS0810MS0812MS0810
MSP409 M446_5527M446_6381M446_6379M446_6381
MSP400668 MMWYL1_3524MMWYL1_3526MMWYL1_3520MMWYL1_3522MMWYL1_3520
MSP266779 MESO_0161MESO_0160MESO_0166MESO_0164MESO_0166
MSP189918 MKMS_0523MKMS_2905MKMS_2609MKMS_2612MKMS_2609
MSP164757 MJLS_0501MJLS_2891MJLS_2603MJLS_2606MJLS_2603
MSP164756 MMCS_0512MMCS_2861MMCS_2564MMCS_2567MMCS_2564
MSME246196 MSMEG_3827MSMEG_3663MSMEG_3277MSMEG_0662MSMEG_3277
MPET420662 MPE_A1901MPE_A1899MPE_A1906MPE_A1904MPE_A1906
MLOT266835 MLL5148MLL4186MLR6537MLR6534MLR6537
MGIL350054 MFLV_4065MFLV_3135MFLV_3138MFLV_3135
LPNE400673 LPC_1721LPC_0603LPC_0605LPC_0603
LPNE297245 LPL2178LPL1146LPL1148LPL1146
LPNE272624 LPG2252LPG1139LPG1141LPG1139
LCHO395495 LCHO_1739LCHO_1741LCHO_1733LCHO_1735LCHO_1733
KPNE272620 GKPORF_B5460GKPORF_B5455GKPORF_B5326GKPORF_B5324GKPORF_B0047
JSP290400 JANN_1127JANN_1124JANN_3073JANN_2400
HMOD498761 HM1_2353HM1_2278HM1_2276HM1_2278
HINF71421 HI_0499HI_1345HI_1347HI_1345
HINF374930 CGSHIEE_00495CGSHIEE_04250CGSHIEE_04260CGSHIEE_04250
HINF281310 NTHI0627NTHI1822NTHI1820NTHI1822
HCHE349521 HCH_06321HCH_02207HCH_02209HCH_02207
HAUR316274 HAUR_4032HAUR_1063HAUR_1061HAUR_1063
FNOD381764 FNOD_0261FNOD_0372FNOD_0370FNOD_0372
FALN326424 FRAAL6426FRAAL6835FRAAL6832FRAAL6835
ECOO157 Z2491ORDLPOTIPOTGPOTC
ECOL83334 ECS1874ECS1878ECS0937ECS0935ECS1500
ECOL585057 ECIAI39_1648ECIAI39_1652ECIAI39_0837ECIAI39_0835ECIAI39_2036
ECOL585056 ECUMN_1603ECUMN_1607ECUMN_1047ECUMN_1045ECUMN_1302
ECOL585055 EC55989_1459EC55989_1463EC55989_0902EC55989_0900EC55989_1236
ECOL585034 ECIAI1_1322ECIAI1_1326ECIAI1_0896ECIAI1_0894ECIAI1_1161
ECOL481805 ECOLC_2328ECOLC_2324ECOLC_2739ECOLC_2741ECOLC_2479
ECOL469008 ECBD_2320ECBD_2316ECBD_2737ECBD_2739ECBD_2475
ECOL439855 ECSMS35_1825ECSMS35_1821ECSMS35_0885ECSMS35_0883ECSMS35_2002
ECOL413997 ECB_01274ECB_01278ECB_00862ECB_00860ECB_01122
ECOL409438 ECSE_1349ECSE_1353ECSE_0915ECSE_0913ECSE_1190
ECOL331111 ECE24377A_1506ECE24377A_1511ECE24377A_0929ECE24377A_0927ECE24377A_1247
ECOL316407 ECK1292:JW5201:B1297ECK1296:JW1294:B1301ECK0848:JW0841:B0857ECK0846:JW5818:B0855ECK1110:JW1110:B1124
DSHI398580 DSHI_2226DSHI_2227DSHI_1598DSHI_1597
CVIO243365 CV_2024CV_1334CV_1959CV_1333CV_4100
CSP78 CAUL_3952CAUL_3943CAUL_3949CAUL_3948CAUL_3949
CSP501479 CSE45_3819CSE45_3822CSE45_3247CSE45_3246CSE45_3247
CSAL290398 CSAL_1181CSAL_1198CSAL_1194CSAL_1194
CPSY167879 CPS_4677CPS_4676CPS_4674CPS_4672CPS_4674
CBEI290402 CBEI_4206CBEI_4938CBEI_4940CBEI_4938
CAULO CC3138CC3129CC3135CC3134CC3135
BXEN266265 BXE_B0942BXE_B0935BXE_B0937BXE_B0939BXE_B0937
BWEI315730 BCERKBAB4_3469BCERKBAB4_3177BCERKBAB4_1203BCERKBAB4_1203
BVIE269482 BCEP1808_5375BCEP1808_3088BCEP1808_3085BCEP1808_3083BCEP1808_3085
BTHA271848 BTH_I1828BTH_II1954BTH_II1951BTH_I2277BTH_I2279
BSUI470137 BSUIS_B0760BSUIS_B0762BSUIS_A1665BSUIS_A1667BSUIS_A1665
BSUI204722 BR_A0768BR_A0770BR_1609BR_1611BR_1609
BSP376 BRADO3961BRADO1217BRADO1215BRADO1217
BSP36773 BCEP18194_B0804BCEP18194_C7678BCEP18194_B2811BCEP18194_A6346BCEP18194_C7680
BPSE320373 BURPS668_2654BURPS668_A0720BURPS668_A0723BURPS668_A0725BURPS668_0130
BPSE320372 BURPS1710B_A3021BURPS1710B_B2363BURPS1710B_B2366BURPS1710B_B2368BURPS1710B_A2504
BPSE272560 BPSL2336BPSS0461BPSS0464BPSS0466BPSL1558
BPET94624 BPET3491BPET1951BPET1949BPET1951
BPER257313 BP0820BP2345BP2347BP2345
BPAR257311 BPP3410BPP1694BPP1692BPP1694
BMEL359391 BAB2_0471BAB2_0469BAB1_1624BAB1_1627BAB1_1624
BMEL224914 BMEII0523BMEII0521BMEI0414BMEI0412BMEI0414
BMAL320389 BMA10247_1669BMA10247_A1637BMA10247_1055BMA10247_1057BMA10247_1055
BMAL320388 BMASAVP1_A2355BMASAVP1_0572BMASAVP1_A1785BMASAVP1_A1787BMASAVP1_A1785
BMAL243160 BMA_0656BMA_A0774BMA_1298BMA_1300BMA_1298
BJAP224911 BLR2084BLL6826BLL7103BLL7105BLL7103
BCEN331272 BCEN2424_4901BCEN2424_3002BCEN2424_2999BCEN2424_2997BCEN2424_2999
BCEN331271 BCEN_3465BCEN_3463BCEN_2385BCEN_2383BCEN_2385
BCAN483179 BCAN_B0777BCAN_B0779BCAN_A1646BCAN_A1648BCAN_A1646
BBRO257310 BB3860BB3414BB3416BB3414
BAMB398577 BAMMC406_4806BAMMC406_2911BAMMC406_1669BAMMC406_2906BAMMC406_2908
BAMB339670 BAMB_4278BAMB_6070BAMB_3046BAMB_3044BAMB_3046
BABO262698 BRUAB2_0464BRUAB2_0462BRUAB1_1596BRUAB1_1598BRUAB1_1596
ASAL382245 ASA_0172ASA_3018ASA_0178ASA_0176ASA_0178
AHYD196024 AHA_4140AHA_2999AHA_4134AHA_4136AHA_4134
ACRY349163 ACRY_0546ACRY_0537ACRY_0540ACRY_0542
ACEL351607 ACEL_1096ACEL_1280ACEL_1281ACEL_1284ACEL_1281
ACAU438753 AZC_3648AZC_4441AZC_3517AZC_3519AZC_3517


Organism features enriched in list (features available for 155 out of the 167 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00228641492
Arrangment:Pairs 0.005323540112
Disease:Brucellosis 0.001266255
Disease:Dysentery 0.000328666
Disease:Meningitis_and_septicemia 0.004855044
Endospores:No 2.812e-829211
Endospores:Yes 0.0030038653
GC_Content_Range4:0-40 5.362e-2211213
GC_Content_Range4:60-100 1.406e-1982145
GC_Content_Range7:0-30 4.576e-6147
GC_Content_Range7:30-40 8.543e-1510166
GC_Content_Range7:40-50 0.000013614117
GC_Content_Range7:50-60 2.884e-648107
GC_Content_Range7:60-70 1.780e-1978134
Genome_Size_Range5:0-2 2.737e-194155
Genome_Size_Range5:2-4 2.537e-630197
Genome_Size_Range5:4-6 2.049e-1386184
Genome_Size_Range5:6-10 8.392e-133547
Genome_Size_Range9:1-2 1.011e-144128
Genome_Size_Range9:2-3 5.383e-712120
Genome_Size_Range9:4-5 0.00179593796
Genome_Size_Range9:5-6 1.877e-104988
Genome_Size_Range9:6-8 3.611e-123038
Gram_Stain:Gram_Neg 7.425e-15128333
Gram_Stain:Gram_Pos 9.419e-915150
Motility:No 1.218e-619151
Motility:Yes 2.834e-695267
Optimal_temp.:25-30 1.739e-61519
Optimal_temp.:35-37 0.0012275913
Oxygen_Req:Aerobic 0.000075068185
Oxygen_Req:Anaerobic 8.771e-123102
Shape:Coccus 0.0001427982
Shape:Rod 7.394e-11125347
Shape:Spiral 0.0002529134



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 293
Effective number of orgs (counting one per cluster within 468 clusters): 246

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TTUR377629 ncbi Teredinibacter turnerae T79010
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP1755 Thermoanaerobacter sp.1
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-91
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P21
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SELO269084 ncbi Synechococcus elongatus PCC 63010
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSOL267608 ncbi Ralstonia solanacearum GMI10001
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H161
REUT264198 ncbi Ralstonia eutropha JMP1341
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO11
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT31
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NFAR247156 ncbi Nocardia farcinica IFM 101521
MXAN246197 ncbi Myxococcus xanthus DK 16221
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI31
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-11
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus1
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BSUB ncbi Bacillus subtilis subtilis 1681
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH1
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi1
BCIC186490 Candidatus Baumannia cicadellinicola0
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH721
ASP232721 ncbi Acidovorax sp. JS420
ASP1667 Arthrobacter sp.1
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
AAVE397945 ncbi Acidovorax citrulli AAC00-11
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G6644   EG11822   EG11632   EG11630   EG10751   
ZMOB264203
XFAS405440
XFAS183190
XFAS160492
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116 TVN1492
TTUR377629
TTEN273068
TSP1755 TETH514_2178
TPSE340099 TETH39_1496
TLET416591 TLET_0896
TKOD69014
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025
TACI273075 TA1498
SWOL335541 SWOL_1007
STRO369723
STOK273063 ST0156
STHE322159 STER_1494
SSP84588
SSP64471
SSP387093
SSP1148
SSP1131
SSOL273057 SSO2554
SRUB309807
SPYO370554 MGAS10750_SPY0979
SPYO370553 MGAS2096_SPY0902
SPYO370552 MGAS10270_SPY0944
SPYO370551 MGAS9429_SPY0947
SPYO319701 M28_SPY0805
SPYO293653 M5005_SPY0828
SPYO286636 M6_SPY0826
SPYO198466 SPYM3_0766
SPYO193567 SPS0966
SPYO186103 SPYM18_1066
SPYO160490 SPY1104
SPNE488221 SP70585_1425
SPNE487214 SPH_1517
SPNE487213 SPT_0888
SPNE171101 SPR1244
SPNE170187 SPN05133
SPNE1313 SPJ_1286
SMUT210007 SMU_975
SMAR399550
SFUM335543 SFUM_3496
SERY405948 SACE_5355
SELO269084
SARE391037
SAGA208435 SAG_1109
SAGA205921 SAK_1194
SACI56780
SACI330779 SACI_2141
RTYP257363
RSOL267608 RSC3407
RSAL288705 RSAL33209_0601
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
REUT381666 H16_B1893
REUT264198 REUT_C6270
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_2298
PSP312153
PSP117
PRUM264731
PPEN278197 PEPE_0739
PMOB403833 PMOB_1793
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PLUM243265 PLU4287
PISL384616
PINT246198
PING357804
PHOR70601 PH0359
PHAL326442
PGIN242619
PFUR186497
PCAR338963
PATL342610
PAST100379 PAM661
PARS340102
PARC259536
PAER178306
PACN267747 PPA0664
PABY272844 PAB1292
OTSU357244
NSP387092
NSEN222891
NPHA348780 NP3648A
NOCE323261
NFAR247156 NFA21040
MXAN246197 MXAN_5630
MTUB419947 MRA_2885
MTUB336982 TBFG_12876
MTHE349307
MTHE264732
MTHE187420
MTBRV RV2860C
MTBCDC MT2928
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192 MK0338
MJAN243232 MJ_1346
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311 MFL509
MFLA265072
MCAP340047
MBUR259564
MBOV410289 BCG_2882C
MBOV233413 MB2885C
MBAR269797
MAVI243243 MAV_3718
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007 MAB_2651C
LXYL281090 LXX10010
LSPH444177
LINT267671
LINT189518
LHEL405566 LHV_1558
LDEL390333 LDB1472
LDEL321956 LBUL_1368
LBOR355277
LBOR355276
LBIF456481 LEPBI_I2652
LBIF355278 LBF_2571
LACI272621 LBA1501
KRAD266940 KRAD_1637
ILOI283942 IL0483
IHOS453591
HWAL362976 HQ1431A
HSP64091 VNG2093G
HSAL478009 OE3922R
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMAR272569
HHEP235279
HHAL349124
HBUT415426
HACI382638
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154
GBET391165
FSUC59374
FSP106370 FRANCCI3_4059
FJOH376686
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DSP255470
DSP216389
DRED349161 DRED_2807
DPSY177439
DOLE96561
DNOD246195
DGEO319795
DETH243164
DARO159087
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CRUT413404
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992 SAR11_1171
CMUR243161
CMIC443906 CMM_1634
CMIC31964 CMS1617
CMET456442
CMAQ397948 CMAQ_1766
CKOR374847 KCR_0976
CKLU431943 CKL_2775
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077 CJA_3752
CHYD246194 CHY_0704
CHUT269798 CHU_2502
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDES477974 DAUD_2030
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CABO218497
BSUB BSU17460
BSP107806
BLON206672
BHER314723 BH0640
BHAL272558 BH2360
BGAR290434 BG0663
BCIC186490
BAPH372461
BAPH198804
BAMY326423 RBAM_017260
AURANTIMONAS
ASP76114
ASP62977
ASP62928 AZO0217
ASP232721
ASP1667 ARTH_1592
APHA212042
APER272557
ANAE240017
AMET293826
AMAR329726
AMAR234826
ALAI441768 ACL_0473
AFUL224325
AFER243159
AEHR187272
ADEH290397
ABUT367737
ABOR393595
AAVE397945 AAVE_2186
AAUR290340 AAUR_PTC20213
AAEO224324


Organism features enriched in list (features available for 275 out of the 293 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0018809217
Arrangment:Pairs 1.757e-1122112
Disease:Pharyngitis 0.002320888
Disease:Wide_range_of_infections 0.00023101111
Disease:bronchitis_and_pneumonitis 0.002320888
Endospores:No 4.880e-11137211
Endospores:Yes 0.00168361553
GC_Content_Range4:0-40 0.0000713122213
GC_Content_Range4:60-100 0.000015047145
GC_Content_Range7:30-40 0.001925493166
GC_Content_Range7:40-50 0.006796366117
GC_Content_Range7:50-60 0.004133039107
GC_Content_Range7:60-70 1.830e-640134
Genome_Size_Range5:0-2 1.755e-22124155
Genome_Size_Range5:4-6 1.093e-1740184
Genome_Size_Range5:6-10 1.185e-6747
Genome_Size_Range9:0-1 4.058e-72527
Genome_Size_Range9:1-2 3.168e-1599128
Genome_Size_Range9:2-3 0.001896770120
Genome_Size_Range9:4-5 6.365e-62696
Genome_Size_Range9:5-6 2.748e-111488
Genome_Size_Range9:6-8 7.001e-7438
Gram_Stain:Gram_Neg 0.0000194133333
Habitat:Aquatic 0.00004436091
Habitat:Multiple 4.627e-757178
Habitat:Specialized 0.00028073753
Motility:No 0.000015493151
Motility:Yes 1.262e-698267
Optimal_temp.:25-30 0.0006327219
Optimal_temp.:25-35 0.0089836214
Optimal_temp.:30-35 0.004988077
Oxygen_Req:Anaerobic 0.000017467102
Oxygen_Req:Facultative 7.765e-865201
Oxygen_Req:Microaerophilic 0.00587581418
Pathogenic_in:Animal 0.00061781966
Pathogenic_in:Human 0.000429682213
Pathogenic_in:No 0.0013890123226
Salinity:Extreme_halophilic 0.004988077
Shape:Irregular_coccus 2.165e-61717
Shape:Rod 5.358e-15118347
Shape:Sphere 0.00010941719
Shape:Spiral 0.00001302834
Temp._range:Hyperthermophilic 0.00005882023
Temp._range:Mesophilic 0.0009743209473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491020.5272
GALACTCAT-PWY (D-galactonate degradation)104810.5162
PWY-4041 (γ-glutamyl cycle)2791440.5044
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951160.4980
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121190.4755
TYRFUMCAT-PWY (tyrosine degradation I)1841090.4740
P344-PWY (acrylonitrile degradation)2101170.4654
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135890.4645
PWY-5028 (histidine degradation II)130860.4562
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138890.4538
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491280.4532
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491280.4532
PWY-5148 (acyl-CoA hydrolysis)2271210.4529
GLYCOCAT-PWY (glycogen degradation I)2461270.4526
PWY-2361 (3-oxoadipate degradation)82640.4504
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291500.4487
GLYSYN-THR-PWY (glycine biosynthesis IV)2151150.4373
PWY-6185 (4-methylcatechol degradation (ortho cleavage))107740.4354
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391480.4157
CATECHOL-ORTHO-CLEAVAGE-PWY (catechol degradation to β-ketoadipate)103700.4135
PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY (protocatechuate degradation II (ortho-cleavage pathway))2471220.4133
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251150.4126
GLUCONSUPER-PWY (D-gluconate degradation)2291160.4105
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911340.4067
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961350.4039



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11822   EG11632   EG11630   EG10751   
G66440.9993430.9988310.998950.998626
EG118220.9987220.9987010.9988
EG116320.9999120.999966
EG116300.999874
EG10751



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PAIRWISE BLAST SCORES:

  G6644   EG11822   EG11632   EG11630   EG10751   
G66440.0f0----
EG11822-0.0f0---
EG11632--0.0f0-1.5e-38
EG11630---0.0f0-
EG10751--3.2e-45-0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-25-CPLX (putrescine ABC transporter) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.400, average score: 1.000)
  Genes in pathway or complex:
             0.9992 0.9976 EG11629 (potF) POTF-MONOMER (PotF)
   *in cand* 0.9995 0.9987 EG11632 (potI) POTI-MONOMER (PotI)
             0.9994 0.9982 EG11631 (potH) POTH-MONOMER (PotH)
   *in cand* 0.9995 0.9987 EG11630 (potG) POTG-MONOMER (PotG)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG10751 (potC) POTC-MONOMER (PotC)
   *in cand* 0.9991 0.9987 EG11822 (puuB) EG11822-MONOMER (γ-glutamylputrescine oxidase)
   *in cand* 0.9991 0.9986 G6644 (puuA) G6644-MONOMER (glutamate-putrescine ligase)

- ARGDEG-PWY (superpathway of arginine, putrescine, and 4-aminobutyrate degradation) (degree of match pw to cand: 0.167, degree of match cand to pw: 0.400, average score: 0.840)
  Genes in pathway or complex:
   *in cand* 0.9991 0.9986 G6644 (puuA) G6644-MONOMER (glutamate-putrescine ligase)
   *in cand* 0.9991 0.9987 EG11822 (puuB) EG11822-MONOMER (γ-glutamylputrescine oxidase)
             0.9978 0.9973 EG10036 (puuC) ALDHDEHYDROG-MONOMER (γ-glutamyl-γ-aminobutyraldehyde dehydrogenase)
             0.9977 0.9957 G6645 (puuD) G6645-MONOMER (γ-glutamyl-γ-aminobutyrate hydrolase)
             0.7611 0.5315 EG10960 (speB) AGMATIN-MONOMER (SpeB)
             0.3142 0.0683 EG11501 (adiA) ARGDECARBOXDEG-MONOMER (Adi)
             0.9888 0.9851 EG10361 (gabT) GABATRANSAM-MONOMER (4-aminobutyrate aminotransferase monomer)
             0.9820 0.9715 EG11329 (gabD) SUCCSEMIALDDEHYDROG-MONOMER (GabD)
             0.9903 0.9875 G6646 (puuE) G6646-MONOMER (4-aminobutyrate aminotransferase)
             0.9673 0.9266 G6811 (sad) G6811-MONOMER (Sad)
             0.6555 0.4978 G7596 (ygjG) G7596-MONOMER (putrescine aminotransferase / diamine transaminase)
             0.9248 0.8047 G6755 (ydcW) G6755-MONOMER (γ-aminobutyraldehyde dehydrogenase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG10751 (potC) POTC-MONOMER (PotC)
   *in cand* 0.9995 0.9987 EG11630 (potG) POTG-MONOMER (PotG)
   *in cand* 0.9995 0.9987 EG11632 (potI) POTI-MONOMER (PotI)

- ORNARGDEG-PWY (superpathway of arginine and ornithine degradation) (degree of match pw to cand: 0.154, degree of match cand to pw: 0.400, average score: 0.807)
  Genes in pathway or complex:
             0.9673 0.9266 G6811 (sad) G6811-MONOMER (Sad)
             0.9903 0.9875 G6646 (puuE) G6646-MONOMER (4-aminobutyrate aminotransferase)
             0.9820 0.9715 EG11329 (gabD) SUCCSEMIALDDEHYDROG-MONOMER (GabD)
             0.9888 0.9851 EG10361 (gabT) GABATRANSAM-MONOMER (4-aminobutyrate aminotransferase monomer)
             0.3142 0.0683 EG11501 (adiA) ARGDECARBOXDEG-MONOMER (Adi)
             0.7611 0.5315 EG10960 (speB) AGMATIN-MONOMER (SpeB)
             0.9977 0.9957 G6645 (puuD) G6645-MONOMER (γ-glutamyl-γ-aminobutyrate hydrolase)
             0.9978 0.9973 EG10036 (puuC) ALDHDEHYDROG-MONOMER (γ-glutamyl-γ-aminobutyraldehyde dehydrogenase)
   *in cand* 0.9991 0.9987 EG11822 (puuB) EG11822-MONOMER (γ-glutamylputrescine oxidase)
   *in cand* 0.9991 0.9986 G6644 (puuA) G6644-MONOMER (glutamate-putrescine ligase)
             0.9248 0.8047 G6755 (ydcW) G6755-MONOMER (γ-aminobutyraldehyde dehydrogenase)
             0.6555 0.4978 G7596 (ygjG) G7596-MONOMER (putrescine aminotransferase / diamine transaminase)
             0.4189 0.1390 EG10964 (speF) ORNDECARBOXDEG-MONOMER (SpeF)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG10751 (potC) POTC-MONOMER (PotC)
   *in cand* 0.9995 0.9987 EG11630 (potG) POTG-MONOMER (PotG)
   *in cand* 0.9995 0.9987 EG11632 (potI) POTI-MONOMER (PotI)

- PWY0-1221 (putrescine degradation II) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.400, average score: 0.999)
  Genes in pathway or complex:
             0.9977 0.9957 G6645 (puuD) G6645-MONOMER (γ-glutamyl-γ-aminobutyrate hydrolase)
             0.9978 0.9973 EG10036 (puuC) ALDHDEHYDROG-MONOMER (γ-glutamyl-γ-aminobutyraldehyde dehydrogenase)
   *in cand* 0.9991 0.9987 EG11822 (puuB) EG11822-MONOMER (γ-glutamylputrescine oxidase)
   *in cand* 0.9991 0.9986 G6644 (puuA) G6644-MONOMER (glutamate-putrescine ligase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG10751 (potC) POTC-MONOMER (PotC)
   *in cand* 0.9995 0.9987 EG11630 (potG) POTG-MONOMER (PotG)
   *in cand* 0.9995 0.9987 EG11632 (potI) POTI-MONOMER (PotI)

- ORNDEG-PWY (superpathway of ornithine degradation) (degree of match pw to cand: 0.286, degree of match cand to pw: 0.400, average score: 0.762)
  Genes in pathway or complex:
             0.4189 0.1390 EG10964 (speF) ORNDECARBOXDEG-MONOMER (SpeF)
             0.6555 0.4978 G7596 (ygjG) G7596-MONOMER (putrescine aminotransferase / diamine transaminase)
             0.9248 0.8047 G6755 (ydcW) G6755-MONOMER (γ-aminobutyraldehyde dehydrogenase)
   *in cand* 0.9991 0.9986 G6644 (puuA) G6644-MONOMER (glutamate-putrescine ligase)
   *in cand* 0.9991 0.9987 EG11822 (puuB) EG11822-MONOMER (γ-glutamylputrescine oxidase)
             0.9978 0.9973 EG10036 (puuC) ALDHDEHYDROG-MONOMER (γ-glutamyl-γ-aminobutyraldehyde dehydrogenase)
             0.9977 0.9957 G6645 (puuD) G6645-MONOMER (γ-glutamyl-γ-aminobutyrate hydrolase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG10751 (potC) POTC-MONOMER (PotC)
   *in cand* 0.9995 0.9987 EG11630 (potG) POTG-MONOMER (PotG)
   *in cand* 0.9995 0.9987 EG11632 (potI) POTI-MONOMER (PotI)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11630 EG11632 (centered at EG11632)
EG10751 (centered at EG10751)
EG11822 (centered at EG11822)
G6644 (centered at G6644)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6644   EG11822   EG11632   EG11630   EG10751   
247/623172/623297/623252/623328/623
AAUR290340:0:Tyes0----
AAVE397945:0:Tyes-0---
ABAC204669:0:Tyes-15810--
ABAU360910:0:Tyes--020
ACAU438753:0:Tyes135947020
ACEL351607:0:Tyes0184185188185
ACRY349163:8:Tyes9035-
AHYD196024:0:Tyes10600105410561054
ALAI441768:0:Tyes--0--
AORE350688:0:Tyes--0-0
APLE416269:0:Tyes--202
APLE434271:0:Tno--202
ASAL382245:5:Tyes02739646
ASP1667:3:Tyes0----
ASP62928:0:Tyes-0---
AVAR240292:3:Tyes--276302763
AYEL322098:4:Tyes--0-0
BABO262698:0:Tno20---
BABO262698:1:Tno--010
BAFZ390236:2:Fyes--0-0
BAMB339670:1:Tno-0---
BAMB339670:2:Tno0----
BAMB339670:3:Tno--202
BAMB398577:2:Tno0----
BAMB398577:3:Tno-1257012521254
BAMY326423:0:Tyes0----
BANT260799:0:Tno2332-0-0
BANT261594:2:Tno2305-0-0
BANT568206:2:Tyes0-2475-2475
BANT592021:2:Tno2466-0-0
BBAC264462:0:Tyes--0-0
BBAC360095:0:Tyes01---
BBRO257310:0:Tyes-449020
BBUR224326:21:Fno--0-0
BCAN483179:0:Tno02---
BCAN483179:1:Tno--020
BCEN331271:1:Tno20---
BCEN331271:2:Tno--202
BCEN331272:2:Tyes0----
BCEN331272:3:Tyes-5202
BCER226900:1:Tyes--0-0
BCER288681:0:Tno2265-0-0
BCER315749:1:Tyes1284-0-0
BCER405917:1:Tyes2185-0-0
BCER572264:1:Tno2429-0-0
BCLA66692:0:Tyes0--1481-
BFRA272559:1:Tyes--0-0
BFRA295405:0:Tno--0-0
BGAR290434:2:Fyes--0--
BHAL272558:0:Tyes0----
BHEN283166:0:Tyes01---
BHER314723:0:Fyes--0--
BJAP224911:0:Fyes04771504850505048
BLIC279010:0:Tyes1558--0-
BMAL243160:0:Tno-0---
BMAL243160:1:Tno0-558560558
BMAL320388:0:Tno-0---
BMAL320388:1:Tno555-020
BMAL320389:0:Tyes-0---
BMAL320389:1:Tyes599-020
BMEL224914:0:Tno20---
BMEL224914:1:Tno--202
BMEL359391:0:Tno20---
BMEL359391:1:Tno--010
BOVI236:0:Tyes345347-0-
BPAR257311:0:Tno-1631202
BPER257313:0:Tyes-0137613781376
BPET94624:0:Tyes-1568202
BPSE272560:0:Tyes-035-
BPSE272560:1:Tyes773---0
BPSE320372:0:Tno-035-
BPSE320372:1:Tno426---0
BPSE320373:0:Tno-035-
BPSE320373:1:Tno2437---0
BPUM315750:0:Tyes1347--0-
BQUI283165:0:Tyes01---
BSP36773:0:Tyes-0--2
BSP36773:1:Tyes0-2007--
BSP36773:2:Tyes---0-
BSP376:0:Tyes-2607202
BSUB:0:Tyes0----
BSUI204722:0:Tyes02---
BSUI204722:1:Tyes--020
BSUI470137:0:Tno02---
BSUI470137:1:Tno--020
BTHA271848:0:Tno-30--
BTHA271848:1:Tno0--439441
BTHE226186:0:Tyes--0-0
BTHU281309:1:Tno2256-0-0
BTHU412694:1:Tno2066-0-0
BTRI382640:1:Tyes01---
BTUR314724:0:Fyes--0-0
BVIE269482:6:Tyes0----
BVIE269482:7:Tyes-5202
BWEI315730:4:Tyes219219030-0
BXEN266265:1:Tyes07535
CACE272562:1:Tyes--0-0
CAULO:0:Tyes90656
CBEI290402:0:Tyes0-728730728
CBOT36826:1:Tno--202
CBOT441770:0:Tyes--202
CBOT441771:0:Tno--202
CBOT441772:1:Tno--202
CBOT498213:1:Tno--202
CBOT508765:1:Tyes--020
CBOT515621:2:Tyes--202
CBOT536232:0:Tno--202
CDES477974:0:Tyes0----
CDIF272563:1:Tyes--0-0
CHUT269798:0:Tyes0----
CHYD246194:0:Tyes0----
CJAP155077:0:Tyes-0---
CKLU431943:1:Tyes---0-
CKOR374847:0:Tyes0----
CMAQ397948:0:Tyes0----
CMIC31964:2:Tyes0----
CMIC443906:2:Tyes0----
CNOV386415:0:Tyes--0-0
CPEL335992:0:Tyes-0---
CPER195102:1:Tyes--0-0
CPER195103:0:Tno--0-0
CPER289380:3:Tyes--0-0
CPHY357809:0:Tyes0-265-265
CPRO264201:0:Fyes--202
CPSY167879:0:Tyes54202
CSAL290398:0:Tyes01713-13
CSP501479:6:Fyes03---
CSP501479:7:Fyes--101
CSP78:2:Tyes90656
CVIO243365:0:Tyes709164402839
DDES207559:0:Tyes--202
DHAF138119:0:Tyes2901-0-0
DRAD243230:3:Tyes--202
DRED349161:0:Tyes0----
DSHI398580:5:Tyes64264310-
DVUL882:1:Tyes--020
ECAR218491:0:Tyes--2232250
ECOL199310:0:Tno--20390
ECOL316407:0:Tno45145520269
ECOL331111:6:Tno55656120309
ECOL362663:0:Tno--20246
ECOL364106:1:Tno--20394
ECOL405955:2:Tyes--20276
ECOL409438:6:Tyes44144520280
ECOL413997:0:Tno41241620264
ECOL439855:4:Tno920916201095
ECOL469008:0:Tno40421423157
ECOL481805:0:Tno40418420158
ECOL585034:0:Tno42643020266
ECOL585035:0:Tno--20252
ECOL585055:0:Tno56456820338
ECOL585056:2:Tno55956320261
ECOL585057:0:Tno824828201187
ECOL585397:0:Tno--10448
ECOL83334:0:Tno95495820575
ECOLI:0:Tno45646020270
ECOO157:0:Tno1291128720644
EFAE226185:3:Tyes--0-0
EFER585054:1:Tyes--20288
ESP42895:1:Tyes--20270
FALN326424:0:Tyes0-403400403
FMAG334413:1:Tyes--0-0
FNOD381764:0:Tyes0-114112114
FNUC190304:0:Tyes--202
FPHI484022:1:Tyes--202
FRANT:0:Tno--202
FSP106370:0:Tyes0----
FSP1855:0:Tyes634-02-
FTUL351581:0:Tno--020
FTUL393011:0:Tno--020
FTUL393115:0:Tyes--202
FTUL401614:0:Tyes--020
FTUL418136:0:Tno--202
FTUL458234:0:Tno--020
GKAU235909:1:Tyes603-0-0
GTHE420246:1:Tyes547---0
GVIO251221:0:Tyes--020
HARS204773:0:Tyes--020
HAUR316274:2:Tyes2985-202
HCHE349521:0:Tyes3975-020
HDUC233412:0:Tyes--202
HINF281310:0:Tyes-0106810661068
HINF374930:0:Tyes-0660662660
HINF71421:0:Tno-0827829827
HMOD498761:0:Tyes77-202
HSAL478009:4:Tyes0----
HSOM205914:1:Tyes--202
HSOM228400:0:Tno--202
HSP64091:2:Tno0----
HWAL362976:1:Tyes---0-
ILOI283942:0:Tyes-0---
JSP290400:1:Tyes3019761289-
JSP375286:0:Tyes--020
KPNE272620:2:Tyes53125308517651740
KRAD266940:2:Fyes0----
LACI272621:0:Tyes0----
LBIF355278:2:Tyes---0-
LBIF456481:2:Tno---0-
LBRE387344:2:Tyes--0-0
LCAS321967:1:Tyes0-549-549
LCHO395495:0:Tyes68020
LDEL321956:0:Tyes0----
LDEL390333:0:Tyes0----
LGAS324831:0:Tyes88---0
LHEL405566:0:Tyes0----
LINN272626:1:Tno--0-0
LINT363253:3:Tyes--202
LJOH257314:0:Tyes678---0
LLAC272622:5:Tyes1152---0
LLAC272623:0:Tyes1035---0
LMES203120:1:Tyes503-0-0
LMON169963:0:Tno--0-0
LMON265669:0:Tyes--0-0
LPLA220668:0:Tyes1090-0--
LPNE272624:0:Tno1111-020
LPNE297245:1:Fno1036-020
LPNE297246:1:Fyes1073-0-0
LPNE400673:0:Tno1092-020
LREU557436:0:Tyes0-448-448
LSAK314315:0:Tyes0---40
LWEL386043:0:Tyes--0-0
LXYL281090:0:Tyes0----
MABS561007:1:Tyes-0---
MAQU351348:2:Tyes--176917670
MAVI243243:0:Tyes0----
MBOV233413:0:Tno0----
MBOV410289:0:Tno0----
MCAP243233:0:Tyes--0-0
MEXT419610:0:Tyes--020
MFLO265311:0:Tyes--0--
MGIL350054:3:Tyes933-030
MJAN243232:2:Tyes0----
MKAN190192:0:Tyes0----
MLOT266835:2:Tyes7530192019181920
MMAG342108:0:Tyes--020
MPET420662:1:Tyes20757
MSME246196:0:Tyes31422984259902599
MSP164756:1:Tno02351205320562053
MSP164757:0:Tno02370208520882085
MSP189918:2:Tyes02372207920822079
MSP266779:3:Tyes10646
MSP400668:0:Tyes46020
MSP409:2:Tyes-0815813815
MSUC221988:0:Tyes-1520020
MTBCDC:0:Tno0----
MTBRV:0:Tno0----
MTUB336982:0:Tno0----
MTUB419947:0:Tyes0----
MVAN350058:0:Tyes01550177117681771
MXAN246197:0:Tyes0----
NARO279238:0:Tyes0347---
NEUR228410:0:Tyes--202
NEUT335283:2:Tyes--202
NFAR247156:2:Tyes0----
NGON242231:0:Tyes-3202
NHAM323097:2:Tyes--0-0
NMEN122586:0:Tno-4202
NMEN122587:0:Tyes-3202
NMEN272831:0:Tno-3202
NMEN374833:0:Tno-2101
NMUL323848:3:Tyes--020
NPHA348780:2:Tyes---0-
NSP103690:6:Tyes--03753-
NSP35761:1:Tyes19680-25982607
NWIN323098:0:Tyes--202
OANT439375:4:Tyes1112020
OCAR504832:0:Tyes--202
OIHE221109:0:Tyes--0-0
PABY272844:0:Tyes0----
PACN267747:0:Tyes0----
PAER208963:0:Tyes01964861102
PAER208964:0:Tno02505863354
PAST100379:0:Tyes----0
PCRY335284:1:Tyes-657020
PDIS435591:0:Tyes--0-0
PENT384676:0:Tyes29470294029422940
PFLU205922:0:Tyes24332001028
PFLU216595:1:Tyes16090160116031601
PFLU220664:0:Tyes46035300
PHOR70601:0:Tyes0----
PLUM243265:0:Fyes-0---
PMEN399739:0:Tyes01651868
PMOB403833:0:Tyes0----
PMUL272843:1:Tyes-1121020
PNAP365044:8:Tyes1842018371839-
PPEN278197:0:Tyes0----
PPRO298386:1:Tyes0----
PPRO298386:2:Tyes--202
PPUT160488:0:Tno28350271327152713
PPUT351746:0:Tyes18810187418761874
PPUT76869:0:Tno18400173017321730
PSP296591:2:Tyes-020282026-
PSP56811:2:Tyes--202
PSTU379731:0:Tyes02293868
PSYR205918:0:Tyes24580245124532451
PSYR223283:2:Tyes25780256925712569
PTHE370438:0:Tyes0----
RCAS383372:0:Tyes630-020
RDEN375451:4:Tyes16201617020
RETL347834:5:Tyes6030121012
REUT264198:1:Tyes-0---
REUT381666:1:Tyes-0---
RFER338969:1:Tyes3086-
RLEG216596:6:Tyes7100121012
RMET266264:1:Tyes--020
RPAL258594:0:Tyes01240277427762774
RPAL316055:0:Tyes--020
RPAL316056:0:Tyes-0247324752473
RPAL316057:0:Tyes-0284282284
RPAL316058:0:Tyes1010422420422
RPOM246200:0:Tyes-0---
RPOM246200:1:Tyes0-211921212119
RRUB269796:1:Tyes2384020
RSAL288705:0:Tyes0----
RSOL267608:1:Tyes-0---
RSP101510:3:Fyes30---
RSP357808:0:Tyes0-589586589
RSPH272943:3:Tyes---0-
RSPH272943:4:Tyes01872862--
RSPH349101:1:Tno---0-
RSPH349101:2:Tno01823846--
RSPH349102:5:Tyes216705101294-
RXYL266117:0:Tyes1340200420012004
SACI330779:0:Tyes0----
SAGA205921:0:Tno----0
SAGA208435:0:Tno----0
SAGA211110:0:Tyes623---0
SALA317655:1:Tyes46101
SAUR158878:1:Tno210---0
SAUR158879:1:Tno207---0
SAUR196620:0:Tno209---0
SAUR273036:0:Tno200---0
SAUR282458:0:Tno211---0
SAUR282459:0:Tno212---0
SAUR359786:1:Tno204---0
SAUR359787:1:Tno208---0
SAUR367830:3:Tno199---0
SAUR418127:0:Tyes207---0
SAUR426430:0:Tno251---0
SAUR93061:0:Fno222---0
SAUR93062:1:Tno214---0
SAVE227882:1:Fyes506322420860858
SBAL399599:3:Tyes05424
SBAL402882:1:Tno05424
SBOY300268:1:Tyes915912201083
SCO:2:Fyes04104-41014103
SDEG203122:0:Tyes--020
SDEN318161:0:Tyes21850218121832181
SDYS300267:1:Tyes11421140021220
SENT209261:0:Tno-12963093110
SENT220341:0:Tno-215420312
SENT295319:0:Tno-13202432450
SENT321314:2:Tno-223020305
SENT454169:2:Tno-227620321
SEPI176279:1:Tyes186---0
SEPI176280:0:Tno189---0
SERY405948:0:Tyes0----
SFLE198214:0:Tyes47547920305
SFLE373384:0:Tno4504540287285
SFUM335543:0:Tyes---0-
SGLO343509:3:Tyes--202
SGOR29390:0:Tyes0---575
SHAE279808:0:Tyes0-252-252
SHAL458817:0:Tyes05424
SHIGELLA:0:Tno48548920322
SLAC55218:1:Fyes898895202
SLOI323850:0:Tyes05424
SMED366394:3:Tyes20782077202
SMEL266834:2:Tyes18211820202
SMUT210007:0:Tyes----0
SONE211586:1:Tyes06535
SPEA398579:0:Tno05424
SPNE1313:0:Tyes----0
SPNE170187:0:Tyes----0
SPNE171101:0:Tno----0
SPNE487213:0:Tno----0
SPNE487214:0:Tno----0
SPNE488221:0:Tno----0
SPRO399741:1:Tyes1581424202
SPYO160490:0:Tno----0
SPYO186103:0:Tno----0
SPYO193567:0:Tno----0
SPYO198466:0:Tno----0
SPYO286636:0:Tno----0
SPYO293653:0:Tno----0
SPYO319701:0:Tyes----0
SPYO370551:0:Tno----0
SPYO370552:0:Tno----0
SPYO370553:0:Tno----0
SPYO370554:0:Tyes----0
SSAP342451:2:Tyes0-238-238
SSED425104:0:Tyes05424
SSOL273057:0:Tyes0----
SSON300269:1:Tyes94794320287
SSP292414:2:Tyes03116411661164
SSP321327:0:Tyes-01055-1055
SSP321332:0:Tyes780125211241252
SSP644076:6:Fyes--020
SSP644076:7:Fyes30---
SSP94122:1:Tyes50131
SSUI391295:0:Tyes0---666
SSUI391296:0:Tyes0---665
STHE264199:0:Tyes--0-0
STHE292459:0:Tyes-2239020
STHE299768:0:Tno--0-0
STHE322159:2:Tyes----0
STOK273063:0:Tyes0----
STYP99287:1:Tyes-223320341
SWOL335541:0:Tyes0----
TACI273075:0:Tyes0----
TERY203124:0:Tyes1668-030
TFUS269800:0:Tyes-4303
TLET416591:0:Tyes0----
TMAR243274:0:Tyes--202
TPAL243276:0:Tyes--202
TPEN368408:1:Tyes--0637-
TPET390874:0:Tno--020
TPSE340099:0:Tyes0----
TROS309801:0:Tyes0462---
TROS309801:1:Tyes--020
TSP1755:0:Tyes0----
TSP28240:0:Tyes--020
TTHE262724:1:Tyes89-020
TTHE300852:2:Tyes91-020
TVOL273116:0:Tyes0----
VCHO:0:Tyes--020
VCHO345073:1:Tno--020
VEIS391735:1:Tyes45023901
VFIS312309:2:Tyes--202
VPAR223926:1:Tyes254248020
VVUL196600:2:Tyes--202
VVUL216895:1:Tno--020
XAUT78245:1:Tyes3980100310011003
XAXO190486:0:Tyes1011020
XCAM190485:0:Tyes1011020
XCAM314565:0:Tno1011911
XCAM316273:0:Tno1314020
XCAM487884:0:Tno10121012
XORY291331:0:Tno1011020
XORY342109:0:Tyes910020
XORY360094:0:Tno20211821
YENT393305:1:Tyes--202
YPES187410:5:Tno--020
YPES214092:3:Tno--202
YPES349746:2:Tno--202
YPES360102:3:Tyes--202
YPES377628:2:Tno--020
YPES386656:2:Tno--020
YPSE273123:2:Tno--144501445
YPSE349747:2:Tno--020



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