CANDIDATE ID: 604

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9947850e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages

GENE LIST:

- M004 (rpe) (b3386)
   Products of gene:
     - RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)
       Reactions:
        D-ribulose-5-phosphate  =  D-xylulose-5-phosphate
         In pathways
         PWY-5257 (PWY-5257)
         PENTOSE-P-PWY (pentose phosphate pathway)
         PHOTOALL-PWY (PHOTOALL-PWY)
         DARABCAT-PWY (DARABCAT-PWY)
         RIBITOLUTIL-PWY (RIBITOLUTIL-PWY)
         P122-PWY (P122-PWY)
         P21-PWY (P21-PWY)
         PWY-1861 (PWY-1861)
         P185-PWY (P185-PWY)
         P124-PWY (P124-PWY)
         NONOXIPENT-PWY (pentose phosphate pathway (non-oxidative branch))
         PWY-5723 (PWY-5723)
         CALVIN-PWY (CALVIN-PWY)

- EG11028 (trpE) (b1264)
   Products of gene:
     - ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
     - ANTHRANSYN-CPLX (anthranilate synthase)
       Reactions:
        chorismate + L-glutamine  ->  anthranilate + pyruvate + L-glutamate + H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         PWY-5958 (PWY-5958)
         TRPSYN-PWY (tryptophan biosynthesis)

- EG11027 (trpD) (b1263)
   Products of gene:
     - ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
       Reactions:
        anthranilate + 5-phospho-alpha-D-ribose 1-diphosphate  ->  N-(5'-phosphoribosyl)-anthranilate + diphosphate
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         TRPSYN-PWY (tryptophan biosynthesis)
     - ANTHRANSYN-CPLX (anthranilate synthase)
       Reactions:
        chorismate + L-glutamine  ->  anthranilate + pyruvate + L-glutamate + H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         PWY-5958 (PWY-5958)
         TRPSYN-PWY (tryptophan biosynthesis)

- EG11026 (trpC) (b1262)
   Products of gene:
     - PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
       Reactions:
        1-(o-carboxyphenylamino)-1'-deoxyribulose-5'-phosphate + H+  ->  indole-3-glycerol-phosphate + CO2 + H2O
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         TRPSYN-PWY (tryptophan biosynthesis)
        N-(5'-phosphoribosyl)-anthranilate  ->  1-(o-carboxyphenylamino)-1'-deoxyribulose-5'-phosphate
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         TRPSYN-PWY (tryptophan biosynthesis)

- EG10682 (pabA) (b3360)
   Products of gene:
     - PABASYN-COMPII-MONOMER (PabA)
     - PABASYN-CPLX (aminodeoxychorismate synthase)
       Reactions:
        L-glutamine + chorismate  =  4-amino-4-deoxychorismate + L-glutamate
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         FOLSYN-PWY (tetrahydrofolate biosynthesis)
         PWY-6543 (PWY-6543)
     - PABSYNMULTI-CPLX (para-aminobenzoate synthase multi-enzyme complex)

Back to top

ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 325
Effective number of orgs (counting one per cluster within 468 clusters): 240

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	# genes in group found in org
ZMOB264203 ncbi	Zymomonas mobilis mobilis ZM4	4
YPSE349747 ncbi	Yersinia pseudotuberculosis IP 31758	5
YPSE273123 ncbi	Yersinia pseudotuberculosis IP 32953	5
YPES386656 ncbi	Yersinia pestis Pestoides F	5
YPES377628 ncbi	Yersinia pestis Nepal516	5
YPES360102 ncbi	Yersinia pestis Antiqua	5
YPES349746 ncbi	Yersinia pestis Angola	5
YPES214092 ncbi	Yersinia pestis CO92	5
YPES187410 ncbi	Yersinia pestis KIM 10	4
YENT393305 ncbi	Yersinia enterocolitica enterocolitica 8081	5
XORY360094 ncbi	Xanthomonas oryzae pv. oryzae PXO99A	5
XORY342109 ncbi	Xanthomonas oryzae pv. oryzae MAFF 311018	5
XORY291331 ncbi	Xanthomonas oryzae pv. oryzae KACC10331	5
XFAS405440 ncbi	Xylella fastidiosa M12	5
XFAS183190 ncbi	Xylella fastidiosa Temecula1	5
XFAS160492 ncbi	Xylella fastidiosa 9a5c	5
XCAM487884	Xanthomonas campestris pv. paulliniae	5
XCAM316273 ncbi	Xanthomonas campestris pv. vesicatoria str. 85-10	5
XCAM314565 ncbi	Xanthomonas campestris pv. campestris str. 8004	5
XCAM190485 ncbi	Xanthomonas campestris pv. campestris str. ATCC 33913	5
XAXO190486 ncbi	Xanthomonas axonopodis pv. citri str. 306	5
XAUT78245 ncbi	Xanthobacter autotrophicus Py2	5
WSUC273121 ncbi	Wolinella succinogenes DSM 1740	4
VVUL216895 ncbi	Vibrio vulnificus CMCP6	5
VVUL196600 ncbi	Vibrio vulnificus YJ016	5
VPAR223926 ncbi	Vibrio parahaemolyticus RIMD 2210633	5
VFIS312309 ncbi	Vibrio fischeri ES114	5
VEIS391735 ncbi	Verminephrobacter eiseniae EF01-2	5
VCHO345073 ncbi	Vibrio cholerae O395	5
VCHO ncbi	Vibrio cholerae O1 biovar El Tor str. N16961	5
TTUR377629 ncbi	Teredinibacter turnerae T7901	5
TTHE300852 ncbi	Thermus thermophilus HB8	5
TTHE262724 ncbi	Thermus thermophilus HB27	4
TTEN273068 ncbi	Thermoanaerobacter tengcongensis MB4	5
TSP1755	Thermoanaerobacter sp.	5
TROS309801 ncbi	Thermomicrobium roseum DSM 5159	5
TPSE340099 ncbi	Thermoanaerobacter pseudethanolicus ATCC 33223	5
TERY203124 ncbi	Trichodesmium erythraeum IMS101	5
TELO197221 ncbi	Thermosynechococcus elongatus BP-1	4
TDEN292415 ncbi	Thiobacillus denitrificans ATCC 25259	5
TCRU317025 ncbi	Thiomicrospira crunogena XCL-2	5
STYP99287 ncbi	Salmonella enterica enterica serovar Typhimurium str. LT2	5
STRO369723 ncbi	Salinispora tropica CNB-440	4
STHE292459 ncbi	Symbiobacterium thermophilum IAM 14863	5
SSP94122 ncbi	Shewanella sp. ANA-3	5
SSP84588 ncbi	Synechococcus sp. WH 8102	5
SSP64471 ncbi	Synechococcus sp. CC9311	5
SSP644076	Silicibacter sp. TrichCH4B	5
SSP321332 ncbi	Synechococcus sp. JA-2-3Ba(2-13)	5
SSP321327 ncbi	Synechococcus sp. JA-3-3Ab	5
SSP292414 ncbi	Ruegeria sp. TM1040	5
SSP1148 ncbi	Synechocystis sp. PCC 6803	5
SSP1131	Synechococcus sp. CC9605	5
SSON300269 ncbi	Shigella sonnei Ss046	5
SSED425104 ncbi	Shewanella sediminis HAW-EB3	5
SRUB309807 ncbi	Salinibacter ruber DSM 13855	4
SPRO399741 ncbi	Serratia proteamaculans 568	5
SPNE488221 ncbi	Streptococcus pneumoniae 70585	4
SPNE487213 ncbi	Streptococcus pneumoniae Taiwan19F-14	4
SPNE171101 ncbi	Streptococcus pneumoniae R6	4
SPNE170187 ncbi	Streptococcus pneumoniae G54	4
SPEA398579 ncbi	Shewanella pealeana ATCC 700345	5
SONE211586 ncbi	Shewanella oneidensis MR-1	5
SLOI323850 ncbi	Shewanella loihica PV-4	5
SLAC55218	Ruegeria lacuscaerulensis	5
SHIGELLA ncbi	Shigella flexneri 2a str. 2457T	5
SHAL458817 ncbi	Shewanella halifaxensis HAW-EB4	5
SGLO343509 ncbi	Sodalis glossinidius morsitans	5
SFUM335543 ncbi	Syntrophobacter fumaroxidans MPOB	4
SFLE373384 ncbi	Shigella flexneri 5 str. 8401	5
SFLE198214 ncbi	Shigella flexneri 2a str. 301	5
SENT454169 ncbi	Salmonella enterica enterica serovar Heidelberg str. SL476	5
SENT321314 ncbi	Salmonella enterica enterica serovar Choleraesuis str. SC-B67	5
SENT295319 ncbi	Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150	5
SENT220341 ncbi	Salmonella enterica enterica serovar Typhi str. CT18	4
SENT209261 ncbi	Salmonella enterica enterica serovar Typhi str. Ty2	5
SELO269084 ncbi	Synechococcus elongatus PCC 6301	5
SDYS300267 ncbi	Shigella dysenteriae Sd197	5
SDEN318161 ncbi	Shewanella denitrificans OS217	5
SDEG203122 ncbi	Saccharophagus degradans 2-40	5
SCO ncbi	Streptomyces coelicolor A3(2)	5
SBOY300268 ncbi	Shigella boydii Sb227	5
SBAL402882 ncbi	Shewanella baltica OS185	5
SBAL399599 ncbi	Shewanella baltica OS195	5
SAVE227882 ncbi	Streptomyces avermitilis MA-4680	4
SARE391037 ncbi	Salinispora arenicola CNS-205	4
SALA317655 ncbi	Sphingopyxis alaskensis RB2256	4
SACI56780 ncbi	Syntrophus aciditrophicus SB	5
RXYL266117 ncbi	Rubrobacter xylanophilus DSM 9941	5
RSPH349102 ncbi	Rhodobacter sphaeroides ATCC 17025	5
RSPH349101 ncbi	Rhodobacter sphaeroides ATCC 17029	5
RSPH272943 ncbi	Rhodobacter sphaeroides 2.4.1	5
RSP357808 ncbi	Roseiflexus sp. RS-1	5
RSP101510 ncbi	Rhodococcus jostii RHA1	4
RSOL267608 ncbi	Ralstonia solanacearum GMI1000	5
RSAL288705 ncbi	Renibacterium salmoninarum ATCC 33209	4
RRUB269796 ncbi	Rhodospirillum rubrum ATCC 11170	5
RPOM246200 ncbi	Ruegeria pomeroyi DSS-3	5
RMET266264 ncbi	Ralstonia metallidurans CH34	5
RFER338969 ncbi	Rhodoferax ferrireducens T118	5
REUT381666 ncbi	Ralstonia eutropha H16	5
REUT264198 ncbi	Ralstonia eutropha JMP134	5
RDEN375451 ncbi	Roseobacter denitrificans OCh 114	5
RCAS383372 ncbi	Roseiflexus castenholzii DSM 13941	4
RALB246199	Ruminococcus albus 8	4
PTHE370438 ncbi	Pelotomaculum thermopropionicum SI	5
PSYR223283 ncbi	Pseudomonas syringae pv. tomato str. DC3000	4
PSYR205918 ncbi	Pseudomonas syringae pv. syringae B728a	5
PSTU379731 ncbi	Pseudomonas stutzeri A1501	5
PSP56811	Psychrobacter sp.	4
PSP312153 ncbi	Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1	5
PSP296591 ncbi	Polaromonas sp. JS666	5
PSP117	Pirellula sp.	4
PPUT76869 ncbi	Pseudomonas putida GB-1	5
PPUT351746 ncbi	Pseudomonas putida F1	5
PPUT160488 ncbi	Pseudomonas putida KT2440	5
PPRO298386 ncbi	Photobacterium profundum SS9	5
PNAP365044 ncbi	Polaromonas naphthalenivorans CJ2	5
PMUL272843 ncbi	Pasteurella multocida multocida Pm70	4
PMEN399739 ncbi	Pseudomonas mendocina ymp	5
PMAR74547 ncbi	Prochlorococcus marinus MIT 9313	5
PMAR59920 ncbi	Prochlorococcus marinus NATL2A	4
PMAR167555 ncbi	Prochlorococcus marinus NATL1A	4
PMAR167539 ncbi	Prochlorococcus marinus marinus CCMP1375	4
PLUT319225 ncbi	Chlorobium luteolum DSM 273	4
PLUM243265 ncbi	Photorhabdus luminescens laumondii TTO1	5
PING357804 ncbi	Psychromonas ingrahamii 37	5
PHAL326442 ncbi	Pseudoalteromonas haloplanktis TAC125	5
PFLU220664 ncbi	Pseudomonas fluorescens Pf-5	4
PFLU216595 ncbi	Pseudomonas fluorescens SBW25	4
PFLU205922 ncbi	Pseudomonas fluorescens Pf0-1	4
PENT384676 ncbi	Pseudomonas entomophila L48	5
PCRY335284 ncbi	Psychrobacter cryohalolentis K5	4
PCAR338963 ncbi	Pelobacter carbinolicus DSM 2380	5
PATL342610 ncbi	Pseudoalteromonas atlantica T6c	5
PARC259536 ncbi	Psychrobacter arcticus 273-4	4
PAER208964 ncbi	Pseudomonas aeruginosa PAO1	5
PAER208963 ncbi	Pseudomonas aeruginosa UCBPP-PA14	5
OIHE221109 ncbi	Oceanobacillus iheyensis HTE831	5
NSP387092 ncbi	Nitratiruptor sp. SB155-2	4
NSP103690 ncbi	Nostoc sp. PCC 7120	5
NOCE323261 ncbi	Nitrosococcus oceani ATCC 19707	5
NMUL323848 ncbi	Nitrosospira multiformis ATCC 25196	5
NMEN374833 ncbi	Neisseria meningitidis 053442	5
NMEN272831 ncbi	Neisseria meningitidis FAM18	5
NMEN122587 ncbi	Neisseria meningitidis Z2491	5
NMEN122586 ncbi	Neisseria meningitidis MC58	5
NGON242231 ncbi	Neisseria gonorrhoeae FA 1090	5
NEUT335283 ncbi	Nitrosomonas eutropha C91	4
NEUR228410 ncbi	Nitrosomonas europaea ATCC 19718	5
NARO279238 ncbi	Novosphingobium aromaticivorans DSM 12444	5
MXAN246197 ncbi	Myxococcus xanthus DK 1622	4
MVAN350058 ncbi	Mycobacterium vanbaalenii PYR-1	4
MTUB419947 ncbi	Mycobacterium tuberculosis H37Ra	4
MTUB336982 ncbi	Mycobacterium tuberculosis F11	4
MTHE264732 ncbi	Moorella thermoacetica ATCC 39073	5
MTBRV ncbi	Mycobacterium tuberculosis H37Rv	4
MTBCDC ncbi	Mycobacterium tuberculosis CDC1551	4
MSUC221988 ncbi	Mannheimia succiniciproducens MBEL55E	4
MSP409	Methylobacterium sp.	5
MSP400668 ncbi	Marinomonas sp. MWYL1	4
MSP189918 ncbi	Mycobacterium sp. KMS	4
MSP164757 ncbi	Mycobacterium sp. JLS	4
MSP164756 ncbi	Mycobacterium sp. MCS	4
MSME246196 ncbi	Mycobacterium smegmatis MC2 155	4
MPET420662 ncbi	Methylibium petroleiphilum PM1	5
MMAR394221 ncbi	Maricaulis maris MCS10	5
MMAG342108 ncbi	Magnetospirillum magneticum AMB-1	5
MLEP272631 ncbi	Mycobacterium leprae TN	4
MLAB410358 ncbi	Methanocorpusculum labreanum Z	4
MJAN243232 ncbi	Methanocaldococcus jannaschii DSM 2661	4
MGIL350054 ncbi	Mycobacterium gilvum PYR-GCK	4
MFLA265072 ncbi	Methylobacillus flagellatus KT	5
MEXT419610 ncbi	Methylobacterium extorquens PA1	5
MCAP243233 ncbi	Methylococcus capsulatus Bath	5
MBOV410289 ncbi	Mycobacterium bovis BCG str. Pasteur 1173P2	4
MBOV233413 ncbi	Mycobacterium bovis AF2122/97	4
MAVI243243 ncbi	Mycobacterium avium 104	4
MAQU351348 ncbi	Marinobacter aquaeolei VT8	5
MAER449447 ncbi	Microcystis aeruginosa NIES-843	4
MABS561007 ncbi	Mycobacterium abscessus ATCC 19977	4
LWEL386043 ncbi	Listeria welshimeri serovar 6b str. SLCC5334	5
LSPH444177 ncbi	Lysinibacillus sphaericus C3-41	4
LPNE400673 ncbi	Legionella pneumophila Corby	4
LPNE297246 ncbi	Legionella pneumophila Paris	4
LPNE297245 ncbi	Legionella pneumophila Lens	4
LPNE272624 ncbi	Legionella pneumophila pneumophila Philadelphia 1	4
LMON265669 ncbi	Listeria monocytogenes 4b F2365	4
LMON169963 ncbi	Listeria monocytogenes EGD-e	4
LMES203120 ncbi	Leuconostoc mesenteroides mesenteroides ATCC 8293	4
LLAC272623 ncbi	Lactococcus lactis lactis Il1403	4
LINN272626 ncbi	Listeria innocua Clip11262	5
LCHO395495 ncbi	Leptothrix cholodnii SP-6	5
KPNE272620 ncbi	Klebsiella pneumoniae pneumoniae MGH 78578	5
JSP375286 ncbi	Janthinobacterium sp. Marseille	5
JSP290400 ncbi	Jannaschia sp. CCS1	5
ILOI283942 ncbi	Idiomarina loihiensis L2TR	5
HSOM228400 ncbi	Haemophilus somnus 2336	4
HNEP81032	Hyphomonas neptunium	5
HMOD498761 ncbi	Heliobacterium modesticaldum Ice1	4
HINF71421 ncbi	Haemophilus influenzae Rd KW20	4
HINF374930 ncbi	Haemophilus influenzae PittEE	4
HINF281310 ncbi	Haemophilus influenzae 86-028NP	4
HHEP235279 ncbi	Helicobacter hepaticus ATCC 51449	4
HHAL349124 ncbi	Halorhodospira halophila SL1	5
HCHE349521 ncbi	Hahella chejuensis KCTC 2396	5
HAUR316274 ncbi	Herpetosiphon aurantiacus ATCC 23779	5
HARS204773 ncbi	Herminiimonas arsenicoxydans	5
GVIO251221 ncbi	Gloeobacter violaceus PCC 7421	5
GURA351605 ncbi	Geobacter uraniireducens Rf4	4
GTHE420246 ncbi	Geobacillus thermodenitrificans NG80-2	5
GSUL243231 ncbi	Geobacter sulfurreducens PCA	5
GMET269799 ncbi	Geobacter metallireducens GS-15	4
GKAU235909 ncbi	Geobacillus kaustophilus HTA426	5
GBET391165 ncbi	Granulibacter bethesdensis CGDNIH1	5
FTUL458234 ncbi	Francisella tularensis holarctica FTNF002-00	4
FTUL418136 ncbi	Francisella tularensis tularensis WY96-3418	4
FTUL401614 ncbi	Francisella novicida U112	4
FTUL393011 ncbi	Francisella tularensis holarctica OSU18	4
FPHI484022 ncbi	Francisella philomiragia philomiragia ATCC 25017	4
ESP42895	Enterobacter sp.	5
ELIT314225 ncbi	Erythrobacter litoralis HTCC2594	4
EFER585054 ncbi	Escherichia fergusonii ATCC 35469	5
ECOO157 ncbi	Escherichia coli O157:H7 EDL933	5
ECOL83334	Escherichia coli O157:H7	5
ECOL585397 ncbi	Escherichia coli ED1a	5
ECOL585057 ncbi	Escherichia coli IAI39	5
ECOL585056 ncbi	Escherichia coli UMN026	5
ECOL585055 ncbi	Escherichia coli 55989	5
ECOL585035 ncbi	Escherichia coli S88	5
ECOL585034 ncbi	Escherichia coli IAI1	5
ECOL481805 ncbi	Escherichia coli ATCC 8739	5
ECOL469008 ncbi	Escherichia coli BL21(DE3)	5
ECOL439855 ncbi	Escherichia coli SMS-3-5	5
ECOL413997 ncbi	Escherichia coli B str. REL606	5
ECOL409438 ncbi	Escherichia coli SE11	5
ECOL405955 ncbi	Escherichia coli APEC O1	5
ECOL364106 ncbi	Escherichia coli UTI89	5
ECOL362663 ncbi	Escherichia coli 536	5
ECOL331111 ncbi	Escherichia coli E24377A	5
ECOL316407 ncbi	Escherichia coli K-12 substr. W3110	5
ECOL199310 ncbi	Escherichia coli CFT073	4
ECAR218491 ncbi	Pectobacterium atrosepticum SCRI1043	5
DSHI398580 ncbi	Dinoroseobacter shibae DFL 12	5
DRED349161 ncbi	Desulfotomaculum reducens MI-1	5
DPSY177439 ncbi	Desulfotalea psychrophila LSv54	5
DOLE96561 ncbi	Desulfococcus oleovorans Hxd3	5
DHAF138119 ncbi	Desulfitobacterium hafniense Y51	4
DARO159087 ncbi	Dechloromonas aromatica RCB	5
CVIO243365 ncbi	Chromobacterium violaceum ATCC 12472	5
CVES412965 ncbi	Candidatus Vesicomyosocius okutanii HA	5
CSP78	Caulobacter sp.	5
CSP501479	Citreicella sp. SE45	5
CSAL290398 ncbi	Chromohalobacter salexigens DSM 3043	5
CRUT413404 ncbi	Candidatus Ruthia magnifica Cm (Calyptogena magnifica)	5
CPSY167879 ncbi	Colwellia psychrerythraea 34H	5
CPHY357809 ncbi	Clostridium phytofermentans ISDg	5
CPEL335992 ncbi	Candidatus Pelagibacter ubique HTCC1062	4
CKLU431943 ncbi	Clostridium kluyveri DSM 555	5
CJAP155077	Cellvibrio japonicus	5
CHYD246194 ncbi	Carboxydothermus hydrogenoformans Z-2901	4
CFET360106 ncbi	Campylobacter fetus fetus 82-40	4
CEFF196164 ncbi	Corynebacterium efficiens YS-314	4
CDES477974 ncbi	Candidatus Desulforudis audaxviator MP104C	5
CCHL340177 ncbi	Chlorobium chlorochromatii CaD3	4
CBLO291272 ncbi	Candidatus Blochmannia pennsylvanicus BPEN	5
CBLO203907 ncbi	Candidatus Blochmannia floridanus	5
CBEI290402 ncbi	Clostridium beijerinckii NCIMB 8052	4
CAULO ncbi	Caulobacter crescentus CB15	5
CACE272562 ncbi	Clostridium acetobutylicum ATCC 824	5
BWEI315730 ncbi	Bacillus weihenstephanensis KBAB4	4
BVIE269482 ncbi	Burkholderia vietnamiensis G4	5
BTHU412694 ncbi	Bacillus thuringiensis Al Hakam	4
BTHU281309 ncbi	Bacillus thuringiensis serovar konkukian str. 97-27	4
BTHA271848 ncbi	Burkholderia thailandensis E264	5
BSP36773	Burkholderia sp.	5
BSP107806 ncbi	Buchnera aphidicola APS (Acyrthosiphon pisum)	4
BPUM315750 ncbi	Bacillus pumilus SAFR-032	5
BPSE320373 ncbi	Burkholderia pseudomallei 668	5
BPSE320372 ncbi	Burkholderia pseudomallei 1710b	5
BPSE272560 ncbi	Burkholderia pseudomallei K96243	5
BPET94624	Bordetella petrii	5
BPER257313 ncbi	Bordetella pertussis Tohama I	5
BPAR257311 ncbi	Bordetella parapertussis 12822	5
BMAL320389 ncbi	Burkholderia mallei NCTC 10247	5
BMAL320388 ncbi	Burkholderia mallei SAVP1	5
BMAL243160 ncbi	Burkholderia mallei ATCC 23344	5
BJAP224911 ncbi	Bradyrhizobium japonicum USDA 110	4
BHAL272558 ncbi	Bacillus halodurans C-125	4
BCLA66692 ncbi	Bacillus clausii KSM-K16	5
BCER572264 ncbi	Bacillus cereus 03BB102	4
BCER405917	Bacillus cereus W	4
BCER288681 ncbi	Bacillus cereus E33L	4
BCER226900 ncbi	Bacillus cereus ATCC 14579	5
BCEN331272 ncbi	Burkholderia cenocepacia HI2424	5
BCEN331271 ncbi	Burkholderia cenocepacia AU 1054	5
BBRO257310 ncbi	Bordetella bronchiseptica RB50	5
BANT592021 ncbi	Bacillus anthracis A0248	5
BANT568206 ncbi	Bacillus anthracis CDC 684	5
BANT261594 ncbi	Bacillus anthracis Ames Ancestor	5
BANT260799 ncbi	Bacillus anthracis Sterne	5
BAMY326423 ncbi	Bacillus amyloliquefaciens FZB42	4
BAMB398577 ncbi	Burkholderia ambifaria MC40-6	5
BAMB339670 ncbi	Burkholderia ambifaria AMMD	5
AVAR240292 ncbi	Anabaena variabilis ATCC 29413	5
ASP76114 ncbi	Aromatoleum aromaticum EbN1	5
ASP62977 ncbi	Acinetobacter sp. ADP1	5
ASP62928 ncbi	Azoarcus sp. BH72	5
ASP232721 ncbi	Acidovorax sp. JS42	5
ASAL382245 ncbi	Aeromonas salmonicida salmonicida A449	5
APLE434271 ncbi	Actinobacillus pleuropneumoniae serovar 3 str. JL03	4
APLE416269 ncbi	Actinobacillus pleuropneumoniae L20	4
AMET293826 ncbi	Alkaliphilus metalliredigens QYMF	5
AMAR329726 ncbi	Acaryochloris marina MBIC11017	5
AHYD196024	Aeromonas hydrophila dhakensis	5
AFER243159 ncbi	Acidithiobacillus ferrooxidans ATCC 23270	5
AEHR187272 ncbi	Alkalilimnicola ehrlichii MLHE-1	5
ADEH290397 ncbi	Anaeromyxobacter dehalogenans 2CP-C	5
ACRY349163 ncbi	Acidiphilium cryptum JF-5	5
ACAU438753 ncbi	Azorhizobium caulinodans ORS 571	5
ABOR393595 ncbi	Alcanivorax borkumensis SK2	5
ABAU360910 ncbi	Bordetella avium 197N	5
ABAC204669 ncbi	Candidatus Koribacter versatilis Ellin345	5
AAVE397945 ncbi	Acidovorax citrulli AAC00-1	5
AAEO224324 ncbi	Aquifex aeolicus VF5	5

Names of the homologs of the genes in the group in each of these orgs

	M004	EG11028	EG11027	EG11026	EG10682
ZMOB264203	ZMO0018	ZMO0468		ZMO0545	ZMO0201
YPSE349747	YPSIP31758_3962	YPSIP31758_1932	YPSIP31758_1934	YPSIP31758_1935	YPSIP31758_3948
YPSE273123	YPTB3746	YPTB2130	YPTB2128	YPTB2127	YPTB3732
YPES386656	YPDSF_0082	YPDSF_0925	YPDSF_0927	YPDSF_0928	YPDSF_0097
YPES377628	YPN_3910	YPN_1677	YPN_1675	YPN_1674	YPN_3895
YPES360102	YPA_3314	YPA_1568	YPA_1566	YPA_1565	YPA_3300
YPES349746	YPANGOLA_A3723	YPANGOLA_A2312	YPANGOLA_A2314	YPANGOLA_A2315	YPANGOLA_A3705
YPES214092	YPO0155	YPO2208	YPO2206	YPO2205	YPO0169
YPES187410	Y3938	Y2051		Y2049	Y3953
YENT393305	YE3971	YE2209	YE2211	YE2212	YE3958
XORY360094	XOOORF_0822	XOOORF_0825	XOOORF_0642	XOOORF_0643	XOOORF_0639
XORY342109	XOO3827	XOO3824	XOO3936	XOO3935	XOO3938
XORY291331	XOO4052	XOO4049	XOO4161	XOO4160	XOO4163
XFAS405440	XFASM12_0177	XFASM12_0179	XFASM12_0181	XFASM12_0182	XFASM12_0180
XFAS183190	PD_0168	PD_0170	PD_0172	PD_0173	PD_0171
XFAS160492	XF0208	XF0210	XF0212	XF0213	XF0211
XCAM487884	XCC-B100_0491	XCC-B100_0494	XCC-B100_0499	XCC-B100_0500	XCC-B100_0497
XCAM316273	XCAORF_4051	XCAORF_4048	XCAORF_4043	XCAORF_4042	XCAORF_4045
XCAM314565	XC_0469	XC_0473	XC_0483	XC_0484	XC_0481
XCAM190485	XCC0455	XCC0459	XCC0469	XCC0470	XCC0467
XAXO190486	XAC0472	XAC0476	XAC0480	XAC0481	XAC0478
XAUT78245	XAUT_1911	XAUT_4378	XAUT_4376	XAUT_4375	XAUT_4377
WSUC273121	WS0219	WS0088		WS1912	WS2172
VVUL216895	VV1_1386	VV1_3064	VV1_3066	VV1_3067	VV1_1311
VVUL196600	VV2985	VV1221	VV1219	VV1218	VV3055
VPAR223926	VP2741	VP1956	VP1958	VP1959	VP2798
VFIS312309	VF2288	VF1033	VF1032	VF1029	VF2285
VEIS391735	VEIS_0587	VEIS_1212	VEIS_1210	VEIS_1209	VEIS_1211
VCHO345073	VC0395_A2202	VC0395_A0796	VC0395_A0794	VC0395_A0793	VC0395_A2196
VCHO	VC2625	VC1174	VC1172	VC1171	VC2619
TTUR377629	TERTU_3138	TERTU_3137	TERTU_3128	TERTU_3127	TERTU_3129
TTHE300852	TTHA0106	TTHA1844	TTHA1842	TTHA1164	TTHA1843
TTHE262724	TT_C1898	TT_C1493	TT_C1491		TT_C1492
TTEN273068	TTE1498	TTE1583	TTE1581	TTE1580	TTE1582
TSP1755	TETH514_1747	TETH514_1869	TETH514_1867	TETH514_1866	TETH514_1868
TROS309801	TRD_0613	TRD_0102	TRD_0104	TRD_0105	TRD_0103
TPSE340099	TETH39_1311	TETH39_0888	TETH39_0890	TETH39_0891	TETH39_0889
TERY203124	TERY_2606	TERY_3792	TERY_2308	TERY_3169	TERY_5029
TELO197221	TLL2369	TLL1672		TLL0698	TLR1471
TDEN292415	TBD_2230	TBD_2228	TBD_2223	TBD_2222	TBD_2224
TCRU317025	TCR_0264	TCR_0266	TCR_0268	TCR_0269	TCR_0267
STYP99287	STM3483	STM1723	STM1724	STM1725	STM3469
STRO369723	STROP_1872	STROP_3175		STROP_3172	STROP_0049
STHE292459	STH1355	STH1407	STH1409	STH1412	STH1408
SSP94122	SHEWANA3_3888	SHEWANA3_1520	SHEWANA3_1518	SHEWANA3_1517	SHEWANA3_0606
SSP84588	SYNW1115OR3469	SYNW2045OR2765	SYNW1025OR0047	SYNW1629OR3078	SYNW2315OR0962
SSP64471	GSYN1800	GSYN0484	GSYN1754	GSYN0794	GSYN2810
SSP644076	SCH4B_0617	SCH4B_4617	SCH4B_4613	SCH4B_4611	SCH4B_4614
SSP321332	CYB_2047	CYB_0535	CYB_0050	CYB_2343	CYB_2417
SSP321327	CYA_0084	CYA_2136	CYA_0630	CYA_2369	CYA_2654
SSP292414	TM1040_3710	TM1040_1143	TM1040_1140	TM1040_1138	TM1040_1141
SSP1148	SLL0807	SLR0738	SLR1867	SLR0546	SLR0055
SSP1131	SYNCC9605_1252	SYNCC9605_0398	SYNCC9605_1151	SYNCC9605_0870	SYNCC9605_2446
SSON300269	SSO_3517	SSO_1879	SSO_1880	SSO_1881	SSO_3491
SSED425104	SSED_4259	SSED_1686	SSED_1684	SSED_1683	SSED_0806
SRUB309807	SRU_0007	SRU_1662		SRU_1667	SRU_1665
SPRO399741	SPRO_4601	SPRO_2667	SPRO_2669	SPRO_2670	SPRO_4583
SPNE488221	SP70585_2054	SP70585_1878	SP70585_1876	SP70585_1875
SPNE487213	SPT_1962	SPT_1740	SPT_1738	SPT_1737
SPNE171101	SPR1797	SPR1637	SPR1635	SPR1634
SPNE170187	SPN09034	SPN02126	SPN02124	SPN02123
SPEA398579	SPEA_0244	SPEA_1590	SPEA_1588	SPEA_1587	SPEA_3519
SONE211586	SO_0292	SO_3019	SO_3021	SO_3022	SO_0613
SLOI323850	SHEW_0219	SHEW_2251	SHEW_2253	SHEW_2254	SHEW_0575
SLAC55218	SL1157_0319	SL1157_2768	SL1157_2765	SL1157_2764	SL1157_2766
SHIGELLA	RPE	TRPE	TRPD	TRPC	PABA
SHAL458817	SHAL_4076	SHAL_1658	SHAL_1656	SHAL_1655	SHAL_3613
SGLO343509	SG2305	SG1402	SG1400	SG1399	SG2302
SFUM335543	SFUM_1951	SFUM_1776	SFUM_1774		SFUM_1775
SFLE373384	SFV_3391	SFV_1278	SFV_1277	SFV_1276	SFV_3366
SFLE198214	AAN44866.1	AAN42880.1	AAN42879.1	AAN42878.1	AAN44842.1
SENT454169	SEHA_C3789	SEHA_C1913	SEHA_C1914	SEHA_C1915	SEHA_C3774
SENT321314	SCH_3415	SCH_1719	SCH_1720	SCH_1721	SCH_3403
SENT295319	SPA3348	SPA1154	SPA1153	SPA1152	SPA3335
SENT220341	STY4313	STY1328	STY1327		STY4327
SENT209261	T4023	T1635	T1636	T1637	T4036
SELO269084	SYC0920_C	SYC0542_C	SYC1969_D	SYC0353_D	SYC1115_D
SDYS300267	SDY_3693	SDY_1332	SDY_1331	SDY_1330	SDY_3522
SDEN318161	SDEN_0267	SDEN_2450	SDEN_2452	SDEN_2453	SDEN_3196
SDEG203122	SDE_0746	SDE_0747	SDE_0753	SDE_0754	SDE_0752
SCO	SCO1464	SCO2043	SCO3212	SCO3211	SCO3851
SBOY300268	SBO_3373	SBO_1802	SBO_1803	SBO_1804	SBO_3342
SBAL402882	SHEW185_4077	SHEW185_2722	SHEW185_2724	SHEW185_2725	SHEW185_3758
SBAL399599	SBAL195_4195	SBAL195_2801	SBAL195_2803	SBAL195_2804	SBAL195_3884
SAVE227882	SAV6880	SAV6171		SAV6175	SAV4335
SARE391037	SARE_1865	SARE_3400		SARE_3397	SARE_0054
SALA317655	SALA_3128	SALA_1174		SALA_0835	SALA_0837
SACI56780	SYN_01763	SYN_01947	SYN_01945	SYN_01944	SYN_01946
RXYL266117	RXYL_1363	RXYL_2115	RXYL_2095	RXYL_2094	RXYL_2096
RSPH349102	RSPH17025_1512	RSPH17025_3101	RSPH17025_3098	RSPH17025_3097	RSPH17025_3099
RSPH349101	RSPH17029_1430	RSPH17029_0714	RSPH17029_0711	RSPH17029_0710	RSPH17029_0712
RSPH272943	RSP_2864	RSP_2004	RSP_2001	RSP_6214	RSP_2002
RSP357808	ROSERS_1777	ROSERS_1455	ROSERS_1452	ROSERS_1252	ROSERS_1454
RSP101510	RHA1_RO07167	RHA1_RO01016		RHA1_RO01014	RHA1_RO03695
RSOL267608	RSC2879	RSC2881	RSP0681	RSP0680	RSC2882
RSAL288705	RSAL33209_2351	RSAL33209_2337		RSAL33209_2334	RSAL33209_2894
RRUB269796	RRU_A2402	RRU_A1891	RRU_A1896	RRU_A1897	RRU_A1895
RPOM246200	SPO_0779	SPO_2146	SPO_2150	SPO_2151	SPO_2149
RMET266264	RMET_3176	RMET_3178	RMET_3180	RMET_3181	RMET_3179
RFER338969	RFER_0532	RFER_3607	RFER_3602	RFER_3601	RFER_3605
REUT381666	H16_A3317	H16_A3319	H16_A3321	H16_A3322	H16_A3320
REUT264198	REUT_A3021	REUT_A3023	REUT_A3025	REUT_A3026	REUT_A3024
RDEN375451	RD1_1105	RD1_3205	RD1_3210	RD1_3213	RD1_3209
RCAS383372		RCAS_2156	RCAS_2153	RCAS_2858	RCAS_2155
RALB246199		GRAORF_1644	GRAORF_1643	GRAORF_1642	GRAORF_1643
PTHE370438	PTH_1779	PTH_1628	PTH_1626	PTH_1625	PTH_1627
PSYR223283	PSPTO_0566	PSPTO_0568		PSPTO_0594	PSPTO_0592
PSYR205918	PSYR_4611	PSYR_4609	PSYR_4580	PSYR_0756	PSYR_4581
PSTU379731	PST_0742	PST_0744	PST_0746	PST_0747	PST_0745
PSP56811	PSYCPRWF_0584		PSYCPRWF_1647	PSYCPRWF_1648	PSYCPRWF_1646
PSP312153	PNUC_0149	PNUC_0148	PNUC_0146	PNUC_0145	PNUC_0147
PSP296591	BPRO_4466	BPRO_4457	BPRO_4452	BPRO_4451	BPRO_4455
PSP117		RB7967	RB410	RB10114	RB6300
PPUT76869	PPUTGB1_0446	PPUTGB1_0448	PPUTGB1_0451	PPUTGB1_0452	PPUTGB1_0450
PPUT351746	PPUT_0449	PPUT_0451	PPUT_0454	PPUT_0455	PPUT_0453
PPUT160488	PP_0415	PP_0417	PP_0421	PP_0422	PP_0420
PPRO298386	PBPRA0284	PBPRA2486	PBPRA2488	PBPRA2489	PBPRA0288
PNAP365044	PNAP_3660	PNAP_3654	PNAP_3650	PNAP_3649	PNAP_3652
PMUL272843	PM1619	PM0584	PM0581	PM0580
PMEN399739	PMEN_3999	PMEN_3997	PMEN_3945	PMEN_3944	PMEN_3946
PMAR74547	PMT0569	PMT1711	PMT0654	PMT0336	PMT2067
PMAR59920		PMN2A_1149	PMN2A_0258	PMN2A_0863	PMN2A_1552
PMAR167555		NATL1_20231	NATL1_09271	NATL1_17161	NATL1_02601
PMAR167539		PRO_1732	PRO_0744	PRO_1371	PRO_0209
PLUT319225	PLUT_1649	PLUT_1468		PLUT_1650	PLUT_0356
PLUM243265	PLU0086	PLU2462	PLU2464	PLU2465	PLU0393
PING357804	PING_0167	PING_1060	PING_1058	PING_1057	PING_3615
PHAL326442	PSHAA2710	PSHAA1293	PSHAA1291	PSHAA1290	PSHAA0192
PFLU220664	PFL_5631	PFL_5629		PFL_5621	PFL_5623
PFLU216595	PFLU5563	PFLU5561		PFLU5558	PFLU5560
PFLU205922	PFL_5120	PFL_5118		PFL_5113	PFL_5115
PENT384676	PSEEN0442	PSEEN0444	PSEEN0448	PSEEN0449	PSEEN0447
PCRY335284	PCRYO_1994		PCRYO_1442	PCRYO_1443	PCRYO_1441
PCAR338963	PCAR_0240	PCAR_0730	PCAR_0732	PCAR_0733	PCAR_0731
PATL342610	PATL_0659	PATL_2829	PATL_2831	PATL_2832	PATL_0653
PARC259536	PSYC_1715		PSYC_0973	PSYC_0972	PSYC_0974
PAER208964	PA0607	PA1001	PA0650	PA0651	PA0649
PAER208963	PA14_07910	PA14_51360	PA14_08350	PA14_08360	PA14_08340
OIHE221109	OB1511	OB0527	OB0525	OB0524	OB0701
NSP387092	NIS_0320	NIS_1180		NIS_0989	NIS_0650
NSP103690	ALR0782	ALL0328	ALR1153	ALR4746	ALL0269
NOCE323261	NOC_2492	NOC_2494	NOC_2496	NOC_2497	NOC_2495
NMUL323848	NMUL_A2371	NMUL_A2369	NMUL_A2563	NMUL_A2562	NMUL_A2564
NMEN374833	NMCC_1125	NMCC_0965	NMCC_0910	NMCC_1870	NMCC_0909
NMEN272831	NMC1145	NMC1013	NMC0948	NMC0270	NMC0947
NMEN122587	NMA1413	NMA1247	NMA1164	NMA2212	NMA1163
NMEN122586	NMB_1244	NMB_1021	NMB_0967	NMB_0275	NMB_0966
NGON242231	NGO0758	NGO0872	NGO1203	NGO1721	NGO1204
NEUT335283	NEUT_2096	NEUT_2098	NEUT_0134		NEUT_0135
NEUR228410	NE2148	NE2150	NE0013	NE0012	NE0014
NARO279238	SARO_0104	SARO_2021	SARO_2023	SARO_2024	SARO_2022
MXAN246197	MXAN_6297	MXAN_6072	MXAN_6062		MXAN_1589
MVAN350058	MVAN_2689	MVAN_2814		MVAN_2816	MVAN_0022
MTUB419947	MRA_1417	MRA_1619		MRA_1621	MRA_0015
MTUB336982	TBFG_11437	TBFG_11625		TBFG_11627	TBFG_10013
MTHE264732	MOTH_0914	MOTH_1342	MOTH_1340	MOTH_1339	MOTH_1341
MTBRV	RV1408	RV1609		RV1611	RV0013
MTBCDC	MT1452	MT1644		MT1646	MT0016
MSUC221988	MS2330	MS1149	MS1151	MS1152
MSP409	M446_5429	M446_5398	M446_5395	M446_5394	M446_0052
MSP400668	MMWYL1_1057		MMWYL1_1062	MMWYL1_1063	MMWYL1_1061
MSP189918	MKMS_2432	MKMS_3112		MKMS_3110	MKMS_0022
MSP164757	MJLS_2426	MJLS_3069		MJLS_3067	MJLS_0014
MSP164756	MMCS_2385	MMCS_3053		MMCS_3051	MMCS_0014
MSME246196	MSMEG_3066	MSMEG_3217		MSMEG_3219	MSMEG_0029
MPET420662	MPE_A3466	MPE_A3463	MPE_A3461	MPE_A3460	MPE_A3462
MMAR394221	MMAR10_2925	MMAR10_1403	MMAR10_1400	MMAR10_1399	MMAR10_1401
MMAG342108	AMB1379	AMB1813	AMB2862	AMB2863	AMB2861
MLEP272631	ML0554	ML1269		ML1271	ML0015
MLAB410358		MLAB_1399	MLAB_1397	MLAB_1396	MLAB_1398
MJAN243232		MJ_1075	MJ_0234	MJ_0918	MJ_0238
MGIL350054	MFLV_3728	MFLV_3602		MFLV_3600	MFLV_0813
MFLA265072	MFLA_2472	MFLA_2471	MFLA_2467	MFLA_2465	MFLA_2468
MEXT419610	MEXT_0991	MEXT_4668	MEXT_4671	MEXT_4672	MEXT_3906
MCAP243233	MCA_2582	MCA_2584	MCA_2586	MCA_2587	MCA_2585
MBOV410289	BCG_1469	BCG_1647		BCG_1649	BCG_0043
MBOV233413	MB1443	MB1635		MB1637	MB0013
MAVI243243	MAV_3370	MAV_3177		MAV_3175	MAV_0018
MAQU351348	MAQU_3515	MAQU_3517	MAQU_3519	MAQU_3520	MAQU_3518
MAER449447	MAE_61690	MAE_23290		MAE_45030	MAE_23330
MABS561007	MAB_2809C	MAB_2647C		MAB_2645C	MAB_0032
LWEL386043	LWE1837	LWE1649	LWE1647	LWE1646	LWE2697
LSPH444177	BSPH_1495	BSPH_3628		BSPH_3919	BSPH_0095
LPNE400673	LPC_2628		LPC_2461	LPC_2462	LPC_2460
LPNE297246	LPP0721		LPP0896	LPP0895	LPP0897
LPNE297245	LPL0701		LPL0865	LPL0864	LPL0866
LPNE272624	LPG0664		LPG0834	LPG0833	LPG0835
LMON265669	LMOF2365_1846	LMOF2365_1655	LMOF2365_1653		LMOF2365_2736
LMON169963	LMO1818	LMO1633	LMO1631		LMO2749
LMES203120	LEUM_1509	LEUM_1171	LEUM_1175	LEUM_1174
LLAC272623	L0047	L0054	L0052		L0178
LINN272626	LIN1932	LIN1674	LIN1672	LIN1671	LIN2892
LCHO395495	LCHO_3899	LCHO_3897	LCHO_3877	LCHO_3876	LCHO_3878
KPNE272620	GKPORF_B3098	GKPORF_B0277	GKPORF_B0276	GKPORF_B0275	GKPORF_B3086
JSP375286	MMA_0237	MMA_0235	MMA_0233	MMA_0232	MMA_0234
JSP290400	JANN_0790	JANN_1882	JANN_1879	JANN_1877	JANN_1880
ILOI283942	IL2324	IL1751	IL1753	IL1754	IL2321
HSOM228400	HSM_0042	HSM_1315	HSM_1313	HSM_1312
HNEP81032	HNE_3370	HNE_1790	HNE_1788	HNE_1787	HNE_1789
HMOD498761	HM1_2140	HM1_1916	HM1_1918		HM1_1917
HINF71421	HI_0566	HI_1387	HI_1389	HI_1389.1
HINF374930	CGSHIEE_00135	CGSHIEE_04490	CGSHIEE_04510	CGSHIEE_04515
HINF281310	NTHI0698	NTHI1768	NTHI1764	NTHI1763
HHEP235279	HH_1346	HH_0315	HH_0314		HH_0314
HHAL349124	HHAL_1048	HHAL_2082	HHAL_2080	HHAL_2079	HHAL_2081
HCHE349521	HCH_06112	HCH_06125	HCH_06127	HCH_06128	HCH_06126
HAUR316274	HAUR_2292	HAUR_2962	HAUR_2688	HAUR_2990	HAUR_0597
HARS204773	HEAR0202	HEAR0200	HEAR0198	HEAR0197	HEAR0199
GVIO251221	GLL3548	GLR1717	GLL2795	GLL2556	GLR0883
GURA351605	GURA_0194	GURA_1731		GURA_1734	GURA_1732
GTHE420246	GTNG_1031	GTNG_2138	GTNG_2137	GTNG_2136	GTNG_0067
GSUL243231	GSU_3374	GSU_2383	GSU_2381	GSU_2380	GSU_2382
GMET269799	GMET_0067	GMET_2497		GMET_2494	GMET_2496
GKAU235909	GK1178	GK2204	GK2203	GK2202	GK0067
GBET391165	GBCGDNIH1_2141	GBCGDNIH1_0824	GBCGDNIH1_0820	GBCGDNIH1_0819	GBCGDNIH1_0821
FTUL458234	FTA_1520	FTA_2080	FTA_2078	FTA_2071
FTUL418136	FTW_0586	FTW_2025	FTW_2023	FTW_2017
FTUL401614	FTN_1221	FTN_1778	FTN_1776	FTN_1770
FTUL393011	FTH_1395	FTH_1883	FTH_1881	FTH_1875
FPHI484022	FPHI_1467	FPHI_0839	FPHI_0837	FPHI_0834
ESP42895	ENT638_3799	ENT638_2204	ENT638_2205	ENT638_2206	ENT638_3787
ELIT314225	ELI_12550	ELI_06485		ELI_06515	ELI_06505
EFER585054	EFER_3352	EFER_1692	EFER_1693	EFER_1694	EFER_3333
ECOO157	RPE	TRPE_1	TRPD	TRPC	PABA
ECOL83334	ECS4228	ECS1836	ECS1835	ECS1834	ECS4211
ECOL585397	ECED1_4044	ECED1_1471	ECED1_1470	ECED1_1469	ECED1_4024
ECOL585057	ECIAI39_3864	ECIAI39_1601	ECIAI39_1600	ECIAI39_1599	ECIAI39_3844
ECOL585056	ECUMN_3844	ECUMN_1563	ECUMN_1562	ECUMN_1561	ECUMN_3823
ECOL585055	EC55989_3791	EC55989_1422	EC55989_1421	EC55989_1420	EC55989_3766
ECOL585035	ECS88_3771	ECS88_1399	ECS88_1398	ECS88_1397	ECS88_3751
ECOL585034	ECIAI1_3524	ECIAI1_1284	ECIAI1_1283	ECIAI1_1282	ECIAI1_3499
ECOL481805	ECOLC_0327	ECOLC_2363	ECOLC_2364	ECOLC_2365	ECOLC_0352
ECOL469008	ECBD_0361	ECBD_2358	ECBD_2359	ECBD_2360	ECBD_0388
ECOL439855	ECSMS35_3662	ECSMS35_1868	ECSMS35_1869	ECSMS35_1870	ECSMS35_3642
ECOL413997	ECB_03238	ECB_01238	ECB_01237	ECB_01236	ECB_03211
ECOL409438	ECSE_3647	ECSE_1313	ECSE_1312	ECSE_1311	ECSE_3622
ECOL405955	APECO1_3077	APECO1_425	APECO1_424	APECO1_423	APECO1_3095
ECOL364106	UTI89_C3884	UTI89_C1533	UTI89_C1532	UTI89_C1531	UTI89_C3863
ECOL362663	ECP_3471	ECP_1312	ECP_1311	ECP_1310	ECP_3451
ECOL331111	ECE24377A_3855	ECE24377A_1463	ECE24377A_1462	ECE24377A_1461	ECE24377A_3830
ECOL316407	ECK3373:JW3349:B3386	ECK1258:JW1256:B1264	ECK1257:JW1255:B1263	ECK1256:JW1254:B1262	ECK3348:JW3323:B3360
ECOL199310	C4156	C1730	C1729		C4135
ECAR218491	ECA4089	ECA2296	ECA2298	ECA2299	ECA4066
DSHI398580	DSHI_3006	DSHI_1796	DSHI_1799	DSHI_1800	DSHI_1798
DRED349161	DRED_1716	DRED_0248	DRED_0250	DRED_0251	DRED_0249
DPSY177439	DP0795	DP1619	DP1621	DP1622	DP1620
DOLE96561	DOLE_2229	DOLE_1569	DOLE_1567	DOLE_1566	DOLE_1568
DHAF138119	DSY2683	DSY3202	DSY3199		DSY3275
DARO159087	DARO_3483	DARO_3481	DARO_3476	DARO_3475	DARO_3477
CVIO243365	CV_2182	CV_2179	CV_2173	CV_2712	CV_2175
CVES412965	COSY_0970	COSY_0734	COSY_0117	COSY_0756	COSY_0837
CSP78	CAUL_4780	CAUL_2771	CAUL_2777	CAUL_2778	CAUL_2776
CSP501479	CSE45_0792	CSE45_1775	CSE45_1863	CSE45_1865	CSE45_1862
CSAL290398	CSAL_2328	CSAL_2323	CSAL_2320	CSAL_2319	CSAL_2321
CRUT413404	RMAG_1071	RMAG_0809	RMAG_0112	RMAG_0832	RMAG_0931
CPSY167879	CPS_0479	CPS_3522	CPS_3524	CPS_3525	CPS_0638
CPHY357809	CPHY_2484	CPHY_3848	CPHY_3846	CPHY_3845	CPHY_3847
CPEL335992	SAR11_0317	SAR11_0925		SAR11_0922	SAR11_0924
CKLU431943	CKL_1377	CKL_1274	CKL_1276	CKL_1277	CKL_1275
CJAP155077	CJA_2666	CJA_2663	CJA_2661	CJA_2660	CJA_2662
CHYD246194		CHY_1587	CHY_1585	CHY_1584	CHY_1586
CFET360106	CFF8240_0861		CFF8240_0351	CFF8240_0640	CFF8240_0351
CEFF196164	CE1717	CE2868	CE2870	CE2871
CDES477974	DAUD_1586	DAUD_1191	DAUD_1189	DAUD_1188	DAUD_1190
CCHL340177	CAG_0175	CAG_0493		CAG_0174	CAG_0298
CBLO291272	BPEN_590	BPEN_438	BPEN_440	BPEN_441	BPEN_588
CBLO203907	BFL570	BFL426	BFL428	BFL429	BFL568
CBEI290402	CBEI_1153	CBEI_1749	CBEI_1751		CBEI_1750
CAULO	CC0101	CC1895	CC1898	CC1899	CC1897
CACE272562	CAC1730	CAC3163	CAC3161	CAC3160	CAC3162
BWEI315730	BCERKBAB4_3683	BCERKBAB4_1144	BCERKBAB4_1146		BCERKBAB4_0065
BVIE269482	BCEP1808_0513	BCEP1808_0511	BCEP1808_0509	BCEP1808_0508	BCEP1808_0510
BTHU412694	BALH_3491	BALH_1095	BALH_1097		BALH_0068
BTHU281309	BT9727_3601	BT9727_0064	BT9727_1138		BT9727_0065
BTHA271848	BTH_I2907	BTH_I2909	BTH_I2911	BTH_I2912	BTH_I2910
BSP36773	BCEP18194_A3623	BCEP18194_A3621	BCEP18194_A3619	BCEP18194_A3618	BCEP18194_A3620
BSP107806	BU537	BUPT01	BU280	BU279
BPUM315750	BPUM_1478	BPUM_1999	BPUM_1998	BPUM_1997	BPUM_0059
BPSE320373	BURPS668_3554	BURPS668_3556	BURPS668_3558	BURPS668_3559	BURPS668_3557
BPSE320372	BURPS1710B_A3856	BURPS1710B_A3858	BURPS1710B_A3860	BURPS1710B_A3861	BURPS1710B_A3859
BPSE272560	BPSL3048	BPSL3050	BPSL3052	BPSL3053	BPSL3051
BPET94624	BPET0322	BPET0320	BPET0318	BPET0317	BPET0319
BPER257313	BP3266	BP3264	BP3262	BP3261	BP3263
BPAR257311	BPP4154	BPP4156	BPP4158	BPP4159	BPP4157
BMAL320389	BMA10247_A1908	BMA10247_A1910	BMA10247_A1912	BMA10247_A1913	BMA10247_A1911
BMAL320388	BMASAVP1_0642	BMASAVP1_0644	BMASAVP1_0646	BMASAVP1_0647	BMASAVP1_0645
BMAL243160	BMA_A0535	BMA_A0533	BMA_A0531	BMA_A0530	BMA_A0532
BJAP224911	BLR2588		BLR4809	BLR4810	BLL2091
BHAL272558	BH2502	BH1659		BH1661	BH0091
BCLA66692	ABC2313	ABC1895	ABC1896	ABC1897	ABC0111
BCER572264	BCA_3960	BCA_1277	BCA_1279		BCA_0082
BCER405917	BCE_3902	BCE_1356	BCE_1358		BCE_0068
BCER288681	BCE33L3619	BCE33L0064	BCE33L1132		BCE33L0065
BCER226900	BC_3858	BC_1232	BC_1234	BC_1235	BC_0077
BCEN331272	BCEN2424_0536	BCEN2424_0534	BCEN2424_0532	BCEN2424_0531	BCEN2424_0533
BCEN331271	BCEN_2569	BCEN_2571	BCEN_2573	BCEN_2574	BCEN_2572
BBRO257310	BB4624	BB4626	BB4628	BB4629	BB4627
BANT592021	BAA_4022	BAA_1324	BAA_1326	BAA_1327	BAA_0082
BANT568206	BAMEG_0633	BAMEG_3342	BAMEG_3340	BAMEG_3339	BAMEG_0082
BANT261594	GBAA3998	GBAA1248	GBAA1250	GBAA1251	GBAA0069
BANT260799	BAS3711	BAS0068	BAS1158	BAS1159	BAS0069
BAMY326423	RBAM_015620	RBAM_020840		RBAM_020820	RBAM_000860
BAMB398577	BAMMC406_0465	BAMMC406_0463	BAMMC406_0461	BAMMC406_0460	BAMMC406_0462
BAMB339670	BAMB_0441	BAMB_0439	BAMB_0437	BAMB_0436	BAMB_0438
AVAR240292	AVA_4675	AVA_4721	AVA_4408	AVA_1926	AVA_2780
ASP76114	EBA4173	EBA4177	EBA4200	EBA4201	EBA4199
ASP62977	ACIAD0685	ACIAD0297	ACIAD2462	ACIAD2463	ACIAD2461
ASP62928	AZO3327	AZO3325	AZO3323	AZO3322	AZO3324
ASP232721	AJS_0361	AJS_0366	AJS_0369	AJS_0370	AJS_0368
ASAL382245	ASA_1129	ASA_1407	ASA_1405	ASA_1404	ASA_1133
APLE434271	APJL_1856	APJL_1183	APJL_1185	APJL_0870
APLE416269	APL_1820	APL_1163	APL_1165	APL_0859
AMET293826	AMET_2777	AMET_1077	AMET_1079	AMET_1080	AMET_2157
AMAR329726	AM1_1399	AM1_5143	AM1_2932	AM1_4360	AM1_1430
AHYD196024	AHA_3185	AHA_2923	AHA_2925	AHA_2926	AHA_3181
AFER243159	AFE_3086	AFE_3088	AFE_3090	AFE_3091	AFE_3089
AEHR187272	MLG_2834	MLG_2250	MLG_2248	MLG_2247	MLG_2249
ADEH290397	ADEH_3971	ADEH_4052	ADEH_4054	ADEH_4055	ADEH_4053
ACRY349163	ACRY_0827	ACRY_1234	ACRY_1233	ACRY_1232	ACRY_1233
ACAU438753	AZC_1810	AZC_2208	AZC_2206	AZC_2205	AZC_2207
ABOR393595	ABO_2042	ABO_2027	ABO_2025	ABO_2024	ABO_2026
ABAU360910	BAV3233	BAV3235	BAV3153	BAV3152	BAV3154
ABAC204669	ACID345_0074	ACID345_4120	ACID345_3885	ACID345_1156	ACID345_4125
AAVE397945	AAVE_0438	AAVE_0442	AAVE_0585	AAVE_0586	AAVE_0583
AAEO224324	AQ_968	AQ_582	AQ_196	AQ_1787	AQ_549

Organism features enriched in list (features available for 306 out of the 325 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Arrangment:Chains	0.0018460	36	92
Arrangment:Clusters	0.0000490	1	17
Endospores:No	2.011e-14	67	211
GC_Content_Range4:0-40	5.815e-21	58	213
GC_Content_Range4:40-60	0.0000111	142	224
GC_Content_Range4:60-100	3.525e-9	106	145
GC_Content_Range7:0-30	4.005e-10	5	47
GC_Content_Range7:30-40	1.750e-10	53	166
GC_Content_Range7:50-60	1.024e-8	82	107
GC_Content_Range7:60-70	1.305e-10	102	134
Genome_Size_Range5:0-2	1.426e-28	24	155
Genome_Size_Range5:2-4	0.0095329	92	197
Genome_Size_Range5:4-6	3.115e-26	154	184
Genome_Size_Range5:6-10	0.0002613	36	47
Genome_Size_Range9:0-1	0.0000347	4	27
Genome_Size_Range9:1-2	2.092e-22	20	128
Genome_Size_Range9:2-3	0.0065216	52	120
Genome_Size_Range9:4-5	2.906e-9	76	96
Genome_Size_Range9:5-6	7.009e-15	78	88
Genome_Size_Range9:6-8	0.0011704	29	38
Gram_Stain:Gram_Neg	4.483e-9	209	333
Gram_Stain:Gram_Pos	0.0001382	60	150
Habitat:Aquatic	0.0009036	61	91
Habitat:Host-associated	7.788e-8	78	206
Habitat:Multiple	0.0082082	105	178
Motility:No	0.0006706	63	151
Motility:Yes	1.149e-7	171	267
Optimal_temp.:-	0.0000196	159	257
Optimal_temp.:30-37	0.0014700	3	18
Optimal_temp.:37	0.0000112	36	106
Oxygen_Req:Aerobic	0.0007559	114	185
Oxygen_Req:Anaerobic	1.214e-8	28	102
Pathogenic_in:Human	0.0000310	89	213
Shape:Coccus	2.838e-6	24	82
Shape:Irregular_coccus	0.0000490	1	17
Shape:Rod	1.584e-14	227	347
Shape:Sphere	0.0008095	3	19
Shape:Spiral	0.0000745	7	34
Temp._range:Hyperthermophilic	0.0003935	4	23
Temp._range:Psychrophilic	0.0028566	9	9

ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 175
Effective number of orgs (counting one per cluster within 468 clusters): 131

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	# genes in group found in org
WPIP955	Wolbachia pipientis	1
WPIP80849	Wolbachia endosymbiont of Brugia malayi	0
UURE95667	Ureaplasma urealyticum serovar 13	0
UURE95664	Ureaplasma urealyticum serovar 10	0
UPAR505682 ncbi	Ureaplasma parvum serovar 3 str. ATCC 27815	0
TWHI218496 ncbi	Tropheryma whipplei TW08/27	0
TWHI203267 ncbi	Tropheryma whipplei Twist	0
TVOL273116 ncbi	Thermoplasma volcanium GSS1	0
TPEN368408 ncbi	Thermofilum pendens Hrk 5	0
TPAL243276 ncbi	Treponema pallidum pallidum Nichols	0
TLET416591 ncbi	Thermotoga lettingae TMO	0
TFUS269800 ncbi	Thermobifida fusca YX	1
TDEN243275 ncbi	Treponema denticola ATCC 35405	0
TACI273075 ncbi	Thermoplasma acidophilum DSM 1728	0
STOK273063 ncbi	Sulfolobus tokodaii 7	1
STHE322159 ncbi	Streptococcus thermophilus LMD-9	1
STHE299768 ncbi	Streptococcus thermophilus CNRZ1066	1
STHE264199 ncbi	Streptococcus thermophilus LMG 18311	1
SSUI391296 ncbi	Streptococcus suis 98HAH33	0
SSUI391295 ncbi	Streptococcus suis 05ZYH33	0
SSAP342451 ncbi	Staphylococcus saprophyticus saprophyticus ATCC 15305	1
SPYO370554 ncbi	Streptococcus pyogenes MGAS10750	0
SPYO370553 ncbi	Streptococcus pyogenes MGAS2096	0
SPYO370552 ncbi	Streptococcus pyogenes MGAS10270	0
SPYO370551 ncbi	Streptococcus pyogenes MGAS9429	0
SPYO319701 ncbi	Streptococcus pyogenes MGAS6180	0
SPYO293653 ncbi	Streptococcus pyogenes MGAS5005	0
SPYO286636 ncbi	Streptococcus pyogenes MGAS10394	0
SPYO198466 ncbi	Streptococcus pyogenes MGAS315	0
SPYO193567 ncbi	Streptococcus pyogenes SSI-1	0
SPYO186103 ncbi	Streptococcus pyogenes MGAS8232	0
SPYO160490 ncbi	Streptococcus pyogenes M1 GAS	0
SMAR399550 ncbi	Staphylothermus marinus F1	0
SHAE279808 ncbi	Staphylococcus haemolyticus JCSC1435	1
SAUR93062 ncbi	Staphylococcus aureus aureus COL	1
SAUR93061 ncbi	Staphylococcus aureus aureus NCTC 8325	1
SAUR426430 ncbi	Staphylococcus aureus aureus Newman	1
SAUR418127 ncbi	Staphylococcus aureus aureus Mu3	1
SAUR367830	Staphylococcus aureus aureus USA300	1
SAUR359787 ncbi	Staphylococcus aureus aureus JH1	1
SAUR359786 ncbi	Staphylococcus aureus aureus JH9	1
SAUR282459 ncbi	Staphylococcus aureus aureus MSSA476	1
SAUR282458 ncbi	Staphylococcus aureus aureus MRSA252	1
SAUR273036 ncbi	Staphylococcus aureus RF122	1
SAUR196620 ncbi	Staphylococcus aureus aureus MW2	1
SAUR158879 ncbi	Staphylococcus aureus aureus N315	1
SAUR158878 ncbi	Staphylococcus aureus aureus Mu50	1
SAGA211110 ncbi	Streptococcus agalactiae NEM316	0
SAGA208435 ncbi	Streptococcus agalactiae 2603V/R	0
SAGA205921 ncbi	Streptococcus agalactiae A909	0
SACI330779 ncbi	Sulfolobus acidocaldarius DSM 639	1
RTYP257363 ncbi	Rickettsia typhi Wilmington	0
RRIC452659 ncbi	Rickettsia rickettsii Iowa	0
RRIC392021 ncbi	Rickettsia rickettsii Sheila Smith	0
RPRO272947 ncbi	Rickettsia prowazekii Madrid E	0
RMAS416276 ncbi	Rickettsia massiliae MTU5	0
RFEL315456 ncbi	Rickettsia felis URRWXCal2	0
RCON272944 ncbi	Rickettsia conorii Malish 7	0
RCAN293613 ncbi	Rickettsia canadensis McKiel	0
RBEL391896 ncbi	Rickettsia bellii OSU 85-389	0
RBEL336407 ncbi	Rickettsia bellii RML369-C	0
RAKA293614 ncbi	Rickettsia akari Hartford	0
PTOR263820 ncbi	Picrophilus torridus DSM 9790	0
PRUM264731 ncbi	Prevotella ruminicola 23	1
PPEN278197 ncbi	Pediococcus pentosaceus ATCC 25745	0
PINT246198	Prevotella intermedia 17	1
PHOR70601 ncbi	Pyrococcus horikoshii OT3	0
PGIN242619 ncbi	Porphyromonas gingivalis W83	0
PFUR186497 ncbi	Pyrococcus furiosus DSM 3638	1
PAST100379	Onion yellows phytoplasma	0
PARS340102 ncbi	Pyrobaculum arsenaticum DSM 13514	1
PAER178306 ncbi	Pyrobaculum aerophilum IM2	1
PACN267747 ncbi	Propionibacterium acnes KPA171202	1
PABY272844 ncbi	Pyrococcus abyssi GE5	1
OTSU357244 ncbi	Orientia tsutsugamushi Boryong	0
NSP35761	Nocardioides sp.	1
NSEN222891 ncbi	Neorickettsia sennetsu Miyayama	0
MTHE349307 ncbi	Methanosaeta thermophila PT	1
MSYN262723 ncbi	Mycoplasma synoviae 53	0
MSTA339860 ncbi	Methanosphaera stadtmanae DSM 3091	1
MSED399549 ncbi	Metallosphaera sedula DSM 5348	1
MPUL272635 ncbi	Mycoplasma pulmonis UAB CTIP	0
MPNE272634 ncbi	Mycoplasma pneumoniae M129	0
MPEN272633 ncbi	Mycoplasma penetrans HF-2	0
MMYC272632 ncbi	Mycoplasma mycoides mycoides SC str. PG1	0
MMOB267748 ncbi	Mycoplasma mobile 163K	0
MMAZ192952 ncbi	Methanosarcina mazei Go1	1
MMAR444158 ncbi	Methanococcus maripaludis C6	0
MMAR426368 ncbi	Methanococcus maripaludis C7	0
MMAR402880 ncbi	Methanococcus maripaludis C5	0
MMAR267377 ncbi	Methanococcus maripaludis S2	0
MHYO295358 ncbi	Mycoplasma hyopneumoniae 232	0
MHYO262722 ncbi	Mycoplasma hyopneumoniae 7448	0
MHYO262719 ncbi	Mycoplasma hyopneumoniae J	0
MHUN323259 ncbi	Methanospirillum hungatei JF-1	1
MGEN243273 ncbi	Mycoplasma genitalium G37	0
MFLO265311 ncbi	Mesoplasma florum L1	0
MCAP340047 ncbi	Mycoplasma capricolum capricolum ATCC 27343	0
MART243272 ncbi	Mycoplasma arthritidis 158L3-1	0
MAEO419665 ncbi	Methanococcus aeolicus Nankai-3	0
MACE188937 ncbi	Methanosarcina acetivorans C2A	1
LXYL281090 ncbi	Leifsonia xyli xyli CTCB07	1
LSAK314315 ncbi	Lactobacillus sakei sakei 23K	1
LREU557436 ncbi	Lactobacillus reuteri DSM 20016	0
LJOH257314 ncbi	Lactobacillus johnsonii NCC 533	0
LINT363253 ncbi	Lawsonia intracellularis PHE/MN1-00	0
LHEL405566 ncbi	Lactobacillus helveticus DPC 4571	0
LGAS324831 ncbi	Lactobacillus gasseri ATCC 33323	0
LDEL390333 ncbi	Lactobacillus delbrueckii bulgaricus ATCC 11842	0
LDEL321956 ncbi	Lactobacillus delbrueckii bulgaricus ATCC BAA-365	0
LBRE387344 ncbi	Lactobacillus brevis ATCC 367	0
LACI272621 ncbi	Lactobacillus acidophilus NCFM	0
KRAD266940 ncbi	Kineococcus radiotolerans SRS30216	0
IHOS453591 ncbi	Ignicoccus hospitalis KIN4/I	0
HWAL362976 ncbi	Haloquadratum walsbyi DSM 16790	1
HSP64091 ncbi	Halobacterium sp. NRC-1	0
HSOM205914 ncbi	Haemophilus somnus 129PT	1
HSAL478009 ncbi	Halobacterium salinarum R1	0
HDUC233412 ncbi	Haemophilus ducreyi 35000HP	1
HBUT415426 ncbi	Hyperthermus butylicus DSM 5456	0
GFOR411154 ncbi	Gramella forsetii KT0803	1
FNUC190304 ncbi	Fusobacterium nucleatum nucleatum ATCC 25586	1
FNOD381764 ncbi	Fervidobacterium nodosum Rt17-B1	0
FMAG334413 ncbi	Finegoldia magna ATCC 29328	1
FJOH376686 ncbi	Flavobacterium johnsoniae UW101	1
ERUM302409 ncbi	Ehrlichia ruminantium Gardel	0
ERUM254945 ncbi	Ehrlichia ruminantium Welgevonden	0
EFAE226185 ncbi	Enterococcus faecalis V583	1
ECHA205920 ncbi	Ehrlichia chaffeensis Arkansas	1
ECAN269484 ncbi	Ehrlichia canis Jake	0
CTRA471473 ncbi	Chlamydia trachomatis L2b/UCH-1/proctitis	0
CTRA471472 ncbi	Chlamydia trachomatis 434/Bu	0
CTET212717 ncbi	Clostridium tetani E88	1
CSUL444179 ncbi	Candidatus Sulcia muelleri GWSS	0
CPRO264201 ncbi	Candidatus Protochlamydia amoebophila UWE25	1
CPNE182082 ncbi	Chlamydophila pneumoniae TW-183	0
CPNE138677 ncbi	Chlamydophila pneumoniae J138	0
CPNE115713 ncbi	Chlamydophila pneumoniae CWL029	0
CPNE115711 ncbi	Chlamydophila pneumoniae AR39	0
CMUR243161 ncbi	Chlamydia muridarum Nigg	0
CMAQ397948 ncbi	Caldivirga maquilingensis IC-167	0
CKOR374847 ncbi	Candidatus Korarchaeum cryptofilum OPF8	0
CHUT269798 ncbi	Cytophaga hutchinsonii ATCC 33406	1
CFEL264202 ncbi	Chlamydophila felis Fe/C-56	0
CCAV227941 ncbi	Chlamydophila caviae GPIC	0
CBUR360115 ncbi	Coxiella burnetii RSA 331	1
CBOT536232 ncbi	Clostridium botulinum A2 str. Kyoto	1
CBOT515621 ncbi	Clostridium botulinum Ba4 str. 657	1
CBOT508765 ncbi	Clostridium botulinum B str. Eklund 17B	1
CBOT498213 ncbi	Clostridium botulinum B1 str. Okra	1
CBOT441772 ncbi	Clostridium botulinum F str. Langeland	1
CBOT441771 ncbi	Clostridium botulinum A str. Hall	1
CBOT441770 ncbi	Clostridium botulinum A str. ATCC 19397	1
CBOT36826	Clostridium botulinum A	1
CABO218497 ncbi	Chlamydophila abortus S26/3	0
BXEN266265 ncbi	Burkholderia xenovorans LB400	1
BTUR314724 ncbi	Borrelia turicatae 91E135	0
BTRI382640 ncbi	Bartonella tribocorum CIP 105476	1
BQUI283165 ncbi	Bartonella quintana Toulouse	1
BHER314723 ncbi	Borrelia hermsii DAH	0
BHEN283166 ncbi	Bartonella henselae Houston-1	1
BGAR290434 ncbi	Borrelia garinii PBi	0
BBUR224326 ncbi	Borrelia burgdorferi B31	0
BBAC360095 ncbi	Bartonella bacilliformis KC583	1
BBAC264462 ncbi	Bdellovibrio bacteriovorus HD100	0
BAPH372461 ncbi	Buchnera aphidicola Cc (Cinara cedri)	1
BAFZ390236 ncbi	Borrelia afzelii PKo	0
AYEL322098 ncbi	Aster yellows witches-broom phytoplasma AYWB	0
AURANTIMONAS	Aurantimonas manganoxydans SI85-9A1	0
APHA212042 ncbi	Anaplasma phagocytophilum HZ	0
APER272557 ncbi	Aeropyrum pernix K1	1
AORE350688 ncbi	Alkaliphilus oremlandii OhILAs	1
AMAR234826 ncbi	Anaplasma marginale St. Maries	0
ALAI441768 ncbi	Acholeplasma laidlawii PG-8A	0
AFUL224325 ncbi	Archaeoglobus fulgidus DSM 4304	0

Names of the homologs of the genes in the group in each of these orgs

	M004	EG11028	EG11027	EG11026	EG10682
WPIP955	WD_0712
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276
TLET416591
TFUS269800	TFU_1077
TDEN243275
TACI273075
STOK273063		ST1229
STHE322159		STER_1554
STHE299768		STR1593
STHE264199		STU1593
SSUI391296
SSUI391295
SSAP342451		SSP1379
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMAR399550
SHAE279808				SH1539
SAUR93062				SACOL1406
SAUR93061				SAOUHSC_01369
SAUR426430				NWMN_1282
SAUR418127				SAHV_1358
SAUR367830				SAUSA300_1265
SAUR359787				SAURJH1_1460
SAUR359786				SAURJH9_1431
SAUR282459				SAS1310
SAUR282458				SAR1383
SAUR273036				SAB1225
SAUR196620				MW1257
SAUR158879				SA1202
SAUR158878				SAV1370
SAGA211110
SAGA208435
SAGA205921
SACI330779		SACI_1425
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PRUM264731					GFRORF1456
PPEN278197
PINT246198					PIN_A1835
PHOR70601
PGIN242619
PFUR186497			PF1710
PAST100379
PARS340102			PARS_1419
PAER178306			PAE2461
PACN267747				PPA1130
PABY272844			PAB2044
OTSU357244
NSP35761				NOCA_3027
NSEN222891
MTHE349307			MTHE_1539
MSYN262723
MSTA339860		MSP_1070
MSED399549		MSED_1687
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952			MM2820
MMAR444158
MMAR426368
MMAR402880
MMAR267377
MHYO295358
MHYO262722
MHYO262719
MHUN323259		MHUN_1785
MGEN243273
MFLO265311
MCAP340047
MART243272
MAEO419665
MACE188937			MA2989
LXYL281090		LXX11250
LSAK314315	LSA0694
LREU557436
LJOH257314
LINT363253
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LBRE387344
LACI272621
KRAD266940
IHOS453591
HWAL362976					HQ1783A
HSP64091
HSOM205914	HS_0175
HSAL478009
HDUC233412	HD_1929
HBUT415426
GFOR411154				GFO_2671
FNUC190304	FN0680
FNOD381764
FMAG334413					FMG_1052
FJOH376686				FJOH_4894
ERUM302409
ERUM254945
EFAE226185	EF_3118
ECHA205920	ECH_0082
ECAN269484
CTRA471473
CTRA471472
CTET212717	CTC_01227
CSUL444179
CPRO264201					PC0367
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161
CMAQ397948
CKOR374847
CHUT269798				CHU_3293
CFEL264202
CCAV227941
CBUR360115	COXBURSA331_A2074
CBOT536232	CLM_2802
CBOT515621	CLJ_B2732
CBOT508765	CLL_A1223
CBOT498213	CLD_2135
CBOT441772	CLI_2563
CBOT441771	CLC_2357
CBOT441770	CLB_2375
CBOT36826	CBO2502
CABO218497
BXEN266265	BXE_B2446
BTUR314724
BTRI382640	BT_1347
BQUI283165	BQ07440
BHER314723
BHEN283166	BH09680
BGAR290434
BBUR224326
BBAC360095	BARBAKC583_0856
BBAC264462
BAPH372461	BCC_351
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557			APE2551
AORE350688	CLOS_1436
AMAR234826
ALAI441768
AFUL224325

Organism features enriched in list (features available for 165 out of the 175 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Arrangment:Clusters	3.778e-6	14	17
Disease:Botulism	0.0017377	5	5
Disease:None	0.0012827	7	58
Disease:Pharyngitis	0.0000364	8	8
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever	0.0002894	9	11
Disease:Wide_range_of_infections	7.299e-7	11	11
Disease:bronchitis_and_pneumonitis	0.0000364	8	8
Disease:endocarditis	0.0062494	4	4
Endospores:No	2.027e-14	100	211
GC_Content_Range4:0-40	4.901e-26	116	213
GC_Content_Range4:40-60	0.0000371	43	224
GC_Content_Range4:60-100	7.427e-17	6	145
GC_Content_Range7:0-30	7.375e-12	35	47
GC_Content_Range7:30-40	9.989e-12	81	166
GC_Content_Range7:50-60	1.499e-7	10	107
GC_Content_Range7:60-70	5.074e-16	5	134
Genome_Size_Range5:0-2	1.127e-31	102	155
Genome_Size_Range5:4-6	6.216e-22	8	184
Genome_Size_Range5:6-10	0.0000156	2	47
Genome_Size_Range9:0-1	5.538e-9	22	27
Genome_Size_Range9:1-2	1.163e-20	80	128
Genome_Size_Range9:3-4	0.0010892	11	77
Genome_Size_Range9:4-5	3.401e-8	7	96
Genome_Size_Range9:5-6	4.414e-13	1	88
Genome_Size_Range9:6-8	0.0000322	1	38
Gram_Stain:Gram_Neg	3.982e-9	63	333
Gram_Stain:Gram_Pos	0.0004702	58	150
Habitat:Aquatic	0.0042846	16	91
Habitat:Host-associated	2.345e-12	95	206
Habitat:Multiple	0.0001567	33	178
Motility:No	0.0000706	61	151
Motility:Yes	4.967e-8	47	267
Optimal_temp.:-	0.0000857	53	257
Optimal_temp.:30-37	0.0005560	12	18
Optimal_temp.:37	0.0000965	46	106
Oxygen_Req:Aerobic	0.0000867	34	185
Oxygen_Req:Anaerobic	0.0007687	42	102
Pathogenic_in:Human	1.409e-6	85	213
Pathogenic_in:No	0.0004136	47	226
Pathogenic_in:Swine	0.0017377	5	5
Shape:Coccus	7.172e-9	46	82
Shape:Irregular_coccus	0.0013623	11	17
Shape:Rod	3.778e-10	65	347
Shape:Sphere	3.813e-7	16	19
Temp._range:Hyperthermophilic	0.0006986	14	23

ORGANISMS ENRICHED FOR GROUP:

Back to top

ORGANISMS DEPLETED FOR GROUP:

Back to top

PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group

Pathway or complex	# Orgs containing it	# of those orgs also containing candidate	Pearson Coeff
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)	365	280	0.5844
PWY-5340 (sulfate activation for sulfonation)	385	286	0.5632
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)	458	312	0.5321
PROSYN-PWY (proline biosynthesis I)	475	316	0.5150
PWY-4041 (γ-glutamyl cycle)	279	225	0.5134
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)	422	293	0.5008
SO4ASSIM-PWY (sulfate reduction I (assimilatory))	311	240	0.4997
GLUTATHIONESYN-PWY (glutathione biosynthesis)	339	254	0.4978
GLYCOCAT-PWY (glycogen degradation I)	246	202	0.4843
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))	383	271	0.4701
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))	289	222	0.4590
PWY-5918 (heme biosynthesis I)	272	212	0.4542
*PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)*	218	180	0.4465
PWY-5938 ((R)-acetoin biosynthesis I)	376	264	0.4457
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))	398	274	0.4440
PWY-6389 ((S)-acetoin biosynthesis)	368	259	0.4380
AST-PWY (arginine degradation II (AST pathway))	120	116	0.4351
TRPSYN-PWY (tryptophan biosynthesis)	525	323	0.4335
ARO-PWY (chorismate biosynthesis I)	510	318	0.4332
HISTSYN-PWY (histidine biosynthesis)	499	314	0.4321
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)	286	215	0.4243
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))	300	222	0.4212
PWY-5986 (ammonium transport)	361	253	0.4210
PWY-5386 (methylglyoxal degradation I)	305	224	0.4171
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))	505	314	0.4146
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)	249	193	0.4140
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)	249	193	0.4140
PWY-561 (superpathway of glyoxylate cycle)	162	141	0.4138
PWY-6317 (galactose degradation I (Leloir pathway))	464	298	0.4123
FAO-PWY (fatty acid β-oxidation I)	457	295	0.4114
ASPARAGINE-BIOSYNTHESIS (asparagine biosynthesis I)	356	249	0.4109
GLYOXYLATE-BYPASS (glyoxylate cycle)	169	145	0.4108
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)	195	161	0.4107
VALSYN-PWY (valine biosynthesis)	515	317	0.4103
CYSTSYN-PWY (cysteine biosynthesis I)	504	313	0.4094
THISYN-PWY (thiamin biosynthesis I)	502	312	0.4071
PWY-5194 (siroheme biosynthesis)	312	226	0.4064
GLUCONSUPER-PWY (D-gluconate degradation)	229	180	0.4035
PANTO-PWY (pantothenate biosynthesis I)	472	300	0.4032
PWY-3781 (aerobic respiration -- electron donor II)	405	271	0.4024

PAIRWISE GENOME CONTEXT SCORE MATRIX:

	EG11028	EG11027	EG11026	EG10682
M004	0.999177	0.998533	0.998559	0.999288
EG11028		0.999943	0.999928	0.999798
EG11027			0.999976	0.999856
EG11026				0.999727
EG10682

PAIRWISE BLAST SCORES:

	M004	EG11028	EG11027	EG11026	EG10682
M004	0.0f0	-	-	-	-
EG11028	-	0.0f0	-	-	-
EG11027	-	-	0.0f0	-	-
EG11026	-	-	-	0.0f0	-
EG10682	-	-	-	-	0.0f0

PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis) (degree of match pw to cand: 0.143, degree of match cand to pw: 0.600, average score: 0.694)
  Genes in pathway or complex:
             0.6445 0.4141 EG11234 (ydiB) EG11234-MONOMER (YdiB)
             0.2784 0.1267 EG10078 (aroF) AROF-MONOMER (AroF)
             0.6998 0.0846 EG10080 (aroH) AROH-MONOMER (AroH)
             0.5143 0.0983 EG10079 (aroG) AROG-MONOMER (AroG)
             0.9186 0.7811 EG10074 (aroB) AROB-MONOMER (3-dehydroquinate synthase)
             0.6664 0.2053 EG10076 (aroD) AROD-MONOMER (AroD)
             0.7780 0.4753 EG10077 (aroE) AROE-MONOMER (shikimate dehydrogenase)
             0.6996 0.1710 EG10081 (aroK) AROK-MONOMER (shikimate kinase I)
             0.7625 0.4014 EG10082 (aroL) AROL-MONOMER (shikimate kinase II)
             0.5741 0.0614 EG10073 (aroA) AROA-MONOMER (3-phosphoshikimate-1-carboxyvinyltransferase)
             0.2212 0.1114 EG10075 (aroC) AROC-MONOMER (AroC)
             0.8782 0.3962 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
             0.8610 0.3097 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
   *in cand* 0.9998 0.9992 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
   *in cand* 0.9997 0.9985 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
   *in cand* 0.9996 0.9986 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
             0.4872 0.2001 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.4004 0.0853 EG11039 (tyrA) CHORISMUTPREPHENDEHYDROG-MONOMER (TyrA)
             0.2188 0.0751 EG10707 (pheA) CHORISMUTPREPHENDEHYDRAT-MONOMER (PheA)
             0.3238 0.0043 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.2191 0.1077 EG11040 (tyrB) TYRB-MONOMER (TyrB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10682 (pabA) PABASYN-COMPII-MONOMER (PabA)
   *in cand* 0.9991 0.9985 M004 (rpe) RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)

- ALL-CHORISMATE-PWY (superpathway of chorismate) (degree of match pw to cand: 0.070, degree of match cand to pw: 0.800, average score: 0.580)
  Genes in pathway or complex:
             0.7335 0.2139 EG10799 (purN) GART-MONOMER (phosphoribosylglycinamide formyltransferase 1)
             0.7241 0.2212 EG11375 (folE) GTP-CYCLOHYDRO-I-MONOMER (GTP cyclohydrolase I monomer)
             0.5466 0.0906 EG11138 (nudB) H2NEOPTERINP3PYROPHOSPHOHYDRO-MONOMER (dihydroneopterin triphosphate pyrophosphohydrolase)
             0.9749 0.9476 EG11673 (folB) H2NEOPTERINALDOL-MONOMER (FolB)
             0.7251 0.4860 EG11374 (folK) H2PTERIDINEPYROPHOSPHOKIN-MONOMER (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase)
             0.7404 0.4107 G6862 (folM) G6862-MONOMER (dihydromonapterin reductase / dihydrofolate reductase)
             0.6788 0.4130 EG10326 (folA) DIHYDROFOLATEREDUCT-MONOMER (dihydrofolate reductase)
             0.4168 0.0640 EG10327 (folC) FOLC-MONOMER (bifunctional folypolyglutamate synthetase / dihydrofolate synthetase)
             0.0625 0.0001 EG10328 (folD) FOLD-MONOMER (FolD)
   *in cand* 0.9997 0.9993 EG10682 (pabA) PABASYN-COMPII-MONOMER (PabA)
             0.9932 0.9678 EG10683 (pabB) PABASYN-COMPI-MONOMER (PabB)
             0.5453 0.1578 EG50011 (folP) H2PTEROATESYNTH-MONOMER (FolP)
             0.6177 0.0005 EG11493 (pabC) ADCLY-MONOMER (pabC)
             0.4110 0.0440 EG11369 (ubiC) CHORPYRLY-MONOMER (chorismate lyase)
             0.6860 0.3503 EG11370 (ubiA) 4OHBENZOATE-OCTAPRENYLTRANSFER-MONOMER (4-hydroxybenzoate octaprenyltransferase)
             0.8955 0.8079 EG11044 (ubiX) UBIX-MONOMER (3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG)
             0.4062 0.0784 EG11396 (ubiD) EG11396-MONOMER (3-octaprenyl-4-hydroxybenzoate carboxy-lyase monomer)
             0.3492 0.0006 EG11476 (ubiB) 2-OCTAPRENYLPHENOL-HYDROX-MONOMER (2-octaprenylphenol hydroxylase)
             0.1793 0.0008 EG11143 (ubiG) DHHB-METHYLTRANSFER-MONOMER (UbiG)
             0.4804 0.1011 EG11324 (ubiH) OCTAPRENYL-METHOXYPHENOL-OH-MONOMER (2-octaprenyl-6-methoxyphenol hydroxylase)
             0.9811 0.9691 G6365 (ubiF) OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-MON (2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase)
             0.2191 0.1077 EG11040 (tyrB) TYRB-MONOMER (TyrB)
             0.3238 0.0043 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.2188 0.0751 EG10707 (pheA) CHORISMUTPREPHENDEHYDRAT-MONOMER (PheA)
             0.4004 0.0853 EG11039 (tyrA) CHORISMUTPREPHENDEHYDROG-MONOMER (TyrA)
             0.4872 0.2001 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9996 0.9986 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
   *in cand* 0.9997 0.9985 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
   *in cand* 0.9998 0.9992 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
             0.8610 0.3097 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
             0.8782 0.3962 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
             0.2212 0.1114 EG10075 (aroC) AROC-MONOMER (AroC)
             0.5741 0.0614 EG10073 (aroA) AROA-MONOMER (3-phosphoshikimate-1-carboxyvinyltransferase)
             0.7625 0.4014 EG10082 (aroL) AROL-MONOMER (shikimate kinase II)
             0.6996 0.1710 EG10081 (aroK) AROK-MONOMER (shikimate kinase I)
             0.7780 0.4753 EG10077 (aroE) AROE-MONOMER (shikimate dehydrogenase)
             0.6664 0.2053 EG10076 (aroD) AROD-MONOMER (AroD)
             0.9186 0.7811 EG10074 (aroB) AROB-MONOMER (3-dehydroquinate synthase)
             0.5143 0.0983 EG10079 (aroG) AROG-MONOMER (AroG)
             0.6998 0.0846 EG10080 (aroH) AROH-MONOMER (AroH)
             0.2784 0.1267 EG10078 (aroF) AROF-MONOMER (AroF)
             0.6445 0.4141 EG11234 (ydiB) EG11234-MONOMER (YdiB)
             0.9979 0.9939 EG10261 (entC) ENTC-MONOMER (isochorismate synthase 1)
             0.5458 0.2224 EG10259 (entA) ENTA-MONOMER (EntA)
             0.4551 0.1709 EG10263 (entE) ENTE-MONOMER (EntE)
             0.3256 0.1195 EG10264 (entF) ENTF-PANT (aryl carrier protein / serine activating enzyme)
             0.3982 0.1437 EG10262 (entD) ENTD-MONOMER (phosphopantetheinyl transferase)
             0.4857 0.1115 EG10260 (entB) ENTB-MONOMER (EntB)
             0.3506 0.1053 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
             0.6312 0.4526 EG11368 (menB) NAPHTHOATE-SYN-MONOMER (MenB)
             0.3277 0.1089 EG12438 (menH) EG12438-MONOMER ((1R,6R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase)
             0.4555 0.1764 EG10579 (menD) MEND-MONOMER (MenD)
             0.9948 0.9771 EG12362 (menF) MENF-MONOMER (MenF)
             0.3927 0.2186 EG11532 (menC) O-SUCCINYLBENZOATE-COA-SYN-MONOMER (o-succinylbenzoate synthase)
             0.5257 0.1744 EG12437 (menE) O-SUCCINYLBENZOATE-COA-LIG-MONOMER (MenE)
             0.5197 0.2435 EG11880 (menA) DMK-MONOMER (1,4-dihydroxy-2-naphthoate octaprenyltransferase)
             0.5837 0.1756 EG11473 (ubiE) 2-OCTAPRENYL-METHOXY-BENZOQ-METH-MONOMER (bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9985 M004 (rpe) RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)
   This pathway has holes

- ANTHRANSYN-CPLX (anthranilate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.400, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9985 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
   *in cand* 0.9998 0.9992 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10682 (pabA) PABASYN-COMPII-MONOMER (PabA)
   *in cand* 0.9996 0.9986 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
   *in cand* 0.9991 0.9985 M004 (rpe) RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)

- TRPSYN-PWY (tryptophan biosynthesis) (degree of match pw to cand: 0.600, degree of match cand to pw: 0.600, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9986 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
   *in cand* 0.9997 0.9985 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
   *in cand* 0.9998 0.9992 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
             0.8610 0.3097 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
             0.8782 0.3962 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10682 (pabA) PABASYN-COMPII-MONOMER (PabA)
   *in cand* 0.9991 0.9985 M004 (rpe) RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)

Back to top

GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11026 EG11027 EG11028 (centered at EG11027)
M004 (centered at M004)
EG10682 (centered at EG10682)

ORG:REPLICON:CIRC?\GENE	IN REF LIST	M004	EG11028	EG11027	EG11026	EG10682
		403/623	390/623	362/623	409/623	371/623
AAEO224324:0:T	yes	541	279	0	1122	254
AAUR290340:2:T	yes	1750	1760	-	-	0
AAVE397945:0:T	yes	0	4	144	145	142
ABAC204669:0:T	yes	0	4081	3839	1093	4086
ABAU360910:0:T	yes	83	85	1	0	2
ABOR393595:0:T	yes	18	3	1	0	2
ABUT367737:0:T	yes	-	-	-	0	1152
ACAU438753:0:T	yes	0	402	400	399	401
ACEL351607:0:T	yes	1254	1049	-	-	0
ACRY349163:8:T	yes	0	405	404	403	404
ADEH290397:0:T	yes	0	81	83	84	82
AEHR187272:0:T	yes	585	3	1	0	2
AFER243159:0:T	yes	0	2	4	5	3
AHYD196024:0:T	yes	249	0	2	3	245
AMAR329726:9:T	yes	0	3714	1519	2938	33
AMET293826:0:T	yes	1659	0	2	3	1047
ANAE240017:0:T	yes	-	3	1	0	-
AORE350688:0:T	yes	0	-	-	-	-
APER272557:0:T	yes	-	-	0	-	-
APLE416269:0:T	yes	1002	303	305	0	-
APLE434271:0:T	no	1033	317	319	0	-
ASAL382245:5:T	yes	0	268	266	265	4
ASP1667:3:T	yes	1683	1694	-	-	0
ASP232721:2:T	yes	0	5	8	9	7
ASP62928:0:T	yes	5	3	1	0	2
ASP62977:0:T	yes	361	0	2022	2023	2021
ASP76114:2:T	yes	0	2	16	17	15
AVAR240292:3:T	yes	2755	2801	2485	0	856
BABO262698:1:T	no	0	-	265	266	-
BAMB339670:3:T	no	5	3	1	0	2
BAMB398577:3:T	no	5	3	1	0	2
BAMY326423:0:T	yes	1472	1994	-	1992	0
BANT260799:0:T	no	3688	0	1155	1156	1
BANT261594:2:T	no	3593	1085	1087	1088	0
BANT568206:2:T	yes	488	3172	3170	3169	0
BANT592021:2:T	no	3810	1138	1140	1141	0
BAPH198804:0:T	yes	249	-	1	0	-
BAPH372461:0:T	yes	0	-	-	-	-
BBAC360095:0:T	yes	0	-	-	-	-
BBRO257310:0:T	yes	0	2	4	5	3
BCAN483179:1:T	no	0	-	288	289	-
BCEN331271:2:T	no	0	2	4	5	3
BCEN331272:3:T	yes	5	3	1	0	2
BCER226900:1:T	yes	3704	1138	1140	1141	0
BCER288681:0:T	no	3609	0	1139	-	1
BCER315749:1:T	yes	2309	0	-	-	1
BCER405917:1:T	yes	3624	1230	1232	-	0
BCER572264:1:T	no	3718	1065	1067	-	0
BCIC186490:0:T	yes	0	-	-	-	481
BCLA66692:0:T	yes	2255	1837	1838	1839	0
BFRA272559:1:T	yes	-	-	-	2	0
BFRA295405:0:T	no	-	-	-	2	0
BHAL272558:0:T	yes	2485	1642	-	1644	0
BHEN283166:0:T	yes	0	-	-	-	-
BJAP224911:0:F	yes	500	-	2729	2730	0
BLIC279010:0:T	yes	1658	2252	-	-	0
BLON206672:0:T	yes	-	101	-	167	0
BMAL243160:0:T	no	5	3	1	0	2
BMAL320388:0:T	no	0	2	4	5	3
BMAL320389:0:T	yes	0	2	4	5	3
BMEL224914:1:T	no	281	-	1	0	-
BMEL359391:1:T	no	0	-	257	258	-
BOVI236:1:T	yes	0	-	235	236	-
BPAR257311:0:T	no	0	2	4	5	3
BPER257313:0:T	yes	5	3	1	0	2
BPET94624:0:T	yes	5	3	1	0	2
BPSE272560:1:T	yes	0	2	4	5	3
BPSE320372:1:T	no	0	2	4	5	3
BPSE320373:1:T	no	0	2	4	5	3
BPUM315750:0:T	yes	1456	1966	1965	1964	0
BQUI283165:0:T	yes	0	-	-	-	-
BSP107806:0:T	yes	-	0	-	-	-
BSP107806:2:T	yes	255	-	1	0	-
BSP36773:2:T	yes	5	3	1	0	2
BSP376:0:T	yes	0	-	1212	1213	-
BSUB:0:T	yes	1636	2352	-	-	0
BSUI204722:1:T	yes	0	-	283	284	-
BSUI470137:1:T	no	0	-	292	293	-
BTHA271848:1:T	no	0	2	4	5	3
BTHE226186:0:T	yes	-	-	-	0	2
BTHU281309:1:T	no	3499	0	1052	-	1
BTHU412694:1:T	no	3309	1034	1036	-	0
BTRI382640:1:T	yes	0	-	-	-	-
BVIE269482:7:T	yes	5	3	1	0	2
BWEI315730:4:T	yes	3624	1161	1163	-	0
BXEN266265:1:T	yes	0	-	-	-	-
CACE272562:1:T	yes	0	1440	1438	1437	1439
CAULO:0:T	yes	0	1816	1819	1820	1818
CBEI290402:0:T	yes	0	586	588	-	587
CBLO203907:0:T	yes	143	0	2	3	141
CBLO291272:0:T	no	149	0	2	3	147
CBOT36826:1:T	no	0	-	-	-	-
CBOT441770:0:T	yes	0	-	-	-	-
CBOT441771:0:T	no	0	-	-	-	-
CBOT441772:1:T	no	0	-	-	-	-
CBOT498213:1:T	no	0	-	-	-	-
CBOT508765:1:T	yes	0	-	-	-	-
CBOT515621:2:T	yes	0	-	-	-	-
CBOT536232:0:T	no	0	-	-	-	-
CBUR227377:1:T	yes	699	0	-	-	698
CBUR360115:1:T	no	0	-	-	-	-
CBUR434922:2:T	no	1	1096	-	-	0
CCHL340177:0:T	yes	1	326	-	0	123
CCON360104:2:T	yes	517	-	0	483	-
CCUR360105:0:T	yes	167	-	536	0	-
CDES477974:0:T	yes	406	3	1	0	2
CDIF272563:1:T	yes	1145	-	-	-	0
CDIP257309:0:T	yes	-	0	2	3	-
CEFF196164:0:F	yes	0	1186	1188	1189	-
CFET360106:0:T	yes	491	-	0	271	0
CGLU196627:0:T	yes	-	0	2	3	-
CHOM360107:1:T	yes	0	-	-	547	-
CHUT269798:0:T	yes	-	-	-	0	-
CHYD246194:0:T	yes	-	3	1	0	2
CJAP155077:0:T	yes	6	3	1	0	2
CJEI306537:0:T	yes	224	0	-	2	-
CJEJ192222:0:T	yes	106	-	0	159	-
CJEJ195099:0:T	no	105	-	0	208	-
CJEJ354242:2:T	yes	100	-	0	136	-
CJEJ360109:0:T	yes	46	-	156	0	-
CJEJ407148:0:T	no	106	-	0	148	-
CKLU431943:1:T	yes	103	0	2	3	1
CMET456442:0:T	yes	-	2	0	-	1
CMIC31964:2:T	yes	1934	1929	-	-	0
CMIC443906:2:T	yes	6	0	-	-	-
CNOV386415:0:T	yes	0	-	-	-	562
CPEL335992:0:T	yes	0	611	-	608	610
CPER195102:1:T	yes	721	-	-	-	0
CPER195103:0:T	no	706	1	-	-	0
CPER289380:3:T	yes	606	-	-	-	0
CPHY357809:0:T	yes	0	1354	1352	1351	1353
CPRO264201:0:F	yes	-	-	-	-	0
CPSY167879:0:T	yes	0	2960	2962	2963	151
CRUT413404:0:T	yes	901	643	0	666	764
CSAL290398:0:T	yes	9	4	1	0	2
CSP501479:8:F	yes	0	968	1054	1056	1053
CSP78:2:T	yes	2037	0	6	7	5
CTEP194439:0:T	yes	-	0	-	221	115
CTET212717:0:T	yes	0	-	-	-	-
CVES412965:0:T	yes	818	595	0	613	691
CVIO243365:0:T	yes	9	6	0	543	2
DARO159087:0:T	yes	8	6	1	0	2
DDES207559:0:T	yes	0	864	862	-	-
DETH243164:0:T	yes	-	0	-	3	1
DGEO319795:1:T	yes	-	0	3	-	2
DHAF138119:0:T	yes	0	523	520	-	600
DNOD246195:0:T	yes	0	-	-	45	563
DOLE96561:0:T	yes	673	3	1	0	2
DPSY177439:2:T	yes	0	847	849	850	848
DRAD243230:3:T	yes	-	25	1	-	0
DRED349161:0:T	yes	1477	0	2	3	1
DSHI398580:5:T	yes	1222	0	3	4	2
DSP216389:0:T	yes	-	0	-	3	1
DSP255470:0:T	no	-	0	-	3	1
DVUL882:1:T	yes	2051	-	0	-	-
ECAR218491:0:T	yes	1833	0	2	3	1810
ECHA205920:0:T	yes	0	-	-	-	-
ECOL199310:0:T	no	2388	1	0	-	2367
ECOL316407:0:T	no	2622	2	1	0	2647
ECOL331111:6:T	no	2303	3	1	0	2277
ECOL362663:0:T	no	2162	2	1	0	2142
ECOL364106:1:T	no	2342	2	1	0	2321
ECOL405955:2:T	yes	2174	2	1	0	2156
ECOL409438:6:T	yes	2378	2	1	0	2353
ECOL413997:0:T	no	2015	2	1	0	1989
ECOL439855:4:T	no	1730	0	1	2	1710
ECOL469008:0:T	no	0	1993	1994	1995	26
ECOL481805:0:T	no	0	2040	2041	2042	25
ECOL585034:0:T	no	2210	2	1	0	2185
ECOL585035:0:T	no	2289	2	1	0	2269
ECOL585055:0:T	no	2336	2	1	0	2311
ECOL585056:2:T	no	2283	2	1	0	2263
ECOL585057:0:T	no	2261	2	1	0	2241
ECOL585397:0:T	no	2502	2	1	0	2482
ECOL83334:0:T	no	2456	2	1	0	2439
ECOLI:0:T	no	2169	2	1	0	2144
ECOO157:0:T	no	2053	0	2	3	2035
EFAE226185:3:T	yes	0	-	-	-	-
EFER585054:1:T	yes	1660	0	1	2	1641
ELIT314225:0:T	yes	1226	0	-	6	4
ESP42895:1:T	yes	1609	0	1	2	1598
FALN326424:0:T	yes	-	3	-	0	1731
FJOH376686:0:T	yes	-	-	-	0	-
FMAG334413:1:T	yes	-	-	-	-	0
FNUC190304:0:T	yes	0	-	-	-	-
FPHI484022:1:T	yes	662	5	3	0	-
FRANT:0:T	no	0	934	-	929	-
FSP106370:0:T	yes	-	3	-	0	1434
FSP1855:0:T	yes	-	1788	-	1791	0
FSUC59374:0:T	yes	1439	-	0	-	0
FTUL351581:0:T	no	0	468	-	462	-
FTUL393011:0:T	no	0	401	399	394	-
FTUL393115:0:T	yes	0	913	-	908	-
FTUL401614:0:T	yes	0	551	549	543	-
FTUL418136:0:T	no	0	1179	1177	1171	-
FTUL458234:0:T	no	0	420	418	412	-
GBET391165:0:T	yes	1322	5	1	0	2
GFOR411154:0:T	yes	-	-	-	0	-
GKAU235909:1:T	yes	1175	2221	2220	2219	0
GMET269799:1:T	yes	0	2439	-	2436	2438
GOXY290633:5:T	yes	0	931	-	933	-
GSUL243231:0:T	yes	988	3	1	0	2
GTHE420246:1:T	yes	953	2036	2035	2034	0
GURA351605:0:T	yes	0	1533	-	1536	1534
GVIO251221:0:T	yes	2700	846	1936	1694	0
HACI382638:1:T	yes	-	3	1	0	-
HARS204773:0:T	yes	5	3	1	0	2
HAUR316274:2:T	yes	1709	2382	2107	2410	0
HCHE349521:0:T	yes	0	13	15	16	14
HDUC233412:0:T	yes	0	-	-	-	-
HHAL349124:0:T	yes	0	1037	1035	1034	1036
HHEP235279:0:T	yes	1062	1	0	-	0
HINF281310:0:T	yes	0	957	954	953	-
HINF374930:0:T	yes	0	768	770	771	-
HINF71421:0:T	no	0	802	805	806	-
HMAR272569:7:T	yes	-	-	-	-	0
HMAR272569:8:T	yes	-	-	0	-	-
HMOD498761:0:T	yes	224	0	2	-	1
HMUK485914:1:T	yes	-	1	3	-	0
HNEP81032:0:T	yes	1554	3	1	0	2
HPY:0:T	no	-	2	1	0	-
HPYL357544:1:T	yes	-	0	2	3	-
HPYL85963:0:T	no	-	3	1	0	-
HSOM205914:1:T	yes	0	-	-	-	-
HSOM228400:0:T	no	0	1292	1290	1289	-
HWAL362976:1:T	yes	-	-	-	-	0
ILOI283942:0:T	yes	596	0	2	3	593
JSP290400:1:T	yes	0	1100	1097	1095	1098
JSP375286:0:T	yes	5	3	1	0	2
KPNE272620:2:T	yes	2785	2	1	0	2773
LBIF355278:2:T	yes	-	-	-	1113	0
LBIF456481:2:T	no	-	-	-	1151	0
LBOR355276:1:T	yes	-	0	-	1887	1
LBOR355277:1:T	no	-	1835	-	0	1834
LCAS321967:1:T	yes	1500	-	1	0	-
LCHO395495:0:T	yes	23	21	1	0	2
LINN272626:1:T	no	287	3	1	0	1274
LINT189518:1:T	yes	-	2810	-	0	2811
LINT267671:1:T	no	-	1	-	2162	0
LLAC272622:5:T	yes	604	2	0	-	-
LLAC272623:0:T	yes	609	155	153	-	0
LMES203120:1:T	yes	332	0	4	3	-
LMON169963:0:T	no	215	2	0	-	1176
LMON265669:0:T	yes	189	2	0	-	1074
LPLA220668:0:T	yes	-	-	0	1	-
LPNE272624:0:T	no	0	-	170	169	171
LPNE297245:1:F	no	0	-	162	161	163
LPNE297246:1:F	yes	0	-	166	165	167
LPNE400673:0:T	no	164	-	1	2	0
LSAK314315:0:T	yes	0	-	-	-	-
LSPH444177:1:T	yes	1421	3438	-	3715	0
LWEL386043:0:T	yes	191	3	1	0	1051
LXYL281090:0:T	yes	-	0	-	-	-
MABS561007:1:T	yes	2789	2628	-	2626	0
MACE188937:0:T	yes	-	-	0	-	-
MAER449447:0:T	yes	3874	0	-	2191	4
MAQU351348:2:T	yes	0	2	4	5	3
MAVI243243:0:T	yes	3308	3116	-	3114	0
MBAR269797:1:T	yes	-	2	0	-	-
MBOV233413:0:T	no	1445	1638	-	1640	0
MBOV410289:0:T	no	1435	1613	-	1615	0
MBUR259564:0:T	yes	-	2	0	-	-
MCAP243233:0:T	yes	0	2	4	5	3
MEXT419610:0:T	yes	0	3688	3691	3692	2923
MFLA265072:0:T	yes	7	6	2	0	3
MGIL350054:3:T	yes	2943	2819	-	2817	0
MHUN323259:0:T	yes	-	0	-	-	-
MJAN243232:2:T	yes	-	861	0	706	4
MKAN190192:0:T	yes	-	1	-	962	0
MLAB410358:0:T	yes	-	3	1	0	2
MLEP272631:0:T	yes	341	798	-	800	0
MLOT266835:2:T	yes	3207	-	0	1	-
MMAG342108:0:T	yes	0	434	1483	1484	1482
MMAR368407:0:T	yes	-	0	2	-	1
MMAR394221:0:T	yes	1515	4	1	0	2
MMAZ192952:0:T	yes	-	-	0	-	-
MPET420662:1:T	yes	6	3	1	0	2
MSED399549:0:T	yes	-	0	-	-	-
MSME246196:0:T	yes	3016	3167	-	3169	0
MSP164756:1:T	no	2373	3045	-	3043	0
MSP164757:0:T	no	2398	3042	-	3040	0
MSP189918:2:T	yes	2403	3085	-	3083	0
MSP266779:3:T	yes	0	-	1650	1651	-
MSP400668:0:T	yes	0	-	5	6	4
MSP409:2:T	yes	5168	5137	5134	5133	0
MSTA339860:0:T	yes	-	0	-	-	-
MSUC221988:0:T	yes	1215	0	2	3	-
MTBCDC:0:T	no	1499	1695	-	1697	0
MTBRV:0:T	no	1411	1612	-	1614	0
MTHE187420:0:T	yes	-	0	6	-	1
MTHE264732:0:T	yes	0	424	422	421	423
MTHE349307:0:T	yes	-	-	0	-	-
MTUB336982:0:T	no	1424	1612	-	1614	0
MTUB419947:0:T	yes	1447	1652	-	1654	0
MVAN350058:0:T	yes	2639	2764	-	2766	0
MXAN246197:0:T	yes	4547	4331	4321	-	0
NARO279238:0:T	yes	0	1944	1946	1947	1945
NEUR228410:0:T	yes	2175	2177	1	0	2
NEUT335283:2:T	yes	1937	1939	0	-	1
NFAR247156:2:T	yes	-	1819	-	1821	0
NGON242231:0:T	yes	0	100	389	869	390
NHAM323097:2:T	yes	871	-	1	0	-
NMEN122586:0:T	no	935	723	673	0	672
NMEN122587:0:T	yes	220	74	1	1005	0
NMEN272831:0:T	no	786	673	620	0	619
NMEN374833:0:T	no	213	55	1	946	0
NMUL323848:3:T	yes	2	0	194	193	195
NOCE323261:1:T	yes	0	2	4	5	3
NPHA348780:2:T	yes	-	0	-	-	1
NSP103690:6:T	yes	515	59	889	4520	0
NSP35761:1:T	yes	-	-	-	0	-
NSP387092:0:T	yes	0	874	-	684	338
NWIN323098:0:T	yes	383	-	0	1	-
OANT439375:5:T	yes	334	-	1	0	-
OCAR504832:0:T	yes	0	-	840	841	-
OIHE221109:0:T	yes	1020	3	1	0	193
PABY272844:0:T	yes	-	-	0	-	-
PACN267747:0:T	yes	-	-	-	0	-
PAER178306:0:T	yes	-	-	0	-	-
PAER208963:0:T	yes	0	3524	40	41	39
PAER208964:0:T	no	0	406	43	44	42
PARC259536:0:T	yes	752	-	1	0	2
PARS340102:0:T	yes	-	-	0	-	-
PATL342610:0:T	yes	6	2190	2192	2193	0
PCAR338963:0:T	yes	0	501	503	504	502
PCRY335284:1:T	yes	551	-	1	2	0
PDIS435591:0:T	yes	-	-	-	0	2
PENT384676:0:T	yes	0	2	6	7	5
PFLU205922:0:T	yes	7	5	-	0	2
PFLU216595:1:T	yes	5	3	-	0	2
PFLU220664:0:T	yes	10	8	-	0	2
PFUR186497:0:T	yes	-	-	0	-	-
PHAL326442:1:T	yes	2556	1126	1124	1123	0
PING357804:0:T	yes	0	868	866	865	3267
PINT246198:1:T	yes	-	-	-	-	0
PISL384616:0:T	yes	-	-	2	-	0
PLUM243265:0:F	yes	0	2428	2430	2431	307
PLUT319225:0:T	yes	1259	1083	-	1260	0
PMAR146891:0:T	yes	-	-	704	1291	0
PMAR167539:0:T	yes	-	1558	553	1187	0
PMAR167540:0:T	yes	-	-	786	1138	0
PMAR167542:0:T	yes	-	-	0	437	-
PMAR167546:0:T	yes	-	-	0	576	-
PMAR167555:0:T	yes	-	1791	679	1475	0
PMAR59920:0:T	no	-	907	0	613	1316
PMAR74546:0:T	yes	-	1516	-	1230	0
PMAR74547:0:T	yes	236	1397	321	0	1761
PMAR93060:0:T	yes	-	-	751	1343	0
PMEN399739:0:T	yes	55	53	1	0	2
PMOB403833:0:T	yes	-	-	1	0	2
PMUL272843:1:T	yes	1039	4	1	0	-
PNAP365044:8:T	yes	11	5	1	0	3
PPRO298386:2:T	yes	0	2194	2196	2197	4
PPUT160488:0:T	no	0	2	6	7	5
PPUT351746:0:T	yes	0	2	5	6	4
PPUT76869:0:T	no	0	2	5	6	4
PRUM264731:0:T	yes	-	-	-	-	0
PSP117:0:T	yes	-	4262	0	5400	3303
PSP296591:2:T	yes	15	6	1	0	4
PSP312153:0:T	yes	4	3	1	0	2
PSP56811:2:T	yes	0	-	1070	1071	1069
PSTU379731:0:T	yes	0	2	4	5	3
PSYR205918:0:T	yes	3880	3878	3849	0	3850
PSYR223283:2:T	yes	0	2	-	28	26
PTHE370438:0:T	yes	154	3	1	0	2
RALB246199:0:T	yes	-	2	1	0	1
RCAS383372:0:T	yes	-	3	0	699	2
RDEN375451:4:T	yes	0	1973	1978	1980	1977
RETL347834:5:T	yes	95	-	0	1	-
REUT264198:3:T	yes	0	2	4	5	3
REUT381666:2:T	yes	0	2	4	5	3
RFER338969:1:T	yes	0	3075	3070	3069	3073
RLEG216596:6:T	yes	106	-	0	1	-
RMET266264:2:T	yes	0	2	4	5	3
RPAL258594:0:T	yes	936	-	0	1	-
RPAL316055:0:T	yes	0	-	938	937	-
RPAL316056:0:T	yes	0	-	848	847	-
RPAL316057:0:T	yes	0	-	1065	1066	-
RPAL316058:0:T	yes	894	-	0	1	-
RPOM246200:1:T	yes	0	1341	1345	1346	1344
RRUB269796:1:T	yes	511	0	5	6	4
RSAL288705:0:T	yes	17	3	-	0	560
RSOL267608:0:T	yes	-	-	1	0	-
RSOL267608:1:T	yes	0	2	-	-	3
RSP101510:3:F	yes	6138	2	-	0	2674
RSP357808:0:T	yes	517	196	193	0	195
RSPH272943:4:T	yes	806	4	1	0	2
RSPH349101:2:T	no	724	4	1	0	2
RSPH349102:5:T	yes	0	1579	1576	1575	1577
RXYL266117:0:T	yes	0	748	728	727	729
SACI330779:0:T	yes	-	0	-	-	-
SACI56780:0:T	yes	836	3	1	0	2
SALA317655:1:T	yes	2320	341	-	0	2
SARE391037:0:T	yes	1785	3246	-	3243	0
SAUR158878:1:T	no	-	-	-	0	-
SAUR158879:1:T	no	-	-	-	0	-
SAUR196620:0:T	no	-	-	-	0	-
SAUR273036:0:T	no	-	-	-	0	-
SAUR282458:0:T	no	-	-	-	0	-
SAUR282459:0:T	no	-	-	-	0	-
SAUR359786:1:T	no	-	-	-	0	-
SAUR359787:1:T	no	-	-	-	0	-
SAUR367830:3:T	no	-	-	-	0	-
SAUR418127:0:T	yes	-	-	-	0	-
SAUR426430:0:T	no	-	-	-	0	-
SAUR93061:0:F	no	-	-	-	0	-
SAUR93062:1:T	no	-	-	-	0	-
SAVE227882:1:F	yes	2586	1865	-	1869	0
SBAL399599:3:T	yes	1435	0	2	3	1113
SBAL402882:1:T	no	1391	0	2	3	1065
SBOY300268:1:T	yes	1490	0	1	2	1460
SCO:2:F	yes	0	590	1773	1772	2417
SDEG203122:0:T	yes	0	1	7	8	6
SDEN318161:0:T	yes	0	2231	2233	2234	2997
SDYS300267:1:T	yes	2211	2	1	0	2053
SELO269084:0:T	yes	577	191	1661	0	781
SENT209261:0:T	no	2290	0	1	2	2302
SENT220341:0:T	no	2718	1	0	-	2730
SENT295319:0:T	no	2111	2	1	0	2099
SENT321314:2:T	no	1727	0	1	2	1715
SENT454169:2:T	no	1796	0	1	2	1781
SEPI176279:1:T	yes	-	0	-	3	-
SEPI176280:0:T	no	-	0	-	3	-
SERY405948:0:T	yes	-	5590	-	-	0
SFLE198214:0:T	yes	2044	2	1	0	2020
SFLE373384:0:T	no	2001	2	1	0	1977
SFUM335543:0:T	yes	175	2	0	-	1
SGLO343509:3:T	yes	926	3	1	0	923
SGOR29390:0:T	yes	0	444	446	-	-
SHAE279808:0:T	yes	-	-	-	0	-
SHAL458817:0:T	yes	2479	3	1	0	2003
SHIGELLA:0:T	no	2636	2	1	0	2660
SLAC55218:1:F	yes	0	2399	2396	2395	2397
SLOI323850:0:T	yes	0	2093	2095	2096	366
SMED366394:2:T	yes	0	-	-	-	-
SMED366394:3:T	yes	-	-	0	1	-
SMEL266834:1:T	yes	0	-	-	-	-
SMEL266834:2:T	yes	-	-	0	1	-
SMUT210007:0:T	yes	-	0	2	3	-
SONE211586:1:T	yes	0	2687	2689	2690	316
SPEA398579:0:T	no	0	1404	1402	1401	3401
SPNE1313:0:T	yes	-	3	1	0	-
SPNE170187:0:T	yes	225	3	1	0	-
SPNE171101:0:T	no	186	3	1	0	-
SPNE487213:0:T	no	188	3	1	0	-
SPNE487214:0:T	no	-	3	1	0	-
SPNE488221:0:T	no	154	3	1	0	-
SPRO399741:1:T	yes	1960	0	2	3	1942
SRUB309807:1:T	yes	0	1620	-	1625	1623
SSAP342451:2:T	yes	-	0	-	-	-
SSED425104:0:T	yes	3564	901	899	898	0
SSOL273057:0:T	yes	-	0	-	-	1
SSON300269:1:T	yes	1564	0	1	2	1540
SSP1131:0:T	yes	852	0	751	480	2038
SSP1148:0:T	yes	1466	0	986	2824	2233
SSP292414:1:T	yes	0	-	-	-	-
SSP292414:2:T	yes	-	5	2	0	3
SSP321327:0:T	yes	0	1959	521	2179	2451
SSP321332:0:T	yes	1954	479	0	2242	2314
SSP387093:0:T	yes	-	0	-	1228	69
SSP644076:4:F	yes	0	-	-	-	-
SSP644076:5:F	yes	-	6	2	0	3
SSP64471:0:T	yes	1196	0	1151	276	2159
SSP84588:0:T	yes	90	1043	0	608	1320
SSP94122:1:T	yes	3362	948	946	945	0
STHE264199:0:T	yes	-	0	-	-	-
STHE292459:0:T	yes	0	52	54	57	53
STHE299768:0:T	no	-	0	-	-	-
STHE322159:2:T	yes	-	0	-	-	-
STOK273063:0:T	yes	-	0	-	-	-
STRO369723:0:T	yes	1826	3107	-	3104	0
STYP99287:1:T	yes	1752	0	1	2	1738
SWOL335541:0:T	yes	833	-	-	0	-
TCRU317025:0:T	yes	0	2	4	5	3
TDEN292415:0:T	yes	8	6	1	0	2
TDEN326298:0:T	yes	-	729	-	170	0
TELO197221:0:T	yes	1701	985	-	0	782
TERY203124:0:T	yes	269	1306	0	765	2409
TFUS269800:0:T	yes	0	-	-	-	-
TKOD69014:0:T	yes	-	1	0	-	-
TMAR243274:0:T	yes	-	1	0	-	0
TPET390874:0:T	no	-	0	1	-	1
TPSE340099:0:T	yes	421	0	2	3	1
TROS309801:1:T	yes	496	0	2	3	1
TSP1755:0:T	yes	0	116	114	113	115
TSP28240:0:T	yes	-	0	1	-	1
TTEN273068:0:T	yes	0	75	73	72	74
TTHE262724:1:T	yes	428	2	0	-	1
TTHE300852:2:T	yes	0	1781	1779	1088	1780
TTUR377629:0:T	yes	9	8	1	0	2
UMET351160:0:T	yes	-	0	1	-	1
VCHO:0:T	yes	1470	3	1	0	1464
VCHO345073:1:T	no	1375	3	1	0	1369
VEIS391735:1:T	yes	0	623	621	620	622
VFIS312309:2:T	yes	1290	4	3	0	1287
VPAR223926:1:T	yes	824	0	2	3	881
VVUL196600:2:T	yes	1816	3	1	0	1886
VVUL216895:1:T	no	69	1657	1659	1660	0
WPIP955:0:T	yes	0	-	-	-	-
WSUC273121:0:T	yes	121	0	-	1664	1906
XAUT78245:1:T	yes	0	2477	2475	2474	2476
XAXO190486:0:T	yes	0	3	7	8	5
XCAM190485:0:T	yes	0	3	13	14	11
XCAM314565:0:T	no	0	3	13	14	11
XCAM316273:0:T	no	9	6	1	0	3
XCAM487884:0:T	no	0	3	8	9	6
XFAS160492:2:T	no	0	2	4	5	3
XFAS183190:1:T	yes	0	2	4	5	3
XFAS405440:0:T	no	0	2	4	5	3
XORY291331:0:T	no	3	0	114	113	116
XORY342109:0:T	yes	3	0	114	113	116
XORY360094:0:T	no	356	362	6	8	0
YENT393305:1:T	yes	1728	0	2	3	1715
YPES187410:5:T	no	1905	1	-	0	1920
YPES214092:3:T	no	0	1972	1970	1969	14
YPES349746:2:T	no	1380	0	2	3	1362
YPES360102:3:T	yes	1767	3	1	0	1753
YPES377628:2:T	no	2272	3	1	0	2257
YPES386656:2:T	no	0	831	833	834	13
YPSE273123:2:T	no	1616	3	1	0	1602
YPSE349747:2:T	no	2005	0	2	3	1991
ZMOB264203:0:T	yes	0	457	-	536	185