CANDIDATE ID: 655

CANDIDATE ID: 655

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9917890e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11837 (typA) (bipA)
   Products of gene:
     - EG11837-MONOMER (protein possibly involved in ribosome structure or function)

- EG11835 (yihI) (b3866)
   Products of gene:
     - EG11835-MONOMER (GAP-like protein that activates GTPase activity of Der)
       Regulatees:
     - CPLX0-7853 (GAP-like protein that activates GTPase activity of Der)

- EG10387 (glnL) (b3869)
   Products of gene:
     - PROTEIN-NRIIP (NtrB-P)
     - PROTEIN-NRII (NtrB)
       Regulatees:
     - GLNL-CPLX (NtrB)

- EG10385 (glnG) (b3868)
   Products of gene:
     - PROTEIN-NRI (NtrC transcriptional dual regulator)
     - PROTEIN-NRIP (NtrC-Phosphorylated transcriptional dual regulator)
       Regulatees:
        TU0-1003 (astCADBE)
        TU00322 (potFGHI)
        TU0-3341 (ygjG)
        TU0-3623 (ddpXABCDF)
        TU0-3622 (yhdWXYZ)
        TU0-3621 (yeaGH)
        TU0-3581 (argT-hisJQMP)
        TU0-3645 (rutABCDEFG)
        TU0-1342 (cbl)
        TU0-5903 (glnA)
        TU00029 (glnALG)
        TU00172 (glnHPQ)
        TU65 (nac)
        TU587 (glnK-amtB)
        TU00028 (glnLG)
        TU0-5901 (glnA)
        TU00027 (glnALG)
     - GLNG-CPLX (NtrC transcriptional dual regulator)

- EG10383 (glnA) (b3870)
   Products of gene:
     - GLUTAMINESYN-MONOMER (GlnA)
     - ADENYLYL-GS (adenylyl-[glutamine synthetase])
     - GLUTAMINESYN-OLIGOMER (glutamine synthetase)
       Reactions:
        ammonia + L-glutamate + ATP  ->  L-glutamine + ADP + phosphate + H+
         In pathways
         AMMASSIM-PWY (superpathway of glutamate biosynthesis)
         PWY-5505 (PWY-5505)
         PWY-3282 (PWY-3282)
         GLNSYN-PWY (glutamine biosynthesis I)
         PWY490-3 (PWY490-3)
         PWY-381 (PWY-381)
         PWY-5675 (PWY-5675)
         PWY-6549 (PWY-6549)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 189
Effective number of orgs (counting one per cluster within 468 clusters): 131

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79014
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
SSP94122 ncbi Shewanella sp. ANA-35
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-45
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SALA317655 ncbi Sphingopyxis alaskensis RB22564
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NHAM323097 ncbi Nitrobacter hamburgensis X144
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
LCHO395495 ncbi Leptothrix cholodnii SP-64
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HHAL349124 ncbi Halorhodospira halophila SL14
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf44
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GMET269799 ncbi Geobacter metallireducens GS-154
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DRED349161 ncbi Desulfotomaculum reducens MI-14
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CJAP155077 Cellvibrio japonicus4
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI204722 ncbi Brucella suis 13304
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  EG11837   EG11835   EG10387   EG10385   EG10383   
YPSE349747 YPSIP31758_0028YPSIP31758_0023YPSIP31758_0026YPSIP31758_0025YPSIP31758_0027
YPSE273123 YPTB0025YPTB0020YPTB0023YPTB0022YPTB0024
YPES386656 YPDSF_3879YPDSF_3884YPDSF_3881YPDSF_3882YPDSF_3880
YPES377628 YPN_0252YPN_0247YPN_0250YPN_0249YPN_0251
YPES360102 YPA_3516YPA_3522YPA_3519YPA_3520YPA_3517
YPES349746 YPANGOLA_A0032YPANGOLA_A0025YPANGOLA_A0028YPANGOLA_A0027YPANGOLA_A0030
YPES214092 YPO0026YPO0020YPO0023YPO0022YPO0024
YPES187410 Y3803Y3808Y3805Y3806Y3804
YENT393305 YE0029YE0023YE0026YE0025YE0027
XORY360094 XOOORF_4397XOOORF_0296XOOORF_0297XOOORF_0293
XORY342109 XOO0888XOO4225XOO4224XOO4228
XORY291331 XOO0973XOO4484XOO4483XOO4488
XFAS405440 XFASM12_0552XFASM12_1118XFASM12_1119XFASM12_1124
XFAS183190 PD_0494PD_1020PD_1021PD_1026
XFAS160492 XF1213XF1849XF1848XF1842
XCAM487884 XCC-B100_3428XCC-B100_0208XCC-B100_0209XCC-B100_0205
XCAM316273 XCAORF_1119XCAORF_4341XCAORF_4340XCAORF_4344
XCAM314565 XC_3309XC_0197XC_0198XC_0194
XCAM190485 XCC0926XCC0188XCC0189XCC0185
XAXO190486 XAC1004XAC0207XAC0208XAC0204
XAUT78245 XAUT_2798XAUT_4400XAUT_4399XAUT_3585
VVUL216895 VV1_0888VV1_0896VV1_0891VV1_0892VV1_0889
VVUL196600 VV0200VV0191VV0197VV0196VV0199
VPAR223926 VP0122VP0113VP0119VP0118VP0121
VFIS312309 VF0099VF0078VF0096VF0095VF0098
VEIS391735 VEIS_2746VEIS_3152VEIS_3151VEIS_3154
VCHO345073 VC0395_A2316VC0395_A2404VC0395_A2320VC0395_A2321VC0395_A2318
VCHO VC2744VC0114VC2748VC2749VC2746
TTUR377629 TERTU_4012TERTU_4423TERTU_4424TERTU_4421
TDEN292415 TBD_0772TBD_2501TBD_2500TBD_2503
TCRU317025 TCR_0169TCR_0905TCR_0906TCR_0536
STYP99287 STM4009STM4003STM4006STM4005STM4007
SSP94122 SHEWANA3_0301SHEWANA3_4114SHEWANA3_0259SHEWANA3_0258SHEWANA3_0300
SSON300269 SSO_4043SSO_4038SSO_4041SSO_4040SSO_4042
SSED425104 SSED_0293SSED_0092SSED_0283SSED_0282SSED_0292
SPRO399741 SPRO_4880SPRO_4885SPRO_4882SPRO_4883SPRO_4881
SPEA398579 SPEA_3915SPEA_0098SPEA_3929SPEA_3930SPEA_3916
SONE211586 SO_4408SO_4728SO_4471SO_4472SO_4410
SMEL266834 SMC03242SMC01042SMC01043SMC00948
SMED366394 SMED_2976SMED_1089SMED_1090SMED_1389
SLOI323850 SHEW_3553SHEW_3718SHEW_3560SHEW_3561SHEW_3554
SHIGELLA YIHKYIHIGLNLGLNGGLNA
SHAL458817 SHAL_0354SHAL_4224SHAL_0342SHAL_0341SHAL_0353
SGLO343509 SG2229SG2233SG2231SG2232SG2230
SFUM335543 SFUM_2868SFUM_0854SFUM_1934SFUM_0576
SFLE373384 SFV_3630SFV_3635SFV_3632SFV_3633SFV_3631
SFLE198214 AAN45376.1AAN45371.1AAN45374.1AAN45373.1AAN45375.1
SENT454169 SEHA_C4336SEHA_C4331SEHA_C4334SEHA_C4333SEHA_C4335
SENT321314 SCH_3900SCH_3895SCH_3898SCH_3897SCH_3899
SENT295319 SPA3850SPA3844SPA3847SPA3846SPA3848
SENT220341 STY3871STY3878STY3875STY3876STY3874
SENT209261 T3613T3618T3615T3616T3614
SDYS300267 SDY_3872SDY_3877SDY_3874SDY_3875SDY_3873
SDEN318161 SDEN_3455SDEN_3624SDEN_3457SDEN_3458SDEN_3454
SDEG203122 SDE_0511SDE_0500SDE_0499SDE_0502
SBOY300268 SBO_3883SBO_3878SBO_3881SBO_3880SBO_3882
SBAL402882 SHEW185_0308SHEW185_4349SHEW185_0259SHEW185_0258SHEW185_0307
SBAL399599 SBAL195_0312SBAL195_4491SBAL195_0267SBAL195_0266SBAL195_0311
SALA317655 SALA_2303SALA_1276SALA_1275SALA_0149
RSOL267608 RSC1296RSC1260RSC1261RSP0886
RRUB269796 RRU_A0148RRU_A1677RRU_A1678RRU_A2086
RPAL316058 RPB_0103RPB_2883RPB_2882RPB_2558
RPAL316057 RPD_0699RPD_2589RPD_2590RPD_2901
RPAL316056 RPC_2526RPC_2577RPC_2578RPC_2386
RPAL316055 RPE_2710RPE_2757RPE_2758RPE_2505
RPAL258594 RPA0408RPA2592RPA2593RPA2967
RMET266264 RMET_2024RMET_2060RMET_2059RMET_2062
RLEG216596 RL4506RL2256RL2257RL2392
RFER338969 RFER_2137RFER_2981RFER_2982RFER_2979
REUT381666 H16_A2294H16_A2333H16_A2332H16_A2335
REUT264198 REUT_A2021REUT_A2055REUT_A2054REUT_A2057
RETL347834 RHE_CH03915RHE_CH01947RHE_CH01948RHE_CH02102
PSYR223283 PSPTO_0361PSPTO_0353PSPTO_0352PSPTO_0359
PSYR205918 PSYR_4815PSYR_4821PSYR_4822PSYR_4817
PSTU379731 PST_0355PST_0350PST_0349PST_0353
PSP56811 PSYCPRWF_0380PSYCPRWF_1804PSYCPRWF_1805PSYCPRWF_1645
PSP312153 PNUC_1224PNUC_1254PNUC_1253PNUC_1255
PSP296591 BPRO_2429BPRO_1809BPRO_1810BPRO_1807
PPUT76869 PPUTGB1_5096PPUTGB1_5100PPUTGB1_5101PPUTGB1_5098
PPUT351746 PPUT_4918PPUT_4922PPUT_4923PPUT_4920
PPUT160488 PP_5044PP_5047PP_5048PP_5046
PPRO298386 PBPRA3491PBPRA3499PBPRA3494PBPRA3495PBPRA3492
PNAP365044 PNAP_2008PNAP_2778PNAP_2777PNAP_2780
PMEN399739 PMEN_4138PMEN_4143PMEN_4144PMEN_4140
PLUM243265 PLU0238PLU0229PLU0236PLU0235PLU0237
PING357804 PING_3483PING_3487PING_3488PING_3484
PHAL326442 PSHAA0167PSHAA0164PSHAA0163PSHAA0166
PFLU220664 PFL_0388PFL_0378PFL_0377PFL_0386
PFLU216595 PFLU0350PFLU0344PFLU0343PFLU0348
PFLU205922 PFL_0347PFL_0340PFL_0339PFL_0344
PENT384676 PSEEN0392PSEEN0387PSEEN0386PSEEN0390
PCRY335284 PCRYO_0373PCRYO_1716PCRYO_1717PCRYO_1440
PCAR338963 PCAR_1211PCAR_1993PCAR_1994PCAR_1501
PATL342610 PATL_1024PATL_1027PATL_1028PATL_1025
PAER208964 PA5117PA5124PA5125PA5119
PAER208963 PA14_67560PA14_67670PA14_67680PA14_67600
OCAR504832 OCAR_4305OCAR_6095OCAR_6096OCAR_5901
OANT439375 OANT_3304OANT_2071OANT_2072OANT_2087
NWIN323098 NWI_0554NWI_1444NWI_1445NWI_1904
NHAM323097 NHAM_0644NHAM_1836NHAM_1837NHAM_2234
NARO279238 SARO_2542SARO_1927SARO_1928SARO_1108
MSP409 M446_2264M446_5929M446_5930M446_6588
MSP400668 MMWYL1_0738MMWYL1_0735MMWYL1_0734MMWYL1_0736
MSP266779 MESO_3364MESO_1619MESO_1618MESO_1544
MPET420662 MPE_A1918MPE_A2074MPE_A2073MPE_A2076
MMAR394221 MMAR10_0339MMAR10_1441MMAR10_2539MMAR10_1330
MLOT266835 MLL4112MLR0397MLR0398MLL0343
MFLA265072 MFLA_1259MFLA_2449MFLA_2450MFLA_2447
MEXT419610 MEXT_1265MEXT_2819MEXT_2820MEXT_2377
MCAP243233 MCA_2852MCA_2542MCA_2541MCA_1677
MAQU351348 MAQU_0770MAQU_0767MAQU_0766MAQU_0769
LCHO395495 LCHO_1704LCHO_3583LCHO_3584LCHO_3581
KPNE272620 GKPORF_B3520GKPORF_B3515GKPORF_B3518GKPORF_B3517GKPORF_B3519
JSP375286 MMA_2492MMA_1080MMA_1081MMA_1078
ILOI283942 IL2438IL0029IL2436IL2435IL2437
HHAL349124 HHAL_0153HHAL_1216HHAL_1215HHAL_1582
HCHE349521 HCH_01037HCH_01034HCH_01033HCH_01036
HARS204773 HEAR2430HEAR0950HEAR0951HEAR0948
GURA351605 GURA_4008GURA_0915GURA_0916GURA_2228
GSUL243231 GSU_0500GSU_1004GSU_1003GSU_1835
GMET269799 GMET_3013GMET_2562GMET_2563GMET_1352
GBET391165 GBCGDNIH1_2120GBCGDNIH1_1227GBCGDNIH1_1226GBCGDNIH1_0957
ESP42895 ENT638_4094ENT638_4100ENT638_4097ENT638_4098ENT638_4096
ELIT314225 ELI_09020ELI_06280ELI_06275ELI_01660
EFER585054 EFER_3901EFER_3611EFER_3904EFER_3905EFER_3903
ECOO157 YIHKYIHIGLNLGLNGGLNA
ECOL83334 ECS4793ECS4788ECS4791ECS4790ECS4792
ECOL585397 ECED1_4573ECED1_4566ECED1_4570ECED1_4569ECED1_4571
ECOL585057 ECIAI39_3130ECIAI39_3135ECIAI39_3132ECIAI39_3133ECIAI39_3131
ECOL585056 ECUMN_4395ECUMN_4389ECUMN_4392ECUMN_4391ECUMN_4393
ECOL585055 EC55989_4347EC55989_4341EC55989_4344EC55989_4343EC55989_4345
ECOL585035 ECS88_4321ECS88_4315ECS88_4319ECS88_4318ECS88_4320
ECOL585034 ECIAI1_4071ECIAI1_4065ECIAI1_4068ECIAI1_4067ECIAI1_4069
ECOL481805 ECOLC_4145ECOLC_4150ECOLC_4147ECOLC_4148ECOLC_4146
ECOL469008 ECBD_4156ECBD_4162ECBD_4158ECBD_4159ECBD_4157
ECOL439855 ECSMS35_4256ECSMS35_4249ECSMS35_4254ECSMS35_4253ECSMS35_4255
ECOL413997 ECB_03756ECB_03751ECB_03754ECB_03753ECB_03755
ECOL409438 ECSE_4154ECSE_4149ECSE_4152ECSE_4151ECSE_4153
ECOL405955 APECO1_2591APECO1_2596APECO1_2593APECO1_2594APECO1_2592
ECOL364106 UTI89_C4460UTI89_C4455UTI89_C4458UTI89_C4457UTI89_C4459
ECOL362663 ECP_4082ECP_4076ECP_4080ECP_4079ECP_4081
ECOL331111 ECE24377A_4394ECE24377A_4384ECE24377A_4391ECE24377A_4390ECE24377A_4392
ECOL316407 ECK3864:JW5571:B3871ECK3859:JW3837:B3866ECK3862:JW3840:B3869ECK3861:JW3839:B3868ECK3863:JW3841:B3870
ECOL199310 C4820C4815C4818C4817C4819
ECAR218491 ECA0030ECA0024ECA0028ECA0027ECA0029
DRED349161 DRED_0472DRED_2000DRED_2001DRED_2807
DARO159087 DARO_1998DARO_3759DARO_3758DARO_3763
CVIO243365 CV_2410CV_3591CV_3592CV_3589
CSAL290398 CSAL_0239CSAL_0245CSAL_0246CSAL_0243
CPSY167879 CPS_0606CPS_4825CPS_0398CPS_0397CPS_0400
CJAP155077 CJA_3664CJA_3536CJA_3537CJA_3534
BVIE269482 BCEP1808_1473BCEP1808_2227BCEP1808_2226BCEP1808_2228
BTHA271848 BTH_I2557BTH_I1845BTH_I1846BTH_I1844
BSUI204722 BR_A0875BR_1118BR_1117BR_1004
BSP376 BRADO0265BRADO3867BRADO3866BRADO4205
BSP36773 BCEP18194_A4648BCEP18194_A5457BCEP18194_A5456BCEP18194_A5458
BPSE320373 BURPS668_1748BURPS668_2633BURPS668_2632BURPS668_2634
BPSE320372 BURPS1710B_A2082BURPS1710B_A3000BURPS1710B_A2999BURPS1710B_A3001
BPSE272560 BPSL1911BPSL2317BPSL2316BPSL2318
BPET94624 BPET3130BPET2275BPET2276BPET2274
BPER257313 BP1250BP1597BP1598BP1596
BPAR257311 BPP1865BPP2987BPP2986BPP2988
BOVI236 GBOORFA0904GBOORF1118GBOORF1117GBOORF1000
BMEL359391 BAB2_0361BAB1_1141BAB1_1140BAB1_1023
BMEL224914 BMEII0419BMEI0865BMEI0866BMEI0979
BMAL320389 BMA10247_0999BMA10247_1523BMA10247_1522BMA10247_1524
BMAL320388 BMASAVP1_A1499BMASAVP1_A2251BMASAVP1_A2250BMASAVP1_A2253
BMAL243160 BMA_1053BMA_1741BMA_1740BMA_1743
BJAP224911 BLR0540BLR4487BLR4488BLR4949
BCEN331272 BCEN2424_1507BCEN2424_2148BCEN2424_2147BCEN2424_2149
BCEN331271 BCEN_1027BCEN_5929BCEN_5930BCEN_5928
BCAN483179 BCAN_B0893BCAN_A1137BCAN_A1136BCAN_A1020
BBRO257310 BB3243BB2953BB2952BB2954
BAMB398577 BAMMC406_1429BAMMC406_2058BAMMC406_2057BAMMC406_2059
BAMB339670 BAMB_1389BAMB_2185BAMB_2184BAMB_2186
BABO262698 BRUAB2_0357BRUAB1_1124BRUAB1_1123BRUAB1_1009
ASP76114 EBA6376EBA4117EBA4116EBA4121
ASP62977 ACIAD0703ACIAD1369ACIAD1368ACIAD2458
ASP62928 AZO1999AZO0736AZO0735AZO0738
ASP232721 AJS_2558AJS_1191AJS_1192AJS_1189
ASAL382245 ASA_4119ASA_4127ASA_4122ASA_4123ASA_4120
AHYD196024 AHA_0278AHA_0270AHA_0275AHA_0274AHA_0277
AFER243159 AFE_0366AFE_0207AFE_0208AFE_2571
AEHR187272 MLG_0941MLG_0015MLG_0016MLG_0013
ACRY349163 ACRY_1307ACRY_2033ACRY_2034ACRY_3057
ACAU438753 AZC_0331AZC_3087AZC_3086AZC_1601
ABOR393595 ABO_2269ABO_2260ABO_2259ABO_2262
ABAU360910 BAV2391BAV1930BAV1929BAV1931
AAVE397945 AAVE_3380AAVE_1444AAVE_1445AAVE_1442


Organism features enriched in list (features available for 178 out of the 189 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.225e-61092
Disease:Bubonic_plague 0.000763466
Disease:Dysentery 0.000763466
Disease:Gastroenteritis 0.00059261013
Endospores:No 2.695e-836211
Endospores:Yes 3.584e-8153
GC_Content_Range4:0-40 6.566e-412213
GC_Content_Range4:40-60 2.917e-898224
GC_Content_Range4:60-100 6.209e-1278145
GC_Content_Range7:30-40 5.112e-292166
GC_Content_Range7:50-60 3.904e-1162107
GC_Content_Range7:60-70 1.306e-1478134
Genome_Size_Range5:2-4 1.741e-734197
Genome_Size_Range5:4-6 4.178e-29115184
Genome_Size_Range5:6-10 3.039e-62947
Genome_Size_Range9:2-3 5.941e-1011120
Genome_Size_Range9:4-5 1.476e-95596
Genome_Size_Range9:5-6 1.619e-156088
Genome_Size_Range9:6-8 1.004e-72738
Gram_Stain:Gram_Neg 1.489e-32163333
Gram_Stain:Gram_Pos 4.170e-271150
Habitat:Host-associated 0.006060051206
Habitat:Multiple 0.000119873178
Habitat:Specialized 0.0004456653
Motility:No 2.081e-1313151
Motility:Yes 3.714e-14123267
Optimal_temp.:25-30 8.759e-81719
Oxygen_Req:Anaerobic 2.805e-107102
Oxygen_Req:Facultative 1.217e-789201
Pathogenic_in:Plant 0.00058891115
Shape:Coccus 7.841e-9582
Shape:Rod 2.655e-20154347
Shape:Sphere 0.0075497119
Shape:Spiral 0.0017131334
Temp._range:Mesophilic 0.0011798157473
Temp._range:Psychrophilic 0.004047179
Temp._range:Thermophilic 0.0000304135



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 288
Effective number of orgs (counting one per cluster within 468 clusters): 220

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.1
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SELO269084 ncbi Synechococcus elongatus PCC 63011
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SARE391037 ncbi Salinispora arenicola CNS-2051
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT31
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP35761 Nocardioides sp.1
NSP103690 ncbi Nostoc sp. PCC 71201
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-001
FTUL418136 ncbi Francisella tularensis tularensis WY96-34181
FTUL401614 ncbi Francisella novicida U1121
FTUL393115 ncbi Francisella tularensis tularensis FSC1981
FTUL393011 ncbi Francisella tularensis holarctica OSU181
FTUL351581 Francisella tularensis holarctica FSC2001
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S41
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R11
DNOD246195 ncbi Dichelobacter nodosus VCS1703A1
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E881
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CDIF272563 ncbi Clostridium difficile 6300
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1111
CBUR360115 ncbi Coxiella burnetii RSA 3311
CBUR227377 ncbi Coxiella burnetii RSA 4931
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN1
CBLO203907 ncbi Candidatus Blochmannia floridanus1
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  EG11837   EG11835   EG10387   EG10385   EG10383   
WPIP955 WD_0227
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX649
TWHI218496 TW0483
TWHI203267 TW261
TVOL273116
TTHE300852
TTHE262724
TTEN273068 TTE0882
TSP28240 TRQ2_1837
TPET390874 TPET_1799
TPEN368408
TPAL243276 TP_0519
TMAR243274 TM_0943
TLET416591 TLET_0896
TKOD69014
TFUS269800 TFU_0988
TDEN243275 TDE_1969
TACI273075
SWOL335541 SWOL_1787
STRO369723 STROP_3332
STOK273063 ST1387
STHE322159 STER_0771
STHE299768 STR0729
STHE264199 STU0729
SSUI391296
SSUI391295 SSU05_0468
SSP321332 CYB_2804
SSP321327 CYA_1363
SSOL273057 SSO0366
SSAP342451 SSP1680
SRUB309807
SPYO370554 MGAS10750_SPY1363
SPYO370553
SPYO370552 MGAS10270_SPY1271
SPYO370551 MGAS9429_SPY1250
SPYO319701 M28_SPY1194
SPYO293653 M5005_SPY1255
SPYO286636 M6_SPY1276
SPYO198466
SPYO193567 SPS0684
SPYO186103 SPYM18_1544
SPYO160490 SPY1527
SPNE488221 SP70585_0740
SPNE487214 SPH_0776
SPNE487213 SPT_0705
SPNE171101 SPR0598
SPNE170187
SPNE1313 SPJ_0631
SMUT210007 SMU_546
SMAR399550
SHAE279808 SH1843
SGOR29390 SGO_0669
SERY405948 SACE_1623
SEPI176280 SE_0807
SEPI176279 SERP0696
SELO269084 SYC1938_D
SCO SCO2198
SAVE227882 SAV6005
SAUR93062 SACOL1118
SAUR93061 SAOUHSC_01058
SAUR426430 NWMN_0974
SAUR418127 SAHV_1101
SAUR367830 SAUSA300_1009
SAUR359787 SAURJH1_1191
SAUR359786 SAURJH9_1169
SAUR282459 SAS1044
SAUR282458 SAR1083
SAUR273036 SAB0974
SAUR196620 MW0992
SAUR158879 SA0959
SAUR158878 SAV1109
SARE391037 SARE_3568
SAGA211110 GBS0520
SAGA208435 SAG_0473
SAGA205921 SAK_0575
SACI330779 SACI_1483
RXYL266117
RTYP257363 RT0254
RSP101510 RHA1_RO01157
RSAL288705 RSAL33209_2447
RRIC452659 RRIOWA_0420
RRIC392021 A1G_01995
RPRO272947 RP263
RMAS416276 RMA_0356
RFEL315456 RF_1018
RCON272944 RC0349
RCAN293613 A1E_01510
RBEL391896 A1I_06375
RBEL336407
RALB246199
RAKA293614 A1C_01895
PTOR263820
PSP117 RB11669
PRUM264731
PPEN278197 PEPE_1156
PMOB403833 PMOB_1793
PMAR167539 PRO_1038
PLUT319225 PLUT_0344
PISL384616
PINT246198
PHOR70601 PH0359
PGIN242619
PFUR186497 PF0450
PDIS435591 BDI_0114
PAST100379
PARS340102
PAER178306
PACN267747 PPA0671
PABY272844 PAB1292
OTSU357244
NSP35761 NOCA_2295
NSP103690 ALR2328
NSEN222891 NSE_0350
NPHA348780
NFAR247156 NFA16670
MVAN350058 MVAN_3585
MTUB419947 MRA_2237
MTUB336982 TBFG_12249
MTHE349307
MTHE187420 MTH1570
MTBRV RV2220
MTBCDC MT2278
MSYN262723
MSTA339860 MSP_0234
MSP189918 MKMS_3382
MSP164757 MJLS_3331
MSP164756 MMCS_3320
MSME246196 MSMEG_4290
MSED399549 MSED_1612
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM0964
MMAR444158
MMAR426368
MMAR402880
MMAR368407 MEMAR_2135
MMAR267377
MLEP272631 ML0925
MLAB410358
MKAN190192 MK0338
MJAN243232 MJ_1346
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0779
MGIL350054 MFLV_2928
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1975
MBOV410289 BCG_2237
MBOV233413 MB2244
MBAR269797 MBAR_A0666
MAVI243243 MAV_2267
MART243272
MAEO419665
MACE188937 MA4216
MABS561007 MAB_1933C
LXYL281090 LXX10080
LWEL386043 LWE1045
LSAK314315 LSA1079
LREU557436 LREU_0637
LPLA220668 LP_2146
LMES203120 LEUM_1342
LLAC272623 L0370
LLAC272622 LACR_2298
LJOH257314 LJ_0995
LINN272626 LIN1055
LHEL405566
LGAS324831 LGAS_1181
LDEL390333 LDB0763
LDEL321956 LBUL_0696
LCAS321967 LSEI_1313
LACI272621 LBA0831
KRAD266940 KRAD_3291
IHOS453591 IGNI_1228
HWAL362976
HSP64091
HSAL478009
HMUK485914 HMUK_0709
HMAR272569
HHEP235279 HH_0560
HBUT415426 HBUT_1195
GFOR411154
FTUL458234 FTA_0811
FTUL418136 FTW_1225
FTUL401614 FTN_1157
FTUL393115 FTF1179
FTUL393011 FTH_0769
FTUL351581 FTL_0768
FSUC59374
FSP1855 FRANEAN1_1770
FSP106370 FRANCCI3_3142
FRANT BIPA
FPHI484022 FPHI_1911
FNUC190304 FN0634
FNOD381764 FNOD_1449
FMAG334413
FJOH376686
FALN326424 FRAAL5161
ERUM302409 ERGA_CDS_00510
ERUM254945 ERWE_CDS_00520
ECHA205920 ECH_0089
ECAN269484 ECAJ_0054
DSP255470 CBDBA1591
DSP216389
DRAD243230 DR_1198
DNOD246195 DNO_0350
DETH243164 DET_0127
CTRA471473
CTRA471472
CTET212717 CTC_01060
CTEP194439 CT_1424
CSUL444179
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_3484
CPER289380 CPR_1744
CPER195103 CPF_2027
CPER195102 CPE1774
CPEL335992 SAR11_0747
CNOV386415 NT01CX_2273
CMUR243161
CMIC443906 CMM_1636
CMIC31964 CMS1619
CMET456442 MBOO_1947
CMAQ397948
CKOR374847
CKLU431943 CKL_1330
CJEI306537 JK0702
CHUT269798
CGLU196627 CG2429
CFEL264202
CEFF196164 CE2116
CDIP257309 DIP1644
CDIF272563
CCHL340177
CCAV227941
CBUR434922 COXBU7E912_0948
CBUR360115 COXBURSA331_A1063
CBUR227377 CBU_0884
CBOT536232 CLM_2865
CBOT515621 CLJ_B2788
CBOT508765 CLL_A1180
CBOT498213 CLD_2007
CBOT441772 CLI_2621
CBOT441771 CLC_2429
CBOT441770 CLB_2499
CBOT36826 CBO2558
CBLO291272 BPEN_643
CBLO203907 BFL618
CACE272562 CAC1684
CABO218497
BXEN266265
BTUR314724
BTHE226186
BSP107806 BU433
BLON206672 BL1076
BHER314723 BH0763
BGAR290434 BG0786
BFRA295405 BF1592
BFRA272559
BCIC186490
BBUR224326 BB_0763
BAPH372461 BCC_267
BAPH198804 BUSG418
BAFZ390236 BAPKO_0810
AYEL322098
AURANTIMONAS
ASP1667 ARTH_1600
APHA212042 APH_1246
APER272557
ANAE240017 ANA_0904
AMAR234826 AM1206
ALAI441768 ACL_0204
AFUL224325 AF_0949
ACEL351607 ACEL_0923
ABUT367737 ABU_1903
AAUR290340 AAUR_1744


Organism features enriched in list (features available for 268 out of the 288 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00140255592
Arrangment:Clusters 1.378e-61717
Disease:Pharyngitis 0.001883188
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00017301111
Disease:Wide_range_of_infections 0.00017301111
Disease:bronchitis_and_pneumonitis 0.001883188
Endospores:No 9.592e-20149211
GC_Content_Range4:0-40 1.102e-17147213
GC_Content_Range4:40-60 1.197e-773224
GC_Content_Range4:60-100 0.000055747145
GC_Content_Range7:0-30 8.407e-164647
GC_Content_Range7:30-40 2.427e-6101166
GC_Content_Range7:50-60 7.122e-1120107
GC_Content_Range7:60-70 4.335e-737134
GC_Content_Range7:70-100 0.00232341011
Genome_Size_Range5:0-2 5.153e-24124155
Genome_Size_Range5:4-6 2.605e-2232184
Genome_Size_Range5:6-10 0.00368841347
Genome_Size_Range9:0-1 1.287e-82627
Genome_Size_Range9:1-2 1.466e-1598128
Genome_Size_Range9:2-3 0.000046874120
Genome_Size_Range9:3-4 0.00368922577
Genome_Size_Range9:4-5 1.825e-82096
Genome_Size_Range9:5-6 3.574e-121288
Genome_Size_Range9:6-8 0.0006893838
Gram_Stain:Gram_Neg 2.548e-3086333
Gram_Stain:Gram_Pos 1.084e-19116150
Habitat:Aquatic 0.00720933291
Habitat:Host-associated 0.0002525114206
Habitat:Specialized 0.00244603453
Habitat:Terrestrial 0.0037024731
Motility:No 1.559e-22120151
Motility:Yes 8.421e-2069267
Optimal_temp.:- 9.205e-693257
Optimal_temp.:30-37 0.00014621618
Optimal_temp.:37 0.000015868106
Oxygen_Req:Aerobic 0.004726672185
Oxygen_Req:Anaerobic 9.837e-1176102
Oxygen_Req:Microaerophilic 0.0015038218
Pathogenic_in:Human 0.0054121111213
Shape:Coccus 7.302e-106382
Shape:Irregular_coccus 1.378e-61717
Shape:Rod 1.133e-11120347
Shape:Sphere 0.00051291619
Temp._range:Hyperthermophilic 4.173e-62123
Temp._range:Mesophilic 0.0045086206473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951590.7518
GLYCOCAT-PWY (glycogen degradation I)2461720.6955
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491300.6941
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251610.6741
PWY-5918 (heme biosynthesis I)2721760.6581
TYRFUMCAT-PWY (tyrosine degradation I)1841410.6519
PWY-5148 (acyl-CoA hydrolysis)2271580.6467
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181540.6432
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001830.6428
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861760.6253
PWY-4041 (γ-glutamyl cycle)2791730.6204
PWY-1269 (CMP-KDO biosynthesis I)3251840.5970
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901720.5881
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761290.5864
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911720.5859
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961730.5817
AST-PWY (arginine degradation II (AST pathway))1201020.5808
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831300.5710
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391840.5690
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001710.5590
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481850.5585
PWY-5028 (histidine degradation II)1301040.5547
P344-PWY (acrylonitrile degradation)2101380.5487
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911300.5457
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911300.5457
PWY-5913 (TCA cycle variation IV)3011680.5358
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561130.5293
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491490.5236
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491490.5236
REDCITCYC (TCA cycle variation II)1741200.5231
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551510.5229
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291730.5119
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96820.5114
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351010.5089
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381020.5056
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651820.5052
PWY-6087 (4-chlorocatechol degradation)2231370.5051
GLUCONSUPER-PWY (D-gluconate degradation)2291390.5035
PWY-561 (superpathway of glyoxylate cycle)1621120.5003
PWY-46 (putrescine biosynthesis III)1381010.4972
GLYOXYLATE-BYPASS (glyoxylate cycle)1691140.4926
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981880.4889
PWY-5386 (methylglyoxal degradation I)3051620.4852
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112870.4821
PWY-6193 (3-chlorocatechol degradation II (ortho))1941220.4761
GALACTITOLCAT-PWY (galactitol degradation)73660.4761
PWY-5340 (sulfate activation for sulfonation)3851830.4757
GALACTARDEG-PWY (D-galactarate degradation I)1511040.4741
PWY0-981 (taurine degradation IV)106830.4724
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111620.4724
GLUCARDEG-PWY (D-glucarate degradation I)1521040.4706
PWY-2361 (3-oxoadipate degradation)82700.4660
GALACTCAT-PWY (D-galactonate degradation)104810.4630
VALDEG-PWY (valine degradation I)2901540.4621
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81690.4612
PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)1781130.4560
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121260.4546
PWY-5669 (phosphatidylethanolamine biosynthesis I)4161870.4507
P601-PWY (D-camphor degradation)95750.4485
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4221880.4480
LIPASYN-PWY (phospholipases)2121250.4472
DAPLYSINESYN-PWY (lysine biosynthesis I)3421670.4438
PWY-3162 (tryptophan degradation V (side chain pathway))94740.4437
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94740.4437
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891510.4434
PWY-6268 (adenosylcobalamin salvage from cobalamin)3171590.4388
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135920.4326
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741740.4315
PWY-5188 (tetrapyrrole biosynthesis I)4391890.4272
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261600.4271
PWY-6089 (3-chlorocatechol degradation I (ortho))102760.4252
1CMET2-PWY (formylTHF biosynthesis I)3691700.4125
PWY-4302 (aerobic respiration -- electron donor III)2141210.4123
PWY0-1313 (acetate conversion to acetyl-CoA)3851740.4111
PWY-4221 (pantothenate and coenzymeA biosynthesis II)112790.4094
GLUTAMINDEG-PWY (glutamine degradation I)1911120.4094
PWY-6134 (tyrosine biosynthesis IV)89680.4091
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3831730.4076
PWY0-862 (cis-dodecenoyl biosynthesis)3431620.4067
PWY0-1182 (trehalose degradation II (trehalase))70580.4065
PWY-5964 (molybdopterin guanine dinucleotide biosynthesis)2901460.4062
2ASDEG-PWY (orthanilate degradation)72590.4058
PWY0-501 (lipoate biosynthesis and incorporation I)3851730.4039
ACETATEUTIL-PWY (superpathway of acetate utilization and formation)2371280.4035
GLYSYN-THR-PWY (glycine biosynthesis IV)2151200.4023
PWY0-1337 (oleate β-oxidation)1991140.4016



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11835   EG10387   EG10385   EG10383   
EG118370.9985660.9991890.9991090.999368
EG118350.9987580.9988440.998629
EG103870.9999270.999721
EG103850.999678
EG10383



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PAIRWISE BLAST SCORES:

  EG11837   EG11835   EG10387   EG10385   EG10383   
EG118370.0f0----
EG11835-0.0f0---
EG10387--0.0f0--
EG10385---0.0f0-
EG10383----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10383 EG10385 EG10387 EG11837 (centered at EG10383)
EG11835 (centered at EG11835)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11837   EG11835   EG10387   EG10385   EG10383   
415/62378/623251/623223/623410/623
AAEO224324:0:Tyes---7030
AAUR290340:2:Tyes----0
AAVE397945:0:Tyes1905-230
ABAC204669:0:Tyes3684-0987-
ABAU360910:0:Tyes470-102
ABOR393595:0:Tyes10-103
ABUT367737:0:Tyes----0
ACAU438753:0:Tyes0-278927881286
ACEL351607:0:Tyes----0
ACRY349163:8:Tyes0-7337341763
ADEH290397:0:Tyes--99803363
AEHR187272:0:Tyes923-230
AFER243159:0:Tyes156-012326
AFUL224325:0:Tyes----0
AHYD196024:0:Tyes80547
ALAI441768:0:Tyes0----
AMAR234826:0:Tyes----0
AMAR329726:9:Tyes0---1408
AMET293826:0:Tyes0-15331532-
ANAE240017:0:Tyes----0
AORE350688:0:Tyes784-01-
APHA212042:0:Tyes----0
APLE416269:0:Tyes0919--1936
APLE434271:0:Tno0905--1956
ASAL382245:5:Tyes08341
ASP1667:3:Tyes----0
ASP232721:2:Tyes1313-230
ASP62928:0:Tyes1296-103
ASP62977:0:Tyes0-6406391644
ASP76114:2:Tyes1338-103
AVAR240292:3:Tyes--1204-0
BABO262698:0:Tno0----
BABO262698:1:Tno--1081070
BAFZ390236:2:Fyes---0-
BAMB339670:3:Tno0-817816818
BAMB398577:3:Tno0-639638640
BAMY326423:0:Tyes132-0-395
BANT260799:0:Tno314---0
BANT261594:2:Tno319---0
BANT568206:2:Tyes3333-2299-0
BANT592021:2:Tno329---0
BAPH198804:0:Tyes0----
BAPH372461:0:Tyes0----
BBAC264462:0:Tyes--256829280
BBAC360095:0:Tyes0---382
BBRO257310:0:Tyes292-102
BBUR224326:21:Fno---0-
BCAN483179:0:Tno0----
BCAN483179:1:Tno--1161150
BCEN331271:0:Tno--120
BCEN331271:2:Tno0----
BCEN331272:3:Tyes0-640639641
BCER226900:1:Tyes2438-0--
BCER288681:0:Tno2359-0-2107
BCER315749:1:Tyes339-0-66
BCER405917:1:Tyes2284-0-2019
BCER572264:1:Tno2518-0-2258
BCLA66692:0:Tyes222---0
BFRA295405:0:Tno--0--
BGAR290434:2:Fyes---0-
BHAL272558:0:Tyes830-0-558
BHEN283166:0:Tyes0---797
BHER314723:0:Fyes---0-
BJAP224911:0:Fyes0-397339744440
BLIC279010:0:Tyes176-0-469
BLON206672:0:Tyes----0
BMAL243160:1:Tno0-608607610
BMAL320388:1:Tno0-733732735
BMAL320389:1:Tyes0-511510512
BMEL224914:0:Tno0----
BMEL224914:1:Tno--01117
BMEL359391:0:Tno0----
BMEL359391:1:Tno--1041030
BOVI236:0:Tyes0----
BOVI236:1:Tyes--98970
BPAR257311:0:Tno0-106310621064
BPER257313:0:Tyes0-310311309
BPET94624:0:Tyes868-120
BPSE272560:1:Tyes0-413412414
BPSE320372:1:Tno0-823822824
BPSE320373:1:Tno0-852851853
BPUM315750:0:Tyes78-0-346
BQUI283165:0:Tyes0---563
BSP107806:2:Tyes0----
BSP36773:2:Tyes0-827826828
BSP376:0:Tyes0-340934083741
BSUB:0:Tyes136-0-412
BSUI204722:0:Tyes0----
BSUI204722:1:Tyes--1121110
BSUI470137:0:Tno0----
BSUI470137:1:Tno---1160
BTHA271848:1:Tno699-120
BTHU281309:1:Tno2346-0-2096
BTHU412694:1:Tno2158-0-1913
BTRI382640:1:Tyes0---1130
BVIE269482:7:Tyes0-748747749
BWEI315730:4:Tyes309---0
CACE272562:1:Tyes0----
CAULO:0:Tyes--01598233
CBEI290402:0:Tyes0-2644-3026
CBLO203907:0:Tyes----0
CBLO291272:0:Tno----0
CBOT36826:1:Tno0----
CBOT441770:0:Tyes0----
CBOT441771:0:Tno0----
CBOT441772:1:Tno0----
CBOT498213:1:Tno0----
CBOT508765:1:Tyes0----
CBOT515621:2:Tyes0----
CBOT536232:0:Tno0----
CBUR227377:1:Tyes0----
CBUR360115:1:Tno0----
CBUR434922:2:Tno0----
CCON360104:2:Tyes0---1073
CCUR360105:0:Tyes0---1333
CDES477974:0:Tyes--0-1340
CDIP257309:0:Tyes----0
CEFF196164:0:Fyes----0
CFET360106:0:Tyes0---1014
CGLU196627:0:Tyes----0
CHOM360107:1:Tyes47---0
CHYD246194:0:Tyes--128511190
CJAP155077:0:Tyes130-230
CJEI306537:0:Tyes----0
CJEJ192222:0:Tyes0---624
CJEJ195099:0:Tno0---738
CJEJ354242:2:Tyes0---620
CJEJ360109:0:Tyes0---1173
CJEJ407148:0:Tno0---637
CKLU431943:1:Tyes0----
CMET456442:0:Tyes----0
CMIC31964:2:Tyes----0
CMIC443906:2:Tyes----0
CNOV386415:0:Tyes0----
CPEL335992:0:Tyes----0
CPER195102:1:Tyes0----
CPER195103:0:Tno0----
CPER289380:3:Tyes0----
CPHY357809:0:Tyes0----
CPRO264201:0:Fyes0-251250-
CPSY167879:0:Tyes2014310103
CRUT413404:0:Tyes0---120
CSAL290398:0:Tyes0-674
CSP501479:8:Fyes--0-518
CSP78:2:Tyes--173401988
CTEP194439:0:Tyes0----
CTET212717:0:Tyes0----
CVES412965:0:Tyes0---117
CVIO243365:0:Tyes0-122012211218
DARO159087:0:Tyes0-176517641769
DDES207559:0:Tyes--03546-
DETH243164:0:Tyes--0--
DGEO319795:1:Tyes0---335
DHAF138119:0:Tyes1358-42040-
DNOD246195:0:Tyes0----
DOLE96561:0:Tyes--01-
DPSY177439:2:Tyes--25860-
DRAD243230:3:Tyes0----
DRED349161:0:Tyes0-152415252345
DSHI398580:5:Tyes--0-273
DSP255470:0:Tno--0--
DVUL882:1:Tyes--1610-
ECAN269484:0:Tyes----0
ECAR218491:0:Tyes50324
ECHA205920:0:Tyes----0
ECOL199310:0:Tno50324
ECOL316407:0:Tno05231
ECOL331111:6:Tno100768
ECOL362663:0:Tno60435
ECOL364106:1:Tno50324
ECOL405955:2:Tyes50324
ECOL409438:6:Tyes50324
ECOL413997:0:Tno50324
ECOL439855:4:Tno70546
ECOL469008:0:Tno06231
ECOL481805:0:Tno05231
ECOL585034:0:Tno60324
ECOL585035:0:Tno50324
ECOL585055:0:Tno60324
ECOL585056:2:Tno60324
ECOL585057:0:Tno05231
ECOL585397:0:Tno60324
ECOL83334:0:Tno50324
ECOLI:0:Tno60435
ECOO157:0:Tno50324
EFAE226185:3:Tyes287---0
EFER585054:1:Tyes2720275276274
ELIT314225:0:Tyes1495-9439420
ERUM254945:0:Tyes----0
ERUM302409:0:Tno----0
ESP42895:1:Tyes05231
FALN326424:0:Tyes----0
FNOD381764:0:Tyes----0
FNUC190304:0:Tyes0----
FPHI484022:1:Tyes0----
FRANT:0:Tno0----
FSP106370:0:Tyes----0
FSP1855:0:Tyes----0
FTUL351581:0:Tno0----
FTUL393011:0:Tno0----
FTUL393115:0:Tyes0----
FTUL401614:0:Tyes0----
FTUL418136:0:Tno0----
FTUL458234:0:Tno0----
GBET391165:0:Tyes1163-2702690
GKAU235909:1:Tyes126-0-383
GMET269799:1:Tyes1667-121712180
GOXY290633:5:Tyes0---465
GSUL243231:0:Tyes0-5025011328
GTHE420246:1:Tyes103-0-344
GURA351605:0:Tyes3075-011310
GVIO251221:0:Tyes478---0
HACI382638:1:Tyes179---0
HARS204773:0:Tyes1403-230
HAUR316274:2:Tyes3765-34430-
HBUT415426:0:Tyes----0
HCHE349521:0:Tyes4-103
HDUC233412:0:Tyes01225--398
HHAL349124:0:Tyes0-107910781437
HHEP235279:0:Tyes----0
HINF281310:0:Tyes1370--139
HINF374930:0:Tyes0141---
HINF71421:0:Tno1410--142
HMOD498761:0:Tyes--0-1660
HMUK485914:1:Tyes----0
HNEP81032:0:Tyes0-1623-1693
HPY:0:Tno0---31
HPYL357544:1:Tyes0---29
HPYL85963:0:Tno0---29
HSOM205914:1:Tyes054--1
HSOM228400:0:Tno031--1
IHOS453591:0:Tyes----0
ILOI283942:0:Tyes24620246024592461
JSP290400:1:Tyes--729-0
JSP375286:0:Tyes1436-230
KPNE272620:2:Tyes50324
KRAD266940:2:Fyes----0
LACI272621:0:Tyes0----
LBIF355278:2:Tyes350---0
LBIF456481:2:Tno359---0
LBOR355276:1:Tyes0---1000
LBOR355277:1:Tno0---155
LBRE387344:2:Tyes378---0
LCAS321967:1:Tyes0----
LCHO395495:0:Tyes0-189218931890
LDEL321956:0:Tyes0----
LDEL390333:0:Tyes0----
LGAS324831:0:Tyes0----
LINN272626:1:Tno0----
LINT189518:1:Tyes65-2604-0
LINT267671:1:Tno0-741-50
LINT363253:3:Tyes0-930729-
LJOH257314:0:Tyes0----
LLAC272622:5:Tyes0----
LLAC272623:0:Tyes0----
LMES203120:1:Tyes0----
LMON169963:0:Tno0---233
LMON265669:0:Tyes0---232
LPLA220668:0:Tyes0----
LPNE272624:0:Tno1452---0
LPNE297245:1:Fno1428---0
LPNE297246:1:Fyes1566---0
LPNE400673:0:Tno2282---0
LREU557436:0:Tyes0----
LSAK314315:0:Tyes0----
LSPH444177:1:Tyes0---337
LWEL386043:0:Tyes0----
LXYL281090:0:Tyes----0
MABS561007:1:Tyes----0
MACE188937:0:Tyes----0
MAER449447:0:Tyes440---0
MAQU351348:2:Tyes4-103
MAVI243243:0:Tyes----0
MBAR269797:1:Tyes----0
MBOV233413:0:Tno----0
MBOV410289:0:Tno----0
MBUR259564:0:Tyes----0
MCAP243233:0:Tyes1127-8338320
MEXT419610:0:Tyes0-156115621117
MFLA265072:0:Tyes0-118711881185
MGIL350054:3:Tyes----0
MHUN323259:0:Tyes----0
MJAN243232:2:Tyes----0
MKAN190192:0:Tyes----0
MLEP272631:0:Tyes----0
MLOT266835:2:Tyes2936-42430
MMAG342108:0:Tyes--167016710
MMAR368407:0:Tyes----0
MMAR394221:0:Tyes0-11012193990
MMAZ192952:0:Tyes----0
MPET420662:1:Tyes0-154153156
MSED399549:0:Tyes----0
MSME246196:0:Tyes----0
MSP164756:1:Tno----0
MSP164757:0:Tno----0
MSP189918:2:Tyes----0
MSP266779:3:Tyes1823-76750
MSP400668:0:Tyes4-102
MSP409:2:Tyes0-354235434188
MSTA339860:0:Tyes----0
MSUC221988:0:Tyes330--32
MTBCDC:0:Tno----0
MTBRV:0:Tno----0
MTHE187420:0:Tyes----0
MTHE264732:0:Tyes742-0-1134
MTUB336982:0:Tno----0
MTUB419947:0:Tyes----0
MVAN350058:0:Tyes----0
MXAN246197:0:Tyes2167-21320-
NARO279238:0:Tyes1455-8308310
NEUR228410:0:Tyes2077---0
NEUT335283:2:Tyes1254---0
NFAR247156:2:Tyes----0
NGON242231:0:Tyes0---711
NHAM323097:2:Tyes0-113211331518
NMEN122586:0:Tno814---0
NMEN122587:0:Tyes0---733
NMEN272831:0:Tno0---600
NMEN374833:0:Tno0---694
NMUL323848:3:Tyes0---513
NOCE323261:1:Tyes0---1906
NSEN222891:0:Tyes----0
NSP103690:6:Tyes----0
NSP35761:1:Tyes----0
NSP387092:0:Tyes337---0
NWIN323098:0:Tyes0-8948951366
OANT439375:4:Tyes0----
OANT439375:5:Tyes--0117
OCAR504832:0:Tyes0-179117921598
OIHE221109:0:Tyes0-1128--
PABY272844:0:Tyes----0
PACN267747:0:Tyes----0
PAER208963:0:Tyes0-782
PAER208964:0:Tno0-782
PARC259536:0:Tyes0--1200635
PATL342610:0:Tyes0-341
PCAR338963:0:Tyes0-795796297
PCRY335284:1:Tyes0-133713381063
PDIS435591:0:Tyes---0-
PENT384676:0:Tyes5-103
PFLU205922:0:Tyes8-105
PFLU216595:1:Tyes7-105
PFLU220664:0:Tyes11-109
PFUR186497:0:Tyes----0
PHAL326442:1:Tyes4-103
PHOR70601:0:Tyes----0
PING357804:0:Tyes0-451
PLUM243265:0:Fyes90768
PLUT319225:0:Tyes---0-
PMAR146891:0:Tyes0---116
PMAR167539:0:Tyes----0
PMAR167540:0:Tyes0---162
PMAR167542:0:Tyes0---187
PMAR167546:0:Tyes0---119
PMAR167555:0:Tyes25---0
PMAR59920:0:Tno25---0
PMAR74546:0:Tyes0---111
PMAR74547:0:Tyes0---26
PMAR93060:0:Tyes0---115
PMEN399739:0:Tyes0-562
PMOB403833:0:Tyes----0
PMUL272843:1:Tyes0662--2
PNAP365044:8:Tyes0-770769772
PPEN278197:0:Tyes0----
PPRO298386:2:Tyes08341
PPUT160488:0:Tno0-342
PPUT351746:0:Tyes0-452
PPUT76869:0:Tno0-452
PSP117:0:Tyes---0-
PSP296591:2:Tyes619-230
PSP312153:0:Tyes0-292830
PSP56811:2:Tyes0-143414351273
PSTU379731:0:Tyes6-104
PSYR205918:0:Tyes0-672
PSYR223283:2:Tyes9-107
PTHE370438:0:Tyes--52913720
RAKA293614:0:Fyes0----
RBEL391896:0:Fno0----
RCAN293613:0:Fyes0----
RCAS383372:0:Tyes0-1779-1535
RCON272944:0:Tno0----
RDEN375451:4:Tyes123-173-0
RETL347834:5:Tyes1944-01154
REUT264198:3:Tyes0-343336
REUT381666:2:Tyes0-393841
RFEL315456:2:Tyes0----
RFER338969:1:Tyes0-844845842
RLEG216596:6:Tyes2243-01133
RMAS416276:1:Tyes0----
RMET266264:2:Tyes0-363538
RPAL258594:0:Tyes0-219421952573
RPAL316055:0:Tyes204-2512520
RPAL316056:0:Tyes142-1951960
RPAL316057:0:Tyes0-190519062221
RPAL316058:0:Tyes0-280628052477
RPOM246200:1:Tyes0-56-257
RPRO272947:0:Tyes0----
RRIC392021:0:Fno0----
RRIC452659:0:Tyes0----
RRUB269796:1:Tyes0-152415251933
RSAL288705:0:Tyes----0
RSOL267608:0:Tyes----0
RSOL267608:1:Tyes36-01-
RSP101510:3:Fyes----0
RSP357808:0:Tyes0-2886-2843
RSPH272943:4:Tyes662-0-357
RSPH349101:2:Tno650-0-329
RSPH349102:5:Tyes--138-0
RTYP257363:0:Tno0----
SACI330779:0:Tyes----0
SACI56780:0:Tyes--01089-
SAGA205921:0:Tno0----
SAGA208435:0:Tno0----
SAGA211110:0:Tyes0----
SALA317655:1:Tyes2177-112811270
SARE391037:0:Tyes----0
SAUR158878:1:Tno0----
SAUR158879:1:Tno0----
SAUR196620:0:Tno0----
SAUR273036:0:Tno0----
SAUR282458:0:Tno0----
SAUR282459:0:Tno0----
SAUR359786:1:Tno0----
SAUR359787:1:Tno0----
SAUR367830:3:Tno0----
SAUR418127:0:Tyes0----
SAUR426430:0:Tno0----
SAUR93061:0:Fno0----
SAUR93062:1:Tno0----
SAVE227882:1:Fyes----0
SBAL399599:3:Tyes4543191044
SBAL402882:1:Tno4941521048
SBOY300268:1:Tyes50324
SCO:2:Fyes----0
SDEG203122:0:Tyes12-103
SDEN318161:0:Tyes1170340
SDYS300267:1:Tyes05231
SELO269084:0:Tyes----0
SENT209261:0:Tno05231
SENT220341:0:Tno05231
SENT295319:0:Tno60324
SENT321314:2:Tno50324
SENT454169:2:Tno50324
SEPI176279:1:Tyes0----
SEPI176280:0:Tno0----
SERY405948:0:Tyes----0
SFLE198214:0:Tyes50324
SFLE373384:0:Tno05231
SFUM335543:0:Tyes2270-27613440
SGLO343509:3:Tyes04231
SGOR29390:0:Tyes0----
SHAE279808:0:Tyes0----
SHAL458817:0:Tyes1339951012
SHIGELLA:0:Tno05231
SLAC55218:1:Fyes--210-0
SLOI323850:0:Tyes0165781
SMED366394:3:Tyes1865-01295
SMEL266834:2:Tyes1663-01188
SMUT210007:0:Tyes0----
SONE211586:1:Tyes031462632
SPEA398579:0:Tno39670398139823968
SPNE1313:0:Tyes0----
SPNE171101:0:Tno0----
SPNE487213:0:Tno0----
SPNE487214:0:Tno0----
SPNE488221:0:Tno0----
SPRO399741:1:Tyes05231
SPYO160490:0:Tno0----
SPYO186103:0:Tno0----
SPYO193567:0:Tno0----
SPYO286636:0:Tno0----
SPYO293653:0:Tno0----
SPYO319701:0:Tyes0----
SPYO370551:0:Tno0----
SPYO370552:0:Tno0----
SPYO370554:0:Tyes0----
SSAP342451:2:Tyes0----
SSED425104:0:Tyes2070197196206
SSOL273057:0:Tyes----0
SSON300269:1:Tyes50324
SSP1131:0:Tyes38---0
SSP1148:0:Tyes0---296
SSP292414:2:Tyes217-346-0
SSP321327:0:Tyes----0
SSP321332:0:Tyes----0
SSP387093:0:Tyes2013---0
SSP644076:5:Fyes213---0
SSP644076:7:Fyes--0--
SSP64471:0:Tyes0---281
SSP84588:0:Tyes36---0
SSP94122:1:Tyes4339421042
SSUI391295:0:Tyes0----
STHE264199:0:Tyes0----
STHE292459:0:Tyes886--19600
STHE299768:0:Tno0----
STHE322159:2:Tyes0----
STOK273063:0:Tyes----0
STRO369723:0:Tyes----0
STYP99287:1:Tyes60324
SWOL335541:0:Tyes----0
TCRU317025:0:Tyes0-755756375
TDEN243275:0:Tyes---0-
TDEN292415:0:Tyes0-175517541757
TDEN326298:0:Tyes0---1922
TELO197221:0:Tyes712---0
TERY203124:0:Tyes552---0
TFUS269800:0:Tyes----0
TLET416591:0:Tyes----0
TMAR243274:0:Tyes----0
TPAL243276:0:Tyes---0-
TPET390874:0:Tno----0
TPSE340099:0:Tyes0---27
TROS309801:1:Tyes--41-0
TSP1755:0:Tyes0---28
TSP28240:0:Tyes----0
TTEN273068:0:Tyes0----
TTUR377629:0:Tyes0-375376373
TWHI203267:0:Tyes----0
TWHI218496:0:Tno----0
UMET351160:0:Tyes----0
VCHO:0:Tyes26890269326942691
VCHO345073:1:Tno073452
VEIS391735:1:Tyes0-400399402
VFIS312309:2:Tyes210181720
VPAR223926:1:Tyes90658
VVUL196600:2:Tyes90658
VVUL216895:1:Tno08341
WPIP955:0:Tyes0----
WSUC273121:0:Tyes0---337
XAUT78245:1:Tyes0-16131612788
XAXO190486:0:Tyes800-340
XCAM190485:0:Tyes741-340
XCAM314565:0:Tno3115-340
XCAM316273:0:Tno0-317631753179
XCAM487884:0:Tno3257-340
XFAS160492:2:Tno0-636635629
XFAS183190:1:Tyes0-515516520
XFAS405440:0:Tno0-519520524
XORY291331:0:Tno0-355635553560
XORY342109:0:Tyes0-338233813385
XORY360094:0:Tno7926-790
YENT393305:1:Tyes60324
YPES187410:5:Tno05231
YPES214092:3:Tno60324
YPES349746:2:Tno70325
YPES360102:3:Tyes06341
YPES377628:2:Tno50324
YPES386656:2:Tno05231
YPSE273123:2:Tno50324
YPSE349747:2:Tno50324
ZMOB264203:0:Tyes1004---0



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