CANDIDATE ID: 659

CANDIDATE ID: 659

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9947350e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    8.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G6364 (miaB) (b0661)
   Products of gene:
     - G6364-MONOMER (isopentenyl-adenosine A37 tRNA methylthiolase MiaB)
       Reactions:
        N-6-isopentyl adenosine-37 tRNA + 2 S-adenosyl-L-methionine + a sulfurated sulfur donor  =  S-adenosyl-L-homocysteine + 2-methylthio-N-6-isopentyl adenosine-37 tRNA + L-methionine + 5'-deoxyadenosine + an unsulfurated sulfur acceptor

- G6363 (ybeZ) (b0660)
   Products of gene:
     - G6363-MONOMER (predicted protein with nucleoside triphosphate hydrolase domain)

- G6362 (ybeY) (b0659)
   Products of gene:
     - G6362-MONOMER (conserved protein involved in translation)

- EG11734 (phoH) (b1020)
   Products of gene:
     - EG11734-MONOMER (ATP-binding protein)

- EG10359 (fur) (b0683)
   Products of gene:
     - PD00260 (Fur)
     - CPLX0-7620 (Fur-Fe+2)
     - CPLX0-7639 (Fur-Fe+2 transcriptional dual regulator)
       Regulatees:
        TU00060 (pyrC)
        TU482 (garPLRK-rnpB)
        TU0-8630 (yjjZ)
        TU0-13913 (gspCDEFGHIJKLMO)
        TU00222 (oppABCDF)
        TU00034 (katG)
        TU00442 (rpoS)
        TU0-6507 (katE)
        TU0-13449 (ftnA)
        TU0-13514 (rcnA)
        TU0-13513 (rcnR)
        TU00042 (metH)
        TU00050 (ompF)
        TU00020 (fhuACDB)
        TU00014 (cirA)
        TU00015 (cirA)
        TU0-1283 (fur)
        TU00151 (fecABCDE)
        TU00164 (fepB)
        TU00165 (fepDGC)
        TU00166 (entCEBA-ybdB)
        TU00121 (fur)
        TU00064 (sodA)
        TU00136 (flhDC)
        TU00059 (purR)
        TU00167 (tonB)
        TU00460 (fecIR)
        TU00159 (fumB)
        TU00163 (fepA-entD)
        TU00101 (cyoABCDE)
        TU00524 (sdhCDAB-sucABCD)
        TU0-7662 (yhhY)
        TU0-7681 (nohA-ydfN-tfaQ)
        TU0-7701 (fhuF)
        TU0-7321 (mntH)
        TU0-3382 (gpmA)
        TU0-3401 (ryhB)
        TU0-3403 (ygaC)
        TU0-2581 (fhuE)
        TU0-2621 (sufABCDSE)
        TU0-2707 (metJ)
        TU0-2521 (fiu)
        TU00265 (exbBD)
        TU0-2562 (exbD)
        TU0-1681 (sodB)
        TU0-1022 (nrdHIEF)
        TU00270 (fes-ybdZ-entF-fepE)
        TU0-8330 (zinT)
        TU00269 (feoABC)
        TU0-6042 (entS)
        TU681 (hmp)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 333
Effective number of orgs (counting one per cluster within 468 clusters): 230

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM45
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP1755 Thermoanaerobacter sp.5
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TPET390874 ncbi Thermotoga petrophila RKU-14
TMAR243274 ncbi Thermotoga maritima MSB84
TFUS269800 ncbi Thermobifida fusca YX4
TERY203124 ncbi Trichodesmium erythraeum IMS1014
TELO197221 ncbi Thermosynechococcus elongatus BP-15
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STRO369723 ncbi Salinispora tropica CNB-4404
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B4
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP292414 ncbi Ruegeria sp. TM10404
SSP1148 ncbi Synechocystis sp. PCC 68034
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122285
SEPI176279 ncbi Staphylococcus epidermidis RP62A5
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SAUR93062 ncbi Staphylococcus aureus aureus COL5
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83255
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu35
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH15
SAUR359786 ncbi Staphylococcus aureus aureus JH95
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2525
SAUR273036 ncbi Staphylococcus aureus RF1225
SAUR196620 ncbi Staphylococcus aureus aureus MW25
SAUR158879 ncbi Staphylococcus aureus aureus N3155
SAUR158878 ncbi Staphylococcus aureus aureus Mu505
SARE391037 ncbi Salinispora arenicola CNS-2054
SALA317655 ncbi Sphingopyxis alaskensis RB22565
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSP101510 ncbi Rhodococcus jostii RHA14
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.5
PSP296591 ncbi Polaromonas sp. JS6664
PSP117 Pirellula sp.4
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K55
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-45
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2555
NSP35761 Nocardioides sp.4
NSP103690 ncbi Nostoc sp. PCC 71205
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NFAR247156 ncbi Nocardia farcinica IFM 101525
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16225
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-15
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra5
MTUB336982 ncbi Mycobacterium tuberculosis F115
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MTBRV ncbi Mycobacterium tuberculosis H37Rv5
MTBCDC ncbi Mycobacterium tuberculosis CDC15515
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MSP189918 ncbi Mycobacterium sp. KMS5
MSP164757 ncbi Mycobacterium sp. JLS5
MSP164756 ncbi Mycobacterium sp. MCS5
MSME246196 ncbi Mycobacterium smegmatis MC2 1555
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MLEP272631 ncbi Mycobacterium leprae TN5
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath5
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P25
MBOV233413 ncbi Mycobacterium bovis AF2122/975
MAVI243243 ncbi Mycobacterium avium 1044
MAQU351348 ncbi Marinobacter aquaeolei VT85
MAER449447 ncbi Microcystis aeruginosa NIES-8434
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LCHO395495 ncbi Leptothrix cholodnii SP-64
KRAD266940 ncbi Kineococcus radiotolerans SRS302165
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HHAL349124 ncbi Halorhodospira halophila SL15
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GOXY290633 ncbi Gluconobacter oxydans 621H4
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GBET391165 ncbi Granulibacter bethesdensis CGDNIH15
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-005
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1985
FTUL393011 ncbi Francisella tularensis holarctica OSU185
FTUL351581 Francisella tularensis holarctica FSC2005
FRANT ncbi Francisella tularensis tularensis SCHU S45
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FMAG334413 ncbi Finegoldia magna ATCC 293284
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25945
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-15
DOLE96561 ncbi Desulfococcus oleovorans Hxd35
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPHY357809 ncbi Clostridium phytofermentans ISDg4
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130324
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131295
CDIF272563 ncbi Clostridium difficile 6305
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTRI382640 ncbi Bartonella tribocorum CIP 1054765
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.4
BQUI283165 ncbi Bartonella quintana Toulouse5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLON206672 ncbi Bifidobacterium longum NCC27054
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHEN283166 ncbi Bartonella henselae Houston-15
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K165
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC360095 ncbi Bartonella bacilliformis KC5835
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
AVAR240292 ncbi Anabaena variabilis ATCC 294135
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP15
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAEO224324 ncbi Aquifex aeolicus VF55


Names of the homologs of the genes in the group in each of these orgs
  G6364   G6363   G6362   EG11734   EG10359   
ZMOB264203 ZMO0077ZMO0075ZMO0074ZMO0075ZMO1411
YPSE349747 YPSIP31758_2915YPSIP31758_2916YPSIP31758_2917YPSIP31758_2125YPSIP31758_2902
YPSE273123 YPTB1113YPTB1112YPTB1111YPTB1955YPTB1124
YPES386656 YPDSF_2632YPDSF_2633YPDSF_2634YPDSF_1165YPDSF_2620
YPES377628 YPN_1106YPN_1105YPN_1104YPN_1120
YPES360102 YPA_2477YPA_2478YPA_2479YPA_1340YPA_2463
YPES349746 YPANGOLA_A1829YPANGOLA_A1830YPANGOLA_A1832YPANGOLA_A0322
YPES214092 YPO2620YPO2619YPO2618YPO1957YPO2634
YPES187410 Y1195Y1194Y1193Y2353Y1208
YENT393305 YE2985YE2986YE2987YE2478YE2973
XORY360094 XOOORF_1940XOOORF_1939XOOORF_1937XOOORF_1939XOOORF_2975
XORY342109 XOO2606XOO2607XOO2609XOO2607XOO1909
XORY291331 XOO2766XOO2767XOO2769XOO2767XOO2027
XFAS405440 XFASM12_1947XFASM12_1948XFASM12_1949XFASM12_1948XFASM12_1516
XFAS183190 PD_1779PD_1780PD_1781PD_1780PD_1374
XFAS160492 XF0906XF0904XF0903XF0904XF2344
XCAM487884 XCC-B100_1844XCC-B100_1843XCC-B100_1841XCC-B100_1843XCC-B100_2803
XCAM316273 XCAORF_2602XCAORF_2603XCAORF_2605XCAORF_2603XCAORF_1731
XCAM314565 XC_1788XC_1787XC_1785XC_1787XC_2767
XCAM190485 XCC2328XCC2329XCC2331XCC2329XCC1470
XAXO190486 XAC2461XAC2462XAC2464XAC2462XAC1517
XAUT78245 XAUT_1810XAUT_1812XAUT_1811XAUT_1820
VVUL216895 VV1_0266VV1_0267VV1_0268VV1_0267VV1_0175
VVUL196600 VV0917VV0916VV0915VV0916VV1014
VPAR223926 VP0733VP0732VP0731VP0732VP0833
VFIS312309 VF0759VF0758VF0757VF0758VF0810
VEIS391735 VEIS_1721VEIS_4067VEIS_4066VEIS_4067VEIS_0603
VCHO345073 VC0395_A0484VC0395_A0483VC0395_A0482VC0395_A0483VC0395_A1690
VCHO VC0962VC0961VC0960VC0961VC2106
TTUR377629 TERTU_3874TERTU_3875TERTU_3876TERTU_3875TERTU_3299
TTEN273068 TTE1356TTE0970TTE0972TTE0970TTE1252
TSP1755 TETH514_1610TETH514_1340TETH514_1342TETH514_1340TETH514_1493
TPSE340099 TETH39_1173TETH39_1369TETH39_1367TETH39_1369TETH39_1056
TPET390874 TPET_0278TPET_1285TPET_1283TPET_1064
TMAR243274 TM_0653TM_1507TM_1509TM_1776
TFUS269800 TFU_0811TFU_0844TFU_0845TFU_0856
TERY203124 TERY_0377TERY_2538TERY_5027TERY_1958
TELO197221 TLR1315TLL0037TLR1585TLL0037TLL0048
TDEN292415 TBD_2706TBD_2705TBD_2704TBD_1123
TCRU317025 TCR_0473TCR_0474TCR_0475TCR_0474TCR_1405
SWOL335541 SWOL_0972SWOL_1566SWOL_1564SWOL_1566
STYP99287 STM0670STM0669STM0668STM1126STM0693
STRO369723 STROP_1442STROP_3453STROP_3452STROP_2543
SSP94122 SHEWANA3_1008SHEWANA3_1007SHEWANA3_1006SHEWANA3_1007SHEWANA3_1716
SSP644076 SCH4B_0879SCH4B_0882SCH4B_0884SCH4B_4315
SSP321332 CYB_1683CYB_2320CYB_1900CYB_2285
SSP292414 TM1040_0185TM1040_0188TM1040_0190TM1040_0928
SSP1148 SLL0996SLR2047SLR2047SLL0567
SSON300269 SSO_0615SSO_0614SSO_0613SSO_1039SSO_0637
SSED425104 SSED_3471SSED_3472SSED_3473SSED_3472SSED_2810
SSAP342451 SSP1468SSP1186SSP1185SSP1254
SPRO399741 SPRO_1220SPRO_1218SPRO_1217SPRO_2925SPRO_1236
SPEA398579 SPEA_3137SPEA_3138SPEA_3139SPEA_1796
SONE211586 SO_1181SO_1180SO_1179SO_1180SO_1937
SMEL266834 SMC01115SMC01114SMC01113SMC01114SMC02510
SMED366394 SMED_0040SMED_0041SMED_0042SMED_0041SMED_2913
SLOI323850 SHEW_2923SHEW_2924SHEW_2925SHEW_1661
SLAC55218 SL1157_0275SL1157_0273SL1157_0272SL1157_2615
SHIGELLA YLEAYBEZYBEYYBEZFUR
SHAL458817 SHAL_3222SHAL_3223SHAL_3224SHAL_3223SHAL_2482
SHAE279808 SH1620SH1346SH1345SH1418
SGLO343509 SG0811SG0810SG0809SG0810SG0861
SFLE373384 SFV_0666SFV_0667SFV_0668SFV_0667SFV_0648
SFLE198214 AAN42258.1AAN42259.1AAN42260.1AAN42648.1AAN42248.1
SEPI176280 SE_0971SE_1258SE_1257SE_1258SE_1182
SEPI176279 SERP0860SERP1138SERP1137SERP1138SERP1061
SENT454169 SEHA_C0788SEHA_C0787SEHA_C0786SEHA_C1236SEHA_C0813
SENT321314 SCH_0698SCH_0697SCH_0696SCH_1077SCH_0713
SENT295319 SPA2070SPA2071SPA2072SPA1725SPA2048
SENT220341 STY0716STY0715STY0714STY1162STY0731
SENT209261 T2203T2204T2205T1795T2182
SELO269084 SYC1731_CSYC2317_CSYC1113_DSYC0557_D
SDYS300267 SDY_0597SDY_0596SDY_0595SDY_0596SDY_0623
SDEN318161 SDEN_0815SDEN_0814SDEN_0813SDEN_1593
SDEG203122 SDE_3300SDE_3301SDE_3302SDE_3301SDE_2736
SBOY300268 SBO_0525SBO_0524SBO_0523SBO_2038SBO_0545
SBAL402882 SHEW185_3303SHEW185_3304SHEW185_3305SHEW185_3304SHEW185_2502
SBAL399599 SBAL195_3439SBAL195_3440SBAL195_3441SBAL195_3440SBAL195_2622
SAVE227882 SAV2479SAV5583SAV5584SAV5583
SAUR93062 SACOL1312SACOL1628SACOL1627SACOL1628SACOL1541
SAUR93061 SAOUHSC_01269SAOUHSC_01673SAOUHSC_01672SAOUHSC_01673SAOUHSC_01592
SAUR426430 NWMN_1201NWMN_1473NWMN_1474NWMN_1406
SAUR418127 SAHV_1282SAHV_1558SAHV_1557SAHV_1558SAHV_1486
SAUR367830 SAUSA300_1185SAUSA300_1530SAUSA300_1531SAUSA300_1448
SAUR359787 SAURJH1_1378SAURJH1_1663SAURJH1_1662SAURJH1_1663SAURJH1_1586
SAUR359786 SAURJH9_1352SAURJH9_1629SAURJH9_1628SAURJH9_1629SAURJH9_1555
SAUR282459 SAS1226SAS1508SAS1509SAS1438
SAUR282458 SAR1268SAR1648SAR1647SAR1648SAR1574
SAUR273036 SAB1154SAB1443CSAB1442CSAB1443CSAB1359C
SAUR196620 MW1175MW1523MW1522MW1523MW1452
SAUR158879 SA1134SA1400SA1399SA1400SA1329
SAUR158878 SAV1292SAV1571SAV1570SAV1571SAV1498
SARE391037 SARE_1400SARE_3832SARE_3831SARE_2730
SALA317655 SALA_2064SALA_2063SALA_2159SALA_2063SALA_2066
RSPH349102 RSPH17025_3872RSPH17025_3873RSPH17025_3874RSPH17025_3873RSPH17025_0932
RSPH349101 RSPH17029_3285RSPH17029_3284RSPH17029_3283RSPH17029_3284RSPH17029_1161
RSPH272943 RSP_3600RSP_3599RSP_3598RSP_3599RSP_2494
RSP101510 RHA1_RO06771RHA1_RO01242RHA1_RO01241RHA1_RO01222
RSOL267608 RSC0531RSC0530RSC0529RSC0530RSC2747
RRUB269796 RRU_A3770RRU_A3771RRU_A3772RRU_A3771RRU_A3767
RPOM246200 SPO_A0002SPO_A0006SPO_A0008SPO_2477
RPAL316058 RPB_0590RPB_0591RPB_0592RPB_0591RPB_0588
RPAL316057 RPD_0242RPD_0241RPD_0240RPD_0241RPD_0244
RPAL316056 RPC_0468RPC_0469RPC_0470RPC_0469RPC_0466
RPAL316055 RPE_0206RPE_0205RPE_0204RPE_0205RPE_0208
RPAL258594 RPA0448RPA0446RPA0447RPA0450
RMET266264 RMET_0453RMET_0452RMET_0451RMET_2976
RLEG216596 RL0395RL0394RL0393RL0394RL0397
RFER338969 RFER_3365RFER_0738RFER_0737RFER_0753
REUT381666 H16_A0528H16_A0527H16_A0526H16_A0527H16_A3143
REUT264198 REUT_A0514REUT_A0513REUT_A0512REUT_A2837
RETL347834 RHE_CH00376RHE_CH00375RHE_CH00374RHE_CH00375RHE_CH00378
RDEN375451 RD1_3921RD1_3920RD1_3919RD1_3140
PTHE370438 PTH_1338PTH_0890PTH_0892PTH_0890PTH_1875
PSYR223283 PSPTO_4804PSPTO_4805PSPTO_4806PSPTO_4805PSPTO_4508
PSYR205918 PSYR_4345PSYR_4346PSYR_4347PSYR_4346PSYR_4198
PSTU379731 PST_3761PST_3762PST_3763PST_3762PST_3330
PSP56811 PSYCPRWF_1875PSYCPRWF_1970PSYCPRWF_1971PSYCPRWF_1970PSYCPRWF_1885
PSP296591 BPRO_1120BPRO_4095BPRO_4096BPRO_4610
PSP117 RB9401RB4582RB4582RB8465
PPUT76869 PPUTGB1_4841PPUTGB1_4842PPUTGB1_4841PPUTGB1_4731
PPUT351746 PPUT_4663PPUT_4664PPUT_4663PPUT_4596
PPUT160488 PP_4787PP_4788PP_4787PP_4730
PPRO298386 PBPRA2878PBPRA2879PBPRA2880PBPRA2879PBPRA1035
PNAP365044 PNAP_3373PNAP_0509PNAP_0508PNAP_3791
PMUL272843 PM1001PM1046PM1045PM1046PM0352
PMEN399739 PMEN_3779PMEN_3780PMEN_3781PMEN_3780PMEN_3627
PLUM243265 PLU1312PLU1311PLU1310PLU2039PLU1327
PING357804 PING_0535PING_0534PING_0533PING_0534PING_0873
PHAL326442 PSHAA1046PSHAA1045PSHAA1044PSHAA1045PSHAA1641
PFLU220664 PFL_5432PFL_5433PFL_5434PFL_5433PFL_0824
PFLU216595 PFLU5404PFLU5405PFLU5406PFLU5405PFLU5272
PFLU205922 PFL_4950PFL_4951PFL_4952PFL_4951PFL_0760
PENT384676 PSEEN4807PSEEN4808PSEEN4807PSEEN0775
PCRY335284 PCRYO_2047PCRYO_0591PCRYO_0590PCRYO_0591PCRYO_0291
PCAR338963 PCAR_1214PCAR_1231PCAR_1233PCAR_1231PCAR_1952
PATL342610 PATL_2206PATL_2207PATL_2208PATL_2207PATL_2152
PARC259536 PSYC_1766PSYC_0627PSYC_0626PSYC_0627PSYC_0265
PAER208964 PA3980PA3981PA3982PA3981PA4764
PAER208963 PA14_12350PA14_12330PA14_12310PA14_12330PA14_63020
OIHE221109 OB1628OB1955OB1953OB1955OB1849
OCAR504832 OCAR_4521OCAR_4520OCAR_4519OCAR_4520OCAR_4522
OANT439375 OANT_0758OANT_0757OANT_0756OANT_0757OANT_1243
NWIN323098 NWI_0014NWI_0015NWI_0016NWI_0015NWI_0013
NSP35761 NOCA_3847NOCA_1912NOCA_1913NOCA_1934
NSP103690 ALR1312ALR1956ALL0271ALR1956ALL1691
NOCE323261 NOC_0237NOC_0238NOC_0239NOC_0238NOC_1194
NMUL323848 NMUL_A2692NMUL_A2696NMUL_A2697NMUL_A0475
NMEN374833 NMCC_0355NMCC_0804NMCC_0479NMCC_0804NMCC_1944
NMEN272831 NMC0353NMC0784NMC0477NMC0784NMC0197
NMEN122587 NMA0590NMA1056NMA0717NMA1056NMA0064
NMEN122586 NMB_1866NMB_0845NMB_0538NMB_0845NMB_0205
NHAM323097 NHAM_0021NHAM_0022NHAM_0023NHAM_0022NHAM_0020
NGON242231 NGO0037NGO0417NGO0145NGO1779
NFAR247156 NFA38350NFA14320NFA14330NFA14320NFA14570
NEUT335283 NEUT_1789NEUT_1788NEUT_1787NEUT_1938
NEUR228410 NE2335NE2334NE2333NE0616
NARO279238 SARO_0982SARO_0981SARO_0980SARO_0981SARO_0984
MXAN246197 MXAN_3784MXAN_4738MXAN_4736MXAN_4738MXAN_3702
MVAN350058 MVAN_2429MVAN_3832MVAN_3831MVAN_3832MVAN_3820
MTUB419947 MRA_2759MRA_2392MRA_2391MRA_2392MRA_2383
MTUB336982 TBFG_12746TBFG_12394TBFG_12393TBFG_12394TBFG_12385
MTHE264732 MOTH_1112MOTH_0593MOTH_0595MOTH_1147
MTBRV RV2733CRV2368CRV2367CRV2368CRV2359
MTBCDC MT2803MT2437MT2436MT2437MT2428
MSUC221988 MS1690MS1682MS1680MS1682MS0859
MSP409 M446_3182M446_3181M446_3180M446_3181
MSP400668 MMWYL1_2909MMWYL1_2910MMWYL1_2911MMWYL1_2910MMWYL1_3967
MSP266779 MESO_3919MESO_3920MESO_3921MESO_3920MESO_3947
MSP189918 MKMS_2203MKMS_3519MKMS_3518MKMS_3519MKMS_3510
MSP164757 MJLS_2144MJLS_3467MJLS_3466MJLS_3467MJLS_3458
MSP164756 MMCS_2157MMCS_3456MMCS_3455MMCS_3456MMCS_3447
MSME246196 MSMEG_2729MSMEG_4497MSMEG_4496MSMEG_4497MSMEG_4487
MPET420662 MPE_A0532MPE_A3239MPE_A3240MPE_A3239MPE_A0223
MMAR394221 MMAR10_3033MMAR10_3035MMAR10_3034MMAR10_3031
MMAG342108 AMB4463AMB4464AMB4465AMB4464AMB4460
MLOT266835 MLR5534MLR5535MLR5536MLR5535
MLEP272631 ML0989ML0627ML0628ML0627ML0824
MGIL350054 MFLV_3967MFLV_2706MFLV_2707MFLV_2717
MFLA265072 MFLA_0651MFLA_0650MFLA_0649MFLA_0650MFLA_0127
MEXT419610 MEXT_3204MEXT_3205MEXT_3206MEXT_3205
MCAP243233 MCA_1459MCA_1458MCA_1457MCA_1458MCA_2623
MBOV410289 BCG_2746CBCG_2382CBCG_2381CBCG_2382CBCG_2373
MBOV233413 MB2752CMB2389CMB2388CMB2389CMB2380
MAVI243243 MAV_3625MAV_2025MAV_2025MAV_2036
MAQU351348 MAQU_2738MAQU_2739MAQU_2740MAQU_2739MAQU_3365
MAER449447 MAE_47970MAE_43330MAE_43330MAE_37080
LSPH444177 BSPH_1652BSPH_3716BSPH_3714BSPH_3716BSPH_1708
LPNE400673 LPC_0750LPC_0857LPC_0856LPC_0857LPC_2972
LPNE297246 LPP1288LPP1396LPP1395LPP1396LPP0438
LPNE297245 LPL1287LPL1600LPL1601LPL1600LPL0414
LPNE272624 LPG1334LPG1441LPG1440LPG1441
LCHO395495 LCHO_0584LCHO_3950LCHO_3949LCHO_0474
KRAD266940 KRAD_1499KRAD_3387KRAD_3386KRAD_3387KRAD_3370
KPNE272620 GKPORF_B5110GKPORF_B5109GKPORF_B5108GKPORF_B5488.3GKPORF_B5134
JSP375286 MMA_0431MMA_0430MMA_0429MMA_0430MMA_2891
JSP290400 JANN_0697JANN_0700JANN_0703JANN_0700JANN_1799
ILOI283942 IL0941IL0942IL0943IL0942IL1476
HSOM228400 HSM_1572HSM_0614HSM_0615HSM_0614HSM_0352
HSOM205914 HS_1155HS_0345HS_0346HS_0345HS_1211
HMOD498761 HM1_2446HM1_2448HM1_2446HM1_2550
HHAL349124 HHAL_0893HHAL_0892HHAL_0891HHAL_0892HHAL_1481
HCHE349521 HCH_05348HCH_05349HCH_05350HCH_05349HCH_01221
HARS204773 HEAR0381HEAR0380HEAR0379HEAR0380HEAR2655
GVIO251221 GLR4015GLL3611GLL1243GLL3611
GTHE420246 GTNG_1157GTNG_2430GTNG_2428GTNG_2430GTNG_2248
GOXY290633 GOX2009GOX2007GOX2008GOX0771
GKAU235909 GK1303GK2493GK2491GK2493GK2317
GBET391165 GBCGDNIH1_0118GBCGDNIH1_0117GBCGDNIH1_0116GBCGDNIH1_0117GBCGDNIH1_0390
FTUL458234 FTA_0937FTA_0936FTA_0935FTA_0936FTA_1939
FTUL418136 FTW_1110FTW_1111FTW_1112FTW_1111FTW_0105
FTUL401614 FTN_1063FTN_1064FTN_1065FTN_1064FTN_1681
FTUL393115 FTF0618CFTF0617CFTF0616CFTF0617CFTF0030C
FTUL393011 FTH_0872FTH_0871FTH_0870FTH_0871FTH_1767
FTUL351581 FTL_0886FTL_0885FTL_0884FTL_0885FTL_1831
FRANT YLEAPHOHFT.0617CPHOHFUR
FPHI484022 FPHI_0023FPHI_0024FPHI_0025FPHI_0928
FMAG334413 FMG_0732FMG_0733FMG_0732FMG_0630
ESP42895 ENT638_1187ENT638_1186ENT638_1185ENT638_1548ENT638_1198
ELIT314225 ELI_08495ELI_08500ELI_08505ELI_08500ELI_08485
EFER585054 EFER_2441EFER_2442EFER_2443EFER_1908EFER_2426
EFAE226185 EF_2414EF_2412EF_2414EF_1585
ECOO157 YLEAYBEZYBEYPHOHFUR
ECOL83334 ECS0699ECS0698ECS0697ECS1266ECS0714
ECOL585397 ECED1_0652ECED1_0651ECED1_0650ECED1_1175ECED1_0664
ECOL585057 ECIAI39_0628ECIAI39_0627ECIAI39_0626ECIAI39_2136ECIAI39_0640
ECOL585056 ECUMN_0754ECUMN_0753ECUMN_0752ECUMN_1205ECUMN_0768
ECOL585055 EC55989_0656EC55989_0655EC55989_0654EC55989_1131EC55989_0669
ECOL585035 ECS88_0696ECS88_0695ECS88_0694ECS88_1036ECS88_0719
ECOL585034 ECIAI1_0645ECIAI1_0644ECIAI1_0643ECIAI1_1065ECIAI1_0661
ECOL481805 ECOLC_2984ECOLC_2985ECOLC_2986ECOLC_2576ECOLC_2973
ECOL469008 ECBD_2990ECBD_2991ECBD_2992ECBD_2574ECBD_2978
ECOL439855 ECSMS35_0684ECSMS35_0682ECSMS35_0681ECSMS35_2103ECSMS35_0705
ECOL413997 ECB_00629ECB_00628ECB_00627ECB_01022ECB_00640
ECOL409438 ECSE_0732ECSE_0731ECSE_0730ECSE_1085ECSE_0745
ECOL405955 APECO1_1402APECO1_1403APECO1_1404APECO1_111APECO1_1381
ECOL364106 UTI89_C0659UTI89_C0658UTI89_C0657UTI89_C1083UTI89_C0687
ECOL362663 ECP_0684ECP_0683ECP_0682ECP_1019ECP_0703
ECOL331111 ECE24377A_0690ECE24377A_0689ECE24377A_0688ECE24377A_0689ECE24377A_0711
ECOL316407 ECK0653:JW0658:B0661ECK0652:JW0657:B0660ECK0651:JW0656:B0659ECK1010:JW1005:B1020ECK0671:JW0669:B0683
ECOL199310 C0747C0745C0744C1159C0770
ECAR218491 ECA1319ECA1318ECA1317ECA1741ECA1329
DSHI398580 DSHI_1019DSHI_1016DSHI_1015DSHI_2142
DRED349161 DRED_1889DRED_2484DRED_2482DRED_2484DRED_0650
DOLE96561 DOLE_2355DOLE_0779DOLE_0777DOLE_0779DOLE_0342
DNOD246195 DNO_1245DNO_1244DNO_1243DNO_1244DNO_0877
DHAF138119 DSY1595DSY3111DSY3109DSY3111DSY1827
DARO159087 DARO_3527DARO_3528DARO_3529DARO_3528DARO_0934
CVIO243365 CV_4149CV_4151CV_4152CV_1797
CSP78 CAUL_0021CAUL_0023CAUL_3741CAUL_0013
CSP501479 CSE45_2812CSE45_2809CSE45_2808CSE45_3073
CSAL290398 CSAL_2334CSAL_2335CSAL_2336CSAL_2335CSAL_3097
CPSY167879 CPS_3572CPS_3573CPS_3574CPS_3573CPS_1575
CPHY357809 CPHY_2599CPHY_2611CPHY_2611CPHY_2295
CJAP155077 CJA_1640CJA_1638CJA_1637CJA_1389CJA_3352
CHYD246194 CHY_1398CHY_0425CHY_0427CHY_0425CHY_2099
CGLU196627 CG2135CG2513CG2512CG2502
CDIP257309 DIP1448DIP1718DIP1717DIP1718DIP1710
CDIF272563 CD1986CD2441ACD2440CD2441ACD1287
CDES477974 DAUD_0549DAUD_2048DAUD_2046DAUD_2048
CBUR434922 COXBU7E912_1494COXBU7E912_1495COXBU7E912_1496COXBU7E912_1495COXBU7E912_1389
CBUR360115 COXBURSA331_A0683COXBURSA331_A0682COXBURSA331_A0681COXBURSA331_A0682COXBURSA331_A1451
CBUR227377 CBU_0569CBU_0568CBU_0567CBU_0568CBU_1301
BWEI315730 BCERKBAB4_3543BCERKBAB4_4156BCERKBAB4_4154BCERKBAB4_4156BCERKBAB4_3922
BVIE269482 BCEP1808_2795BCEP1808_2796BCEP1808_2797BCEP1808_2796BCEP1808_0617
BTRI382640 BT_0250BT_0249BT_0248BT_0249BT_0216
BTHU412694 BALH_3400BALH_3896BALH_3893BALH_3709
BTHU281309 BT9727_3513BT9727_4042BT9727_4040BT9727_3832
BTHA271848 BTH_I0591BTH_I0590BTH_I0589BTH_I0590BTH_I1206
BSUI470137 BSUIS_A1991BSUIS_A1992BSUIS_A1993BSUIS_A1992BSUIS_B1133
BSUI204722 BR_2153BR_2155BR_2156BR_2155BR_1654
BSUB BSU17010BSU25340BSU25320BSU25340BSU23520
BSP376 BRADO0041BRADO0042BRADO0043BRADO0042BRADO0039
BSP36773 BCEP18194_A6021BCEP18194_A6022BCEP18194_A6023BCEP18194_A3735
BQUI283165 BQ02140BQ02130BQ02120BQ02130BQ01860
BPUM315750 BPUM_1605BPUM_2266BPUM_2264BPUM_2266BPUM_2084
BPSE320373 BURPS668_0710BURPS668_0709BURPS668_0706BURPS668_0709BURPS668_3420
BPSE320372 BURPS1710B_A0935BURPS1710B_A0934BURPS1710B_A0932BURPS1710B_A0934BURPS1710B_A3733
BPSE272560 BPSL0674BPSL0673BPSL0672BPSL0673BPSL2943
BPET94624 BPET3654BPET3655BPET3656BPET3655BPET1549
BPER257313 BP1041BP1040BP1039BP1040BP2507
BPAR257311 BPP1141BPP1140BPP1139BPP1140BPP3494
BOVI236 GBOORF2144GBOORF2145GBOORF2146GBOORF2145GBOORF1665
BMEL359391 BAB1_2154BAB1_2155BAB1_2156BAB1_2155BAB1_1668
BMEL224914 BMEI1976BMEI1975BMEI1974BMEI1975BMEI0375
BMAL320389 BMA10247_2438BMA10247_2437BMA10247_2435BMA10247_2437BMA10247_2645
BMAL320388 BMASAVP1_A2720BMASAVP1_A2721BMASAVP1_A2723BMASAVP1_A2721BMASAVP1_A0375
BMAL243160 BMA_0226BMA_0225BMA_0223BMA_0225BMA_2458
BLON206672 BL1408BL0861BL0862BL1128
BLIC279010 BL03660BL03669BL03671BL03669BL05249
BJAP224911 BLL0795BLL0794BLL0793BLL0794BLL0797
BHEN283166 BH02260BH02250BH02240BH02250BH01980
BHAL272558 BH2372BH1361BH1363BH1361BH1527
BCLA66692 ABC2190ABC1676ABC1678ABC1676ABC1780
BCER572264 BCA_3869BCA_4416BCA_4414BCA_4416BCA_4203
BCER405917 BCE_3806BCE_4385BCE_4383BCE_4385BCE_4160
BCER315749 BCER98_2424BCER98_3031BCER98_3029BCER98_3031BCER98_2790
BCER288681 BCE33L3531BCE33L4052BCE33L4050BCE33L3848
BCER226900 BC_3772BC_4302BC_4300BC_4302BC_4091
BCEN331272 BCEN2424_2693BCEN2424_2694BCEN2424_2695BCEN2424_0649
BCEN331271 BCEN_2081BCEN_2082BCEN_2083BCEN_0166
BCAN483179 BCAN_A2196BCAN_A2197BCAN_A2198BCAN_A2197BCAN_A1696
BBRO257310 BB1357BB1356BB1355BB1356BB3942
BBAC360095 BARBAKC583_1243BARBAKC583_1244BARBAKC583_1245BARBAKC583_1244BARBAKC583_0360
BANT592021 BAA_3933BAA_4549BAA_4547BAA_4549BAA_4334
BANT568206 BAMEG_0723BAMEG_4567BAMEG_4565BAMEG_4567BAMEG_4352
BANT261594 GBAA3908GBAA4529GBAA4527GBAA4529GBAA4313
BANT260799 BAS3621BAS4204BAS4202BAS4204BAS4001
BAMY326423 RBAM_016850RBAM_023640RBAM_023620RBAM_023640RBAM_021640
BAMB398577 BAMMC406_2610BAMMC406_2611BAMMC406_2612BAMMC406_2611BAMMC406_0570
BAMB339670 BAMB_2746BAMB_2747BAMB_2748BAMB_2747BAMB_0544
BABO262698 BRUAB1_2127BRUAB1_2128BRUAB1_2129BRUAB1_2128BRUAB1_1641
AVAR240292 AVA_3037AVA_4354AVA_2782AVA_4354AVA_1165
ASP76114 EBA1339EBA1337EBA1336EBA1337EBB167
ASP62977 ACIAD3158ACIAD3159ACIAD3160ACIAD3159ACIAD0910
ASP62928 AZO0778AZO0779AZO0780AZO0779AZO2578
ASP232721 AJS_3625AJS_3701AJS_3702AJS_3701AJS_3924
ASAL382245 ASA_1074ASA_1073ASA_1072ASA_1073ASA_2824
APLE434271 APJL_1339APJL_0339APJL_0692APJL_0339APJL_1231
APLE416269 APL_1325APL_0324APL_0694APL_0324APL_1218
AORE350688 CLOS_1555CLOS_1246CLOS_1248CLOS_1246CLOS_1661
AMET293826 AMET_2545AMET_3033AMET_3031AMET_3033AMET_2466
AMAR329726 AM1_4660AM1_1432AM1_4100AM1_2111
AHYD196024 AHA_3241AHA_3242AHA_3243AHA_3242AHA_1530
AFER243159 AFE_2444AFE_2443AFE_2442AFE_2443AFE_2747
AEHR187272 MLG_0394MLG_0395MLG_0396MLG_0395MLG_1905
ADEH290397 ADEH_2355ADEH_2721ADEH_2719ADEH_2721ADEH_1564
ACRY349163 ACRY_1353ACRY_1354ACRY_1354ACRY_1334
ACAU438753 AZC_0008AZC_0010AZC_0009AZC_0006
ABOR393595 ABO_1934ABO_1935ABO_1936ABO_1935ABO_0309
ABAU360910 BAV0835BAV0836BAV0837BAV0836BAV2724
AAVE397945 AAVE_0875AAVE_4241AAVE_4242AAVE_4241AAVE_4555
AAEO224324 AQ_284AQ_1351AQ_1354AQ_1351AQ_1418


Organism features enriched in list (features available for 312 out of the 333 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00009883392
Arrangment:Clusters 0.00001971717
Arrangment:Pairs 0.001005574112
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00094871111
Endospores:No 2.728e-1077211
GC_Content_Range4:0-40 2.324e-2357213
GC_Content_Range4:40-60 0.0000135144224
GC_Content_Range4:60-100 3.853e-11111145
GC_Content_Range7:0-30 1.458e-15147
GC_Content_Range7:30-40 7.930e-1056166
GC_Content_Range7:50-60 3.897e-780107
GC_Content_Range7:60-70 6.069e-13107134
Genome_Size_Range5:0-2 1.409e-4015155
Genome_Size_Range5:4-6 1.674e-27157184
Genome_Size_Range5:6-10 1.854e-64047
Genome_Size_Range9:1-2 8.316e-2915128
Genome_Size_Range9:4-5 2.245e-118096
Genome_Size_Range9:5-6 2.523e-137788
Genome_Size_Range9:6-8 1.050e-63438
Gram_Stain:Gram_Neg 1.107e-10216333
Habitat:Multiple 0.0051377108178
Habitat:Specialized 0.00053171753
Habitat:Terrestrial 0.00315582431
Motility:No 0.000258463151
Motility:Yes 4.838e-7172267
Optimal_temp.:25-30 5.335e-61919
Optimal_temp.:37 0.003600845106
Oxygen_Req:Aerobic 3.062e-6124185
Oxygen_Req:Anaerobic 2.056e-1223102
Oxygen_Req:Facultative 0.0002139127201
Oxygen_Req:Microaerophilic 0.0050154418
Pathogenic_in:Animal 0.00037034866
Shape:Coccobacillus 0.00094871111
Shape:Rod 7.491e-18236347
Shape:Sphere 0.0005985319
Shape:Spiral 1.500e-6534
Temp._range:Hyperthermophilic 0.0012797523
Temp._range:Mesophilic 0.0059952264473
Temp._range:Thermophilic 0.00133111035



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 124
Effective number of orgs (counting one per cluster within 468 clusters): 111

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP64471 ncbi Synechococcus sp. CC93111
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP357808 ncbi Roseiflexus sp. RS-11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96011
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GFOR411154 ncbi Gramella forsetii KT08030
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FSP1855 Frankia sp. EAN1pec1
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.921
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  G6364   G6363   G6362   EG11734   EG10359   
UURE95667
UURE95664 UUR10_0561
UPAR505682
UMET351160
TVOL273116
TROS309801 TRD_0354
TPEN368408
TPAL243276
TLET416591 TLET_1972
TKOD69014
TDEN243275 TDE_1240
TACI273075
STOK273063
SSP64471 GSYN0812
SSOL273057
SPYO370553
SMAR399550
SACI330779
RSP357808 ROSERS_3596
RSAL288705 RSAL33209_1921
RCAS383372 RCAS_4283
RALB246199 GRAORF_0928
PTOR263820
PRUM264731 GFRORF0724
PMOB403833 PMOB_0846
PMAR59920 PMN2A_0851
PMAR167555 NATL1_17041
PMAR167540 PMM1284
PMAR167539 PRO_1358
PMAR146891 A9601_14831
PLUT319225 PLUT_1209
PISL384616
PINT246198 PIN_A1771
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
NPHA348780
MTHE349307
MTHE187420
MSYN262723 MS53_0389
MSTA339860
MSED399549
MPUL272635
MPNE272634
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LINT363253
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0397
HPYL357544 HPAG1_0420
HPY HP1027
HMUK485914
HMAR272569
HHEP235279 HH_0893
HBUT415426
HAUR316274
HACI382638 HAC_1131
GFOR411154
FSUC59374 FSU0973
FSP1855 FRANEAN1_2112
FJOH376686
DSP255470
DSP216389
DGEO319795 DGEO_1272
DETH243164 DET_1147
CTRA471473
CTRA471472
CTEP194439 CT_1259
CSUL444179
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CHOM360107 CHAB381_1645
CFET360106 CFF8240_1143
CFEL264202
CCUR360105 CCV52592_2147
CCHL340177 CAG_1083
CCAV227941
CABO218497
BXEN266265
BTUR314724
BHER314723
BGAR290434
BBUR224326
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667 ARTH_2232
APER272557
ALAI441768 ACL_0950
AFUL224325


Organism features enriched in list (features available for 115 out of the 124 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.002370169
Arrangment:Chains 0.0000260592
Arrangment:Pairs 0.00012869112
Arrangment:Singles 0.004557768286
Disease:Pharyngitis 1.875e-688
Disease:bronchitis_and_pneumonitis 1.875e-688
Endospores:No 2.964e-1071211
GC_Content_Range4:0-40 0.000513157213
GC_Content_Range4:60-100 0.000012912145
GC_Content_Range7:0-30 0.00036591947
GC_Content_Range7:60-70 0.000087912134
Genome_Size_Range5:0-2 2.986e-2173155
Genome_Size_Range5:4-6 4.100e-146184
Genome_Size_Range5:6-10 0.0063998347
Genome_Size_Range9:0-1 5.558e-81827
Genome_Size_Range9:1-2 1.892e-1255128
Genome_Size_Range9:4-5 3.110e-7396
Genome_Size_Range9:5-6 1.891e-6388
Genome_Size_Range9:6-8 0.0085762238
Gram_Stain:Gram_Neg 0.001389252333
Gram_Stain:Gram_Pos 4.383e-115150
Habitat:Aquatic 0.00107772991
Habitat:Multiple 6.286e-1010178
Habitat:Specialized 1.373e-62553
Habitat:Terrestrial 0.0073093131
Optimal_temp.:- 0.002356938257
Optimal_temp.:100 0.007514733
Optimal_temp.:35-40 0.007514733
Optimal_temp.:37 0.005966230106
Optimal_temp.:85 0.001451144
Oxygen_Req:Aerobic 0.000364922185
Oxygen_Req:Anaerobic 9.555e-1044102
Oxygen_Req:Facultative 0.000189724201
Pathogenic_in:Human 0.000372927213
Pathogenic_in:No 0.004509456226
Salinity:Extreme_halophilic 0.003828557
Shape:Irregular_coccus 3.782e-131717
Shape:Pleomorphic 0.008259658
Shape:Rod 1.212e-1432347
Shape:Sphere 2.193e-81519
Shape:Spiral 0.00179871434
Temp._range:Hyperthermophilic 8.560e-101823
Temp._range:Mesophilic 7.244e-676473
Temp._range:Thermophilic 0.00077211535



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
MLEP272631 ncbi Mycobacterium leprae TN 0.00401224745


Names of the homologs of the genes in the group in each of these orgs
  G6364   G6363   G6362   EG11734   EG10359   
MLEP272631 ML0989ML0627ML0628ML0627ML0824


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Leprosy 0.001715311



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-4041 (γ-glutamyl cycle)2792430.6075
GLYCOCAT-PWY (glycogen degradation I)2462180.5695
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392680.5608
PWY-5918 (heme biosynthesis I)2722250.5166
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4583150.5119
PWY-5340 (sulfate activation for sulfonation)3852820.5048
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951760.4981
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652710.4959
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862290.4916
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112420.4876
PANTO-PWY (pantothenate biosynthesis I)4723170.4859
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222960.4849
VALDEG-PWY (valine degradation I)2902300.4838
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491430.4780
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982840.4774
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262480.4752
PWY-5148 (acyl-CoA hydrolysis)2271920.4725
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292490.4715
TYRFUMCAT-PWY (tyrosine degradation I)1841650.4701
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912280.4673
ACETATEUTIL-PWY (superpathway of acetate utilization and formation)2371970.4661
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962300.4626
P344-PWY (acrylonitrile degradation)2101800.4612
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831630.4605
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2892250.4551
ARO-PWY (chorismate biosynthesis I)5103270.4543
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911670.4530
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002300.4485
PWY-5028 (histidine degradation II)1301260.4475
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2492010.4461
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2492010.4461
PWY0-501 (lipoate biosynthesis and incorporation I)3852730.4451
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902240.4451
PWY0-381 (glycerol degradation I)4172870.4385
GLUCONSUPER-PWY (D-gluconate degradation)2291880.4378
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))5053230.4359
FAO-PWY (fatty acid β-oxidation I)4573040.4347
PWY-5938 ((R)-acetoin biosynthesis I)3762670.4343
PWY0-1313 (acetate conversion to acetyl-CoA)3852710.4319
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552020.4300
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181800.4283
PWY-6317 (galactose degradation I (Leloir pathway))4643060.4280
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251840.4270
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002260.4228
PWY-6389 ((S)-acetoin biosynthesis)3682610.4208
PROUT-PWY (proline degradation)2542000.4206
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351260.4205
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381280.4203
PROSYN-PWY (proline biosynthesis I)4753090.4167
SER-GLYSYN-PWY (superpathway of serine and glycine biosynthesis I)5043200.4143
PWY-5913 (TCA cycle variation IV)3012250.4129
THISYN-PWY (thiamin biosynthesis I)5023190.4122
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3832670.4118
PWY-5188 (tetrapyrrole biosynthesis I)4392930.4116
IDNCAT-PWY (L-idonate degradation)2461940.4115
PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)5193250.4107
PWY-5686 (uridine-5'-phosphate biosynthesis)5263270.4069
GLYOXYLATE-BYPASS (glyoxylate cycle)1691460.4029
PWY-5703 (urea degradation I)1851560.4023
PWY-5194 (siroheme biosynthesis)3122290.4005



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6363   G6362   EG11734   EG10359   
G63640.9998860.9998630.9998140.998743
G63630.9999930.999990.998916
G63620.9999640.998889
EG117340.998677
EG10359



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PAIRWISE BLAST SCORES:

  G6364   G6363   G6362   EG11734   EG10359   
G63640.0f0----
G6363-0.0f0---
G6362--0.0f0--
EG11734-6.2e-42-0.0f0-
EG10359----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6362 G6363 G6364 (centered at G6363)
EG11734 (centered at EG11734)
EG10359 (centered at EG10359)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6364   G6363   G6362   EG11734   EG10359   
418/623411/623417/623366/623393/623
AAEO224324:0:Tyes0750751750799
AAUR290340:2:Tyes-10--
AAVE397945:0:Tyes03308330933083619
ABAC204669:0:Tyes01680-1680-
ABAU360910:0:Tyes01211890
ABOR393595:0:Tyes16631664166516640
ABUT367737:0:Tyes--0-887
ACAU438753:0:Tyes2-430
ACEL351607:0:Tyes69801--
ACRY349163:8:Tyes1920-200
ADEH290397:0:Tyes7991172117011720
AEHR187272:0:Tyes01211501
AFER243159:0:Tyes2101300
AHYD196024:0:Tyes16651666166716660
ALAI441768:0:Tyes--0--
AMAR234826:0:Tyes0-626--
AMAR329726:9:Tyes3202-02644670
AMET293826:0:Tyes785565545560
ANAE240017:0:Tyes0128---
AORE350688:0:Tyes307020410
APHA212042:0:Tyes0-375--
APLE416269:0:Tyes100303680893
APLE434271:0:Tno98603330871
ASAL382245:5:Tyes21011686
ASP1667:3:Tyes-0---
ASP232721:2:Tyes0757675309
ASP62928:0:Tyes01211837
ASP62977:0:Tyes20882089209020890
ASP76114:2:Tyes21012032
AVAR240292:3:Tyes18763194162131940
BABO262698:1:Tno4694704714700
BAMB339670:3:Tno22562257225822570
BAMB398577:3:Tno20682069207020690
BAMY326423:0:Tyes0678676678478
BANT260799:0:Tno0578576578376
BANT261594:2:Tno0595593595390
BANT568206:2:Tyes03761375937613550
BANT592021:2:Tno0603601603392
BAPH198804:0:Tyes0-1--
BAPH372461:0:Tyes0-1--
BBAC264462:0:Tyes569-0-898
BBAC360095:0:Tyes8168178188170
BBRO257310:0:Tyes21012611
BCAN483179:1:Tno4854864874860
BCEN331271:2:Tno194119421943-0
BCEN331272:3:Tyes204120422043-0
BCER226900:1:Tyes0520518520314
BCER288681:0:Tno0519517-315
BCER315749:1:Tyes0597595597363
BCER405917:1:Tyes0557555557341
BCER572264:1:Tno0533531533324
BCIC186490:0:Tyes1-0--
BCLA66692:0:Tyes519020109
BFRA272559:1:Tyes0--779-
BFRA295405:0:Tno0--904-
BHAL272558:0:Tyes1015020170
BHEN283166:0:Tyes282726270
BJAP224911:0:Fyes21014
BLIC279010:0:Tyes0774772774562
BLON206672:0:Tyes558-01270
BMAL243160:1:Tno32021990
BMAL320388:1:Tno22902291229322910
BMAL320389:1:Tyes3202210
BMEL224914:1:Tno16371636163516360
BMEL359391:1:Tno4554564574560
BOVI236:1:Tyes4264274284270
BPAR257311:0:Tno21012230
BPER257313:0:Tyes21011329
BPET94624:0:Tyes21372138213921380
BPSE272560:1:Tyes21012286
BPSE320372:1:Tno32022677
BPSE320373:1:Tno43032616
BPUM315750:0:Tyes0651649651469
BQUI283165:0:Tyes282726270
BSP107806:2:Tyes0-1--
BSP36773:2:Tyes232923302331-0
BSP376:0:Tyes23430
BSUB:0:Tyes0870868870683
BSUI204722:1:Tyes4824844854840
BSUI470137:0:Tno----0
BSUI470137:1:Tno0121-
BTHA271848:1:Tno2101608
BTHE226186:0:Tyes0--1037-
BTHU281309:1:Tno0527525-318
BTHU412694:1:Tno0482480-301
BTRI382640:1:Tyes302928290
BVIE269482:7:Tyes21572158215921580
BWEI315730:4:Tyes0602600602374
CACE272562:1:Tyes154---0
CAULO:0:Tyes--026333
CBEI290402:0:Tyes1422---0
CBLO203907:0:Tyes-10--
CBLO291272:0:Tno-10--
CBOT36826:1:Tno0---764
CBOT441770:0:Tyes0---745
CBOT441771:0:Tno0---667
CBOT441772:1:Tno0---803
CBOT498213:1:Tno0---825
CBOT508765:1:Tyes624---0
CBOT515621:2:Tyes0---801
CBOT536232:0:Tno0---886
CBUR227377:1:Tyes2101698
CBUR360115:1:Tno2101712
CBUR434922:2:Tno1011021031020
CCHL340177:0:Tyes-0---
CCON360104:2:Tyes--0-1132
CCUR360105:0:Tyes----0
CDES477974:0:Tyes0148414821484-
CDIF272563:1:Tyes7101173117211730
CDIP257309:0:Tyes0263262263255
CEFF196164:0:Fyes0347346--
CFET360106:0:Tyes----0
CGLU196627:0:Tyes0345344-337
CHOM360107:1:Tyes----0
CHUT269798:0:Tyes0--1124-
CHYD246194:0:Tyes9480201636
CJAP155077:0:Tyes24324124001933
CJEI306537:0:Tyes5330-0-
CJEJ192222:0:Tyes--0-258
CJEJ195099:0:Tno--0-328
CJEJ354242:2:Tyes--0-263
CJEJ360109:0:Tyes--0-1330
CJEJ407148:0:Tno--0-262
CKLU431943:1:Tyes245---0
CMIC31964:2:Tyes0508507--
CMIC443906:2:Tyes46701--
CNOV386415:0:Tyes0---172
CPEL335992:0:Tyes1--20
CPER195102:1:Tyes0---684
CPER195103:0:Tno0---668
CPER289380:3:Tyes0---582
CPHY357809:0:Tyes304316-3160
CPSY167879:0:Tyes19241925192619250
CRUT413404:0:Tyes575-0-565
CSAL290398:0:Tyes0121766
CSP501479:7:Fyes----0
CSP501479:8:Fyes410--
CSP78:2:Tyes8-1037680
CTEP194439:0:Tyes-0---
CTET212717:0:Tyes229---0
CVES412965:0:Tyes541-0-531
CVIO243365:0:Tyes241424162417-0
DARO159087:0:Tyes26052606260726060
DDES207559:0:Tyes-0--1045
DETH243164:0:Tyes----0
DGEO319795:1:Tyes-0---
DHAF138119:0:Tyes0152815261528234
DNOD246195:0:Tyes3473463453460
DOLE96561:0:Tyes20374524504520
DPSY177439:2:Tyes3320-0-
DRAD243230:3:Tyes-0101--
DRED349161:0:Tyes12361836183418360
DSHI398580:5:Tyes410-1144
DVUL882:1:Tyes-935--0
ECAN269484:0:Tyes0-680--
ECAR218491:0:Tyes21042918
ECHA205920:0:Tyes0-306--
ECOL199310:0:Tno31041026
ECOL316407:0:Tno21036020
ECOL331111:6:Tno310117
ECOL362663:0:Tno21033624
ECOL364106:1:Tno21042630
ECOL405955:2:Tyes21035823
ECOL409438:6:Tyes21037122
ECOL413997:0:Tno21041020
ECOL439855:4:Tno310138117
ECOL469008:0:Tno4214224230402
ECOL481805:0:Tno4184194200400
ECOL585034:0:Tno21042822
ECOL585035:0:Tno21033928
ECOL585055:0:Tno21048220
ECOL585056:2:Tno21046722
ECOL585057:0:Tno210151221
ECOL585397:0:Tno21053220
ECOL83334:0:Tno21059124
ECOLI:0:Tno21036320
ECOO157:0:Tno21066521
EFAE226185:3:Tyes-7667647660
EFER585054:1:Tyes5425435440522
ELIT314225:0:Tyes23430
ERUM254945:0:Tyes0-689--
ERUM302409:0:Tno0-683--
ESP42895:1:Tyes21037520
FALN326424:0:Tyes36250---
FMAG334413:1:Tyes-1091101090
FNOD381764:0:Tyes-0-0-
FNUC190304:0:Tyes0-271--
FPHI484022:1:Tyes012-929
FRANT:0:Tno5515505495500
FSP106370:0:Tyes-01--
FSP1855:0:Tyes-0---
FSUC59374:0:Tyes--0--
FTUL351581:0:Tno2101844
FTUL393011:0:Tno2101748
FTUL393115:0:Tyes5425415405410
FTUL401614:0:Tyes0121613
FTUL418136:0:Tno8678688698680
FTUL458234:0:Tno2101761
GBET391165:0:Tyes2101274
GKAU235909:1:Tyes01210120812101034
GMET269799:1:Tyes0---149
GOXY290633:5:Tyes1229-122712280
GSUL243231:0:Tyes815---0
GTHE420246:1:Tyes01244124212441066
GURA351605:0:Tyes1338-0-1223
GVIO251221:0:Tyes2809240202402-
HACI382638:1:Tyes----0
HARS204773:0:Tyes21012143
HCHE349521:0:Tyes39753976397739760
HDUC233412:0:Tyes0-1019-133
HHAL349124:0:Tyes2101588
HHEP235279:0:Tyes----0
HINF281310:0:Tyes14-0-254
HINF374930:0:Tyes155-170-0
HINF71421:0:Tno15-0-179
HMOD498761:0:Tyes-020103
HNEP81032:0:Tyes0-2-421
HPY:0:Tno----0
HPYL357544:1:Tyes----0
HPYL85963:0:Tno----0
HSOM205914:1:Tyes813010869
HSOM228400:0:Tno12352682692680
ILOI283942:0:Tyes0121553
JSP290400:1:Tyes03631108
JSP375286:0:Tyes21012498
KPNE272620:2:Tyes21037119
KRAD266940:2:Fyes02665266626652682
LACI272621:0:Tyes-101-
LBIF355278:2:Tyes0-274-495
LBIF456481:2:Tno0-278-511
LBOR355276:1:Tyes0---1231
LBOR355277:1:Tno24---0
LBRE387344:2:Tyes-0-0-
LCAS321967:1:Tyes-101-
LCHO395495:0:Tyes11035053504-0
LDEL321956:0:Tyes-101-
LDEL390333:0:Tyes-101-
LGAS324831:0:Tyes-0-0-
LHEL405566:0:Tyes-101-
LINN272626:1:Tno-0-0592
LINT189518:1:Tyes0---2004
LINT267671:1:Tno1532--10730
LJOH257314:0:Tyes-101-
LLAC272622:5:Tyes-020-
LLAC272623:0:Tyes-020-
LMES203120:1:Tyes-010-
LMON169963:0:Tno-0-0516
LMON265669:0:Tyes-0-0495
LPLA220668:0:Tyes-0-0-
LPNE272624:0:Tno0107106107-
LPNE297245:1:Fno8701174117511740
LPNE297246:1:Fyes8479559549550
LPNE400673:0:Tno01061051062177
LREU557436:0:Tyes-0-0-
LSAK314315:0:Tyes-0-0-
LSPH444177:1:Tyes019501948195054
LWEL386043:0:Tyes-0-0500
LXYL281090:0:Tyes-10--
MABS561007:1:Tyes138501--
MAER449447:0:Tyes1099631-6310
MAQU351348:2:Tyes0121623
MAVI243243:0:Tyes15860-011
MBOV233413:0:Tno3809890
MBOV410289:0:Tno3799890
MCAP243233:0:Tyes21011113
MEXT419610:0:Tyes0121-
MFLA265072:0:Tyes5235225215220
MGIL350054:3:Tyes127001-11
MLEP272631:0:Tyes219010107
MLOT266835:2:Tyes0121-
MMAG342108:0:Tyes34540
MMAR394221:0:Tyes2-430
MPEN272633:0:Tyes476-0--
MPET420662:1:Tyes3093009301030090
MSME246196:0:Tyes01753175217531743
MSP164756:1:Tno01313131213131304
MSP164757:0:Tno01331133013311322
MSP189918:2:Tyes01328132713281319
MSP266779:3:Tyes012128
MSP400668:0:Tyes01211073
MSP409:2:Tyes2101-
MSUC221988:0:Tyes8508428408420
MSYN262723:0:Tyes--0--
MTBCDC:0:Tno4099890
MTBRV:0:Tno3839890
MTHE264732:0:Tyes50302-538
MTUB336982:0:Tno3599890
MTUB419947:0:Tyes3929890
MVAN350058:0:Tyes01387138613871375
MXAN246197:0:Tyes781003100110030
NARO279238:0:Tyes21014
NEUR228410:0:Tyes174417431742-0
NEUT335283:2:Tyes210-152
NFAR247156:2:Tyes242301025
NGON242231:0:Tyes035497-1592
NHAM323097:2:Tyes12320
NMEN122586:0:Tno15976213196210
NMEN122587:0:Tyes5109416259410
NMEN272831:0:Tno1425422535420
NMEN374833:0:Tno04401194401563
NMUL323848:3:Tyes219622002201-0
NOCE323261:1:Tyes0121941
NSEN222891:0:Tyes559-0--
NSP103690:6:Tyes10461693016931426
NSP35761:1:Tyes194401-22
NSP387092:0:Tyes--0-291
NWIN323098:0:Tyes12320
OANT439375:5:Tyes2101496
OCAR504832:0:Tyes21013
OIHE221109:0:Tyes0333331333221
OTSU357244:0:Fyes0-90--
PACN267747:0:Tyes-01--
PAER208963:0:Tyes21014142
PAER208964:0:Tno0121805
PARC259536:0:Tyes15103633623630
PATL342610:0:Tyes545556550
PCAR338963:0:Tyes0171917751
PCRY335284:1:Tyes17492992982990
PDIS435591:0:Tyes427--0-
PENT384676:0:Tyes-3805380638050
PFLU205922:0:Tyes42454246424742460
PFLU216595:1:Tyes1281291301290
PFLU220664:0:Tyes45294530453145300
PGIN242619:0:Tyes32--0-
PHAL326442:1:Tyes2101624
PING357804:0:Tyes2101332
PINT246198:1:Tyes---0-
PLUM243265:0:Fyes21076022
PLUT319225:0:Tyes-0---
PMAR146891:0:Tyes---0-
PMAR167539:0:Tyes---0-
PMAR167540:0:Tyes-0---
PMAR167542:0:Tyes-0-0-
PMAR167546:0:Tyes-0-0-
PMAR167555:0:Tyes---0-
PMAR59920:0:Tno---0-
PMAR74546:0:Tyes-0-0-
PMAR74547:0:Tyes-0-0-
PMAR93060:0:Tyes-133201332-
PMEN399739:0:Tyes1521531541530
PMOB403833:0:Tyes--0--
PMUL272843:1:Tyes6496946936940
PNAP365044:8:Tyes288410-3307
PPEN278197:0:Tyes-0-0-
PPRO298386:2:Tyes18351836183718360
PPUT160488:0:Tno-5758570
PPUT351746:0:Tyes-6768670
PPUT76869:0:Tno-1081091080
PRUM264731:0:Tyes---0-
PSP117:0:Tyes26990-02205
PSP296591:2:Tyes029512952-3466
PSP312153:0:Tyes1650-1651-0
PSP56811:2:Tyes096979610
PSTU379731:0:Tyes4314324334320
PSYR205918:0:Tyes1481491501490
PSYR223283:2:Tyes2892902912900
PTHE370438:0:Tyes4650201008
RAKA293614:0:Fyes87-0--
RALB246199:0:Tyes--0--
RBEL336407:0:Tyes0-1230--
RBEL391896:0:Fno1337-0--
RCAN293613:0:Fyes71-0--
RCAS383372:0:Tyes--0--
RCON272944:0:Tno105-0--
RDEN375451:4:Tyes736735734-0
RETL347834:5:Tyes21014
REUT264198:3:Tyes210-2345
REUT381666:2:Tyes21012542
RFEL315456:2:Tyes93-0--
RFER338969:1:Tyes262810-16
RLEG216596:6:Tyes21014
RMAS416276:1:Tyes75-0--
RMET266264:2:Tyes210-2512
RPAL258594:0:Tyes2-014
RPAL316055:0:Tyes21014
RPAL316056:0:Tyes23430
RPAL316057:0:Tyes21014
RPAL316058:0:Tyes23430
RPOM246200:0:Tyes046--
RPOM246200:1:Tyes----0
RPRO272947:0:Tyes66-0--
RRIC392021:0:Fno104-0--
RRIC452659:0:Tyes104-0--
RRUB269796:1:Tyes34540
RSAL288705:0:Tyes--0--
RSOL267608:1:Tyes21012263
RSP101510:3:Fyes55362019-0
RSP357808:0:Tyes--0--
RSPH272943:3:Tyes2101-
RSPH272943:4:Tyes----0
RSPH349101:1:Tno2101-
RSPH349101:2:Tno----0
RSPH349102:4:Tyes0121-
RSPH349102:5:Tyes----0
RTYP257363:0:Tno69-0--
RXYL266117:0:Tyes-286-2860
SACI56780:0:Tyes0129127--
SAGA205921:0:Tno-0-0-
SAGA208435:0:Tno-0-0-
SAGA211110:0:Tyes-0-0-
SALA317655:1:Tyes1010003
SARE391037:0:Tyes023442343-1276
SAUR158878:1:Tno0279278279206
SAUR158879:1:Tno0276275276204
SAUR196620:0:Tno0348347348277
SAUR273036:0:Tno0282281282199
SAUR282458:0:Tno0369368369298
SAUR282459:0:Tno0-279280210
SAUR359786:1:Tno0274273274201
SAUR359787:1:Tno0282281282206
SAUR367830:3:Tno0-343344262
SAUR418127:0:Tyes0276275276204
SAUR426430:0:Tno0-272273205
SAUR93061:0:Fno0382381382305
SAUR93062:1:Tno0308307308223
SAVE227882:1:Fyes0316831693168-
SBAL399599:3:Tyes8658668678660
SBAL402882:1:Tno8478488498480
SBOY300268:1:Tyes210143021
SCO:2:Fyes32980---
SDEG203122:0:Tyes5625635645630
SDEN318161:0:Tyes210-806
SDYS300267:1:Tyes210128
SELO269084:0:Tyes12111806573-0
SENT209261:0:Tno3903913920369
SENT220341:0:Tno21039323
SENT295319:0:Tno3323333340311
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