CANDIDATE ID: 663

CANDIDATE ID: 663

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9922430e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    6.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7420 (ygbM) (b2739)
   Products of gene:
     - G7420-MONOMER (conserved protein)

- G7419 (ygbL) (b2738)
   Products of gene:
     - G7419-MONOMER (predicted class II aldolase)

- G7418 (ygbK) (b2737)
   Products of gene:
     - G7418-MONOMER (conserved protein)

- G7417 (ygbJ) (b2736)
   Products of gene:
     - G7417-MONOMER (predicted dehydrogenase, with NAD(P)-binding Rossmann-fold domain)

- EG10348 (fucA) (b2800)
   Products of gene:
     - FUCPALDOL-MONOMER (FucA)
     - CPLX0-7633 (L-fuculose-phosphate aldolase)
       Reactions:
        L-fuculose-1-phosphate  =  L-lactaldehyde + dihydroxyacetone phosphate
         In pathways
         FUC-RHAMCAT-PWY (superpathway of fucose and rhamnose degradation)
         FUCCAT-PWY (fucose degradation)
         PWY-5197 (PWY-5197)
        D-ribulose-1-phosphate  =  glycolaldehyde + dihydroxyacetone phosphate
         In pathways
         PWY-5257 (PWY-5257)
         DARABCATK12-PWY (D-arabinose degradation I)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 116
Effective number of orgs (counting one per cluster within 468 clusters): 76

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSON300269 ncbi Shigella sonnei Ss0465
SPRO399741 ncbi Serratia proteamaculans 5685
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2275
SAVE227882 ncbi Streptomyces avermitilis MA-46804
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RSP101510 ncbi Rhodococcus jostii RHA14
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PSP117 Pirellula sp.4
PPUT351746 ncbi Pseudomonas putida F14
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL15
MSME246196 ncbi Mycobacterium smegmatis MC2 1554
KRAD266940 ncbi Kineococcus radiotolerans SRS302165
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HINF71421 ncbi Haemophilus influenzae Rd KW205
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DARO159087 ncbi Dechloromonas aromatica RCB4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
BXEN266265 ncbi Burkholderia xenovorans LB4005
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.5
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BCLA66692 ncbi Bacillus clausii KSM-K164
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62928 ncbi Azoarcus sp. BH724
ASP1667 Arthrobacter sp.4
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AHYD196024 Aeromonas hydrophila dhakensis5
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
AAUR290340 ncbi Arthrobacter aurescens TC15


Names of the homologs of the genes in the group in each of these orgs
  G7420   G7419   G7418   G7417   EG10348   
YPSE349747 YPSIP31758_2745YPSIP31758_2747YPSIP31758_2748YPSIP31758_2747
YPES386656 YPDSF_2457YPDSF_2459YPDSF_2460YPDSF_2459
YPES377628 YPN_2740YPN_2742YPN_2743YPN_2742
YPES360102 YPA_0952YPA_0950YPA_0949YPA_0950
YPES214092 YPO1238YPO1236YPO1235YPO1236
YPES187410 Y2949Y2951Y2952Y2951
YENT393305 YE2501YE2502YE2503YE2502
XAUT78245 XAUT_2368XAUT_1030XAUT_1025XAUT_1027XAUT_1030
VEIS391735 VEIS_2462VEIS_2019VEIS_2460VEIS_3388VEIS_2019
STYP99287 STM2915STM2916STM2917STM2918STM2974
STHE292459 STH188STH2299STH938STH188
SSON300269 SSO_2887SSO_2886SSO_2885SSO_2884SSO_2957
SPRO399741 SPRO_1489SPRO_1490SPRO_1491SPRO_1492SPRO_1490
SMEL266834 SMB20680SMB20666SMB20670SMB20668SMC01621
SMED366394 SMED_5560SMED_4323SMED_4319SMED_4321SMED_2157
SHIGELLA GIPFUCAYHAEFUCA
SERY405948 SACE_6731SACE_5215SACE_3459SACE_6730SACE_5215
SENT454169 SEHA_C3104SEHA_C3105SEHA_C3106SEHA_C3107SEHA_C3182
SENT321314 SCH_2845SCH_2846SCH_2847SCH_2848SCH_2913
SENT295319 SPA2772SPA2773SPA2774SPA2775SPA2838
SENT220341 STY3040STY3041STY0184STY3430STY3113
SENT209261 T2816T2817T0167T3168T2882
SCO SCO6206SCO1844SCO6205SCO1844
SBOY300268 SBO_2781SBO_2782SBO_2783SBO_2784SBO_2681
SAVE227882 SAV2024SAV6421SAV2025SAV6421
RXYL266117 RXYL_2851RXYL_1678RXYL_2989RXYL_2852RXYL_1678
RSP101510 RHA1_RO03225RHA1_RO08975RHA1_RO01539RHA1_RO08975
RRUB269796 RRU_A2503RRU_A3143RRU_A3142RRU_A1833RRU_A0359
RPOM246200 SPO_2563SPO_2562SPO_2561SPO_2560SPO_2562
RPAL316057 RPD_1855RPD_1853RPD_1856RPD_1854RPD_1853
RMET266264 RMET_1839RMET_1837RMET_1836RMET_1835RMET_4108
RLEG216596 RL3799PRL120619PRL110151PRL120616PRL110150
RFER338969 RFER_0443RFER_0444RFER_0445RFER_0446RFER_3750
REUT381666 H16_A1558H16_A1560H16_A1561H16_A1562H16_B2000
REUT264198 REUT_A1423REUT_A1425REUT_A1426REUT_A1427REUT_A1425
RETL347834 RHE_PF00346RHE_PF00343RHE_PF00347RHE_PF00345RHE_PF00343
RDEN375451 RD1_3783RD1_3784RD1_3785RD1_3786RD1_3632
PSYR223283 PSPTO_5064PSPTO_5062PSPTO_5061PSPTO_5060PSPTO_5062
PSYR205918 PSYR_0462PSYR_0464PSYR_0465PSYR_0466PSYR_0464
PSP312153 PNUC_1567PNUC_1632PNUC_1633PNUC_1634PNUC_1632
PSP296591 BPRO_4876BPRO_4877BPRO_4878BPRO_4883BPRO_0283
PSP117 RB8188RB2568RB13140RB681
PPUT351746 PPUT_1571PPUT_1847PPUT_4530PPUT_3705
PMUL272843 PM1363PM1364PM1365PM1366PM1364
PLUM243265 PLU2510PLU2509PLU2508PLU2507PLU2509
PFLU220664 PFL_3342PFL_3344PFL_3345PFL_3346PFL_3344
PFLU216595 PFLU2356PFLU2354PFLU2353PFLU2352PFLU1409
OIHE221109 OB3254OB1012OB0815OB3254
MSUC221988 MS1978MS1979MS1980MS1981MS1979
MSP409 M446_2625M446_2628M446_2624M446_2626M446_2684
MSP400668 MMWYL1_2552MMWYL1_2551MMWYL1_2550MMWYL1_2549MMWYL1_4174
MSME246196 MSMEG_5478MSMEG_1714MSMEG_5477MSMEG_1714
KRAD266940 KRAD_2140KRAD_2485KRAD_2486KRAD_2146KRAD_2485
KPNE272620 GKPORF_B0661GKPORF_B0662GKPORF_B0663GKPORF_B0664GKPORF_B2488
HSOM228400 HSM_1906HSM_1905HSM_1904HSM_1903HSM_0580
HSOM205914 HS_0015HS_0014HS_0013HS_0012HS_1451
HINF71421 HI_1013HI_1012HI_1011HI_1010HI_0611
GTHE420246 GTNG_1379GTNG_1797GTNG_3231GTNG_0889
ECOO157 GIPFUCAYHAEFUCA
ECOL83334 ECS0569ECS3660ECS4003ECS3660
ECOL585397 ECED1_3192ECED1_3191ECED1_3190ECED1_3189ECED1_3253
ECOL585056 ECUMN_0549ECUMN_3129ECUMN_3607ECUMN_3129
ECOL585055 EC55989_3006EC55989_3005EC55989_3004EC55989_3003EC55989_3079
ECOL585035 ECS88_3006ECS88_3005ECS88_3004ECS88_3003ECS88_3069
ECOL585034 ECIAI1_2834ECIAI1_2833ECIAI1_2832ECIAI1_2831ECIAI1_2910
ECOL481805 ECOLC_0973ECOLC_0974ECOLC_0975ECOLC_0976ECOLC_0912
ECOL469008 ECBD_0985ECBD_0986ECBD_0987ECBD_0988ECBD_0986
ECOL439855 ECSMS35_4865ECSMS35_2940ECSMS35_3420ECSMS35_2940
ECOL413997 ECB_02589ECB_02588ECB_02587ECB_02586ECB_02588
ECOL409438 ECSE_2987ECSE_2986ECSE_2985ECSE_2984ECSE_3060
ECOL405955 APECO1_3785APECO1_3786APECO1_3787APECO1_3788APECO1_3731
ECOL364106 UTI89_C3105UTI89_C3104UTI89_C3103UTI89_C3102UTI89_C3171
ECOL362663 ECP_2717ECP_2716ECP_2715ECP_2714ECP_2783
ECOL331111 ECE24377A_3036ECE24377A_3035ECE24377A_3034ECE24377A_3033ECE24377A_3105
ECOL316407 ECK2734:JW2709:B2739ECK2733:JW2708:B2738ECK2732:JW2707:B2737ECK2731:JW2706:B2736ECK2795:JW2771:B2800
ECOL199310 C3300C3299C3298C3297C3368
ECAR218491 ECA4330ECA4329ECA4328ECA4327ECA4329
DSHI398580 DSHI_1554DSHI_1553DSHI_1552DSHI_4221DSHI_0523
DHAF138119 DSY4167DSY2602DSY4169DSY2602
DARO159087 DARO_3317DARO_3336DARO_3340DARO_3336
CSP501479 CSE45_2179CSE45_5144CSE45_5143CSE45_5144
CSAL290398 CSAL_3181CSAL_3180CSAL_3179CSAL_3178CSAL_3180
BXEN266265 BXE_B2169BXE_B2170BXE_B2171BXE_B2172BXE_B2170
BTHA271848 BTH_II0973BTH_II0975BTH_II0976BTH_II0977BTH_I0804
BSUI470137 BSUIS_B0151BSUIS_B0148BSUIS_B0152BSUIS_A1365BSUIS_B1105
BSUI204722 BR_A0147BR_A0144BR_A0148BR_1314BR_A1110
BSP376 BRADO4945BRADO2550BRADO2553BRADO2551BRADO4793
BSP36773 BCEP18194_B0474BCEP18194_B0476BCEP18194_B0477BCEP18194_B0478BCEP18194_B0077
BPSE320373 BURPS668_A2017BURPS668_A2015BURPS668_A2014BURPS668_A2013BURPS668_1000
BPSE320372 BURPS1710B_B0537BURPS1710B_B0535BURPS1710B_B0534BURPS1710B_B0533BURPS1710B_A1214
BPSE272560 BPSS1419BPSS1417BPSS1416BPSS1415BPSL0937
BPET94624 BPET3351BPET1986BPET2509BPET2603
BPAR257311 BPP1378BPP1893BPP1554BPP1650
BOVI236 GBOORFA0144GBOORFA0141GBOORFA0145GBOORFA0146GBOORFA0141
BMEL359391 BAB2_0144BAB2_0141BAB2_0145BAB1_1334BAB2_1068
BMEL224914 BMEII1092BMEII1095BMEII1091BMEII1090BMEII0189
BMAL320389 BMA10247_A1861BMA10247_A1859BMA10247_A1858BMA10247_A1857BMA10247_0280
BMAL243160 BMA_A0573BMA_A0575BMA_A0576BMA_A0577BMA_1957
BLIC279010 BL00350BL03433BL00292BL01183
BJAP224911 BLR3167BLL2927BLR2930BLR2928BLL6170
BCLA66692 ABC4076ABC0307ABC2403ABC4076
BCEN331272 BCEN2424_5159BCEN2424_5157BCEN2424_5156BCEN2424_5155BCEN2424_5157
BCEN331271 BCEN_3208BCEN_3210BCEN_3211BCEN_3212BCEN_3210
BCAN483179 BCAN_B0148BCAN_B0145BCAN_B0149BCAN_A1339BCAN_B1132
BBRO257310 BB2444BB3215BB1031BB3078
BAMB398577 BAMMC406_5077BAMMC406_5075BAMMC406_5074BAMMC406_5073BAMMC406_5443
BAMB339670 BAMB_4554BAMB_4552BAMB_4551BAMB_4550BAMB_4552
BABO262698 BRUAB2_0143BRUAB2_0140BRUAB2_0144BRUAB1_1315BRUAB2_1049
ASP76114 EBA4617EBA3888EBA3884EBA3888
ASP62928 AZO1163AZO3361AZO3363AZO3361
ASP1667 ARTH_3689ARTH_0223ARTH_0273ARTH_0223
AMET293826 AMET_3758AMET_0226AMET_2959AMET_3758
AHYD196024 AHA_1058AHA_1059AHA_1060AHA_1061AHA_1059
ACRY349163 ACRY_2430ACRY_2434ACRY_2429ACRY_2431ACRY_2573
ACAU438753 AZC_3489AZC_2779AZC_2775AZC_2777AZC_2779
AAUR290340 AAUR_3506AAUR_3710AAUR_1904AAUR_0255AAUR_3710


Organism features enriched in list (features available for 106 out of the 116 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.007511929112
Disease:Brucellosis 0.000183755
Disease:Bubonic_plague 0.000909656
Disease:Melioidosis 0.005871733
Endospores:No 0.000079822211
GC_Content_Range4:0-40 5.297e-175213
GC_Content_Range4:40-60 0.000338556224
GC_Content_Range4:60-100 4.982e-645145
GC_Content_Range7:30-40 1.707e-115166
GC_Content_Range7:50-60 7.364e-840107
GC_Content_Range7:60-70 0.000063040134
Genome_Size_Range5:0-2 5.266e-151155
Genome_Size_Range5:2-4 4.643e-617197
Genome_Size_Range5:4-6 1.330e-1062184
Genome_Size_Range5:6-10 1.582e-92647
Genome_Size_Range9:1-2 6.608e-121128
Genome_Size_Range9:2-3 5.326e-75120
Genome_Size_Range9:4-5 4.602e-63496
Genome_Size_Range9:5-6 0.00033462888
Genome_Size_Range9:6-8 5.167e-72038
Genome_Size_Range9:8-10 0.001521769
Gram_Stain:Gram_Neg 1.789e-987333
Gram_Stain:Gram_Pos 0.000119713150
Habitat:Aquatic 4.823e-6391
Motility:No 0.000102913151
Motility:Yes 0.000074866267
Optimal_temp.:30 0.0078379715
Oxygen_Req:Anaerobic 5.444e-82102
Oxygen_Req:Facultative 0.000021055201
Pathogenic_in:Animal 0.00940341966
Shape:Coccus 0.0018638682
Shape:Rod 9.964e-1191347
Shape:Spiral 0.0070676134
Temp._range:Mesophilic 0.000073099473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 328
Effective number of orgs (counting one per cluster within 468 clusters): 254

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A1
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110181
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103311
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae1
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-101
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80041
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339131
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VFIS312309 ncbi Vibrio fischeri ES1141
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252591
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81021
SSP644076 Silicibacter sp. TrichCH4B1
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P21
SSED425104 ncbi Shewanella sediminis HAW-EB31
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE170187 ncbi Streptococcus pneumoniae G540
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SLAC55218 Ruegeria lacuscaerulensis1
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2171
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1851
SBAL399599 ncbi Shewanella baltica OS1951
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 71
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RAKA293614 ncbi Rickettsia akari Hartford0
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP56811 Psychrobacter sp.0
PRUM264731 ncbi Prevotella ruminicola 231
PPRO298386 ncbi Photobacterium profundum SS91
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PINT246198 Prevotella intermedia 170
PGIN242619 ncbi Porphyromonas gingivalis W830
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PAST100379 Onion yellows phytoplasma0
PARC259536 ncbi Psychrobacter arcticus 273-41
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197071
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C911
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSP164757 ncbi Mycobacterium sp. JLS1
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAG342108 ncbi Magnetospirillum magneticum AMB-11
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille1
ILOI283942 ncbi Idiomarina loihiensis L2TR1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL11
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HARS204773 ncbi Herminiimonas arsenicoxydans1
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08031
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU181
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FMAG334413 ncbi Finegoldia magna ATCC 293280
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25941
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124721
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CAULO ncbi Caulobacter crescentus CB150
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BSUB ncbi Bacillus subtilis subtilis 1680
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BMAL320388 ncbi Burkholderia mallei SAVP11
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP11
APHA212042 ncbi Anaplasma phagocytophilum HZ0
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40180
AAVE397945 ncbi Acidovorax citrulli AAC00-11


Names of the homologs of the genes in the group in each of these orgs
  G7420   G7419   G7418   G7417   EG10348   
ZMOB264203
XORY360094 XOOORF_3158
XORY342109 XOO1742
XORY291331 XOO1846
XFAS405440
XFAS183190
XFAS160492
XCAM487884 XCC-B100_3039
XCAM316273 XCAORF_1517
XCAM314565 XC_2977
XCAM190485 XCC1264
WSUC273121
WPIP955
WPIP80849
VFIS312309 VFA0173
UURE95667
UURE95664
UPAR505682
UMET351160
TTUR377629
TTHE300852
TTHE262724
TPAL243276
TERY203124
TELO197221
TDEN326298
TDEN292415 TBD_0081
TCRU317025
TACI273075
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP94122 SHEWANA3_2766
SSP84588 SYNW2331OR0970
SSP644076 SCH4B_2988
SSP387093
SSP321332
SSP321327
SSP1148 SLR0229
SSP1131 SYNCC9605_2461
SSOL273057 SSO1560
SSED425104 SSED_2619
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE170187
SPEA398579 SPEA_2778
SONE211586 SO_1682
SMUT210007
SMAR399550
SLOI323850 SHEW_1672
SLAC55218 SL1157_1216
SHAL458817 SHAL_2873
SHAE279808
SGOR29390
SEPI176280
SEPI176279
SELO269084
SDEN318161 SDEN_1938
SDEG203122
SBAL402882 SHEW185_1494
SBAL399599 SBAL195_1530
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655 SALA_1843
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RTYP257363
RSP357808 ROSERS_3990
RSAL288705
RRIC452659
RRIC392021 A1G_03825
RPRO272947 RP493
RPAL316056 RPC_3091
RPAL316055 RPE_1699
RMAS416276 RMA_0681
RFEL315456
RCON272944 RC0678
RCAS383372 RCAS_3343
RCAN293613
RBEL391896 A1I_03900
RBEL336407 RBE_0952
RAKA293614
PTHE370438
PSP56811
PRUM264731 GFRORF0421
PPRO298386 PBPRA2274
PPEN278197 PEPE_0164
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PINT246198
PGIN242619
PDIS435591 BDI_1641
PCRY335284 PCRYO_1513
PAST100379
PARC259536 PSYC_0904
OTSU357244
NWIN323098 NWI_0882
NSP387092
NSP103690
NSEN222891
NPHA348780
NOCE323261 NOC_2077
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283 NEUT_0218
MTUB419947 MRA_0735
MTUB336982 TBFG_10741
MTBRV RV0727C
MTBCDC MT0752
MSYN262723
MSP164757 MJLS_5726
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR394221 MMAR10_1542
MMAR368407
MMAG342108 AMB3587
MLEP272631
MLAB410358
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_3173
MGEN243273
MFLO265311
MFLA265072
MCAP340047
MBUR259564 MBUR_2210
MBOV410289 BCG_0777C
MBOV233413 MB0748C
MBAR269797
MART243272
MAER449447 MAE_39960
MAEO419665 MAEO_0198
MACE188937
LXYL281090
LSPH444177 BSPH_1307
LSAK314315 LSA0463
LREU557436 LREU_0481
LPNE400673 LPC_0148
LPNE297246 LPP0142
LPNE297245 LPL0127
LPNE272624 LPG0128
LPLA220668
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967 LSEI_2731
LBRE387344
LBOR355277
LBOR355276
LBIF456481 LEPBI_I1551
LBIF355278 LBF_1498
LACI272621
JSP375286 MMA_0380
ILOI283942 IL0867
HWAL362976
HPYL85963
HPYL357544
HPY
HMUK485914
HHEP235279
HHAL349124 HHAL_2413
HDUC233412
HARS204773 HEAR0333
HACI382638
GVIO251221
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154 GFO_0698
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011 FTH_0918
FTUL351581
FSUC59374
FSP1855
FSP106370 FRANCCI3_0803
FRANT
FPHI484022
FMAG334413
FALN326424 FRAAL6073
ERUM302409
ERUM254945
ELIT314225 ELI_01625
EFAE226185 EF_2889
ECHA205920
ECAN269484
DRAD243230
DPSY177439
DOLE96561
DNOD246195
CVIO243365 CV_2081
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78 CAUL_0431
CRUT413404
CPSY167879 CPS_3424
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPEL335992
CMUR243161
CMET456442
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHUT269798
CHOM360107
CGLU196627 CG2716
CFET360106
CFEL264202
CEFF196164 CE2368
CDIP257309 DIP2079
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT508765 CLL_A3262
CBLO291272
CBLO203907
CBEI290402 CBEI_3277
CAULO
CACE272562
CABO218497
BTUR314724
BTRI382640
BSUB
BSP107806
BQUI283165
BMAL320388 BMASAVP1_A0957
BHER314723
BHEN283166
BHAL272558 BH0802
BGAR290434
BCIC186490
BCER315749 BCER98_1728
BBUR224326
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAMY326423 RBAM_013720
BAFZ390236
AYEL322098
AVAR240292
AURANTIMONAS
ASP62977 ACIAD3075
APHA212042
AORE350688 CLOS_2545
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159
ACEL351607 ACEL_0872
ABUT367737
AAVE397945 AAVE_2600


Organism features enriched in list (features available for 308 out of the 328 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00188091517
Arrangment:Pairs 0.000992945112
Arrangment:Singles 0.0088625139286
Disease:Pharyngitis 0.005810388
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00082121111
Disease:Wide_range_of_infections 0.00082121111
Disease:bronchitis_and_pneumonitis 0.005810388
Endospores:No 0.0066547124211
Endospores:Yes 0.00002981453
GC_Content_Range4:0-40 3.175e-16159213
GC_Content_Range4:40-60 0.0008649101224
GC_Content_Range4:60-100 6.678e-947145
GC_Content_Range7:0-30 0.00231713447
GC_Content_Range7:30-40 2.030e-12125166
GC_Content_Range7:50-60 5.190e-636107
GC_Content_Range7:60-70 1.789e-745134
Genome_Size_Range5:0-2 9.283e-15122155
Genome_Size_Range5:2-4 0.0001520124197
Genome_Size_Range5:4-6 8.954e-1456184
Genome_Size_Range5:6-10 2.698e-9647
Genome_Size_Range9:0-1 6.222e-62527
Genome_Size_Range9:1-2 1.247e-997128
Genome_Size_Range9:2-3 0.000111281120
Genome_Size_Range9:4-5 6.055e-72996
Genome_Size_Range9:5-6 3.195e-62788
Genome_Size_Range9:6-8 1.579e-7538
Habitat:Host-associated 4.077e-10144206
Habitat:Multiple 0.000013171178
Habitat:Terrestrial 0.0036116931
Motility:No 0.0000459100151
Motility:Yes 1.097e-10103267
Optimal_temp.:30-37 0.00544331518
Oxygen_Req:Anaerobic 0.001685541102
Shape:Coccus 9.898e-66182
Shape:Rod 6.452e-15138347
Shape:Sphere 0.00007471819
Shape:Spiral 8.918e-73134
Temp._range:Hyperthermophilic 0.0003503423



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTCAT-PWY (D-galactonate degradation)104660.5157
GALACTITOLCAT-PWY (galactitol degradation)73520.4924
4-HYDROXYMANDELATE-DEGRADATION-PWY (4-hydroxymandelate degradation)102610.4681
GLUCARDEG-PWY (D-glucarate degradation I)152770.4676
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149750.4568
GALACTARDEG-PWY (D-galactarate degradation I)151750.4512
GALLATE-DEGRADATION-I-PWY (gallate degradation I)83510.4313
PWY0-981 (taurine degradation IV)106590.4309
XYLCAT-PWY (xylose degradation I)217900.4292
PWY-1501 (mandelate degradation I)73460.4155
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)195830.4152
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)212860.4049
PWY-5148 (acyl-CoA hydrolysis)227890.4004
P344-PWY (acrylonitrile degradation)210850.4004
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138660.4002



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7419   G7418   G7417   EG10348   
G74200.999350.9993510.9993760.998504
G74190.9995010.9993260.999901
G74180.9994020.998932
G74170.9986
EG10348



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PAIRWISE BLAST SCORES:

  G7420   G7419   G7418   G7417   EG10348   
G74200.0f0----
G7419-0.0f0--4.7e-12
G7418--0.0f0--
G7417---0.0f0-
EG10348-7.3e-16--0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7417 G7418 G7419 G7420 (centered at G7419)
EG10348 (centered at EG10348)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7420   G7419   G7418   G7417   EG10348   
161/623252/623124/623245/623280/623
AAEO224324:0:Tyes-1382-0-
AAUR290340:2:Tyes31813384160803384
AAVE397945:0:Tyes---0-
ABAC204669:0:Tyes-4194--0
ABAU360910:0:Tyes728-01112-
ABOR393595:0:Tyes0--275-
ACAU438753:0:Tyes7204024
ACEL351607:0:Tyes----0
ACRY349163:8:Tyes1502143
ADEH290397:0:Tyes-0--0
AEHR187272:0:Tyes-213-0213
AHYD196024:0:Tyes01231
AMET293826:0:Tyes-3453026793453
ANAE240017:0:Tyes-0--0
AORE350688:0:Tyes--0--
APER272557:0:Tyes-0--0
APLE416269:0:Tyes-0--0
APLE434271:0:Tno-0--0
ASAL382245:5:Tyes-0--0
ASP1667:3:Tyes34960-500
ASP232721:2:Tyes0--180-
ASP62928:0:Tyes02229-22312229
ASP62977:0:Tyes0----
ASP76114:2:Tyes4262-02
BABO262698:0:Tno304-849
BABO262698:1:Tno---0-
BAMB339670:2:Tno42102
BAMB398577:2:Tno4210373
BAMY326423:0:Tyes---0-
BANT260799:0:Tno-0-18820
BANT261594:2:Tno-0-18440
BANT568206:2:Tyes-0-18230
BANT592021:2:Tno-0-19390
BBRO257310:0:Tyes1431-220002062
BCAN483179:0:Tno304-936
BCAN483179:1:Tno---0-
BCEN331271:1:Tno02342
BCEN331272:2:Tyes42102
BCER226900:1:Tyes-0-18750
BCER288681:0:Tno-0-18200
BCER315749:1:Tyes---0-
BCER405917:1:Tyes-0-18290
BCER572264:1:Tno-0-19330
BCLA66692:0:Tyes-3804021243804
BFRA272559:1:Tyes-0--0
BFRA295405:0:Tno-0--0
BHAL272558:0:Tyes--0--
BJAP224911:0:Fyes2400313264
BLIC279010:0:Tyes-9411581380
BLON206672:0:Tyes-0--0
BMAL243160:0:Tno0234-
BMAL243160:1:Tno----0
BMAL320388:1:Tno----0
BMAL320389:0:Tyes4210-
BMAL320389:1:Tyes----0
BMEL224914:0:Tno9149179139120
BMEL359391:0:Tno304-834
BMEL359391:1:Tno---0-
BOVI236:0:Tyes30450
BPAR257311:0:Tno0-487163249
BPER257313:0:Tyes--32901108
BPET94624:0:Tyes1385-0522616
BPSE272560:0:Tyes4210-
BPSE272560:1:Tyes----0
BPSE320372:0:Tno4210-
BPSE320372:1:Tno----0
BPSE320373:0:Tno4210-
BPSE320373:1:Tno----0
BPUM315750:0:Tyes--0577-
BSP36773:1:Tyes3973994004010
BSP376:0:Tyes22860312150
BSUI204722:0:Tyes304-919
BSUI204722:1:Tyes---0-
BSUI470137:0:Tno304-891
BSUI470137:1:Tno---0-
BTHA271848:0:Tno0234-
BTHA271848:1:Tno----0
BTHE226186:0:Tyes-0--0
BTHU281309:1:Tno-0-17890
BTHU412694:1:Tno-0-17000
BVIE269482:6:Tyes127--0-
BWEI315730:4:Tyes-0-18320
BXEN266265:1:Tyes32102
CBEI290402:0:Tyes----0
CBOT36826:1:Tno-0922-0
CBOT441770:0:Tyes-0838-0
CBOT441771:0:Tno-0--0
CBOT441772:1:Tno-0887-0
CBOT498213:1:Tno-0924-0
CBOT508765:1:Tyes-0---
CBOT515621:2:Tyes-01083-0
CBOT536232:0:Tno-0954-0
CDES477974:0:Tyes-0--0
CDIF272563:1:Tyes-2282-28210
CDIP257309:0:Tyes---0-
CEFF196164:0:Fyes0----
CGLU196627:0:Tyes0----
CHYD246194:0:Tyes-2950-295
CKOR374847:0:Tyes-0--0
CMAQ397948:0:Tyes-497-01493
CMIC31964:2:Tyes-0--0
CMIC443906:2:Tyes-0--0
CNOV386415:0:Tyes-0368-0
CPER195102:1:Tyes-0--0
CPER195103:0:Tno-0--0
CPHY357809:0:Tyes-0--845
CPSY167879:0:Tyes---0-
CSAL290398:0:Tyes32102
CSP501479:3:Fyes-10-1
CSP501479:8:Fyes0----
CSP78:2:Tyes0----
CTET212717:0:Tyes-0--0
CVIO243365:0:Tyes---0-
DARO159087:0:Tyes019-2319
DDES207559:0:Tyes-34950-3495
DETH243164:0:Tyes-0--0
DGEO319795:0:Tyes1--0-
DHAF138119:0:Tyes15730-15750
DRED349161:0:Tyes-0--0
DSHI398580:0:Tyes---0-
DSHI398580:5:Tyes104510441043-0
DSP216389:0:Tyes-0--0
DSP255470:0:Tno-0--0
DVUL882:1:Tyes-0--0
ECAR218491:0:Tyes32102
ECOL199310:0:Tno321069
ECOL316407:0:Tno321064
ECOL331111:6:Tno321070
ECOL362663:0:Tno321067
ECOL364106:1:Tno321069
ECOL405955:2:Tyes321061
ECOL409438:6:Tyes321076
ECOL413997:0:Tno32102
ECOL439855:4:Tno18370-4540
ECOL469008:0:Tno01231
ECOL481805:0:Tno626364650
ECOL585034:0:Tno321072
ECOL585035:0:Tno321062
ECOL585055:0:Tno321070
ECOL585056:2:Tno02593-30632593
ECOL585057:0:Tno-0-3990
ECOL585397:0:Tno321063
ECOL83334:0:Tno03165-35163165
ECOLI:0:Tno321065
ECOO157:0:Tno03180-35293180
EFAE226185:3:Tyes---0-
EFER585054:1:Tyes---1140
ELIT314225:0:Tyes---0-
ESP42895:1:Tyes---29850
FALN326424:0:Tyes---0-
FJOH376686:0:Tyes2944---0
FNOD381764:0:Tyes-0--0
FNUC190304:0:Tyes-0--0
FSP106370:0:Tyes---0-
FTUL393011:0:Tno----0
GBET391165:0:Tyes01184--1184
GFOR411154:0:Tyes----0
GKAU235909:1:Tyes502--0-
GTHE420246:1:Tyes48289023070-
HARS204773:0:Tyes0----
HAUR316274:2:Tyes-2881-01760
HBUT415426:0:Tyes-0--0
HCHE349521:0:Tyes0--59-
HHAL349124:0:Tyes---0-
HINF281310:0:Tyes-0--0
HINF374930:0:Tyes-0--0
HINF71421:0:Tno4003993983970
HMAR272569:7:Tyes-0--0
HMOD498761:0:Tyes-0--0
HNEP81032:0:Tyes-587-0587
HSAL478009:4:Tyes-0--0
HSOM205914:1:Tyes32101446
HSOM228400:0:Tno13341333133213310
HSP64091:2:Tno-0--0
IHOS453591:0:Tyes-0--0
ILOI283942:0:Tyes---0-
JSP290400:1:Tyes-01702-0
JSP375286:0:Tyes0----
KPNE272620:2:Tyes01231800
KRAD266940:2:Fyes64213421204213
LBIF355278:2:Tyes----0
LBIF456481:2:Tno----0
LCAS321967:1:Tyes----0
LCHO395495:0:Tyes0--5022088
LINN272626:1:Tno-1220-0-
LMES203120:1:Tyes---760
LMON169963:0:Tno-1118-0-
LMON265669:0:Tyes-1093-0-
LPNE272624:0:Tno---0-
LPNE297245:1:Fno---0-
LPNE297246:1:Fyes---0-
LPNE400673:0:Tno---0-
LREU557436:0:Tyes----0
LSAK314315:0:Tyes---0-
LSPH444177:1:Tyes---0-
LWEL386043:0:Tyes-1126-0-
MABS561007:1:Tyes---1390
MAEO419665:0:Tyes-0---
MAER449447:0:Tyes---0-
MAQU351348:2:Tyes1602--0-
MAVI243243:0:Tyes---020
MBOV233413:0:Tno----0
MBOV410289:0:Tno----0
MBUR259564:0:Tyes-0---
MCAP243233:0:Tyes-0-1180-
MEXT419610:0:Tyes0576--576
MGIL350054:3:Tyes0--2416-
MHUN323259:0:Tyes-0---
MJAN243232:2:Tyes-0--0
MKAN190192:0:Tyes-0--0
MLOT266835:2:Tyes0-53581-
MMAG342108:0:Tyes---0-
MMAR267377:0:Tyes-0--0
MMAR394221:0:Tyes---0-
MMAR402880:1:Tyes-0--0
MMAR426368:0:Tyes-0--0
MMAR444158:0:Tyes-0--0
MPET420662:1:Tyes0--230-
MSED399549:0:Tyes-0--0
MSME246196:0:Tyes37290-37280
MSP164756:0:Fno----0
MSP164756:1:Tno---0-
MSP164757:0:Tno---0-
MSP189918:0:Tyes----0
MSP189918:2:Tyes---0-
MSP266779:1:Tyes0----
MSP266779:3:Tyes---0-
MSP400668:0:Tyes32101657
MSP409:2:Tyes140260
MSTA339860:0:Tyes-0--0
MSUC221988:0:Tyes01231
MTBCDC:0:Tno----0
MTBRV:0:Tno----0
MTHE187420:0:Tyes-0--0
MTHE264732:0:Tyes-022-0
MTHE349307:0:Tyes-0--0
MTUB336982:0:Tno----0
MTUB419947:0:Tyes----0
MVAN350058:0:Tyes3517--9010
MXAN246197:0:Tyes-0--0
NARO279238:0:Tyes---02463
NEUR228410:0:Tyes---6450
NEUT335283:2:Tyes----0
NFAR247156:2:Tyes-0-3247-
NOCE323261:1:Tyes---0-
NSP35761:1:Tyes-18-17690
NWIN323098:0:Tyes----0
OANT439375:4:Tyes--0692-
OANT439375:5:Tyes0----
OCAR504832:0:Tyes79--0-
OIHE221109:0:Tyes-246821402468
PABY272844:0:Tyes-0--0
PACN267747:0:Tyes-1431--0
PAER178306:0:Tyes-733-0733
PAER208963:0:Tyes348--42090
PAER208964:0:Tno327--5270
PARC259536:0:Tyes---0-
PARS340102:0:Tyes-560-0560
PATL342610:0:Tyes1753--0-
PCAR338963:0:Tyes-0--0
PCRY335284:1:Tyes---0-
PDIS435591:0:Tyes0----
PENT384676:0:Tyes910--01589
PFLU205922:0:Tyes908--0617
PFLU216595:1:Tyes9049029019000
PFLU220664:0:Tyes02342
PFUR186497:0:Tyes-0--0
PHAL326442:1:Tyes---0707
PHOR70601:0:Tyes-0--0
PING357804:0:Tyes295--0-
PISL384616:0:Tyes-0-3140
PLUM243265:0:Fyes32102
PMEN399739:0:Tyes1420--0-
PMOB403833:0:Tyes-0--0
PMUL272843:1:Tyes01231
PNAP365044:8:Tyes3844--0-
PPEN278197:0:Tyes----0
PPRO298386:2:Tyes0----
PPUT160488:0:Tno2250--26150
PPUT351746:0:Tyes0-27529652121
PPUT76869:0:Tno2298--31100
PRUM264731:0:Tyes-0---
PSP117:0:Tyes42371022-69370
PSP296591:2:Tyes45564557455845630
PSP312153:0:Tyes065666765
PSTU379731:0:Tyes0--1-
PSYR205918:0:Tyes02342
PSYR223283:2:Tyes42102
PTOR263820:0:Tyes-0--0
RALB246199:0:Tyes-0--0
RBEL336407:0:Tyes-0---
RBEL391896:0:Fno-0---
RCAS383372:0:Tyes---0-
RCON272944:0:Tno-0---
RDEN375451:4:Tyes1421431441450
RETL347834:4:Tyes30420
REUT264198:3:Tyes02342
REUT381666:1:Tyes----0
REUT381666:2:Tyes0234-
RFER338969:1:Tyes01233307
RLEG216596:4:Tyes--1-0
RLEG216596:5:Tyes-3-0-
RLEG216596:6:Tyes0----
RMAS416276:1:Tyes-0---
RMET266264:1:Tyes----0
RMET266264:2:Tyes4210-
RPAL258594:0:Tyes02926--2926
RPAL316055:0:Tyes0----
RPAL316056:0:Tyes---0-
RPAL316057:0:Tyes20310
RPAL316058:0:Tyes1498--0-
RPOM246200:1:Tyes32102
RPRO272947:0:Tyes-0---
RRIC392021:0:Fno-0---
RRUB269796:1:Tyes21392774277314690
RSOL267608:0:Tyes---0-
RSOL267608:1:Tyes0---1785
RSP101510:2:Fyes-0--0
RSP101510:3:Fyes1682--0-
RSP357808:0:Tyes---0-
RSPH272943:4:Tyes-0--1142
RSPH349101:2:Tno-0--1110
RSPH349102:5:Tyes---0897
RXYL266117:0:Tyes11500128811510
SALA317655:1:Tyes---0-
SAVE227882:1:Fyes04465-14465
SBAL399599:3:Tyes---0-
SBAL402882:1:Tno---0-
SBOY300268:1:Tyes939495960
SCO:2:Fyes44040-44030
SDEN318161:0:Tyes---0-
SDYS300267:1:Tyes-0-2810
SENT209261:0:Tno25192520028582583
SENT220341:0:Tno25782579029132642
SENT295319:0:Tno012361
SENT321314:2:Tno012368
SENT454169:2:Tno012377
SERY405948:0:Tyes31801725031791725
SFLE198214:0:Tyes-0-3380
SFLE373384:0:Tno-108-0108
SFUM335543:0:Tyes-0-4730
SGLO343509:3:Tyes-0--0
SHAL458817:0:Tyes---0-
SHIGELLA:0:Tno02215-25412215
SLAC55218:1:Fyes0----
SLOI323850:0:Tyes---0-
SMED366394:1:Tyes0----
SMED366394:2:Tyes-402-
SMED366394:3:Tyes----0
SMEL266834:1:Tyes14042-
SMEL266834:2:Tyes----0
SONE211586:1:Tyes---0-
SPEA398579:0:Tno---0-
SPNE1313:0:Tyes-0--0
SPNE171101:0:Tno-0--0
SPNE487213:0:Tno-0--0
SPNE487214:0:Tno-0--0
SPNE488221:0:Tno-0--0
SPRO399741:1:Tyes01231
SSED425104:0:Tyes---0-
SSOL273057:0:Tyes---0-
SSON300269:1:Tyes321070
SSP1131:0:Tyes---0-
SSP1148:0:Tyes---0-
SSP292414:2:Tyes1433--0-
SSP644076:6:Fyes0----
SSP64471:0:Tyes-0-2310
SSP84588:0:Tyes---0-
SSP94122:1:Tyes---0-
STHE292459:0:Tyes-021847980
STRO369723:0:Tyes0---252
STYP99287:1:Tyes012359
SWOL335541:0:Tyes-0--0
TDEN243275:0:Tyes-0-1430
TDEN292415:0:Tyes---0-
TFUS269800:0:Tyes--10830-
TKOD69014:0:Tyes-0--0
TLET416591:0:Tyes-0--0
TMAR243274:0:Tyes-0--0
TPEN368408:1:Tyes0641--641
TPET390874:0:Tno-0--0
TPSE340099:0:Tyes-0780-0
TROS309801:0:Tyes---0-
TROS309801:1:Tyes-0--0
TSP1755:0:Tyes-0--0
TSP28240:0:Tyes-0--0
TTEN273068:0:Tyes-0--0
TVOL273116:0:Tyes-0--0
TWHI203267:0:Tyes-0--0
TWHI218496:0:Tno-0--0
VCHO:1:Fyes---0234
VCHO345073:0:Tno---0857
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