Org ID | Org Name | # genes in group found in org |
ZMOB264203 ncbi | Zymomonas mobilis mobilis ZM4 | 4 |
YPSE349747 ncbi | Yersinia pseudotuberculosis IP 31758 | 5 |
YPSE273123 ncbi | Yersinia pseudotuberculosis IP 32953 | 5 |
YPES386656 ncbi | Yersinia pestis Pestoides F | 5 |
YPES377628 ncbi | Yersinia pestis Nepal516 | 5 |
YPES360102 ncbi | Yersinia pestis Antiqua | 5 |
YPES349746 ncbi | Yersinia pestis Angola | 5 |
YPES214092 ncbi | Yersinia pestis CO92 | 5 |
YPES187410 ncbi | Yersinia pestis KIM 10 | 5 |
YENT393305 ncbi | Yersinia enterocolitica enterocolitica 8081 | 5 |
XAUT78245 ncbi | Xanthobacter autotrophicus Py2 | 4 |
VVUL216895 ncbi | Vibrio vulnificus CMCP6 | 5 |
VVUL196600 ncbi | Vibrio vulnificus YJ016 | 5 |
VPAR223926 ncbi | Vibrio parahaemolyticus RIMD 2210633 | 5 |
VFIS312309 ncbi | Vibrio fischeri ES114 | 5 |
VCHO345073 ncbi | Vibrio cholerae O395 | 5 |
VCHO ncbi | Vibrio cholerae O1 biovar El Tor str. N16961 | 5 |
TTUR377629 ncbi | Teredinibacter turnerae T7901 | 4 |
TTHE300852 ncbi | Thermus thermophilus HB8 | 4 |
TTHE262724 ncbi | Thermus thermophilus HB27 | 4 |
TTEN273068 ncbi | Thermoanaerobacter tengcongensis MB4 | 5 |
TERY203124 ncbi | Trichodesmium erythraeum IMS101 | 4 |
TELO197221 ncbi | Thermosynechococcus elongatus BP-1 | 4 |
TDEN292415 ncbi | Thiobacillus denitrificans ATCC 25259 | 4 |
STYP99287 ncbi | Salmonella enterica enterica serovar Typhimurium str. LT2 | 5 |
SSP94122 ncbi | Shewanella sp. ANA-3 | 4 |
SSP64471 ncbi | Synechococcus sp. CC9311 | 4 |
SSP321332 ncbi | Synechococcus sp. JA-2-3Ba(2-13) | 4 |
SSP321327 ncbi | Synechococcus sp. JA-3-3Ab | 4 |
SSP1131 | Synechococcus sp. CC9605 | 4 |
SSON300269 ncbi | Shigella sonnei Ss046 | 5 |
SSED425104 ncbi | Shewanella sediminis HAW-EB3 | 4 |
SRUB309807 ncbi | Salinibacter ruber DSM 13855 | 4 |
SPRO399741 ncbi | Serratia proteamaculans 568 | 5 |
SPEA398579 ncbi | Shewanella pealeana ATCC 700345 | 4 |
SONE211586 ncbi | Shewanella oneidensis MR-1 | 4 |
SMEL266834 ncbi | Sinorhizobium meliloti 1021 | 4 |
SMED366394 ncbi | Sinorhizobium medicae WSM419 | 4 |
SLOI323850 ncbi | Shewanella loihica PV-4 | 4 |
SHIGELLA ncbi | Shigella flexneri 2a str. 2457T | 5 |
SHAL458817 ncbi | Shewanella halifaxensis HAW-EB4 | 4 |
SGLO343509 ncbi | Sodalis glossinidius morsitans | 4 |
SFLE373384 ncbi | Shigella flexneri 5 str. 8401 | 5 |
SFLE198214 ncbi | Shigella flexneri 2a str. 301 | 5 |
SENT454169 ncbi | Salmonella enterica enterica serovar Heidelberg str. SL476 | 5 |
SENT321314 ncbi | Salmonella enterica enterica serovar Choleraesuis str. SC-B67 | 5 |
SENT295319 ncbi | Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 | 5 |
SENT220341 ncbi | Salmonella enterica enterica serovar Typhi str. CT18 | 5 |
SENT209261 ncbi | Salmonella enterica enterica serovar Typhi str. Ty2 | 5 |
SELO269084 ncbi | Synechococcus elongatus PCC 6301 | 4 |
SDYS300267 ncbi | Shigella dysenteriae Sd197 | 5 |
SDEN318161 ncbi | Shewanella denitrificans OS217 | 4 |
SDEG203122 ncbi | Saccharophagus degradans 2-40 | 5 |
SBOY300268 ncbi | Shigella boydii Sb227 | 5 |
SBAL402882 ncbi | Shewanella baltica OS185 | 4 |
SBAL399599 ncbi | Shewanella baltica OS195 | 4 |
SALA317655 ncbi | Sphingopyxis alaskensis RB2256 | 4 |
SACI56780 ncbi | Syntrophus aciditrophicus SB | 4 |
RSPH349102 ncbi | Rhodobacter sphaeroides ATCC 17025 | 4 |
RSPH349101 ncbi | Rhodobacter sphaeroides ATCC 17029 | 4 |
RSPH272943 ncbi | Rhodobacter sphaeroides 2.4.1 | 4 |
RSOL267608 ncbi | Ralstonia solanacearum GMI1000 | 4 |
RRUB269796 ncbi | Rhodospirillum rubrum ATCC 11170 | 4 |
RPAL316058 ncbi | Rhodopseudomonas palustris HaA2 | 4 |
RPAL316057 ncbi | Rhodopseudomonas palustris BisB5 | 4 |
RPAL316056 ncbi | Rhodopseudomonas palustris BisB18 | 4 |
RPAL316055 ncbi | Rhodopseudomonas palustris BisA53 | 4 |
RPAL258594 ncbi | Rhodopseudomonas palustris CGA009 | 4 |
RMET266264 ncbi | Ralstonia metallidurans CH34 | 4 |
RLEG216596 ncbi | Rhizobium leguminosarum bv. viciae 3841 | 4 |
RFER338969 ncbi | Rhodoferax ferrireducens T118 | 4 |
REUT381666 ncbi | Ralstonia eutropha H16 | 5 |
REUT264198 ncbi | Ralstonia eutropha JMP134 | 4 |
RETL347834 ncbi | Rhizobium etli CFN 42 | 4 |
RCAS383372 ncbi | Roseiflexus castenholzii DSM 13941 | 4 |
PSYR223283 ncbi | Pseudomonas syringae pv. tomato str. DC3000 | 5 |
PSYR205918 ncbi | Pseudomonas syringae pv. syringae B728a | 5 |
PSTU379731 ncbi | Pseudomonas stutzeri A1501 | 5 |
PSP312153 ncbi | Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 | 4 |
PPUT76869 ncbi | Pseudomonas putida GB-1 | 4 |
PPUT351746 ncbi | Pseudomonas putida F1 | 4 |
PPUT160488 ncbi | Pseudomonas putida KT2440 | 4 |
PPRO298386 ncbi | Photobacterium profundum SS9 | 5 |
PMUL272843 ncbi | Pasteurella multocida multocida Pm70 | 4 |
PMEN399739 ncbi | Pseudomonas mendocina ymp | 5 |
PMAR93060 ncbi | Prochlorococcus marinus MIT 9215 | 4 |
PMAR74547 ncbi | Prochlorococcus marinus MIT 9313 | 4 |
PMAR74546 ncbi | Prochlorococcus marinus MIT 9312 | 4 |
PMAR59920 ncbi | Prochlorococcus marinus NATL2A | 4 |
PMAR167555 ncbi | Prochlorococcus marinus NATL1A | 4 |
PMAR167546 ncbi | Prochlorococcus marinus MIT 9301 | 4 |
PMAR167542 ncbi | Prochlorococcus marinus MIT 9515 | 4 |
PMAR167540 | Prochlorococcus marinus pastoris MED4ax | 4 |
PMAR167539 ncbi | Prochlorococcus marinus marinus CCMP1375 | 4 |
PMAR146891 ncbi | Prochlorococcus marinus AS9601 | 4 |
PLUM243265 ncbi | Photorhabdus luminescens laumondii TTO1 | 5 |
PING357804 ncbi | Psychromonas ingrahamii 37 | 5 |
PHAL326442 ncbi | Pseudoalteromonas haloplanktis TAC125 | 5 |
PFLU220664 ncbi | Pseudomonas fluorescens Pf-5 | 4 |
PFLU216595 ncbi | Pseudomonas fluorescens SBW25 | 4 |
PFLU205922 ncbi | Pseudomonas fluorescens Pf0-1 | 4 |
PENT384676 ncbi | Pseudomonas entomophila L48 | 4 |
PATL342610 ncbi | Pseudoalteromonas atlantica T6c | 4 |
PAER208964 ncbi | Pseudomonas aeruginosa PAO1 | 5 |
PAER208963 ncbi | Pseudomonas aeruginosa UCBPP-PA14 | 5 |
OIHE221109 ncbi | Oceanobacillus iheyensis HTE831 | 5 |
NSP103690 ncbi | Nostoc sp. PCC 7120 | 4 |
NOCE323261 ncbi | Nitrosococcus oceani ATCC 19707 | 4 |
NMEN374833 ncbi | Neisseria meningitidis 053442 | 5 |
NMEN272831 ncbi | Neisseria meningitidis FAM18 | 5 |
NMEN122587 ncbi | Neisseria meningitidis Z2491 | 5 |
NMEN122586 ncbi | Neisseria meningitidis MC58 | 5 |
NHAM323097 ncbi | Nitrobacter hamburgensis X14 | 4 |
NGON242231 ncbi | Neisseria gonorrhoeae FA 1090 | 5 |
NEUT335283 ncbi | Nitrosomonas eutropha C91 | 4 |
NARO279238 ncbi | Novosphingobium aromaticivorans DSM 12444 | 4 |
MSUC221988 ncbi | Mannheimia succiniciproducens MBEL55E | 4 |
MSP400668 ncbi | Marinomonas sp. MWYL1 | 4 |
MSP266779 ncbi | Chelativorans sp. BNC1 | 4 |
MPET420662 ncbi | Methylibium petroleiphilum PM1 | 4 |
MMAR394221 ncbi | Maricaulis maris MCS10 | 4 |
MLOT266835 ncbi | Mesorhizobium loti MAFF303099 | 4 |
MCAP243233 ncbi | Methylococcus capsulatus Bath | 4 |
MAQU351348 ncbi | Marinobacter aquaeolei VT8 | 5 |
MAER449447 ncbi | Microcystis aeruginosa NIES-843 | 4 |
LWEL386043 ncbi | Listeria welshimeri serovar 6b str. SLCC5334 | 4 |
LSPH444177 ncbi | Lysinibacillus sphaericus C3-41 | 5 |
LPNE400673 ncbi | Legionella pneumophila Corby | 4 |
LPNE297246 ncbi | Legionella pneumophila Paris | 4 |
LPNE297245 ncbi | Legionella pneumophila Lens | 4 |
LPNE272624 ncbi | Legionella pneumophila pneumophila Philadelphia 1 | 4 |
LINT363253 ncbi | Lawsonia intracellularis PHE/MN1-00 | 4 |
KPNE272620 ncbi | Klebsiella pneumoniae pneumoniae MGH 78578 | 5 |
JSP375286 ncbi | Janthinobacterium sp. Marseille | 4 |
ILOI283942 ncbi | Idiomarina loihiensis L2TR | 4 |
HSOM228400 ncbi | Haemophilus somnus 2336 | 4 |
HSOM205914 ncbi | Haemophilus somnus 129PT | 4 |
HINF71421 ncbi | Haemophilus influenzae Rd KW20 | 4 |
HINF374930 ncbi | Haemophilus influenzae PittEE | 4 |
HINF281310 ncbi | Haemophilus influenzae 86-028NP | 4 |
HHAL349124 ncbi | Halorhodospira halophila SL1 | 4 |
HDUC233412 ncbi | Haemophilus ducreyi 35000HP | 4 |
HCHE349521 ncbi | Hahella chejuensis KCTC 2396 | 5 |
HARS204773 ncbi | Herminiimonas arsenicoxydans | 4 |
GTHE420246 ncbi | Geobacillus thermodenitrificans NG80-2 | 5 |
GKAU235909 ncbi | Geobacillus kaustophilus HTA426 | 5 |
FTUL458234 ncbi | Francisella tularensis holarctica FTNF002-00 | 4 |
FTUL418136 ncbi | Francisella tularensis tularensis WY96-3418 | 4 |
FTUL401614 ncbi | Francisella novicida U112 | 4 |
FTUL393115 ncbi | Francisella tularensis tularensis FSC198 | 4 |
FTUL393011 ncbi | Francisella tularensis holarctica OSU18 | 4 |
FTUL351581 | Francisella tularensis holarctica FSC200 | 4 |
FRANT ncbi | Francisella tularensis tularensis SCHU S4 | 4 |
FPHI484022 ncbi | Francisella philomiragia philomiragia ATCC 25017 | 4 |
ESP42895 | Enterobacter sp. | 5 |
EFER585054 ncbi | Escherichia fergusonii ATCC 35469 | 5 |
ECOO157 ncbi | Escherichia coli O157:H7 EDL933 | 5 |
ECOL83334 | Escherichia coli O157:H7 | 5 |
ECOL585397 ncbi | Escherichia coli ED1a | 5 |
ECOL585057 ncbi | Escherichia coli IAI39 | 5 |
ECOL585056 ncbi | Escherichia coli UMN026 | 5 |
ECOL585055 ncbi | Escherichia coli 55989 | 5 |
ECOL585035 ncbi | Escherichia coli S88 | 5 |
ECOL585034 ncbi | Escherichia coli IAI1 | 5 |
ECOL481805 ncbi | Escherichia coli ATCC 8739 | 5 |
ECOL469008 ncbi | Escherichia coli BL21(DE3) | 5 |
ECOL439855 ncbi | Escherichia coli SMS-3-5 | 5 |
ECOL413997 ncbi | Escherichia coli B str. REL606 | 5 |
ECOL409438 ncbi | Escherichia coli SE11 | 5 |
ECOL405955 ncbi | Escherichia coli APEC O1 | 5 |
ECOL364106 ncbi | Escherichia coli UTI89 | 5 |
ECOL362663 ncbi | Escherichia coli 536 | 5 |
ECOL331111 ncbi | Escherichia coli E24377A | 5 |
ECOL316407 ncbi | Escherichia coli K-12 substr. W3110 | 5 |
ECOL199310 ncbi | Escherichia coli CFT073 | 5 |
ECAR218491 ncbi | Pectobacterium atrosepticum SCRI1043 | 5 |
DVUL882 ncbi | Desulfovibrio vulgaris Hildenborough | 5 |
DNOD246195 ncbi | Dichelobacter nodosus VCS1703A | 4 |
DGEO319795 ncbi | Deinococcus geothermalis DSM 11300 | 5 |
DDES207559 ncbi | Desulfovibrio desulfuricans desulfuricans G20 | 5 |
DARO159087 ncbi | Dechloromonas aromatica RCB | 4 |
CVIO243365 ncbi | Chromobacterium violaceum ATCC 12472 | 5 |
CTET212717 ncbi | Clostridium tetani E88 | 4 |
CSP501479 | Citreicella sp. SE45 | 4 |
CSAL290398 ncbi | Chromohalobacter salexigens DSM 3043 | 5 |
CPSY167879 ncbi | Colwellia psychrerythraea 34H | 4 |
CPHY357809 ncbi | Clostridium phytofermentans ISDg | 4 |
CJAP155077 | Cellvibrio japonicus | 5 |
CBUR434922 ncbi | Coxiella burnetii Dugway 5J108-111 | 4 |
CBUR360115 ncbi | Coxiella burnetii RSA 331 | 4 |
CBUR227377 ncbi | Coxiella burnetii RSA 493 | 4 |
CBLO291272 ncbi | Candidatus Blochmannia pennsylvanicus BPEN | 4 |
CBLO203907 ncbi | Candidatus Blochmannia floridanus | 4 |
CBEI290402 ncbi | Clostridium beijerinckii NCIMB 8052 | 4 |
CACE272562 ncbi | Clostridium acetobutylicum ATCC 824 | 4 |
BWEI315730 ncbi | Bacillus weihenstephanensis KBAB4 | 4 |
BVIE269482 ncbi | Burkholderia vietnamiensis G4 | 4 |
BTHU412694 ncbi | Bacillus thuringiensis Al Hakam | 4 |
BTHU281309 ncbi | Bacillus thuringiensis serovar konkukian str. 97-27 | 4 |
BTHA271848 ncbi | Burkholderia thailandensis E264 | 4 |
BSUI470137 ncbi | Brucella suis ATCC 23445 | 4 |
BSUI204722 ncbi | Brucella suis 1330 | 4 |
BSUB ncbi | Bacillus subtilis subtilis 168 | 4 |
BSP376 | Bradyrhizobium sp. | 4 |
BSP36773 | Burkholderia sp. | 4 |
BSP107806 ncbi | Buchnera aphidicola APS (Acyrthosiphon pisum) | 4 |
BPUM315750 ncbi | Bacillus pumilus SAFR-032 | 5 |
BPSE320373 ncbi | Burkholderia pseudomallei 668 | 4 |
BPSE320372 ncbi | Burkholderia pseudomallei 1710b | 4 |
BPSE272560 ncbi | Burkholderia pseudomallei K96243 | 4 |
BPET94624 | Bordetella petrii | 4 |
BPER257313 ncbi | Bordetella pertussis Tohama I | 4 |
BPAR257311 ncbi | Bordetella parapertussis 12822 | 4 |
BOVI236 | Brucella ovis | 4 |
BMEL359391 ncbi | Brucella melitensis biovar Abortus 2308 | 4 |
BMEL224914 ncbi | Brucella melitensis bv. 1 str. 16M | 4 |
BMAL320389 ncbi | Burkholderia mallei NCTC 10247 | 4 |
BMAL320388 ncbi | Burkholderia mallei SAVP1 | 4 |
BMAL243160 ncbi | Burkholderia mallei ATCC 23344 | 4 |
BLIC279010 ncbi | Bacillus licheniformis ATCC 14580 | 5 |
BHAL272558 ncbi | Bacillus halodurans C-125 | 5 |
BCLA66692 ncbi | Bacillus clausii KSM-K16 | 5 |
BCIC186490 | Candidatus Baumannia cicadellinicola | 4 |
BCER572264 ncbi | Bacillus cereus 03BB102 | 4 |
BCER405917 | Bacillus cereus W | 4 |
BCER315749 ncbi | Bacillus cytotoxicus NVH 391-98 | 4 |
BCER288681 ncbi | Bacillus cereus E33L | 4 |
BCEN331272 ncbi | Burkholderia cenocepacia HI2424 | 4 |
BCEN331271 ncbi | Burkholderia cenocepacia AU 1054 | 4 |
BCAN483179 ncbi | Brucella canis ATCC 23365 | 4 |
BBRO257310 ncbi | Bordetella bronchiseptica RB50 | 4 |
BAPH372461 ncbi | Buchnera aphidicola Cc (Cinara cedri) | 4 |
BAPH198804 ncbi | Buchnera aphidicola Sg (Schizaphis graminum) | 4 |
BANT592021 ncbi | Bacillus anthracis A0248 | 4 |
BANT568206 ncbi | Bacillus anthracis CDC 684 | 4 |
BANT261594 ncbi | Bacillus anthracis Ames Ancestor | 4 |
BANT260799 ncbi | Bacillus anthracis Sterne | 4 |
BAMY326423 ncbi | Bacillus amyloliquefaciens FZB42 | 4 |
BAMB398577 ncbi | Burkholderia ambifaria MC40-6 | 4 |
BAMB339670 ncbi | Burkholderia ambifaria AMMD | 4 |
BABO262698 ncbi | Brucella abortus bv. 1 str. 9-941 | 4 |
AVAR240292 ncbi | Anabaena variabilis ATCC 29413 | 4 |
ASP76114 ncbi | Aromatoleum aromaticum EbN1 | 4 |
ASP62977 ncbi | Acinetobacter sp. ADP1 | 5 |
ASP62928 ncbi | Azoarcus sp. BH72 | 5 |
ASAL382245 ncbi | Aeromonas salmonicida salmonicida A449 | 5 |
APLE434271 ncbi | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 4 |
APLE416269 ncbi | Actinobacillus pleuropneumoniae L20 | 4 |
AMET293826 ncbi | Alkaliphilus metalliredigens QYMF | 4 |
AHYD196024 | Aeromonas hydrophila dhakensis | 5 |
AFER243159 ncbi | Acidithiobacillus ferrooxidans ATCC 23270 | 4 |
AEHR187272 ncbi | Alkalilimnicola ehrlichii MLHE-1 | 4 |
ACRY349163 ncbi | Acidiphilium cryptum JF-5 | 4 |
ABOR393595 ncbi | Alcanivorax borkumensis SK2 | 4 |
ABAU360910 ncbi | Bordetella avium 197N | 4 |
AAVE397945 ncbi | Acidovorax citrulli AAC00-1 | 4 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 0.0096657 | 29 | 92 |
Disease:Bubonic_plague | 0.0049313 | 6 | 6 |
Disease:Dysentery | 0.0049313 | 6 | 6 |
Disease:Gastroenteritis | 0.0015239 | 11 | 13 |
Endospores:No | 1.087e-20 | 36 | 211 |
GC_Content_Range4:0-40 | 2.009e-10 | 53 | 213 |
GC_Content_Range4:40-60 | 1.341e-6 | 120 | 224 |
GC_Content_Range7:0-30 | 0.0000367 | 7 | 47 |
GC_Content_Range7:30-40 | 6.718e-6 | 46 | 166 |
GC_Content_Range7:50-60 | 6.266e-7 | 67 | 107 |
GC_Content_Range7:60-70 | 0.0023196 | 69 | 134 |
Genome_Size_Range5:0-2 | 2.749e-14 | 26 | 155 |
Genome_Size_Range5:2-4 | 0.0004651 | 64 | 197 |
Genome_Size_Range5:4-6 | 5.616e-16 | 121 | 184 |
Genome_Size_Range5:6-10 | 0.0002591 | 31 | 47 |
Genome_Size_Range9:0-1 | 0.0066151 | 5 | 27 |
Genome_Size_Range9:1-2 | 7.808e-12 | 21 | 128 |
Genome_Size_Range9:2-3 | 0.0000722 | 32 | 120 |
Genome_Size_Range9:4-5 | 1.117e-6 | 61 | 96 |
Genome_Size_Range9:5-6 | 2.937e-8 | 60 | 88 |
Genome_Size_Range9:6-8 | 1.136e-6 | 30 | 38 |
Gram_Stain:Gram_Neg | 4.812e-20 | 191 | 333 |
Gram_Stain:Gram_Pos | 3.506e-13 | 26 | 150 |
Habitat:Host-associated | 0.0000986 | 65 | 206 |
Habitat:Multiple | 0.0003230 | 92 | 178 |
Motility:No | 9.783e-13 | 27 | 151 |
Motility:Yes | 1.435e-9 | 146 | 267 |
Optimal_temp.:- | 0.0000143 | 131 | 257 |
Optimal_temp.:35-37 | 8.953e-6 | 13 | 13 |
Optimal_temp.:37 | 0.0027314 | 32 | 106 |
Oxygen_Req:Anaerobic | 5.384e-12 | 13 | 102 |
Oxygen_Req:Facultative | 1.337e-8 | 115 | 201 |
Oxygen_Req:Microaerophilic | 0.0044925 | 2 | 18 |
Pathogenic_in:Animal | 0.0000672 | 42 | 66 |
Shape:Coccobacillus | 0.0008899 | 10 | 11 |
Shape:Coccus | 7.228e-8 | 13 | 82 |
Shape:Rod | 1.930e-13 | 186 | 347 |
Shape:Sphere | 0.0028882 | 2 | 19 |
Shape:Spiral | 2.015e-6 | 2 | 34 |
Temp._range:Hyperthermophilic | 0.0000557 | 1 | 23 |
Temp._range:Mesophilic | 0.0061267 | 207 | 473 |
Org ID | Org Name | # genes in group found in org |
WSUC273121 ncbi | Wolinella succinogenes DSM 1740 | 1 |
WPIP955 | Wolbachia pipientis | 0 |
WPIP80849 | Wolbachia endosymbiont of Brugia malayi | 0 |
UURE95667 | Ureaplasma urealyticum serovar 13 | 1 |
UURE95664 | Ureaplasma urealyticum serovar 10 | 1 |
UPAR505682 ncbi | Ureaplasma parvum serovar 3 str. ATCC 27815 | 1 |
UMET351160 ncbi | uncultured methanogenic archaeon RC-I | 0 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 1 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 1 |
TVOL273116 ncbi | Thermoplasma volcanium GSS1 | 0 |
TPEN368408 ncbi | Thermofilum pendens Hrk 5 | 0 |
TPAL243276 ncbi | Treponema pallidum pallidum Nichols | 0 |
TLET416591 ncbi | Thermotoga lettingae TMO | 1 |
TKOD69014 ncbi | Thermococcus kodakarensis KOD1 | 0 |
TDEN243275 ncbi | Treponema denticola ATCC 35405 | 1 |
TACI273075 ncbi | Thermoplasma acidophilum DSM 1728 | 0 |
STOK273063 ncbi | Sulfolobus tokodaii 7 | 0 |
SSUI391295 ncbi | Streptococcus suis 05ZYH33 | 1 |
SSOL273057 ncbi | Sulfolobus solfataricus P2 | 0 |
SPYO370554 ncbi | Streptococcus pyogenes MGAS10750 | 1 |
SMAR399550 ncbi | Staphylothermus marinus F1 | 0 |
SHAE279808 ncbi | Staphylococcus haemolyticus JCSC1435 | 1 |
SGOR29390 | Streptococcus gordonii Challis | 1 |
SEPI176280 ncbi | Staphylococcus epidermidis ATCC 12228 | 1 |
SEPI176279 ncbi | Staphylococcus epidermidis RP62A | 1 |
SAUR359787 ncbi | Staphylococcus aureus aureus JH1 | 1 |
SAUR359786 ncbi | Staphylococcus aureus aureus JH9 | 1 |
SACI330779 ncbi | Sulfolobus acidocaldarius DSM 639 | 0 |
RXYL266117 ncbi | Rubrobacter xylanophilus DSM 9941 | 1 |
RTYP257363 ncbi | Rickettsia typhi Wilmington | 0 |
RRIC452659 ncbi | Rickettsia rickettsii Iowa | 0 |
RRIC392021 ncbi | Rickettsia rickettsii Sheila Smith | 0 |
RPRO272947 ncbi | Rickettsia prowazekii Madrid E | 0 |
RPOM246200 ncbi | Ruegeria pomeroyi DSS-3 | 1 |
RMAS416276 ncbi | Rickettsia massiliae MTU5 | 0 |
RFEL315456 ncbi | Rickettsia felis URRWXCal2 | 0 |
RDEN375451 ncbi | Roseobacter denitrificans OCh 114 | 1 |
RCON272944 ncbi | Rickettsia conorii Malish 7 | 0 |
RCAN293613 ncbi | Rickettsia canadensis McKiel | 0 |
RBEL391896 ncbi | Rickettsia bellii OSU 85-389 | 0 |
RBEL336407 ncbi | Rickettsia bellii RML369-C | 0 |
RAKA293614 ncbi | Rickettsia akari Hartford | 0 |
PTOR263820 ncbi | Picrophilus torridus DSM 9790 | 0 |
PRUM264731 ncbi | Prevotella ruminicola 23 | 0 |
PPEN278197 ncbi | Pediococcus pentosaceus ATCC 25745 | 1 |
PISL384616 ncbi | Pyrobaculum islandicum DSM 4184 | 0 |
PINT246198 | Prevotella intermedia 17 | 0 |
PHOR70601 ncbi | Pyrococcus horikoshii OT3 | 0 |
PGIN242619 ncbi | Porphyromonas gingivalis W83 | 0 |
PFUR186497 ncbi | Pyrococcus furiosus DSM 3638 | 0 |
PDIS435591 ncbi | Parabacteroides distasonis ATCC 8503 | 0 |
PAST100379 | Onion yellows phytoplasma | 1 |
PARS340102 ncbi | Pyrobaculum arsenaticum DSM 13514 | 0 |
PAER178306 ncbi | Pyrobaculum aerophilum IM2 | 0 |
PABY272844 ncbi | Pyrococcus abyssi GE5 | 0 |
OTSU357244 ncbi | Orientia tsutsugamushi Boryong | 0 |
NSP387092 ncbi | Nitratiruptor sp. SB155-2 | 1 |
NSP35761 | Nocardioides sp. | 1 |
NSEN222891 ncbi | Neorickettsia sennetsu Miyayama | 1 |
NPHA348780 ncbi | Natronomonas pharaonis DSM 2160 | 0 |
NFAR247156 ncbi | Nocardia farcinica IFM 10152 | 1 |
MXAN246197 ncbi | Myxococcus xanthus DK 1622 | 1 |
MTUB419947 ncbi | Mycobacterium tuberculosis H37Ra | 1 |
MTUB336982 ncbi | Mycobacterium tuberculosis F11 | 1 |
MTHE349307 ncbi | Methanosaeta thermophila PT | 0 |
MTHE187420 ncbi | Methanothermobacter thermautotrophicus Delta H | 0 |
MTBRV ncbi | Mycobacterium tuberculosis H37Rv | 1 |
MTBCDC ncbi | Mycobacterium tuberculosis CDC1551 | 1 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 1 |
MSTA339860 ncbi | Methanosphaera stadtmanae DSM 3091 | 0 |
MSED399549 ncbi | Metallosphaera sedula DSM 5348 | 0 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 1 |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 1 |
MPEN272633 ncbi | Mycoplasma penetrans HF-2 | 1 |
MMYC272632 ncbi | Mycoplasma mycoides mycoides SC str. PG1 | 0 |
MMOB267748 ncbi | Mycoplasma mobile 163K | 0 |
MMAZ192952 ncbi | Methanosarcina mazei Go1 | 0 |
MMAR444158 ncbi | Methanococcus maripaludis C6 | 0 |
MMAR426368 ncbi | Methanococcus maripaludis C7 | 0 |
MMAR402880 ncbi | Methanococcus maripaludis C5 | 0 |
MMAR368407 ncbi | Methanoculleus marisnigri JR1 | 0 |
MMAR267377 ncbi | Methanococcus maripaludis S2 | 0 |
MLAB410358 ncbi | Methanocorpusculum labreanum Z | 0 |
MKAN190192 ncbi | Methanopyrus kandleri AV19 | 0 |
MJAN243232 ncbi | Methanocaldococcus jannaschii DSM 2661 | 0 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 1 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 1 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 1 |
MHUN323259 ncbi | Methanospirillum hungatei JF-1 | 0 |
MGEN243273 ncbi | Mycoplasma genitalium G37 | 1 |
MFLO265311 ncbi | Mesoplasma florum L1 | 0 |
MCAP340047 ncbi | Mycoplasma capricolum capricolum ATCC 27343 | 0 |
MBUR259564 ncbi | Methanococcoides burtonii DSM 6242 | 0 |
MBOV410289 ncbi | Mycobacterium bovis BCG str. Pasteur 1173P2 | 1 |
MBOV233413 ncbi | Mycobacterium bovis AF2122/97 | 1 |
MBAR269797 ncbi | Methanosarcina barkeri Fusaro | 0 |
MAVI243243 ncbi | Mycobacterium avium 104 | 1 |
MART243272 ncbi | Mycoplasma arthritidis 158L3-1 | 0 |
MAEO419665 ncbi | Methanococcus aeolicus Nankai-3 | 0 |
MACE188937 ncbi | Methanosarcina acetivorans C2A | 0 |
LXYL281090 ncbi | Leifsonia xyli xyli CTCB07 | 1 |
LSAK314315 ncbi | Lactobacillus sakei sakei 23K | 1 |
LREU557436 ncbi | Lactobacillus reuteri DSM 20016 | 1 |
LPLA220668 ncbi | Lactobacillus plantarum WCFS1 | 1 |
LMES203120 ncbi | Leuconostoc mesenteroides mesenteroides ATCC 8293 | 0 |
LLAC272623 ncbi | Lactococcus lactis lactis Il1403 | 1 |
LLAC272622 ncbi | Lactococcus lactis cremoris SK11 | 1 |
LJOH257314 ncbi | Lactobacillus johnsonii NCC 533 | 1 |
LINT267671 ncbi | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | 1 |
LINT189518 ncbi | Leptospira interrogans serovar Lai str. 56601 | 1 |
LHEL405566 ncbi | Lactobacillus helveticus DPC 4571 | 0 |
LGAS324831 ncbi | Lactobacillus gasseri ATCC 33323 | 1 |
LDEL390333 ncbi | Lactobacillus delbrueckii bulgaricus ATCC 11842 | 0 |
LDEL321956 ncbi | Lactobacillus delbrueckii bulgaricus ATCC BAA-365 | 0 |
LCAS321967 ncbi | Lactobacillus casei ATCC 334 | 1 |
LBRE387344 ncbi | Lactobacillus brevis ATCC 367 | 1 |
LBOR355277 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis JB197 | 1 |
LBOR355276 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis L550 | 1 |
LBIF456481 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) | 1 |
LBIF355278 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) | 1 |
LACI272621 ncbi | Lactobacillus acidophilus NCFM | 0 |
IHOS453591 ncbi | Ignicoccus hospitalis KIN4/I | 0 |
HWAL362976 ncbi | Haloquadratum walsbyi DSM 16790 | 1 |
HSP64091 ncbi | Halobacterium sp. NRC-1 | 0 |
HSAL478009 ncbi | Halobacterium salinarum R1 | 0 |
HPYL85963 ncbi | Helicobacter pylori J99 | 1 |
HPYL357544 ncbi | Helicobacter pylori HPAG1 | 1 |
HPY ncbi | Helicobacter pylori 26695 | 1 |
HMUK485914 ncbi | Halomicrobium mukohataei DSM 12286 | 0 |
HMAR272569 ncbi | Haloarcula marismortui ATCC 43049 | 0 |
HHEP235279 ncbi | Helicobacter hepaticus ATCC 51449 | 1 |
HBUT415426 ncbi | Hyperthermus butylicus DSM 5456 | 0 |
HACI382638 ncbi | Helicobacter acinonychis Sheeba | 1 |
GFOR411154 ncbi | Gramella forsetii KT0803 | 1 |
FSUC59374 ncbi | Fibrobacter succinogenes succinogenes S85 | 0 |
FNUC190304 ncbi | Fusobacterium nucleatum nucleatum ATCC 25586 | 0 |
FNOD381764 ncbi | Fervidobacterium nodosum Rt17-B1 | 0 |
FMAG334413 ncbi | Finegoldia magna ATCC 29328 | 1 |
FJOH376686 ncbi | Flavobacterium johnsoniae UW101 | 1 |
ERUM302409 ncbi | Ehrlichia ruminantium Gardel | 0 |
ERUM254945 ncbi | Ehrlichia ruminantium Welgevonden | 0 |
ECHA205920 ncbi | Ehrlichia chaffeensis Arkansas | 1 |
ECAN269484 ncbi | Ehrlichia canis Jake | 0 |
DPSY177439 ncbi | Desulfotalea psychrophila LSv54 | 1 |
CTRA471473 ncbi | Chlamydia trachomatis L2b/UCH-1/proctitis | 0 |
CTRA471472 ncbi | Chlamydia trachomatis 434/Bu | 0 |
CSUL444179 ncbi | Candidatus Sulcia muelleri GWSS | 0 |
CSP78 | Caulobacter sp. | 1 |
CPRO264201 ncbi | Candidatus Protochlamydia amoebophila UWE25 | 1 |
CPNE182082 ncbi | Chlamydophila pneumoniae TW-183 | 0 |
CPNE138677 ncbi | Chlamydophila pneumoniae J138 | 0 |
CPNE115713 ncbi | Chlamydophila pneumoniae CWL029 | 0 |
CPNE115711 ncbi | Chlamydophila pneumoniae AR39 | 0 |
CPEL335992 ncbi | Candidatus Pelagibacter ubique HTCC1062 | 0 |
CMUR243161 ncbi | Chlamydia muridarum Nigg | 0 |
CMET456442 ncbi | Candidatus Methanoregula boonei 6A8 | 0 |
CMAQ397948 ncbi | Caldivirga maquilingensis IC-167 | 0 |
CKOR374847 ncbi | Candidatus Korarchaeum cryptofilum OPF8 | 0 |
CHOM360107 ncbi | Campylobacter hominis ATCC BAA-381 | 1 |
CFEL264202 ncbi | Chlamydophila felis Fe/C-56 | 0 |
CCUR360105 ncbi | Campylobacter curvus 525.92 | 1 |
CCON360104 ncbi | Campylobacter concisus 13826 | 1 |
CCAV227941 ncbi | Chlamydophila caviae GPIC | 0 |
CABO218497 ncbi | Chlamydophila abortus S26/3 | 0 |
BTHE226186 ncbi | Bacteroides thetaiotaomicron VPI-5482 | 0 |
BLON206672 ncbi | Bifidobacterium longum NCC2705 | 1 |
BFRA295405 ncbi | Bacteroides fragilis YCH46 | 0 |
BFRA272559 ncbi | Bacteroides fragilis NCTC 9343 | 0 |
AYEL322098 ncbi | Aster yellows witches-broom phytoplasma AYWB | 1 |
AURANTIMONAS | Aurantimonas manganoxydans SI85-9A1 | 0 |
APHA212042 ncbi | Anaplasma phagocytophilum HZ | 0 |
APER272557 ncbi | Aeropyrum pernix K1 | 0 |
AMAR234826 ncbi | Anaplasma marginale St. Maries | 0 |
AFUL224325 ncbi | Archaeoglobus fulgidus DSM 4304 | 0 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 0.0008366 | 14 | 92 |
Arrangment:Pairs | 0.0021833 | 20 | 112 |
Disease:Leptospirosis | 0.0060978 | 4 | 4 |
Disease:Pharyngitis | 0.0000346 | 8 | 8 |
Disease:bronchitis_and_pneumonitis | 0.0000346 | 8 | 8 |
Endospores:No | 3.779e-9 | 90 | 211 |
Endospores:Yes | 2.509e-6 | 2 | 53 |
GC_Content_Range4:0-40 | 9.839e-7 | 85 | 213 |
GC_Content_Range4:60-100 | 2.053e-6 | 20 | 145 |
GC_Content_Range7:0-30 | 0.0021716 | 22 | 47 |
GC_Content_Range7:30-40 | 0.0003728 | 63 | 166 |
GC_Content_Range7:40-50 | 0.0011617 | 46 | 117 |
GC_Content_Range7:50-60 | 2.910e-6 | 12 | 107 |
GC_Content_Range7:60-70 | 3.505e-6 | 18 | 134 |
Genome_Size_Range5:0-2 | 1.127e-21 | 91 | 155 |
Genome_Size_Range5:4-6 | 1.000e-12 | 18 | 184 |
Genome_Size_Range5:6-10 | 0.0005269 | 4 | 47 |
Genome_Size_Range9:0-1 | 0.0000187 | 18 | 27 |
Genome_Size_Range9:1-2 | 2.374e-15 | 73 | 128 |
Genome_Size_Range9:4-5 | 0.0003677 | 14 | 96 |
Genome_Size_Range9:5-6 | 1.674e-9 | 4 | 88 |
Genome_Size_Range9:6-8 | 0.0013986 | 3 | 38 |
Gram_Stain:Gram_Neg | 0.0000962 | 74 | 333 |
Habitat:Host-associated | 1.827e-8 | 87 | 206 |
Habitat:Multiple | 3.353e-8 | 24 | 178 |
Habitat:Specialized | 0.0023511 | 24 | 53 |
Habitat:Terrestrial | 0.0021128 | 2 | 31 |
Motility:Yes | 7.058e-6 | 52 | 267 |
Optimal_temp.:- | 0.0007422 | 56 | 257 |
Optimal_temp.:37 | 0.0001847 | 45 | 106 |
Optimal_temp.:85 | 0.0060978 | 4 | 4 |
Oxygen_Req:Anaerobic | 3.500e-6 | 48 | 102 |
Oxygen_Req:Facultative | 0.0007582 | 41 | 201 |
Shape:Irregular_coccus | 2.505e-7 | 15 | 17 |
Shape:Rod | 8.410e-7 | 72 | 347 |
Shape:Sphere | 3.468e-7 | 16 | 19 |
Shape:Spiral | 0.0076709 | 16 | 34 |
Temp._range:Hyperthermophilic | 4.519e-7 | 18 | 23 |
Temp._range:Mesophilic | 0.0002357 | 118 | 473 |
Pathway or complex | # Orgs containing it | # of those orgs also containing candidate | Pearson Coeff |
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis) | 218 | 174 | 0.5775 |
GLYCOCAT-PWY (glycogen degradation I) | 246 | 179 | 0.5200 |
PWY-5913 (TCA cycle variation IV) | 301 | 202 | 0.5113 |
PWY-4041 (γ-glutamyl cycle) | 279 | 192 | 0.5075 |
PWY-5918 (heme biosynthesis I) | 272 | 187 | 0.4949 |
GLUTATHIONESYN-PWY (glutathione biosynthesis) | 339 | 214 | 0.4893 |
AST-PWY (arginine degradation II (AST pathway)) | 120 | 107 | 0.4773 |
PWY-5340 (sulfate activation for sulfonation) | 385 | 229 | 0.4754 |
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I) | 286 | 190 | 0.4745 |
NAGLIPASYN-PWY (lipid IVA biosynthesis) | 348 | 214 | 0.4665 |
PWY-5386 (methylglyoxal degradation I) | 305 | 196 | 0.4612 |
SO4ASSIM-PWY (sulfate reduction I (assimilatory)) | 311 | 198 | 0.4581 |
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I) | 422 | 239 | 0.4578 |
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate)) | 300 | 193 | 0.4553 |
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis) | 365 | 218 | 0.4505 |
GLUTAMINDEG-PWY (glutamine degradation I) | 191 | 141 | 0.4423 |
ECASYN-PWY (enterobacterial common antigen biosynthesis) | 191 | 141 | 0.4423 |
PWY-5188 (tetrapyrrole biosynthesis I) | 439 | 242 | 0.4406 |
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I) | 195 | 141 | 0.4283 |
LIPA-CORESYN-PWY (Lipid A-core biosynthesis) | 176 | 131 | 0.4252 |
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic)) | 398 | 226 | 0.4242 |
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I) | 249 | 166 | 0.4241 |
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff) | 249 | 166 | 0.4241 |
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation) | 149 | 116 | 0.4189 |
PWY-5938 ((R)-acetoin biosynthesis I) | 376 | 217 | 0.4168 |
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic)) | 291 | 183 | 0.4147 |
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic)) | 183 | 133 | 0.4140 |
PWY0-862 (cis-dodecenoyl biosynthesis) | 343 | 204 | 0.4136 |
PHOSLIPSYN-PWY (phospholipid biosynthesis I) | 290 | 182 | 0.4110 |
PWY-1269 (CMP-KDO biosynthesis I) | 325 | 196 | 0.4079 |
PWY0-1319 (CDP-diacylglycerol biosynthesis II) | 296 | 184 | 0.4075 |
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage) | 329 | 197 | 0.4039 |
TYRFUMCAT-PWY (tyrosine degradation I) | 184 | 132 | 0.4033 |
EG11427 | EG10703 | EG10368 | EG10282 | |
EG12100 | 0.999991 | 0.999616 | 0.999658 | 0.99864 |
EG11427 | 0.999634 | 0.999694 | 0.998607 | |
EG10703 | 0.999876 | 0.999424 | ||
EG10368 | 0.998624 | |||
EG10282 |
EG12100 | EG11427 | EG10703 | EG10368 | EG10282 | |
EG12100 | 0.0f0 | 0 | - | - | - |
EG11427 | 0 | 0.0f0 | - | - | - |
EG10703 | - | - | 0.0f0 | - | - |
EG10368 | - | - | - | 0.0f0 | - |
EG10282 | - | - | - | - | 0.0f0 |