CANDIDATE ID: 724

CANDIDATE ID: 724

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9899020e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7747 (gntX) (b3413)
   Products of gene:
     - G7747-MONOMER (protein involved in utilization of DNA as a carbon source)

- EG10512 (kbl) (b3617)
   Products of gene:
     - AKBLIG-MONOMER (Kbl)
     - AKBLIG-CPLX (2-amino-3-ketobutyrate CoA ligase)
       Reactions:
        glycine + acetyl-CoA  =  2-amino-3-oxobutanoate + coenzyme A + H+
         In pathways
         THREOCAT-PWY (superpathway of threonine metabolism)
         THREONINE-DEG2-PWY (threonine degradation II)

- EG10122 (bioH) (bioH)
   Products of gene:
     - EG10122-MONOMER (carboxylesterase)
       Reactions:
        a pimeloyl-[acp] methyl ester + H2O  ->  a pimeloyl-[acp] + methanol
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        a carboxylic ester + H2O  =  an alcohol + a carboxylate

- EG10119 (bioC) (bioC)
   Products of gene:
     - EG10119-MONOMER (BioC methyltransferase)
       Reactions:
        malonyl-CoA + S-adenosyl-L-methionine  ->  malonyl-CoA methyl ester + S-adenosyl-L-homocysteine
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)

- EG10118 (bioB) (bioB)
   Products of gene:
     - BIOTIN-SYN-MONOMER (biotin synthase monomer)
     - BIOTIN-SYN-CPLX (biotin synthase)
       Reactions:
        a sulfurated sulfur donor + dethiobiotin + 2 S-adenosyl-L-methionine  ->  an unsulfurated sulfur acceptor + biotin + 2 5'-deoxyadenosine + 2 L-methionine
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY0-1507 (biotin biosynthesis from 7-keto-8-aminopelargonate)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 221
Effective number of orgs (counting one per cluster within 468 clusters): 151

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1144
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TERY203124 ncbi Trichodesmium erythraeum IMS1015
TELO197221 ncbi Thermosynechococcus elongatus BP-14
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B4
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SRUB309807 ncbi Salinibacter ruber DSM 138554
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46804
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1344
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PGIN242619 ncbi Porphyromonas gingivalis W834
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PDIS435591 ncbi Parabacteroides distasonis ATCC 85034
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NSP35761 Nocardioides sp.4
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
MXAN246197 ncbi Myxococcus xanthus DK 16225
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
MAER449447 ncbi Microcystis aeruginosa NIES-8434
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HHAL349124 ncbi Halorhodospira halophila SL15
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
HARS204773 ncbi Herminiimonas arsenicoxydans5
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GFOR411154 ncbi Gramella forsetii KT08034
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CTEP194439 ncbi Chlorobium tepidum TLS4
CSP78 Caulobacter sp.5
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CJAP155077 Cellvibrio japonicus5
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4934
CAULO ncbi Caulobacter crescentus CB154
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1684
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHAL272558 ncbi Bacillus halodurans C-1254
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233654
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62928 ncbi Azoarcus sp. BH725
ASP1667 Arthrobacter sp.4
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  G7747   EG10512   EG10122   EG10119   EG10118   
YPSE349747 YPSIP31758_3989YPSIP31758_0071YPSIP31758_3988YPSIP31758_2842YPSIP31758_2844
YPSE273123 YPTB3772YPTB0056YPTB3771YPTB1184YPTB1182
YPES386656 YPDSF_0055YPDSF_3846YPDSF_0056YPDSF_2544YPDSF_2546
YPES377628 YPN_3937YPN_3791YPN_3936YPN_2848YPN_2850
YPES360102 YPA_3341YPA_3483YPA_3340YPA_1060YPA_1058
YPES349746 YPANGOLA_A3749YPANGOLA_A0065YPANGOLA_A3748YPANGOLA_A1427YPANGOLA_A1425
YPES214092 YPO0128YPO0059YPO0129YPO1153YPO1151
YPES187410 Y3906Y0081Y3908Y3029Y3031
YENT393305 YE3994YE0073YE3995YE2905YE2907
XORY360094 XOOORF_4931XOOORF_4369XOOORF_0233XOOORF_0231XOOORF_4930
XORY342109 XOO0418XOO3486XOO0215XOO0213XOO0419
XORY291331 XOO0454XOO3691XOO0235XOO0233XOO0455
XFAS405440 XFASM12_0049XFASM12_0710XFASM12_0709XFASM12_0926XFASM12_0050
XFAS183190 PD_0042PD_0598PD_0597PD_0778PD_0043
XFAS160492 XF0063XF1357XF1356XF2099XF0064
XCAM487884 XCC-B100_0417XCC-B100_3414XCC-B100_0413XCC-B100_0410XCC-B100_0416
XCAM316273 XCAORF_4123XCAORF_1132XCAORF_4127XCAORF_4131XCAORF_4124
XCAM314565 XC_0401XC_3296XC_0397XC_0395XC_0400
XCAM190485 XCC0389XCC0939XCC0385XCC0383XCC0388
XAXO190486 XAC0389XAC1016XAC0385XAC0383XAC0388
XAUT78245 XAUT_3090XAUT_4043XAUT_1142XAUT_1117
VVUL216895 VV1_0863VV2_1484VV1_0862VV1_2941VV1_2943
VVUL196600 VV0231VVA0304VV0230VV1329VV1327
VPAR223926 VP0147VPA1510VP0148VP1115VP1113
VFIS312309 VF0117VFA0418VF0118VFA0746
VCHO345073 VC0395_A2292VC0395_0352VC0395_A2290VC0395_A0632VC0395_A0630
VCHO VC2719VCA0886VC2718VC1114VC1112
TTUR377629 TERTU_0489TERTU_0491TERTU_0492TERTU_0492TERTU_0490
TERY203124 TERY_0911TERY_0352TERY_0351TERY_1067TERY_3533
TELO197221 TLR1336TLR1157TLR1953TLL0661
TDEN292415 TBD_0317TBD_0669TBD_0321TBD_0322TBD_0319
TCRU317025 TCR_1977TCR_1979TCR_1980TCR_1981TCR_1978
STYP99287 STM3510STM3709STM3509STM0796STM0794
STHE292459 STH120STH1872STH809STH2546
SSP94122 SHEWANA3_4009SHEWANA3_4104SHEWANA3_4010SHEWANA3_2517SHEWANA3_2519
SSP644076 SCH4B_3355SCH4B_2381SCH4B_4140SCH4B_1638
SSON300269 SSO_3544SSO_3787SSO_3545SSO_0756SSO_0754
SSED425104 SSED_0177SSED_0101SSED_0176SSED_2774SSED_2776
SRUB309807 SRU_1073SRU_0382SRU_2682SRU_0756
SPRO399741 SPRO_4633SPRO_4824SPRO_4632SPRO_1313SPRO_1311
SPEA398579 SPEA_4012SPEA_0107SPEA_4013SPEA_1803SPEA_1801
SONE211586 SO_4625SO_4674SO_4626SO_2738SO_2740
SMED366394 SMED_2510SMED_2225SMED_4206SMED_2003
SLOI323850 SHEW_3629SHEW_3709SHEW_3630SHEW_1721SHEW_1719
SLAC55218 SL1157_0829SL1157_0815SL1157_0811SL1157_A0116
SHIGELLA YHGHKBLBIOHBIOCBIOB
SHAL458817 SHAL_0245SHAL_4215SHAL_0244SHAL_2475SHAL_2477
SGLO343509 SG0904SG2324SG0905SG0903
SFUM335543 SFUM_3894SFUM_2235SFUM_3543SFUM_3502SFUM_1825
SFLE373384 SFV_3421SFV_3911SFV_3420SFV_0760SFV_0757
SFLE198214 AAN44897.1AAN45104.1AAN44896.1AAN42362.1AAN42360.1
SENT454169 SEHA_C3818SEHA_C4034SEHA_C3817SEHA_C0923SEHA_C0921
SENT321314 SCH_3442SCH_3632SCH_3441SCH_0794SCH_0792
SENT295319 SPA3375SPA3561SPA3374SPA1956SPA1958
SENT220341 STY4286STY4086STY4287STY0829STY0827
SENT209261 T3996T3810T3997T2091T2093
SELO269084 SYC1701_CSYC2292_CSYC2343_DSYC1098_D
SDYS300267 SDY_4050SDY_3663SDY_0829SDY_0831
SDEN318161 SDEN_3529SDEN_3615SDEN_3530SDEN_1660SDEN_1658
SDEG203122 SDE_3140SDE_3138SDE_3137SDE_3137SDE_3139
SCO SCO6800SCO0267SCO6510SCO1244
SBOY300268 SBO_3401SBO_3623SBO_3402SBO_0664SBO_0662
SBAL402882 SHEW185_4198SHEW185_4340SHEW185_4199SHEW185_1753SHEW185_1751
SBAL399599 SBAL195_4330SBAL195_4480SBAL195_4331SBAL195_1797SBAL195_1795
SAVE227882 SAV1627SAV1548SAV664SAV7093
RSOL267608 RSC0359RSP0961RSC0298RSC0360RSC0266
RPOM246200 SPO_0071SPO_3360SPO_A0277SPO_0145SPO_3338
RPAL316056 RPC_0520RPC_1325RPC_1330RPC_2136RPC_3236
RPAL316055 RPE_0152RPE_1359RPE_1653RPE_2208
RPAL258594 RPA0597RPA1554RPA1568RPA1615RPA2045
RMET266264 RMET_0258RMET_4805RMET_0084RMET_0259RMET_0117
REUT381666 H16_A0339H16_B0819H16_A2809H16_A0340H16_A0183
REUT264198 REUT_A0311REUT_B4803REUT_A0312REUT_A0150
PSYR223283 PSPTO_0493PSPTO_0495PSPTO_0496PSPTO_0497PSPTO_0494
PSYR205918 PSYR_4688PSYR_4686PSYR_4685PSYR_4684PSYR_4687
PSTU379731 PST_3867PST_3865PST_3864PST_3863PST_3866
PSP296591 BPRO_1242BPRO_4366BPRO_1857BPRO_3929BPRO_1580
PPUT76869 PPUTGB1_0391PPUTGB1_0393PPUTGB1_0394PPUTGB1_0395PPUTGB1_0392
PPUT351746 PPUT_0387PPUT_0389PPUT_0390PPUT_0391PPUT_0388
PPUT160488 PP_0361PP_0363PP_0364PP_0365PP_0362
PPRO298386 PBPRA0178PBPRA1729PBPRA0179PBPRA2327PBPRA2329
PNAP365044 PNAP_0875PNAP_4032PNAP_2121PNAP_4030
PMEN399739 PMEN_4090PMEN_4087PMEN_4086PMEN_4085PMEN_4088
PLUM243265 PLU0199PLU4846PLU0204PLU1487PLU1485
PING357804 PING_3201PING_1852PING_3200PING_1922PING_1924
PHAL326442 PSHAA2858PSHAA2316PSHAA2857PSHAA1607PSHAA1609
PGIN242619 PG_0158PG_0481PG_1619PG_2081
PFLU220664 PFL_5694PFL_5692PFL_5691PFL_5690PFL_5693
PFLU216595 PFLU5616PFLU5614PFLU5613PFLU5612PFLU5615
PFLU205922 PFL_5177PFL_5175PFL_5174PFL_5173PFL_5176
PENT384676 PSEEN5122PSEEN5120PSEEN5119PSEEN5118PSEEN5121
PDIS435591 BDI_3692BDI_1237BDI_1917BDI_1913
PCAR338963 PCAR_2573PCAR_1665PCAR_1664PCAR_1663
PATL342610 PATL_4231PATL_0061PATL_4230PATL_2555PATL_2557
PAER208964 PA0489PA0501PA0502PA0503PA0500
PAER208963 PA14_06360PA14_06510PA14_06530PA14_06540PA14_06500
OCAR504832 OCAR_4088OCAR_4706OCAR_4430OCAR_4676OCAR_4707
OANT439375 OANT_1028OANT_3595OANT_0127OANT_2823
NSP35761 NOCA_3756NOCA_1790NOCA_2043NOCA_3415
NOCE323261 NOC_2102NOC_2100NOC_2099NOC_2098NOC_2101
NMUL323848 NMUL_A1128NMUL_A1130NMUL_A1131NMUL_A1132NMUL_A1129
NEUT335283 NEUT_2139NEUT_2137NEUT_2136NEUT_2135NEUT_2138
NEUR228410 NE2301NE2299NE2298NE2297NE2300
MXAN246197 MXAN_1199MXAN_3748MXAN_0201MXAN_2243MXAN_1257
MSP409 M446_4814M446_0531M446_5272M446_5411
MSP400668 MMWYL1_3458MMWYL1_3792MMWYL1_3455MMWYL1_3454MMWYL1_3457
MSP266779 MESO_3006MESO_0443MESO_2526MESO_2088
MPET420662 MPE_A3184MPE_A0530MPE_A2442MPE_A1786
MMAR394221 MMAR10_2264MMAR10_1598MMAR10_0314MMAR10_0058
MLOT266835 MLL3453MLL9204MLR2794MLL3908MLL5831
MFLA265072 MFLA_2181MFLA_2163MFLA_2162MFLA_2161MFLA_2164
MEXT419610 MEXT_0307MEXT_3822MEXT_4752MEXT_4006
MCAP243233 MCA_1124MCA_1126MCA_1127MCA_1128MCA_1125
MAQU351348 MAQU_2757MAQU_2755MAQU_3452MAQU_2754MAQU_2756
MAER449447 MAE_51320MAE_40370MAE_20520MAE_00170
LSPH444177 BSPH_0909BSPH_4077BSPH_1760BSPH_3466
LPNE400673 LPC_1799LPC_2593LPC_0888LPC_1798LPC_0886
LPNE297246 LPP2280LPP0756LPP1430LPP2279LPP1428
LPNE297245 LPL2252LPL0738LPL1554LPL2251LPL1556
LPNE272624 LPG2332LPG0701LPG1474LPG2331LPG1472
KPNE272620 GKPORF_B3125GKPORF_B3323GKPORF_B3124GKPORF_B5228GKPORF_B5226
JSP375286 MMA_3155MMA_0121MMA_3154MMA_0123
ILOI283942 IL0247IL0270IL0246IL1322IL1324
HHAL349124 HHAL_0964HHAL_0962HHAL_0961HHAL_0960HHAL_0963
HCHE349521 HCH_05372HCH_01633HCH_05369HCH_05368HCH_05371
HAUR316274 HAUR_0165HAUR_2298HAUR_4368HAUR_3491
HARS204773 HEAR2921HEAR1669HEAR1670HEAR1671HEAR0102
GVIO251221 GLR3764GLL0397GLL1483GLR4328
GURA351605 GURA_4125GURA_3246GURA_3245GURA_3244GURA_2242
GTHE420246 GTNG_3071GTNG_0876GTNG_1429GTNG_1418
GSUL243231 GSU_0124GSU_2629GSU_2628GSU_2627GSU_1584
GOXY290633 GOX0042GOX1636GOX0722GOX2031
GMET269799 GMET_3333GMET_0842GMET_0843GMET_0844GMET_1582
GKAU235909 GK3146GK2128GK0989GK1582GK1570
GFOR411154 GFO_3532GFO_3375GFO_2320GFO_3566
ESP42895 ENT638_3826ENT638_0118ENT638_3825ENT638_1268ENT638_1266
ELIT314225 ELI_05880ELI_04785ELI_10100ELI_04920
EFER585054 EFER_3382EFER_3907EFER_3380EFER_2335EFER_2338
ECOO157 YHGHKBLBIOHBIOCBIOB
ECOL83334 ECS4254ECS4495ECS4255ECS0855ECS0853
ECOL585397 ECED1_4074ECED1_4303ECED1_4072ECED1_0741ECED1_0739
ECOL585057 ECIAI39_3894ECIAI39_4138ECIAI39_3892ECIAI39_0753ECIAI39_0751
ECOL585056 ECUMN_3872ECUMN_4134ECUMN_3871ECUMN_0919ECUMN_0917
ECOL585055 EC55989_3821EC55989_4084EC55989_3820EC55989_0820EC55989_0818
ECOL585035 ECS88_3801ECS88_4034ECS88_3799ECS88_0794ECS88_0792
ECOL585034 ECIAI1_3557ECIAI1_3790ECIAI1_3555ECIAI1_0812ECIAI1_0810
ECOL481805 ECOLC_0300ECOLC_0091ECOLC_0301ECOLC_2866ECOLC_2868
ECOL469008 ECBD_0332ECBD_0108ECBD_0333ECBD_2846ECBD_2848
ECOL439855 ECSMS35_3694ECSMS35_3954ECSMS35_3693ECSMS35_0800ECSMS35_0798
ECOL413997 ECB_03265ECB_03475ECB_03264ECB_00744ECB_00742
ECOL409438 ECSE_3680ECSE_3900ECSE_3679ECSE_0830ECSE_0828
ECOL405955 APECO1_3053APECO1_2838APECO1_3054APECO1_1312APECO1_1314
ECOL364106 UTI89_C3914UTI89_C4163UTI89_C3913UTI89_C0775UTI89_C0773
ECOL362663 ECP_3499ECP_3718ECP_3498ECP_0791ECP_0789
ECOL331111 ECE24377A_3888ECE24377A_4121ECE24377A_3887ECE24377A_0840ECE24377A_0838
ECOL316407 ECK3400:JW5691:B3413ECK3607:JW3592:B3617ECK3399:JW3375:B3412ECK0766:JW0760:B0777ECK0764:JW0758:B0775
ECOL199310 C4190C4444C4189C0857C0855
ECAR218491 ECA4133ECA0167ECA4132ECA2823ECA2825
DARO159087 DARO_0617DARO_2897DARO_2898DARO_2899DARO_0618
CVIO243365 CV_4382CV_1650CV_4377CV_4376CV_4381
CVES412965 COSY_0760COSY_0761COSY_0243COSY_0459
CTEP194439 CT_2006CT_1951CT_0049CT_0052
CSP78 CAUL_0939CAUL_5431CAUL_2393CAUL_1979CAUL_4625
CSP501479 CSE45_3386CSE45_2303CSE45_3747CSE45_2219
CSAL290398 CSAL_2296CSAL_1166CSAL_1165CSAL_1164CSAL_1167
CRUT413404 RMAG_0835RMAG_0836RMAG_0257RMAG_0499
CPSY167879 CPS_0218CPS_0120CPS_0217CPS_2596CPS_2594
CJAP155077 CJA_0425CJA_0427CJA_0428CJA_0428CJA_0426
CDES477974 DAUD_2082DAUD_1326DAUD_1458DAUD_1331
CBUR434922 COXBU7E912_1996COXBU7E912_1042COXBU7E912_1611COXBU7E912_1040
CBUR360115 COXBURSA331_A0572COXBURSA331_A0200COXBURSA331_A0935COXBURSA331_A0573COXBURSA331_A0933
CBUR227377 CBU_0111CBU_1005CBU_0467CBU_1007
CAULO CC0830CC1162CC2230CC3521
BWEI315730 BCERKBAB4_4986BCERKBAB4_0534BCERKBAB4_3011BCERKBAB4_3947BCERKBAB4_3946
BVIE269482 BCEP1808_2950BCEP1808_3788BCEP1808_4725BCEP1808_2949BCEP1808_3029
BTHU412694 BALH_4687BALH_0558BALH_2964BALH_3731BALH_3730
BTHU281309 BT9727_4871BT9727_0530BT9727_3084BT9727_3857BT9727_3856
BTHA271848 BTH_I0423BTH_II0005BTH_II1664BTH_I2377BTH_I0337
BSUI470137 BSUIS_A1719BSUIS_A0348BSUIS_A0119BSUIS_B0492
BSUI204722 BR_1878BR_0319BR_0114BR_A0492
BSUB BSU35450BSU17000BSU10900BSU30200
BSP376 BRADO0583BRADO6672BRADO2319BRADO1858BRADO2424
BSP36773 BCEP18194_A6179BCEP18194_B3179BCEP18194_B0726BCEP18194_A6278
BPSE320373 BURPS668_0486BURPS668_A0005BURPS668_3033BURPS668_0388
BPSE320372 BURPS1710B_A0711BURPS1710B_B1775BURPS1710B_A3376BURPS1710B_A0608
BPSE272560 BPSL0450BPSS0005BPSL2640BPSL0364
BOVI236 GBOORF1876GBOORF0347GBOORF0118GBOORFA0479
BMEL359391 BAB1_1880BAB1_0349BAB1_0111BAB2_0744
BMEL224914 BMEI0183BMEI1604BMEI1834BMEII0775
BMAL320389 BMA10247_2846BMA10247_A0006BMA10247_2034BMA10247_2269
BMAL320388 BMASAVP1_A0173BMASAVP1_1151BMASAVP1_A0747BMASAVP1_A3077
BMAL243160 BMA_3200BMA_A0005BMA_2164BMA_0103
BJAP224911 BLR0209BLL1200BLR3878BLR0060BLR2095
BHAL272558 BH3625BH3907BH3909BH1748
BCER572264 BCA_5322BCA_0654BCA_3378BCA_4228BCA_4227
BCER405917 BCE_5299BCE_0688BCE_3307BCE_4185BCE_4184
BCER315749 BCER98_3729BCER98_0533BCER98_2104BCER98_2814BCER98_2813
BCER288681 BCE33L4886BCE33L0530BCE33L2995BCE33L3871BCE33L3870
BCER226900 BC_5192BC_0621BC_3312BC_4115BC_4114
BCEN331272 BCEN2424_2850BCEN2424_5701BCEN2424_6365BCEN2424_4343BCEN2424_2934
BCEN331271 BCEN_2236BCEN_5158BCEN_1463BCEN_4023BCEN_2320
BCAN483179 BCAN_A1922BCAN_A0328BCAN_A0117BCAN_B0494
BANT592021 BAA_5454BAA_0702BAA_3912BAA_4359BAA_4358
BANT568206 BAMEG_5476BAMEG_3967BAMEG_0744BAMEG_4377BAMEG_4376
BANT261594 GBAA5425GBAA0620GBAA3887GBAA4337GBAA4336
BANT260799 BAS5041BAS0586BAS3601BAS4024BAS4023
BAMB398577 BAMMC406_2767BAMMC406_3115BAMMC406_5598BAMMC406_4895BAMMC406_2846
BAMB339670 BAMB_2905BAMB_4972BAMB_4321BAMB_5124BAMB_2983
BABO262698 BRUAB1_1856BRUAB1_0345BRUAB1_0111BRUAB2_0730
ASP76114 EBA1065EBA6018EBA6017EBA6013EBA1066
ASP62928 AZO2816AZO1889AZO1890AZO1891AZO2817
ASP1667 ARTH_1311ARTH_0912ARTH_1957ARTH_0875
ASAL382245 ASA_4099ASA_0091ASA_4098ASA_2875ASA_2877
AMAR329726 AM1_2345AM1_0726AM1_3250AM1_1733
AHYD196024 AHA_0298AHA_4234AHA_0299AHA_1491AHA_1489
AFER243159 AFE_2786AFE_2785AFE_2784AFE_2783AFE_2769
AEHR187272 MLG_2437MLG_2435MLG_2434MLG_2433MLG_2436
ADEH290397 ADEH_0236ADEH_2094ADEH_3732ADEH_3733ADEH_3453
ABOR393595 ABO_2221ABO_2219ABO_2218ABO_2217ABO_2220
ABAU360910 BAV0236BAV2449BAV0593BAV2451BAV0831
AAVE397945 AAVE_3909AAVE_3843AAVE_3182AAVE_2207AAVE_2518


Organism features enriched in list (features available for 205 out of the 221 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00007901792
Disease:Brucellosis 0.005206655
Disease:Bubonic_plague 0.001801666
Disease:Dysentery 0.001801666
Disease:Gastroenteritis 0.00028941113
Endospores:No 8.527e-1336211
GC_Content_Range4:0-40 8.973e-2422213
GC_Content_Range4:40-60 2.031e-9112224
GC_Content_Range4:60-100 0.000030971145
GC_Content_Range7:30-40 1.598e-1322166
GC_Content_Range7:50-60 4.992e-1269107
GC_Content_Range7:60-70 0.000010268134
Genome_Size_Range5:0-2 3.438e-322155
Genome_Size_Range5:2-4 0.000126350197
Genome_Size_Range5:4-6 1.954e-25121184
Genome_Size_Range5:6-10 1.331e-63247
Genome_Size_Range9:0-1 0.0000930127
Genome_Size_Range9:1-2 7.456e-271128
Genome_Size_Range9:2-3 4.146e-720120
Genome_Size_Range9:4-5 2.023e-65496
Genome_Size_Range9:5-6 1.262e-176788
Genome_Size_Range9:6-8 0.00001302638
Gram_Stain:Gram_Neg 2.677e-17164333
Gram_Stain:Gram_Pos 2.736e-1121150
Habitat:Host-associated 0.000130053206
Habitat:Multiple 0.001176978178
Motility:No 1.485e-1318151
Motility:Yes 1.142e-16141267
Optimal_temp.:- 0.0001996110257
Optimal_temp.:25-30 0.00221951319
Optimal_temp.:37 0.003382426106
Oxygen_Req:Anaerobic 1.618e-1010102
Oxygen_Req:Facultative 1.989e-696201
Pathogenic_in:Animal 0.00645563266
Pathogenic_in:Plant 0.00220171115
Shape:Coccus 3.699e-10682
Shape:Rod 2.984e-19171347
Shape:Spiral 0.0000454234
Temp._range:Mesophilic 0.0051484177473
Temp._range:Thermophilic 0.0093600635



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 231
Effective number of orgs (counting one per cluster within 468 clusters): 182

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TSP28240 Thermotoga sp.0
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX0
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis0
SARE391037 ncbi Salinispora arenicola CNS-2051
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT31
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP387092 ncbi Nitratiruptor sp. SB155-21
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP290400 ncbi Jannaschia sp. CCS11
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FMAG334413 ncbi Finegoldia magna ATCC 293281
EFAE226185 ncbi Enterococcus faecalis V5830
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DNOD246195 ncbi Dichelobacter nodosus VCS1703A1
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/31
BTUR314724 ncbi Borrelia turicatae 91E1351
BTRI382640 ncbi Bartonella tribocorum CIP 1054761
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BQUI283165 ncbi Bartonella quintana Toulouse1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-11
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K161
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5831
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
ACEL351607 ncbi Acidothermus cellulolyticus 11B1


Names of the homologs of the genes in the group in each of these orgs
  G7747   EG10512   EG10122   EG10119   EG10118   
WSUC273121 WS1500
WPIP955
WPIP80849
VEIS391735 VEIS_2228
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX2240
TWHI218496
TWHI203267
TVOL273116 TVN0398
TSP28240
TPET390874 TPET_0559
TPEN368408
TPAL243276
TMAR243274
TKOD69014 TK2217
TFUS269800
TDEN326298
TDEN243275 TDE_2194
TACI273075 TA1189
SWOL335541 SWOL_0188
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP387093 SUN_0087
SSP321332 CYB_0916
SSP1148 SLR1364
SSP1131 SYNCC9605_1632
SSOL273057 SSO2262
SSAP342451 SSP2205
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SGOR29390
SARE391037 SARE_1518
SAGA211110 GBS0511
SAGA208435 SAG_0464
SAGA205921 SAK_0566
SACI330779 SACI_2213
RTYP257363
RSPH349102 RSPH17025_1900
RRIC452659
RRIC392021
RPRO272947
RMAS416276 RMA_0882
RFEL315456 RF_0527
RCON272944 RC0843
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PTHE370438 PTH_0521
PPEN278197 PEPE_0426
PMOB403833 PMOB_1549
PMAR74547 PMT1056
PMAR74546 PMT9312_1104
PMAR59920 PMN2A_0655
PMAR167555 NATL1_14871
PMAR167542 P9515ORF_1238
PMAR167540 PMM1093
PISL384616
PHOR70601 PH0292
PFUR186497 PF0265
PAST100379
PARS340102
PARC259536 PSYC_1861
PAER178306
PABY272844 PAB1244
OTSU357244 OTBS_0857
NSP387092 NIS_1653
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748 MMOB5780
MMAZ192952 MM0529
MMAR444158
MMAR426368
MMAR402880
MMAR267377
MLEP272631 ML1220
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0834
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797 MBAR_A0124
MART243272
MAEO419665
LXYL281090 LXX05380
LWEL386043 LWE1692
LSAK314315 LSA0509
LREU557436
LPLA220668
LMON265669 LMOF2365_1698
LMON169963 LMO1674
LMES203120 LEUM_0248
LLAC272623
LLAC272622
LJOH257314
LINT267671 LIC_11777
LINT189518 LA2143
LINN272626 LIN1782
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LBOR355277 LBJ_1870
LBOR355276 LBL_1414
LBIF456481 LEPBI_I0828
LBIF355278 LBF_0798
LACI272621
JSP290400 JANN_3724
IHOS453591
HWAL362976
HSP64091 VNG2147G
HSAL478009 OE3994F
HPYL85963
HPYL357544
HPY
HMOD498761 HM1_1678
HHEP235279
HBUT415426
HACI382638
FMAG334413 FMG_1498
EFAE226185
DSP255470 CBDBA1424
DSP216389 DEHABAV1_1259
DNOD246195 DNO_0464
DETH243164 DET_1458
CTRA471473
CTRA471472
CTET212717 CTC_00151
CSUL444179
CPNE182082 CPB1084
CPNE138677 CPJ1044
CPNE115713 CPN1044
CPNE115711 CP_0808
CPHY357809 CPHY_0248
CPER289380
CPER195103 CPF_1795
CPER195102 CPE1544
CPEL335992
CNOV386415 NT01CX_1470
CMUR243161
CMIC443906 CMM_2872
CMIC31964 CMS2177
CMET456442 MBOO_1663
CMAQ397948
CKOR374847 KCR_0632
CKLU431943 CKL_1696
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK0682
CHOM360107 CHAB381_0711
CGLU196627 CG0095
CFET360106
CFEL264202 CF0298
CEFF196164 CE0089
CDIP257309 DIP0105
CCUR360105
CCON360104
CCAV227941
CBOT536232 CLM_2468
CBOT515621 CLJ_B2472
CBOT498213 CLD_2316
CBOT441772 CLI_2309
CBOT441771 CLC_2183
CBOT441770 CLB_2200
CBOT36826 CBO2259
CBLO291272
CBLO203907
CABO218497 CAB685
BTUR314724 BT0798
BTRI382640 BT_0610
BSP107806 BU291
BQUI283165 BQ03030
BLON206672
BHER314723
BHEN283166 BH04000
BGAR290434
BCLA66692 ABC2970
BBUR224326
BBAC360095 BARBAKC583_0367
BBAC264462 BD3625
BAPH372461 BCC_356
BAPH198804 BUSG280
BAFZ390236
AYEL322098
AURANTIMONAS
APER272557
ANAE240017
ALAI441768
ACEL351607 ACEL_1035


Organism features enriched in list (features available for 218 out of the 231 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 9.605e-95992
Disease:Botulism 0.007101555
Disease:Pharyngitis 0.000352288
Disease:Wide_range_of_infections 0.00001701111
Disease:bronchitis_and_pneumonitis 0.000352288
Endospores:No 1.467e-14122211
GC_Content_Range4:0-40 2.919e-25138213
GC_Content_Range4:40-60 0.000287265224
GC_Content_Range4:60-100 1.014e-1615145
GC_Content_Range7:0-30 2.702e-113947
GC_Content_Range7:30-40 2.824e-1299166
GC_Content_Range7:50-60 8.106e-719107
GC_Content_Range7:60-70 5.043e-1613134
Genome_Size_Range5:0-2 2.732e-42128155
Genome_Size_Range5:4-6 2.450e-2615184
Genome_Size_Range9:0-1 1.262e-92527
Genome_Size_Range9:1-2 7.044e-30103128
Genome_Size_Range9:4-5 1.655e-81396
Genome_Size_Range9:5-6 3.217e-17288
Gram_Stain:Gram_Neg 4.897e-1285333
Gram_Stain:Gram_Pos 0.000185974150
Habitat:Host-associated 0.002018792206
Habitat:Specialized 0.00655412853
Habitat:Terrestrial 0.0003645331
Motility:No 0.000061476151
Motility:Yes 0.000058078267
Optimal_temp.:- 0.005367883257
Optimal_temp.:37 0.000143556106
Oxygen_Req:Aerobic 6.515e-646185
Oxygen_Req:Anaerobic 7.193e-760102
Oxygen_Req:Microaerophilic 0.00767731218
Pathogenic_in:Animal 0.00318741566
Pathogenic_in:Swine 0.007101555
Shape:Coccus 0.00109484382
Shape:Irregular_coccus 0.00001611517
Shape:Rod 6.258e-1487347
Shape:Sphere 0.00002641619
Shape:Spiral 4.037e-92934
Temp._range:Hyperthermophilic 0.00004851823



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951560.6282
PWY-5918 (heme biosynthesis I)2721830.5852
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861830.5490
GLYCOCAT-PWY (glycogen degradation I)2461670.5473
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251570.5391
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491200.5281
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652070.5280
AST-PWY (arginine degradation II (AST pathway))1201040.5226
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001830.5142
PWY-5340 (sulfate activation for sulfonation)3852100.5070
PWY-4041 (γ-glutamyl cycle)2791740.5062
PWY-1269 (CMP-KDO biosynthesis I)3251890.4951
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181470.4901
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481950.4834
TYRFUMCAT-PWY (tyrosine degradation I)1841310.4834
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391920.4833
PWY-561 (superpathway of glyoxylate cycle)1621190.4706
PWY-5148 (acyl-CoA hydrolysis)2271480.4704
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491570.4703
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491570.4703
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111800.4675
GLUTAMINDEG-PWY (glutamine degradation I)1911320.4675
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891720.4674
GLYOXYLATE-BYPASS (glyoxylate cycle)1691210.4607
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001750.4605
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761240.4588
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911710.4557
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222130.4543
GLUCARDEG-PWY (D-glucarate degradation I)1521120.4537
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961720.4501
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96820.4455
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901690.4448
PWY-6196 (serine racemization)102850.4426
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561120.4388
GLUCONSUPER-PWY (D-gluconate degradation)2291440.4368
PWY-5188 (tetrapyrrole biosynthesis I)4392140.4285
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831230.4278
PWY-6134 (tyrosine biosynthesis IV)89760.4260
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982020.4248
PWY-5913 (TCA cycle variation IV)3011700.4245
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162070.4233
PWY-5386 (methylglyoxal degradation I)3051710.4215
VALDEG-PWY (valine degradation I)2901650.4179
PWY-5028 (histidine degradation II)130960.4119
GALACTARDEG-PWY (D-galactarate degradation I)1511060.4105
PWY0-501 (lipoate biosynthesis and incorporation I)3851960.4103
GALACTITOLCAT-PWY (galactitol degradation)73650.4079
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261760.4054
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291770.4052
PWY0-1313 (acetate conversion to acetyl-CoA)3851950.4034
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911230.4020
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911230.4020



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10512   EG10122   EG10119   EG10118   
G77470.998630.999520.998720.998698
EG105120.9992320.9989910.998768
EG101220.9991660.998575
EG101190.999602
EG10118



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PAIRWISE BLAST SCORES:

  G7747   EG10512   EG10122   EG10119   EG10118   
G77470.0f0----
EG10512-0.0f0---
EG10122--0.0f0--
EG10119---0.0f0-
EG10118----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I) (degree of match pw to cand: 0.250, degree of match cand to pw: 0.600, average score: 0.729)
  Genes in pathway or complex:
             0.9994 0.9984 EG10121 (bioF) 7KAPSYN-MONOMER (8-amino-7-oxononanoate synthase monomer)
             0.2869 0.0023 EG10277 (fabH) FABH-MONOMER (FabH)
   *in cand* 0.9993 0.9987 EG10119 (bioC) EG10119-MONOMER (BioC methyltransferase)
             0.3028 0.0013 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
             0.4662 0.3132 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.1797 0.0851 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.3556 0.2663 EG10274 (fabB) FABB-MONOMER (FabB)
   *in cand* 0.9993 0.9986 EG10122 (bioH) EG10122-MONOMER (carboxylesterase)
             0.9088 0.6984 EG10117 (bioA) DAPASYN-MONOMER (adenosylmethionine-8-amino-7-oxononanoate aminotransferase monomer)
   *in cand* 0.9991 0.9986 EG10118 (bioB) BIOTIN-SYN-MONOMER (biotin synthase monomer)
             0.9988 0.9969 EG10120 (bioD) DETHIOBIOTIN-SYN-MONOMER (dethiobiotin synthetase monomer)
             0.3361 0.0015 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9986 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
   *in cand* 0.9991 0.9986 G7747 (gntX) G7747-MONOMER (protein involved in utilization of DNA as a carbon source)

- PWY-6519 (7-keto-8-aminopelargonate biosynthesis I) (degree of match pw to cand: 0.222, degree of match cand to pw: 0.400, average score: 0.695)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9986 EG10122 (bioH) EG10122-MONOMER (carboxylesterase)
             0.3556 0.2663 EG10274 (fabB) FABB-MONOMER (FabB)
             0.1797 0.0851 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.4662 0.3132 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.3028 0.0013 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
   *in cand* 0.9993 0.9987 EG10119 (bioC) EG10119-MONOMER (BioC methyltransferase)
             0.2869 0.0023 EG10277 (fabH) FABH-MONOMER (FabH)
             0.9994 0.9984 EG10121 (bioF) 7KAPSYN-MONOMER (8-amino-7-oxononanoate synthase monomer)
             0.3361 0.0015 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9986 EG10118 (bioB) BIOTIN-SYN-MONOMER (biotin synthase monomer)
   *in cand* 0.9991 0.9986 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
   *in cand* 0.9991 0.9986 G7747 (gntX) G7747-MONOMER (protein involved in utilization of DNA as a carbon source)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10122 G7747 (centered at G7747)
EG10118 (centered at EG10118)
EG10119 (centered at EG10119)
EG10512 (centered at EG10512)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7747   EG10512   EG10122   EG10119   EG10118   
325/623311/623262/623275/623405/623
AAEO224324:0:Tyes10080--241
AAUR290340:2:Tyes-3652036-0
AAVE397945:0:Tyes166716039600306
ABAC204669:0:Tyes30362748-0-
ABAU360910:0:Tyes022223562224590
ABOR393595:0:Tyes42103
ABUT367737:0:Tyes---900
ACAU438753:0:Tyes3987-1568-0
ACEL351607:0:Tyes----0
ACRY349163:8:Tyes0382--383
ADEH290397:0:Tyes01875353235333248
AEHR187272:0:Tyes42103
AFER243159:0:Tyes171615140
AFUL224325:0:Tyes--18020-
AHYD196024:0:Tyes03797111681166
AMAR234826:0:Tyes269--2390
AMAR329726:9:Tyes160202499-995
AMET293826:0:Tyes02845--2467
AORE350688:0:Tyes16880---
APHA212042:0:Tyes1017---0
APLE416269:0:Tyes1928--8260
APLE434271:0:Tno1954--8020
ASAL382245:5:Tyes38690386826852687
ASP1667:3:Tyes-4373610850
ASP232721:2:Tyes1450---0
ASP62928:0:Tyes936012937
ASP62977:0:Tyes2215-0-1129
ASP76114:2:Tyes02922292129201
AVAR240292:3:Tyes0---3421
BABO262698:0:Tno----0
BABO262698:1:Tno1679222-0-
BAMB339670:2:Tno-6480800-
BAMB339670:3:Tno0---78
BAMB398577:1:Tno--0--
BAMB398577:2:Tno-0-1757-
BAMB398577:3:Tno0---78
BAMY326423:0:Tyes-0--141
BANT260799:0:Tno44680301434333432
BANT261594:2:Tno44310297334083407
BANT568206:2:Tyes46103169035533552
BANT592021:2:Tno46500315835953594
BAPH198804:0:Tyes----0
BAPH372461:0:Tyes--0--
BBAC264462:0:Tyes---0-
BBAC360095:0:Tyes0----
BBRO257310:0:Tyes---20180
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BCEN331272:1:Tyes--0--
BCEN331272:2:Tyes-1357-0-
BCEN331272:3:Tyes0---82
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BOVI236:1:Tyes1513196-0-
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BPER257313:0:Tyes---0525
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BPSE320372:0:Tno-0---
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BPUM315750:0:Tyes-0--1178
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BSP36773:2:Tyes0---99
BSP376:0:Tyes05785163512121735
BSUB:0:Tyes25896520-2021
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BSUI470137:1:Tno1550221-0-
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BVIE269482:6:Tyes-0911--
BVIE269482:7:Tyes1--080
BWEI315730:4:Tyes43860241933393338
BXEN266265:1:Tyes-0321--
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CACE272562:1:Tyes2660---0
CAULO:0:Tyes03391424-2731
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CCHL340177:0:Tyes0261530--
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CDIF272563:1:Tyes0---164
CDIP257309:0:Tyes----0
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CFEL264202:1:Tyes----0
CGLU196627:0:Tyes----0
CHOM360107:1:Tyes----0
CHUT269798:0:Tyes2995-0-1986
CHYD246194:0:Tyes0---716
CJAP155077:0:Tyes02331
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CKLU431943:1:Tyes----0
CKOR374847:0:Tyes-0---
CMET456442:0:Tyes---0-
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CMIC443906:2:Tyes--0--
CNOV386415:0:Tyes----0
CPER195102:1:Tyes----0
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CPHY357809:0:Tyes0----
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CPNE138677:0:Tno----0
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CSP501479:7:Fyes0--359-
CSP501479:8:Fyes-82--0
CSP78:0:Tyes-0---
CSP78:2:Tyes0-146210463722
CTEP194439:0:Tyes19301876-03
CTET212717:0:Tyes----0
CVES412965:0:Tyes-4944950205
CVIO243365:0:Tyes28040279927982803
DARO159087:0:Tyes02298229923001
DDES207559:0:Tyes0---1905
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DGEO319795:1:Tyes-0---
DHAF138119:0:Tyes1056-0539-
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DOLE96561:0:Tyes1231-1093-0
DPSY177439:2:Tyes0---2340
DRAD243230:3:Tyes9611896-0-
DRED349161:0:Tyes2668---0
DSHI398580:5:Tyes23400-2209-
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DVUL882:1:Tyes210---0
ECAN269484:0:Tyes83--0656
ECAR218491:0:Tyes40280402726792681
ECHA205920:0:Tyes103--0304
ECOL199310:0:Tno32693521326820
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ECOL331111:6:Tno29353164293420
ECOL362663:0:Tno27082924270720
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ECOL481805:0:Tno204020527772779
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ECOL585035:0:Tno29013127290020
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ECOL585056:2:Tno29573211295620
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EFER585054:1:Tyes10561562105503
ELIT314225:0:Tyes2260-107727
ERUM254945:0:Tyes0---620
ERUM302409:0:Tno0---615
ESP42895:1:Tyes37460374511741172
FALN326424:0:Tyes--9640947
FJOH376686:0:Tyes980--102
FMAG334413:1:Tyes0----
FNOD381764:0:Tyes-8060--
FNUC190304:0:Tyes368---0
FPHI484022:1:Tyes1800--1638
FRANT:0:Tno-0--211
FSP106370:0:Tyes--0-160
FSP1855:0:Tyes--0-15
FSUC59374:0:Tyes-0--816
FTUL351581:0:Tno0982--757
FTUL393011:0:Tno0881--702
FTUL393115:0:Tyes-0--209
FTUL401614:0:Tyes0168--355
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GBET391165:0:Tyes97--940
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GOXY290633:5:Tyes01580-6751975
GSUL243231:0:Tyes02492249124901450
GTHE420246:1:Tyes2162-0545534
GURA351605:0:Tyes18659939929910
GVIO251221:0:Tyes34120-11023977
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HAUR316274:2:Tyes0215042383349-
HCHE349521:0:Tyes35960359335923595
HDUC233412:0:Tyes0--1287715
HHAL349124:0:Tyes42103
HINF281310:0:Tyes0---582
HINF374930:0:Tyes0---1056
HINF71421:0:Tno0---582
HMAR272569:8:Tyes-0-2034-
HMOD498761:0:Tyes----0
HMUK485914:1:Tyes-1032-01034
HNEP81032:0:Tyes3071---0
HSAL478009:4:Tyes---0-
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JSP375286:0:Tyes30790-30782
KPNE272620:2:Tyes1198020392037
KRAD266940:2:Fyes0-1394--
LBIF355278:2:Tyes----0
LBIF456481:2:Tno----0
LBOR355276:1:Tyes----0
LBOR355277:1:Tno----0
LCHO395495:0:Tyes1740--2
LINN272626:1:Tno--0--
LINT189518:1:Tyes----0
LINT267671:1:Tno----0
LINT363253:3:Tyes689--30
LMES203120:1:Tyes0----
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LPNE297246:1:Fyes152306661522664
LPNE400673:0:Tno890167028890
LSAK314315:0:Tyes-0---
LSPH444177:1:Tyes-030238312433
LWEL386043:0:Tyes--0--
LXYL281090:0:Tyes0----
MABS561007:1:Tyes--26413400
MACE188937:0:Tyes--0700-
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MAQU351348:2:Tyes3169402
MAVI243243:0:Tyes---02314
MBAR269797:1:Tyes---0-
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MBOV410289:0:Tno-0-601573
MCAP243233:0:Tyes02341
MEXT419610:0:Tyes0-352044553705
MFLA265072:0:Tyes202103
MGIL350054:3:Tyes--021441074
MHUN323259:0:Tyes---0-
MLEP272631:0:Tyes----0
MLOT266835:1:Tyes-0---
MLOT266835:2:Tyes518-08832404
MMAG342108:0:Tyes-0-10781074
MMAR368407:0:Tyes--0349-
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MPET420662:1:Tyes264701906-1253
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MTHE264732:0:Tyes0--930-
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MVAN350058:0:Tyes--10518170
MXAN246197:0:Tyes9683417019691024
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NMEN374833:0:Tno797-796-0
NMUL323848:3:Tyes02341
NOCE323261:1:Tyes42103
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NSEN222891:0:Tyes0---190
NSP103690:6:Tyes1022---0
NSP35761:1:Tyes-197602581633
NSP387092:0:Tyes----0
NWIN323098:0:Tyes144---0
OANT439375:4:Tyes--769-0
OANT439375:5:Tyes909--0-
OCAR504832:0:Tyes0618342588619
OIHE221109:0:Tyes12761814-0-
OTSU357244:0:Fyes0----
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PAER208963:0:Tyes0910118
PAER208964:0:Tno012131411
PARC259536:0:Tyes----0
PATL342610:0:Tyes42040420325112513
PCAR338963:0:Tyes918210-
PCRY335284:1:Tyes0-1999-1882
PDIS435591:0:Tyes24440-673669
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PFLU220664:0:Tyes42103
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PHOR70601:0:Tyes-0---
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PMAR167539:0:Tyes--149-0
PMAR167540:0:Tyes----0
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PMAR167546:0:Tyes---4620
PMAR167555:0:Tyes----0
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PMAR74547:0:Tyes----0
PMAR93060:0:Tyes---5170
PMEN399739:0:Tyes52103
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PNAP365044:8:Tyes031771262-3175
PPEN278197:0:Tyes0----
PPRO298386:2:Tyes01551121442146
PPUT160488:0:Tno02341
PPUT351746:0:Tyes02341
PPUT76869:0:Tno02341
PRUM264731:0:Tyes18810---
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PSP296591:2:Tyes031006072663331
PSP312153:0:Tyes-0--2
PSP56811:2:Tyes1979-0-2156
PSTU379731:0:Tyes42103
PSYR205918:0:Tyes42103
PSYR223283:2:Tyes02341
PTHE370438:0:Tyes----0
RALB246199:0:Tyes0--359190
RCAS383372:0:Tyes0-831--
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RDEN375451:4:Tyes-01583--
RETL347834:4:Tyes--0--
RETL347834:5:Tyes8020---
REUT264198:2:Tyes-0---
REUT264198:3:Tyes162--1630
REUT381666:1:Tyes-0---
REUT381666:2:Tyes155-25521560
RFEL315456:2:Tyes----0
RFER338969:1:Tyes0---614
RLEG216596:6:Tyes8940-1-
RMAS416276:1:Tyes0----
RMET266264:1:Tyes-0---
RMET266264:2:Tyes174-017533
RPAL258594:0:Tyes095897210191451
RPAL316055:0:Tyes011981489-2037
RPAL316056:0:Tyes080080516102714
RPAL316057:0:Tyes03656--2022
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RPOM246200:1:Tyes03213-723191
RRUB269796:1:Tyes1407-0-
RSAL288705:0:Tyes-742--0
RSOL267608:0:Tyes-0---
RSOL267608:1:Tyes93-32940
RSP101510:3:Fyes--474156650
RSP357808:0:Tyes1628-03719-
RSPH272943:4:Tyes2339469--0
RSPH349101:2:Tno2299463--0
RSPH349102:5:Tyes-0---
RXYL266117:0:Tyes0-766--
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SACI56780:0:Tyes1460--2002
SAGA205921:0:Tno----0
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SAGA211110:0:Tyes----0
SALA317655:1:Tyes-19950-1025
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SAUR158878:1:Tno-0--1930
SAUR158879:1:Tno-0--1833
SAUR196620:0:Tno-0--1901
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SAVE227882:1:Fyes-96788606516
SBAL399599:3:Tyes26092758261020
SBAL402882:1:Tno25092649251020
SBOY300268:1:Tyes25912806259020
SCO:2:Fyes-657206282967
SDEG203122:0:Tyes31002
SDEN318161:0:Tyes19152001191620
SDYS300267:1:Tyes-3013266002
SELO269084:0:Tyes623-122412750
SENT209261:0:Tno18251650182602
SENT220341:0:Tno31302953313120
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SEPI176279:1:Tyes--0-2029
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SFLE198214:0:Tyes25972805259620
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SSAP342451:2:Tyes-0---
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SSP292414:2:Tyes-0-4-
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SSP321332:0:Tyes0----
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SSP644076:5:Fyes---0-
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SSP64471:0:Tyes--0-130
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TTUR377629:0:Tyes02331
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VFIS312309:1:Tyes-0-328-
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VPAR223926:0:Tyes-0---
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WSUC273121:0:Tyes----0
XAUT78245:1:Tyes1971-2932250
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YPES187410:5:Tno38660387029752977
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YPES360102:3:Tyes23112455231020
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YPSE273123:2:Tno37600375911751173
YPSE349747:2:Tno38710387027372739
ZMOB264203:0:Tyes10971206--0



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