CANDIDATE ID: 725

CANDIDATE ID: 725

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9928420e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    8.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10512 (kbl) (b3617)
   Products of gene:
     - AKBLIG-MONOMER (Kbl)
     - AKBLIG-CPLX (2-amino-3-ketobutyrate CoA ligase)
       Reactions:
        glycine + acetyl-CoA  =  2-amino-3-oxobutanoate + coenzyme A + H+
         In pathways
         THREOCAT-PWY (superpathway of threonine metabolism)
         THREONINE-DEG2-PWY (threonine degradation II)

- EG10122 (bioH) (bioH)
   Products of gene:
     - EG10122-MONOMER (carboxylesterase)
       Reactions:
        a pimeloyl-[acp] methyl ester + H2O  ->  a pimeloyl-[acp] + methanol
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        a carboxylic ester + H2O  =  an alcohol + a carboxylate

- EG10121 (bioF) (bioF)
   Products of gene:
     - 7KAPSYN-MONOMER (8-amino-7-oxononanoate synthase monomer)
     - 7KAPSYN-CPLX (8-amino-7-oxononanoate synthase)
       Reactions:
        a pimeloyl-[acp] + L-alanine + H+  ->  7-keto-8-aminopelargonate + CO2 + a holo-[acp]
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        L-alanine + pimeloyl-CoA + H+  ->  CO2 + 7-keto-8-aminopelargonate + coenzyme A
         In pathways
         PWY-5005 (PWY-5005)
         PWY-6578 (PWY-6578)

- EG10119 (bioC) (bioC)
   Products of gene:
     - EG10119-MONOMER (BioC methyltransferase)
       Reactions:
        malonyl-CoA + S-adenosyl-L-methionine  ->  malonyl-CoA methyl ester + S-adenosyl-L-homocysteine
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)

- EG10118 (bioB) (bioB)
   Products of gene:
     - BIOTIN-SYN-MONOMER (biotin synthase monomer)
     - BIOTIN-SYN-CPLX (biotin synthase)
       Reactions:
        a sulfurated sulfur donor + dethiobiotin + 2 S-adenosyl-L-methionine  ->  an unsulfurated sulfur acceptor + biotin + 2 5'-deoxyadenosine + 2 L-methionine
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY0-1507 (biotin biosynthesis from 7-keto-8-aminopelargonate)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 227
Effective number of orgs (counting one per cluster within 468 clusters): 157

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1144
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TERY203124 ncbi Trichodesmium erythraeum IMS1014
TELO197221 ncbi Thermosynechococcus elongatus BP-14
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B4
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SRUB309807 ncbi Salinibacter ruber DSM 138554
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SCO ncbi Streptomyces coelicolor A3(2)5
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46805
SALA317655 ncbi Sphingopyxis alaskensis RB22564
RSP101510 ncbi Rhodococcus jostii RHA14
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1344
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PGIN242619 ncbi Porphyromonas gingivalis W834
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PDIS435591 ncbi Parabacteroides distasonis ATCC 85034
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NSP35761 Nocardioides sp.4
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NFAR247156 ncbi Nocardia farcinica IFM 101524
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
MXAN246197 ncbi Myxococcus xanthus DK 16225
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
MABS561007 ncbi Mycobacterium abscessus ATCC 199774
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HMUK485914 ncbi Halomicrobium mukohataei DSM 122864
HHAL349124 ncbi Halorhodospira halophila SL15
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
HARS204773 ncbi Herminiimonas arsenicoxydans5
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
GURA351605 ncbi Geobacter uraniireducens Rf45
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA5
CTEP194439 ncbi Chlorobium tepidum TLS4
CSP78 Caulobacter sp.5
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)5
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CJAP155077 Cellvibrio japonicus5
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
CAULO ncbi Caulobacter crescentus CB154
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1684
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHAL272558 ncbi Bacillus halodurans C-1254
BCIC186490 Candidatus Baumannia cicadellinicola4
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233654
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62928 ncbi Azoarcus sp. BH725
ASP1667 Arthrobacter sp.4
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAUR290340 ncbi Arthrobacter aurescens TC14


Names of the homologs of the genes in the group in each of these orgs
  EG10512   EG10122   EG10121   EG10119   EG10118   
YPSE349747 YPSIP31758_0071YPSIP31758_3988YPSIP31758_2843YPSIP31758_2842YPSIP31758_2844
YPSE273123 YPTB0056YPTB3771YPTB1183YPTB1184YPTB1182
YPES386656 YPDSF_3846YPDSF_0056YPDSF_2545YPDSF_2544YPDSF_2546
YPES377628 YPN_3791YPN_3936YPN_2849YPN_2848YPN_2850
YPES360102 YPA_3483YPA_3340YPA_1059YPA_1060YPA_1058
YPES349746 YPANGOLA_A0065YPANGOLA_A3748YPANGOLA_A1426YPANGOLA_A1427YPANGOLA_A1425
YPES214092 YPO0059YPO0129YPO1152YPO1153YPO1151
YPES187410 Y0081Y3908Y3030Y3029Y3031
YENT393305 YE0073YE3995YE2906YE2905YE2907
XORY360094 XOOORF_4369XOOORF_0233XOOORF_4929XOOORF_0231XOOORF_4930
XORY342109 XOO3486XOO0215XOO0420XOO0213XOO0419
XORY291331 XOO3691XOO0235XOO0456XOO0233XOO0455
XFAS405440 XFASM12_0710XFASM12_0709XFASM12_0710XFASM12_0926XFASM12_0050
XFAS183190 PD_0598PD_0597PD_0598PD_0778PD_0043
XFAS160492 XF1357XF1356XF1357XF2099XF0064
XCAM487884 XCC-B100_3414XCC-B100_0413XCC-B100_0415XCC-B100_0410XCC-B100_0416
XCAM316273 XCAORF_1132XCAORF_4127XCAORF_4125XCAORF_4131XCAORF_4124
XCAM314565 XC_3296XC_0397XC_0399XC_0395XC_0400
XCAM190485 XCC0939XCC0385XCC0387XCC0383XCC0388
XAXO190486 XAC1016XAC0385XAC0387XAC0383XAC0388
XAUT78245 XAUT_4043XAUT_3804XAUT_1142XAUT_1117
VVUL216895 VV2_1484VV1_0862VV1_2942VV1_2941VV1_2943
VVUL196600 VVA0304VV0230VV1328VV1329VV1327
VPAR223926 VPA1510VP0148VP1114VP1115VP1113
VFIS312309 VFA0418VF0118VFA0747VFA0746
VCHO345073 VC0395_0352VC0395_A2290VC0395_A0631VC0395_A0632VC0395_A0630
VCHO VCA0886VC2718VC1113VC1114VC1112
TTUR377629 TERTU_0491TERTU_0492TERTU_0491TERTU_0492TERTU_0490
TERY203124 TERY_0352TERY_0351TERY_1067TERY_3533
TELO197221 TLR1157TLR1331TLR1953TLL0661
TDEN292415 TBD_0669TBD_0321TBD_0320TBD_0322TBD_0319
TCRU317025 TCR_1979TCR_1980TCR_1979TCR_1981TCR_1978
STYP99287 STM3709STM3509STM0795STM0796STM0794
STHE292459 STH1872STH809STH1872STH2546
SSP94122 SHEWANA3_4104SHEWANA3_4010SHEWANA3_2518SHEWANA3_2517SHEWANA3_2519
SSP644076 SCH4B_3355SCH4B_2381SCH4B_4140SCH4B_1638
SSON300269 SSO_3787SSO_3545SSO_0755SSO_0756SSO_0754
SSED425104 SSED_0101SSED_0176SSED_2775SSED_2774SSED_2776
SRUB309807 SRU_0382SRU_2682SRU_0517SRU_0756
SPRO399741 SPRO_4824SPRO_4632SPRO_1312SPRO_1313SPRO_1311
SPEA398579 SPEA_0107SPEA_4013SPEA_1802SPEA_1803SPEA_1801
SONE211586 SO_4674SO_4626SO_2739SO_2738SO_2740
SMED366394 SMED_2225SMED_4206SMED_2225SMED_2003
SLOI323850 SHEW_3709SHEW_3630SHEW_1720SHEW_1721SHEW_1719
SLAC55218 SL1157_0815SL1157_0447SL1157_0811SL1157_A0116
SHIGELLA KBLBIOHBIOFBIOCBIOB
SHAL458817 SHAL_4215SHAL_0244SHAL_2476SHAL_2475SHAL_2477
SGLO343509 SG0904SG2324SG0904SG0905SG0903
SFUM335543 SFUM_2235SFUM_3543SFUM_3712SFUM_3502SFUM_1825
SFLE373384 SFV_3911SFV_3420SFV_0759SFV_0760SFV_0757
SFLE198214 AAN45104.1AAN44896.1AAN42361.1AAN42362.1AAN42360.1
SERY405948 SACE_6390SACE_0966SACE_4477SACE_4683
SENT454169 SEHA_C4034SEHA_C3817SEHA_C0922SEHA_C0923SEHA_C0921
SENT321314 SCH_3632SCH_3441SCH_0793SCH_0794SCH_0792
SENT295319 SPA3561SPA3374SPA1957SPA1956SPA1958
SENT220341 STY4086STY4287STY0828STY0829STY0827
SENT209261 T3810T3997T2092T2091T2093
SELO269084 SYC2292_CSYC1470_CSYC2343_DSYC1098_D
SDYS300267 SDY_4050SDY_3663SDY_0830SDY_0829SDY_0831
SDEN318161 SDEN_3615SDEN_3530SDEN_1659SDEN_1660SDEN_1658
SDEG203122 SDE_3138SDE_3137SDE_3138SDE_3137SDE_3139
SCO SCO6800SCO0267SCO5890SCO6510SCO1244
SBOY300268 SBO_3623SBO_3402SBO_0663SBO_0664SBO_0662
SBAL402882 SHEW185_4340SHEW185_4199SHEW185_1752SHEW185_1753SHEW185_1751
SBAL399599 SBAL195_4480SBAL195_4331SBAL195_1796SBAL195_1797SBAL195_1795
SAVE227882 SAV1627SAV1548SAV7094SAV664SAV7093
SALA317655 SALA_2171SALA_0198SALA_1473SALA_1222
RSP101510 RHA1_RO05797RHA1_RO01054RHA1_RO06721RHA1_RO01043
RSOL267608 RSP0961RSC0298RSC1478RSC0360RSC0266
RPOM246200 SPO_3360SPO_A0277SPO_0145SPO_3338
RPAL316056 RPC_1325RPC_1330RPC_1325RPC_2136RPC_3236
RPAL316055 RPE_1359RPE_1653RPE_1359RPE_2208
RPAL258594 RPA1554RPA1568RPA1554RPA1615RPA2045
RMET266264 RMET_4805RMET_0084RMET_0115RMET_0259RMET_0117
REUT381666 H16_B0819H16_A2809H16_A0181H16_A0340H16_A0183
REUT264198 REUT_B4803REUT_A0148REUT_A0312REUT_A0150
PSYR223283 PSPTO_0495PSPTO_0496PSPTO_0495PSPTO_0497PSPTO_0494
PSYR205918 PSYR_4686PSYR_4685PSYR_4686PSYR_4684PSYR_4687
PSTU379731 PST_3865PST_3864PST_3865PST_3863PST_3866
PSP296591 BPRO_4366BPRO_1857BPRO_1579BPRO_3929BPRO_1580
PPUT76869 PPUTGB1_0393PPUTGB1_0394PPUTGB1_0393PPUTGB1_0395PPUTGB1_0392
PPUT351746 PPUT_0389PPUT_0390PPUT_0389PPUT_0391PPUT_0388
PPUT160488 PP_0363PP_0364PP_0363PP_0365PP_0362
PPRO298386 PBPRA1729PBPRA0179PBPRA2328PBPRA2327PBPRA2329
PNAP365044 PNAP_4032PNAP_2121PNAP_4032PNAP_4030
PMEN399739 PMEN_4087PMEN_4086PMEN_4087PMEN_4085PMEN_4088
PLUM243265 PLU4846PLU0204PLU1486PLU1487PLU1485
PING357804 PING_1852PING_3200PING_1923PING_1922PING_1924
PHAL326442 PSHAA2316PSHAA2857PSHAA1608PSHAA1607PSHAA1609
PGIN242619 PG_0481PG_1780PG_1619PG_2081
PFLU220664 PFL_5692PFL_5691PFL_5692PFL_5690PFL_5693
PFLU216595 PFLU5614PFLU5613PFLU5614PFLU5612PFLU5615
PFLU205922 PFL_5175PFL_5174PFL_5175PFL_5173PFL_5176
PENT384676 PSEEN5120PSEEN5119PSEEN5120PSEEN5118PSEEN5121
PDIS435591 BDI_1237BDI_2951BDI_1917BDI_1913
PCAR338963 PCAR_1665PCAR_1664PCAR_1665PCAR_1663
PATL342610 PATL_0061PATL_4230PATL_2556PATL_2555PATL_2557
PAER208964 PA0501PA0502PA0501PA0503PA0500
PAER208963 PA14_06510PA14_06530PA14_06510PA14_06540PA14_06500
OCAR504832 OCAR_4706OCAR_4430OCAR_6726OCAR_4676OCAR_4707
OANT439375 OANT_3595OANT_2822OANT_0127OANT_2823
NSP35761 NOCA_3756NOCA_1790NOCA_2043NOCA_3415
NOCE323261 NOC_2100NOC_2099NOC_2100NOC_2098NOC_2101
NMUL323848 NMUL_A1130NMUL_A1131NMUL_A1130NMUL_A1132NMUL_A1129
NFAR247156 NFA51930NFA18190NFA1190NFA18320
NEUT335283 NEUT_2137NEUT_2136NEUT_2137NEUT_2135NEUT_2138
NEUR228410 NE2299NE2298NE2299NE2297NE2300
MXAN246197 MXAN_3748MXAN_0201MXAN_1258MXAN_2243MXAN_1257
MSP409 M446_0531M446_5168M446_5272M446_5411
MSP400668 MMWYL1_3792MMWYL1_3455MMWYL1_3456MMWYL1_3454MMWYL1_3457
MSP266779 MESO_0443MESO_2526MESO_0443MESO_2088
MPET420662 MPE_A0530MPE_A2442MPE_A0530MPE_A1786
MMAR394221 MMAR10_1598MMAR10_0314MMAR10_1346MMAR10_0058
MMAG342108 AMB1683AMB2759AMB2761AMB2757
MLOT266835 MLL9204MLR2794MLL9099MLL3908MLL5831
MGIL350054 MFLV_2561MFLV_3628MFLV_4692MFLV_3624
MFLA265072 MFLA_2163MFLA_2162MFLA_2163MFLA_2161MFLA_2164
MEXT419610 MEXT_3822MEXT_0857MEXT_4752MEXT_4006
MCAP243233 MCA_1126MCA_1127MCA_1126MCA_1128MCA_1125
MAQU351348 MAQU_2755MAQU_3452MAQU_2755MAQU_2754MAQU_2756
MABS561007 MAB_2946CMAB_2687CMAB_4018MAB_2684C
LSPH444177 BSPH_0909BSPH_4077BSPH_0909BSPH_1760BSPH_3466
LPNE400673 LPC_2593LPC_0888LPC_0887LPC_1798LPC_0886
LPNE297246 LPP0756LPP1430LPP1429LPP2279LPP1428
LPNE297245 LPL0738LPL1554LPL1555LPL2251LPL1556
LPNE272624 LPG0701LPG1474LPG1473LPG2331LPG1472
KPNE272620 GKPORF_B3323GKPORF_B3124GKPORF_B5227GKPORF_B5228GKPORF_B5226
JSP375286 MMA_0121MMA_0121MMA_3154MMA_0123
ILOI283942 IL0270IL0246IL1323IL1322IL1324
HMUK485914 HMUK_2294HMUK_2294HMUK_1274HMUK_2296
HHAL349124 HHAL_0962HHAL_0961HHAL_0962HHAL_0960HHAL_0963
HCHE349521 HCH_01633HCH_05369HCH_05370HCH_05368HCH_05371
HAUR316274 HAUR_2298HAUR_4368HAUR_2298HAUR_3491
HARS204773 HEAR1669HEAR1670HEAR1669HEAR1671HEAR0102
GVIO251221 GLL0397GLL0397GLL1483GLR4328
GURA351605 GURA_3246GURA_3245GURA_3246GURA_3244GURA_2242
GSUL243231 GSU_2629GSU_2628GSU_2629GSU_2627GSU_1584
GOXY290633 GOX1636GOX0720GOX0722GOX2031
GMET269799 GMET_0842GMET_0843GMET_0842GMET_0844GMET_1582
GKAU235909 GK2128GK0989GK2128GK1582GK1570
ESP42895 ENT638_0118ENT638_3825ENT638_1267ENT638_1268ENT638_1266
EFER585054 EFER_3907EFER_3380EFER_2337EFER_2335EFER_2338
ECOO157 KBLBIOHBIOFBIOCBIOB
ECOL83334 ECS4495ECS4255ECS0854ECS0855ECS0853
ECOL585397 ECED1_4303ECED1_4072ECED1_0740ECED1_0741ECED1_0739
ECOL585057 ECIAI39_4138ECIAI39_3892ECIAI39_0752ECIAI39_0753ECIAI39_0751
ECOL585056 ECUMN_4134ECUMN_3871ECUMN_0918ECUMN_0919ECUMN_0917
ECOL585055 EC55989_4084EC55989_3820EC55989_0819EC55989_0820EC55989_0818
ECOL585035 ECS88_4034ECS88_3799ECS88_0793ECS88_0794ECS88_0792
ECOL585034 ECIAI1_3790ECIAI1_3555ECIAI1_0811ECIAI1_0812ECIAI1_0810
ECOL481805 ECOLC_0091ECOLC_0301ECOLC_2867ECOLC_2866ECOLC_2868
ECOL469008 ECBD_0108ECBD_0333ECBD_2847ECBD_2846ECBD_2848
ECOL439855 ECSMS35_3954ECSMS35_3693ECSMS35_0799ECSMS35_0800ECSMS35_0798
ECOL413997 ECB_03475ECB_03264ECB_00743ECB_00744ECB_00742
ECOL409438 ECSE_3900ECSE_3679ECSE_0829ECSE_0830ECSE_0828
ECOL405955 APECO1_2838APECO1_3054APECO1_1313APECO1_1312APECO1_1314
ECOL364106 UTI89_C4163UTI89_C3913UTI89_C0774UTI89_C0775UTI89_C0773
ECOL362663 ECP_3718ECP_3498ECP_0790ECP_0791ECP_0789
ECOL331111 ECE24377A_4121ECE24377A_3887ECE24377A_0839ECE24377A_0840ECE24377A_0838
ECOL316407 ECK3607:JW3592:B3617ECK3399:JW3375:B3412ECK0765:JW0759:B0776ECK0766:JW0760:B0777ECK0764:JW0758:B0775
ECOL199310 C4444C4189C0856C0857C0855
ECAR218491 ECA0167ECA4132ECA2824ECA2823ECA2825
DARO159087 DARO_2897DARO_2898DARO_2897DARO_2899DARO_0618
CVIO243365 CV_1650CV_4377CV_4380CV_4376CV_4381
CVES412965 COSY_0760COSY_0761COSY_0760COSY_0243COSY_0459
CTEP194439 CT_1951CT_0051CT_0049CT_0052
CSP78 CAUL_5431CAUL_2393CAUL_2875CAUL_1979CAUL_4625
CSAL290398 CSAL_1166CSAL_1165CSAL_1166CSAL_1164CSAL_1167
CRUT413404 RMAG_0835RMAG_0836RMAG_0835RMAG_0257RMAG_0499
CPSY167879 CPS_0120CPS_0217CPS_2595CPS_2596CPS_2594
CJAP155077 CJA_0427CJA_0428CJA_0427CJA_0428CJA_0426
CDES477974 DAUD_1326DAUD_1326DAUD_1458DAUD_1331
CBUR434922 COXBU7E912_1996COXBU7E912_1042COXBU7E912_1041COXBU7E912_1611COXBU7E912_1040
CBUR360115 COXBURSA331_A0200COXBURSA331_A0935COXBURSA331_A0934COXBURSA331_A0573COXBURSA331_A0933
CBUR227377 CBU_0111CBU_1005CBU_1006CBU_0467CBU_1007
CAULO CC1162CC2230CC1576CC3521
BWEI315730 BCERKBAB4_0534BCERKBAB4_3011BCERKBAB4_3949BCERKBAB4_3947BCERKBAB4_3946
BVIE269482 BCEP1808_3788BCEP1808_4725BCEP1808_3027BCEP1808_2949BCEP1808_3029
BTHU412694 BALH_0558BALH_2964BALH_3733BALH_3731BALH_3730
BTHU281309 BT9727_0530BT9727_3084BT9727_3859BT9727_3857BT9727_3856
BTHA271848 BTH_II0005BTH_II1664BTH_I0339BTH_I2377BTH_I0337
BSUI470137 BSUIS_A0348BSUIS_B0491BSUIS_A0119BSUIS_B0492
BSUI204722 BR_0319BR_A0491BR_0114BR_A0492
BSUB BSU17000BSU10900BSU30220BSU30200
BSP376 BRADO6672BRADO2319BRADO1858BRADO2424
BSP36773 BCEP18194_B3179BCEP18194_A6276BCEP18194_B0726BCEP18194_A6278
BPSE320373 BURPS668_A0005BURPS668_0390BURPS668_3033BURPS668_0388
BPSE320372 BURPS1710B_B1775BURPS1710B_A0610BURPS1710B_A3376BURPS1710B_A0608
BPSE272560 BPSS0005BPSL0366BPSL2640BPSL0364
BPET94624 BPET0010BPET0010BPET0495BPET3663
BOVI236 GBOORF0347GBOORFA0478GBOORF0118GBOORFA0479
BMEL359391 BAB1_0349BAB2_0745BAB1_0111BAB2_0744
BMEL224914 BMEI1604BMEII0776BMEI1834BMEII0775
BMAL320389 BMA10247_A0006BMA10247_2271BMA10247_2034BMA10247_2269
BMAL320388 BMASAVP1_1151BMASAVP1_A3079BMASAVP1_A0747BMASAVP1_A3077
BMAL243160 BMA_A0005BMA_0101BMA_2164BMA_0103
BLIC279010 BL03659BL00954BL05017BL00956
BJAP224911 BLL1200BLR3878BLR2097BLR0060BLR2095
BHAL272558 BH3907BH3907BH3909BH1748
BCIC186490 BCI_0485BCI_0247BCI_0248BCI_0246
BCER572264 BCA_0654BCA_3378BCA_4230BCA_4228BCA_4227
BCER405917 BCE_0688BCE_3307BCE_4187BCE_4185BCE_4184
BCER315749 BCER98_0533BCER98_2104BCER98_2816BCER98_2814BCER98_2813
BCER288681 BCE33L0530BCE33L2995BCE33L3873BCE33L3871BCE33L3870
BCER226900 BC_0621BC_3312BC_4117BC_4115BC_4114
BCEN331272 BCEN2424_5701BCEN2424_6365BCEN2424_2932BCEN2424_4343BCEN2424_2934
BCEN331271 BCEN_5158BCEN_1463BCEN_2318BCEN_4023BCEN_2320
BCAN483179 BCAN_A0328BCAN_B0493BCAN_A0117BCAN_B0494
BANT592021 BAA_0702BAA_3912BAA_4361BAA_4359BAA_4358
BANT568206 BAMEG_3967BAMEG_0744BAMEG_4379BAMEG_4377BAMEG_4376
BANT261594 GBAA0620GBAA3887GBAA4339GBAA4337GBAA4336
BANT260799 BAS0586BAS3601BAS4026BAS4024BAS4023
BAMB398577 BAMMC406_3115BAMMC406_5598BAMMC406_2844BAMMC406_4895BAMMC406_2846
BAMB339670 BAMB_4972BAMB_4321BAMB_2981BAMB_5124BAMB_2983
BABO262698 BRUAB1_0345BRUAB2_0731BRUAB1_0111BRUAB2_0730
ASP76114 EBA6018EBA6017EBA6018EBA6013EBA1066
ASP62928 AZO1889AZO1890AZO1889AZO1891AZO2817
ASP1667 ARTH_1311ARTH_0912ARTH_1957ARTH_0875
ASAL382245 ASA_0091ASA_4098ASA_2876ASA_2875ASA_2877
AHYD196024 AHA_4234AHA_0299AHA_1490AHA_1491AHA_1489
AFER243159 AFE_2785AFE_2784AFE_2785AFE_2783AFE_2769
AEHR187272 MLG_2435MLG_2434MLG_2435MLG_2433MLG_2436
ADEH290397 ADEH_2094ADEH_3732ADEH_3452ADEH_3733ADEH_3453
ABOR393595 ABO_2219ABO_2218ABO_2219ABO_2217ABO_2220
ABAU360910 BAV2449BAV0593BAV2449BAV2451BAV0831
AAVE397945 AAVE_3843AAVE_3182AAVE_3843AAVE_2207AAVE_2518
AAUR290340 AAUR_1460AAUR_3178AAUR_1088AAUR_1091


Organism features enriched in list (features available for 210 out of the 227 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00010701892
Disease:Brucellosis 0.005880255
Disease:Bubonic_plague 0.002085566
Disease:Dysentery 0.002085566
Disease:Gastroenteritis 0.00251491013
Endospores:No 2.179e-1140211
GC_Content_Range4:0-40 4.992e-2621213
GC_Content_Range4:40-60 1.095e-7110224
GC_Content_Range4:60-100 7.604e-879145
GC_Content_Range7:30-40 4.595e-1521166
GC_Content_Range7:50-60 2.199e-1169107
GC_Content_Range7:60-70 1.138e-774134
Genome_Size_Range5:0-2 2.647e-332155
Genome_Size_Range5:2-4 0.000019949197
Genome_Size_Range5:4-6 2.305e-27125184
Genome_Size_Range5:6-10 1.143e-73447
Genome_Size_Range9:0-1 0.0000666127
Genome_Size_Range9:1-2 9.728e-281128
Genome_Size_Range9:2-3 1.465e-720120
Genome_Size_Range9:4-5 6.150e-75696
Genome_Size_Range9:5-6 9.624e-196988
Genome_Size_Range9:6-8 4.851e-62738
Gram_Stain:Gram_Neg 3.204e-15164333
Gram_Stain:Gram_Pos 2.004e-827150
Habitat:Host-associated 0.000041553206
Habitat:Multiple 0.001604079178
Habitat:Terrestrial 0.00017602131
Motility:No 1.707e-1122151
Motility:Yes 2.524e-16143267
Optimal_temp.:- 0.0007205110257
Optimal_temp.:25-30 0.00282801319
Optimal_temp.:37 0.006471428106
Oxygen_Req:Anaerobic 5.090e-1110102
Oxygen_Req:Facultative 3.921e-697201
Pathogenic_in:Animal 0.00926623266
Pathogenic_in:Plant 0.00273861115
Shape:Coccus 1.384e-10682
Shape:Rod 5.157e-19174347
Shape:Spiral 0.0001982334
Temp._range:Mesophilic 0.0016632183473
Temp._range:Thermophilic 0.0024343535



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 237
Effective number of orgs (counting one per cluster within 468 clusters): 191

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TFUS269800 ncbi Thermobifida fusca YX0
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis0
SARE391037 ncbi Salinispora arenicola CNS-2051
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1181
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PRUM264731 ncbi Prevotella ruminicola 231
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM20
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
JSP290400 ncbi Jannaschia sp. CCS11
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-11
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium1
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HINF71421 ncbi Haemophilus influenzae Rd KW201
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
EFAE226185 ncbi Enterococcus faecalis V5830
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-11
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIF272563 ncbi Clostridium difficile 6301
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/31
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BQUI283165 ncbi Bartonella quintana Toulouse0
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K161
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP232721 ncbi Acidovorax sp. JS421
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
ACEL351607 ncbi Acidothermus cellulolyticus 11B1


Names of the homologs of the genes in the group in each of these orgs
  EG10512   EG10122   EG10121   EG10119   EG10118   
WSUC273121 WS1500
WPIP955
WPIP80849
VEIS391735 VEIS_2228
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX2240
TWHI218496
TWHI203267
TSP28240
TROS309801 TRD_A0259
TPET390874 TPET_0559
TPEN368408
TPAL243276
TMAR243274
TFUS269800
TDEN326298
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP387093 SUN_0087
SSP321332
SSOL273057 SSO2262
SSAP342451 SSP2205
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SGOR29390
SARE391037 SARE_1518
SAGA211110 GBS0511
SAGA208435 SAG_0464
SAGA205921 SAK_0566
SACI330779 SACI_2213
RXYL266117 RXYL_2405
RTYP257363
RSPH349102 RSPH17025_1900
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFER338969 RFER_2292
RFEL315456 RF_0527
RCON272944
RCAS383372 RCAS_4082
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PTHE370438 PTH_0521
PRUM264731 GFRORF0463
PPEN278197
PMAR74546 PMT9312_1104
PMAR167542 P9515ORF_1238
PMAR167540 PMM1093
PISL384616
PINT246198 PIN_A0756
PFUR186497 PF0265
PAST100379
PARS340102
PARC259536 PSYC_1861
PAER178306
OTSU357244
NWIN323098 NWI_0243
NSP387092 NIS_1653
NSEN222891 NSE_0612
MTHE349307
MTHE264732 MOTH_1176
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748 MMOB5780
MMAZ192952 MM0529
MMAR444158 MMARC6_1096
MMAR426368
MMAR402880 MMARC5_0002
MMAR267377 MMP1574
MLEP272631 ML1220
MLAB410358
MKAN190192
MJAN243232 MJ_1298
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0834
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797 MBAR_A0124
MART243272
MAEO419665 MAEO_1419
LXYL281090
LWEL386043 LWE1692
LSAK314315 LSA0509
LREU557436
LPLA220668
LMON265669 LMOF2365_1698
LMON169963 LMO1674
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINN272626 LIN1782
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LBOR355277 LBJ_1870
LBOR355276 LBL_1414
LBIF456481 LEPBI_I0828
LBIF355278 LBF_0798
LACI272621
KRAD266940 KRAD_2427
JSP290400 JANN_3724
IHOS453591
HWAL362976
HSP64091 VNG2147G
HSOM228400 HSM_1485
HSOM205914 HS_1010
HSAL478009 OE3994F
HPYL85963
HPYL357544
HPY
HNEP81032 HNE_0048
HMOD498761 HM1_1678
HINF71421 HI_1022
HHEP235279
HBUT415426
HACI382638
FNUC190304 FN1000
FMAG334413
ERUM302409 ERGA_CDS_06730
ERUM254945 ERWE_CDS_06820
EFAE226185
DVUL882 DVU_2558
DSP255470
DSP216389
DRED349161 DRED_0430
DNOD246195
DETH243164
CTRA471473
CTRA471472
CTET212717 CTC_00151
CSUL444179
CPHY357809
CPER289380
CPER195103 CPF_1795
CPER195102 CPE1544
CPEL335992
CNOV386415 NT01CX_1470
CMUR243161
CMIC443906 CMM_2872
CMIC31964 CMS2177
CMET456442 MBOO_1663
CMAQ397948
CKOR374847 KCR_0632
CKLU431943 CKL_1696
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK0682
CHYD246194 CHY_0889
CHOM360107 CHAB381_0711
CGLU196627 CG0095
CFET360106
CFEL264202 CF0298
CEFF196164 CE0089
CDIF272563 CD0297
CCUR360105
CCON360104
CCAV227941
CBOT536232 CLM_2468
CBOT515621 CLJ_B2472
CBOT498213 CLD_2316
CBOT441772 CLI_2309
CBOT441771 CLC_2183
CBOT441770 CLB_2200
CBOT36826 CBO2259
CBLO291272
CBLO203907
CBEI290402 CBEI_1914
CACE272562 CAC0210
CABO218497 CAB685
BTUR314724
BTRI382640
BSP107806 BU291
BQUI283165
BLON206672
BHER314723
BHEN283166
BGAR290434
BCLA66692 ABC2970
BBUR224326
BBAC360095
BBAC264462 BD3625
BAPH372461 BCC_356
BAPH198804 BUSG280
BAFZ390236
AYEL322098
AURANTIMONAS
ASP232721 AJS_2045
APHA212042 APH_0218
APER272557
ANAE240017
ALAI441768
ACEL351607 ACEL_1035


Organism features enriched in list (features available for 223 out of the 237 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 2.014e-96192
Arrangment:Clusters 0.0026219117
Disease:Botulism 0.007962455
Disease:Wide_range_of_infections 0.00002191111
Endospores:No 8.440e-12119211
GC_Content_Range4:0-40 3.049e-25140213
GC_Content_Range4:40-60 5.238e-661224
GC_Content_Range4:60-100 3.852e-1222145
GC_Content_Range7:0-30 1.165e-164447
GC_Content_Range7:30-40 7.085e-1096166
GC_Content_Range7:50-60 8.981e-818107
GC_Content_Range7:60-70 9.786e-1318134
Genome_Size_Range5:0-2 8.131e-35123155
Genome_Size_Range5:4-6 1.430e-2220184
Genome_Size_Range9:0-1 9.496e-112627
Genome_Size_Range9:1-2 8.409e-2397128
Genome_Size_Range9:4-5 4.220e-71696
Genome_Size_Range9:5-6 3.399e-15488
Gram_Stain:Gram_Neg 2.106e-1091333
Gram_Stain:Gram_Pos 2.385e-681150
Habitat:Host-associated 0.002941893206
Habitat:Terrestrial 0.0042776531
Motility:No 0.000038378151
Motility:Yes 0.000026179267
Optimal_temp.:- 0.005049085257
Optimal_temp.:37 0.000597455106
Oxygen_Req:Aerobic 0.000010048185
Oxygen_Req:Anaerobic 7.110e-863102
Oxygen_Req:Microaerophilic 0.00933791218
Pathogenic_in:Animal 0.00889571766
Pathogenic_in:Swine 0.007962455
Salinity:Non-halophilic 0.003757852106
Shape:Coccus 0.00182984382
Shape:Irregular_coccus 0.00496271217
Shape:Rod 3.588e-1195347
Shape:Sphere 0.00003681619
Shape:Spiral 2.926e-62634
Temp._range:Hyperthermophilic 0.00148661623
Temp._range:Thermophilic 0.00925502035



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951560.6110
PWY-5918 (heme biosynthesis I)2721830.5642
GLYCOCAT-PWY (glycogen degradation I)2461690.5415
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491220.5294
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652110.5282
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861830.5274
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251560.5140
AST-PWY (arginine degradation II (AST pathway))1201040.5098
PWY-5340 (sulfate activation for sulfonation)3852140.5060
PWY-4041 (γ-glutamyl cycle)2791760.4986
PWY-5148 (acyl-CoA hydrolysis)2271540.4941
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181500.4935
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001820.4852
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111860.4848
PWY-561 (superpathway of glyoxylate cycle)1621220.4788
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391950.4787
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222200.4726
GLYOXYLATE-BYPASS (glyoxylate cycle)1691240.4683
TYRFUMCAT-PWY (tyrosine degradation I)1841310.4676
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891750.4662
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001790.4652
PWY-1269 (CMP-KDO biosynthesis I)3251880.4646
GLUCARDEG-PWY (D-glucarate degradation I)1521150.4630
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911750.4611
GLUTAMINDEG-PWY (glutamine degradation I)1911330.4587
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761260.4584
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491580.4581
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491580.4581
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961760.4552
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901730.4502
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481930.4447
GLUCONSUPER-PWY (D-gluconate degradation)2291470.4397
VALDEG-PWY (valine degradation I)2901710.4369
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162120.4279
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96810.4252
PWY-5188 (tetrapyrrole biosynthesis I)4392180.4244
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982060.4234
PWY-5913 (TCA cycle variation IV)3011730.4227
PWY-6196 (serine racemization)102840.4222
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291830.4217
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831240.4197
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561110.4169
PWY0-501 (lipoate biosynthesis and incorporation I)3852010.4168
THREONINE-DEG2-PWY (threonine degradation II)2141370.4146
GALACTARDEG-PWY (D-galactarate degradation I)1511080.4124
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)1351000.4113
PWY-6087 (4-chlorocatechol degradation)2231400.4087
PWY-5028 (histidine degradation II)130970.4074
PWY-6134 (tyrosine biosynthesis IV)89750.4058
P344-PWY (acrylonitrile degradation)2101340.4056
PWY-6374 (vibriobactin biosynthesis)77680.4048
PWY0-981 (taurine degradation IV)106840.4028
PWY-5194 (siroheme biosynthesis)3121740.4024
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261790.4021
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911250.4008
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911250.4008



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10122   EG10121   EG10119   EG10118   
EG105120.9992320.9997020.9989910.998768
EG101220.9992080.9991660.998575
EG101210.9997570.999841
EG101190.999602
EG10118



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PAIRWISE BLAST SCORES:

  EG10512   EG10122   EG10121   EG10119   EG10118   
EG105120.0f0----
EG10122-0.0f0---
EG101215.0e-40-0.0f0--
EG10119---0.0f0-
EG10118----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.800, average score: 0.729)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9992 EG10121 (bioF) 7KAPSYN-MONOMER (8-amino-7-oxononanoate synthase monomer)
             0.4628 0.0605 EG10277 (fabH) FABH-MONOMER (FabH)
   *in cand* 0.9995 0.9990 EG10119 (bioC) EG10119-MONOMER (BioC methyltransferase)
             0.4614 0.0698 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
             0.4791 0.3132 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.2189 0.1102 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.3964 0.2663 EG10274 (fabB) FABB-MONOMER (FabB)
   *in cand* 0.9992 0.9986 EG10122 (bioH) EG10122-MONOMER (carboxylesterase)
             0.9691 0.8524 EG10117 (bioA) DAPASYN-MONOMER (adenosylmethionine-8-amino-7-oxononanoate aminotransferase monomer)
   *in cand* 0.9994 0.9986 EG10118 (bioB) BIOTIN-SYN-MONOMER (biotin synthase monomer)
             0.9994 0.9985 EG10120 (bioD) DETHIOBIOTIN-SYN-MONOMER (dethiobiotin synthetase monomer)
             0.4909 0.1252 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9988 EG10512 (kbl) AKBLIG-MONOMER (Kbl)

- PWY-6519 (7-keto-8-aminopelargonate biosynthesis I) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.600, average score: 0.695)
  Genes in pathway or complex:
   *in cand* 0.9992 0.9986 EG10122 (bioH) EG10122-MONOMER (carboxylesterase)
             0.3964 0.2663 EG10274 (fabB) FABB-MONOMER (FabB)
             0.2189 0.1102 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.4791 0.3132 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.4614 0.0698 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
   *in cand* 0.9995 0.9990 EG10119 (bioC) EG10119-MONOMER (BioC methyltransferase)
             0.4628 0.0605 EG10277 (fabH) FABH-MONOMER (FabH)
   *in cand* 0.9997 0.9992 EG10121 (bioF) 7KAPSYN-MONOMER (8-amino-7-oxononanoate synthase monomer)
             0.4909 0.1252 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9986 EG10118 (bioB) BIOTIN-SYN-MONOMER (biotin synthase monomer)
   *in cand* 0.9993 0.9988 EG10512 (kbl) AKBLIG-MONOMER (Kbl)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10118 EG10119 EG10121 (centered at EG10121)
EG10512 (centered at EG10512)
EG10122 (centered at EG10122)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10512   EG10122   EG10121   EG10119   EG10118   
311/623262/623305/623275/623405/623
AAEO224324:0:Tyes0---241
AAUR290340:2:Tyes36820390-3
AAVE397945:0:Tyes160396016030306
ABAC204669:0:Tyes2748-27480-
ABAU360910:0:Tyes1866018661868234
ABOR393595:0:Tyes21203
ABUT367737:0:Tyes---900
ACAU438753:0:Tyes-1568--0
ACEL351607:0:Tyes----0
ACRY349163:8:Tyes0-0-1
ADEH290397:0:Tyes01657137216581373
AEHR187272:0:Tyes21203
AFER243159:0:Tyes161516140
AFUL224325:0:Tyes-1802-0-
AHYD196024:0:Tyes37960116611671165
AMAR234826:0:Tyes---2390
AMAR329726:9:Tyes02499--995
AMET293826:0:Tyes378-378-0
AORE350688:0:Tyes0-0--
APHA212042:0:Tyes----0
APLE416269:0:Tyes--8288260
APLE434271:0:Tno--8048020
ASAL382245:5:Tyes03868268626852687
ASP1667:3:Tyes43736-10850
ASP232721:2:Tyes----0
ASP62928:0:Tyes0102937
ASP62977:0:Tyes-0--1129
ASP76114:2:Tyes29212920292129190
AVAR240292:3:Tyes--0-1571
BABO262698:0:Tno--1-0
BABO262698:1:Tno222--0-
BAMB339670:2:Tno6480-800-
BAMB339670:3:Tno--0-2
BAMB398577:1:Tno-0---
BAMB398577:2:Tno0--1757-
BAMB398577:3:Tno--0-2
BAMY326423:0:Tyes0-143-141
BANT260799:0:Tno03014343534333432
BANT261594:2:Tno02973341034083407
BANT568206:2:Tyes31690355535533552
BANT592021:2:Tno03158359735953594
BAPH198804:0:Tyes----0
BAPH372461:0:Tyes-0---
BBAC264462:0:Tyes---0-
BBRO257310:0:Tyes--201620180
BCAN483179:0:Tno--0-1
BCAN483179:1:Tno204--0-
BCEN331271:1:Tno1123--0-
BCEN331271:2:Tno-0860-862
BCEN331272:1:Tyes-0---
BCEN331272:2:Tyes1357--0-
BCEN331272:3:Tyes--0-2
BCER226900:1:Tyes02639342334213420
BCER288681:0:Tno02470334133393338
BCER315749:1:Tyes01484216621642163
BCER405917:1:Tyes02460330433023301
BCER572264:1:Tno02675350935073506
BCIC186490:0:Tyes-227120
BCLA66692:0:Tyes---0-
BFRA272559:1:Tyes1247-0-1
BFRA295405:0:Tno1410-0-1
BHAL272558:0:Tyes2174-217421760
BJAP224911:0:Fyes11503842205702055
BLIC279010:0:Tyes1636-5120514
BMAL243160:0:Tno0----
BMAL243160:1:Tno--018342
BMAL320388:0:Tno0----
BMAL320388:1:Tno--227702275
BMAL320389:0:Tyes0----
BMAL320389:1:Tyes--2360234
BMEL224914:0:Tno--1-0
BMEL224914:1:Tno0--234-
BMEL359391:0:Tno--1-0
BMEL359391:1:Tno210--0-
BOVI236:0:Tyes--0-1
BOVI236:1:Tyes196--0-
BPAR257311:0:Tno--6206180
BPER257313:0:Tyes--20525
BPET94624:0:Tyes0-04873700
BPSE272560:0:Tyes0----
BPSE272560:1:Tyes--222910
BPSE320372:0:Tno0----
BPSE320372:1:Tno--226450
BPSE320373:0:Tno0----
BPSE320373:1:Tno--225410
BPUM315750:0:Tyes0-0-1178
BSP107806:2:Tyes----0
BSP36773:1:Tyes2453--0-
BSP36773:2:Tyes--0-2
BSP376:0:Tyes4573423-0523
BSUB:0:Tyes65202023-2021
BSUI204722:0:Tyes--0-1
BSUI204722:1:Tyes196--0-
BSUI470137:0:Tno--0-1
BSUI470137:1:Tno221--0-
BTHA271848:0:Tno01651---
BTHA271848:1:Tno--220060
BTHE226186:0:Tyes0-74-73
BTHU281309:1:Tno02530330132993298
BTHU412694:1:Tno02305303630343033
BVIE269482:6:Tyes0911---
BVIE269482:7:Tyes--78080
BWEI315730:4:Tyes02419334133393338
BXEN266265:1:Tyes03210--
CABO218497:0:Tyes----0
CACE272562:1:Tyes----0
CAULO:0:Tyes01085424-2392
CBEI290402:0:Tyes----0
CBOT36826:1:Tno----0
CBOT441770:0:Tyes----0
CBOT441771:0:Tno----0
CBOT441772:1:Tno----0
CBOT498213:1:Tno----0
CBOT508765:1:Tyes-0--48
CBOT515621:2:Tyes----0
CBOT536232:0:Tno----0
CBUR227377:1:Tyes0856857343858
CBUR360115:1:Tno0690689351688
CBUR434922:2:Tno914215500
CCHL340177:0:Tyes14816520--
CDES477974:0:Tyes0-01345
CDIF272563:1:Tyes----0
CDIP257309:0:Tyes--1263-0
CEFF196164:0:Fyes----0
CFEL264202:1:Tyes----0
CGLU196627:0:Tyes----0
CHOM360107:1:Tyes----0
CHUT269798:0:Tyes-0--1986
CHYD246194:0:Tyes----0
CJAP155077:0:Tyes12120
CJEI306537:0:Tyes----0
CKLU431943:1:Tyes----0
CKOR374847:0:Tyes0----
CMET456442:0:Tyes---0-
CMIC31964:2:Tyes-0---
CMIC443906:2:Tyes-0---
CNOV386415:0:Tyes----0
CPER195102:1:Tyes----0
CPER195103:0:Tno----0
CPNE115711:1:Tyes--1-0
CPNE115713:0:Tno--0-1
CPNE138677:0:Tno--0-1
CPNE182082:0:Tno--0-1
CPRO264201:0:Fyes0328---
CPSY167879:0:Tyes097242424252423
CRUT413404:0:Tyes5365375360226
CSAL290398:0:Tyes21203
CSP501479:7:Fyes---0-
CSP501479:8:Fyes82---0
CSP78:0:Tyes0----
CSP78:2:Tyes-41690402676
CTEP194439:0:Tyes1876-203
CTET212717:0:Tyes----0
CVES412965:0:Tyes4944954940205
CVIO243365:0:Tyes02799280227982803
DARO159087:0:Tyes22972298229722990
DDES207559:0:Tyes--7-0
DGEO319795:0:Tyes-0---
DGEO319795:1:Tyes0-0--
DHAF138119:0:Tyes-0-539-
DOLE96561:0:Tyes-10950-2
DPSY177439:2:Tyes--0-2
DRAD243230:3:Tyes1896--0-
DRED349161:0:Tyes----0
DSHI398580:5:Tyes0-02209-
DVUL882:1:Tyes----0
ECAN269484:0:Tyes---0656
ECAR218491:0:Tyes04027268026792681
ECHA205920:0:Tyes---0304
ECOL199310:0:Tno35213268120
ECOL316407:0:Tno28853093120
ECOL331111:6:Tno31642934120
ECOL362663:0:Tno29242707120
ECOL364106:1:Tno33793129120
ECOL405955:2:Tyes29942774120
ECOL409438:6:Tyes31202898120
ECOL413997:0:Tno27432535120
ECOL439855:4:Tno30682809120
ECOL469008:0:Tno0220272927282730
ECOL481805:0:Tno0205277827772779
ECOL585034:0:Tno29362709120
ECOL585035:0:Tno31272900120
ECOL585055:0:Tno32222971120
ECOL585056:2:Tno32112956120
ECOL585057:0:Tno33813147120
ECOL585397:0:Tno34593239120
ECOL83334:0:Tno37203478120
ECOLI:0:Tno29082696120
ECOO157:0:Tno37523500120
EFER585054:1:Tyes15621055203
ELIT314225:0:Tyes0--107727
ERUM254945:0:Tyes----0
ERUM302409:0:Tno----0
ESP42895:1:Tyes03745117311741172
FALN326424:0:Tyes-964-0947
FJOH376686:0:Tyes0---102
FNOD381764:0:Tyes8060806--
FNUC190304:0:Tyes----0
FPHI484022:1:Tyes0---1638
FRANT:0:Tno0---211
FSP106370:0:Tyes-0--160
FSP1855:0:Tyes-017-15
FSUC59374:0:Tyes0---816
FTUL351581:0:Tno225---0
FTUL393011:0:Tno179---0
FTUL393115:0:Tyes0---209
FTUL401614:0:Tyes0---187
FTUL418136:0:Tno548---0
FTUL458234:0:Tno198---0
GBET391165:0:Tyes--0951
GFOR411154:0:Tyes10550--1246
GKAU235909:1:Tyes115301153594582
GMET269799:1:Tyes0102742
GOXY290633:5:Tyes907-021302
GSUL243231:0:Tyes10421041104210400
GTHE420246:1:Tyes-0-545534
GURA351605:0:Tyes9939929939910
GVIO251221:0:Tyes0-011023977
HARS204773:0:Tyes14711472147114730
HAUR316274:2:Tyes0208801199-
HCHE349521:0:Tyes03593359435923595
HDUC233412:0:Tyes--5745720
HHAL349124:0:Tyes21203
HINF281310:0:Tyes--342-0
HINF374930:0:Tyes--0-270
HINF71421:0:Tno----0
HMAR272569:8:Tyes0-02034-
HMOD498761:0:Tyes----0
HMUK485914:1:Tyes1032-103201034
HNEP81032:0:Tyes----0
HSAL478009:4:Tyes---0-
HSOM205914:1:Tyes----0
HSOM228400:0:Tno----0
HSP64091:2:Tno---0-
ILOI283942:0:Tyes240110711061108
JSP290400:1:Tyes---0-
JSP375286:0:Tyes0-030782
KPNE272620:2:Tyes1980203820392037
KRAD266940:2:Fyes-0---
LBIF355278:2:Tyes----0
LBIF456481:2:Tno----0
LBOR355276:1:Tyes----0
LBOR355277:1:Tno----0
LCHO395495:0:Tyes0-0-2
LINN272626:1:Tno-0---
LINT189518:1:Tyes--0-3
LINT267671:1:Tno--3-0
LINT363253:3:Tyes--130
LMON169963:0:Tno-0---
LMON265669:0:Tyes-0---
LPNE272624:0:Tno07727711628770
LPNE297245:1:Fno08088091512810
LPNE297246:1:Fyes06666651522664
LPNE400673:0:Tno1670218890
LSAK314315:0:Tyes0----
LSPH444177:1:Tyes0302308312433
LWEL386043:0:Tyes-0---
MABS561007:1:Tyes-264313400
MACE188937:0:Tyes-0-700-
MAEO419665:0:Tyes--0--
MAER449447:0:Tyes40482040--0
MAQU351348:2:Tyes1694102
MAVI243243:0:Tyes---02314
MBAR269797:1:Tyes---0-
MBOV233413:0:Tno0--591597
MBOV410289:0:Tno0--601573
MCAP243233:0:Tyes12130
MEXT419610:0:Tyes-2973039083158
MFLA265072:0:Tyes21203
MGIL350054:3:Tyes-0107821441074
MHUN323259:0:Tyes---0-
MJAN243232:2:Tyes--0--
MLEP272631:0:Tyes----0
MLOT266835:1:Tyes87-0--
MLOT266835:2:Tyes-0-8832404
MMAG342108:0:Tyes0-107610781074
MMAR267377:0:Tyes--0--
MMAR368407:0:Tyes-0-349-
MMAR394221:0:Tyes15362531284-0
MMAR402880:1:Tyes--0--
MMAR444158:0:Tyes--0--
MMAZ192952:0:Tyes-0---
MMOB267748:0:Tyes0----
MPET420662:1:Tyes019060-1253
MSME246196:0:Tyes-1499-910
MSP164756:0:Fno-0---
MSP164756:1:Tno---10370
MSP164757:0:Tno-0-26851437
MSP189918:0:Tyes-0---
MSP189918:2:Tyes---10560
MSP266779:3:Tyes0209501664-
MSP400668:0:Tyes3561203
MSP409:2:Tyes-0445045554693
MSUC221988:0:Tyes---01089
MTBCDC:0:Tno0--601651
MTBRV:0:Tno0--571572
MTHE264732:0:Tyes---0-
MTUB336982:0:Tno0--591575
MTUB419947:0:Tyes0--591611
MVAN350058:0:Tyes-105-18170
MXAN246197:0:Tyes34170102519691024
NARO279238:0:Tyes2435-0-1
NEUR228410:0:Tyes21203
NEUT335283:2:Tyes21203
NFAR247156:2:Tyes-5143173401750
NGON242231:0:Tyes-821--0
NHAM323097:2:Tyes--2451-0
NMEN122586:0:Tno-0--882
NMEN122587:0:Tyes-838637-0
NMEN272831:0:Tno-01233-738
NMEN374833:0:Tno-796--0
NMUL323848:3:Tyes12130
NOCE323261:1:Tyes21203
NPHA348780:2:Tyes1648--01650
NSEN222891:0:Tyes----0
NSP103690:6:Tyes--0-1555
NSP35761:1:Tyes19760-2581633
NSP387092:0:Tyes----0
NWIN323098:0:Tyes----0
OANT439375:4:Tyes-7700-1
OANT439375:5:Tyes---0-
OCAR504832:0:Tyes27602296246277
OIHE221109:0:Tyes1814--0-
PABY272844:0:Tyes0-0--
PACN267747:0:Tyes0---1029
PAER208963:0:Tyes12130
PAER208964:0:Tno12130
PARC259536:0:Tyes----0
PATL342610:0:Tyes04203251225112513
PCAR338963:0:Tyes2120-
PCRY335284:1:Tyes-117304-0
PDIS435591:0:Tyes0-1705673669
PENT384676:0:Tyes21203
PFLU205922:0:Tyes21203
PFLU216595:1:Tyes21203
PFLU220664:0:Tyes21203
PFUR186497:0:Tyes0----
PGIN242619:0:Tyes0-11309921396
PHAL326442:1:Tyes7291252102
PHOR70601:0:Tyes0-0--
PING357804:0:Tyes01258666567
PINT246198:1:Tyes0----
PLUM243265:0:Fyes47330132513261324
PLUT319225:0:Tyes011261766--
PMAR146891:0:Tyes---4720
PMAR167539:0:Tyes-149529-0
PMAR167540:0:Tyes----0
PMAR167542:0:Tyes----0
PMAR167546:0:Tyes---4620
PMAR167555:0:Tyes--389-0
PMAR59920:0:Tno--352-0
PMAR74546:0:Tyes----0
PMAR74547:0:Tyes--437-0
PMAR93060:0:Tyes---5170
PMEN399739:0:Tyes21203
PMOB403833:0:Tyes0-0--
PMUL272843:1:Tyes--1522-0
PNAP365044:8:Tyes191501915-1913
PPRO298386:2:Tyes15500214421432145
PPUT160488:0:Tno12130
PPUT351746:0:Tyes12130
PPUT76869:0:Tno12130
PRUM264731:0:Tyes0----
PSP117:0:Tyes--0-4012
PSP296591:2:Tyes2770277023331
PSP312153:0:Tyes0-0-2
PSP56811:2:Tyes-02355-2156
PSTU379731:0:Tyes21203
PSYR205918:0:Tyes21203
PSYR223283:2:Tyes12130
PTHE370438:0:Tyes----0
RALB246199:0:Tyes---1690
RCAS383372:0:Tyes-0---
RDEN375451:4:Tyes6616490--
RETL347834:4:Tyes-0---
RETL347834:5:Tyes0----
REUT264198:2:Tyes0----
REUT264198:3:Tyes--01652
REUT381666:1:Tyes0----
REUT381666:2:Tyes-255401582
RFEL315456:2:Tyes----0
RFER338969:1:Tyes----0
RLEG216596:6:Tyes0--1-
RMET266264:1:Tyes0----
RMET266264:2:Tyes-03117533
RPAL258594:0:Tyes014061493
RPAL316055:0:Tyes02910-839
RPAL316056:0:Tyes0508101914
RPAL316057:0:Tyes1634-1634-0
RPAL316058:0:Tyes640-640-0
RPOM246200:0:Tyes-0---
RPOM246200:1:Tyes3141--03119
RRUB269796:1:Tyes407--0-
RSAL288705:0:Tyes742---0
RSOL267608:0:Tyes0----
RSOL267608:1:Tyes-321240940
RSP101510:3:Fyes-47411156650
RSP357808:0:Tyes-0-3719-
RSPH272943:4:Tyes469-469-0
RSPH349101:2:Tno463-463-0
RSPH349102:5:Tyes0----
RXYL266117:0:Tyes-0---
SACI330779:0:Tyes-0---
SACI56780:0:Tyes0-0-2002
SAGA205921:0:Tno----0
SAGA208435:0:Tno----0
SAGA211110:0:Tyes----0
SALA317655:1:Tyes199501281-1025
SARE391037:0:Tyes----0
SAUR158878:1:Tno0---1930
SAUR158879:1:Tno0---1833
SAUR196620:0:Tno0---1901
SAUR273036:0:Tno0---1811
SAUR282458:0:Tno0---1937
SAUR282459:0:Tno0---1865
SAUR359786:1:Tno0---1909
SAUR359787:1:Tno0---1878
SAUR367830:3:Tno0---1767
SAUR418127:0:Tyes0---1920
SAUR426430:0:Tno0---1867
SAUR93061:0:Fno0---2122
SAUR93062:1:Tno0---1785
SAVE227882:1:Fyes967886651706516
SBAL399599:3:Tyes27582610120
SBAL402882:1:Tno26492510120
SBOY300268:1:Tyes28062590120
SCO:2:Fyes6572056736282967
SDEG203122:0:Tyes10102
SDEN318161:0:Tyes20011916120
SDYS300267:1:Tyes30132660102
SELO269084:0:Tyes-122437912750
SENT209261:0:Tno16501826102
SENT220341:0:Tno29533131120
SENT295319:0:Tno15491372102
SENT321314:2:Tno28792687120
SENT454169:2:Tno30072793120
SEPI176279:1:Tyes-0--2029
SEPI176280:0:Tno-155--0
SERY405948:0:Tyes529803474-3679
SFLE198214:0:Tyes28052596120
SFLE373384:0:Tno29912524120
SFUM335543:0:Tyes4071703187216630
SGLO343509:3:Tyes11451120
SHAE279808:0:Tyes2236---0
SHAL458817:0:Tyes40830230623052307
SHIGELLA:0:Tno29403139120
SLAC55218:0:Fyes----0
SLAC55218:1:Fyes362-0358-
SLOI323850:0:Tyes20501971120
SMED366394:2:Tyes-0---
SMED366394:3:Tyes221-2210-
SMEL266834:2:Tyes209--0-
SONE211586:1:Tyes19021855102
SPEA398579:0:Tno04056177117721770
SPRO399741:1:Tyes35533354120
SRUB309807:1:Tyes02256133-367
SSAP342451:2:Tyes0----
SSED425104:0:Tyes075276627652767
SSOL273057:0:Tyes-0---
SSON300269:1:Tyes28802648120
SSP1131:0:Tyes--411-0
SSP1148:0:Tyes--1519-0
SSP292414:2:Tyes0-04-
SSP321327:0:Tyes-0--1611
SSP387093:0:Tyes----0
SSP644076:5:Fyes---0-
SSP644076:6:Fyes9600---
SSP644076:7:Fyes----0
SSP64471:0:Tyes-01420-130
SSP84588:0:Tyes-470-303
SSP94122:1:Tyes16071513102
STHE292459:0:Tyes1084010841772-
STRO369723:0:Tyes-17761-0
STYP99287:1:Tyes28932695120
TACI273075:0:Tyes0-0--
TCRU317025:0:Tyes12130
TDEN243275:0:Tyes0-0--
TDEN292415:0:Tyes3592130
TELO197221:0:Tyes-50067713080
TERY203124:0:Tyes10-6152800
TKOD69014:0:Tyes0-0--
TLET416591:0:Tyes11960---
TPET390874:0:Tno----0
TPSE340099:0:Tyes0-0--
TROS309801:0:Tyes-0---
TSP1755:0:Tyes0-0--
TTEN273068:0:Tyes01310--
TTHE262724:1:Tyes988-988-0
TTHE300852:2:Tyes992-992-0
TTUR377629:0:Tyes12120
TVOL273116:0:Tyes0-0--
UMET351160:0:Tyes-0---
VCHO:0:Tyes-1621120
VCHO:1:Fyes0----
VCHO345073:0:Tno0----
VCHO345073:1:Tno-1626120
VEIS391735:1:Tyes-0---
VFIS312309:1:Tyes0-329328-
VFIS312309:2:Tyes-0---
VPAR223926:0:Tyes0----
VPAR223926:1:Tyes-0100410051003
VVUL196600:1:Tyes0----
VVUL196600:2:Tyes-0113411351133
VVUL216895:0:Tno0----
VVUL216895:1:Tno-0197519741976
WSUC273121:0:Tyes----0
XAUT78245:1:Tyes-29322696250
XAXO190486:0:Tyes6332405
XCAM190485:0:Tyes5562405
XCAM314565:0:Tno29032405
XCAM316273:0:Tno02949294729532946
XCAM487884:0:Tno30383506
XFAS160492:2:Tno13241323132420600
XFAS183190:1:Tyes5485475487240
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