CANDIDATE ID: 746

CANDIDATE ID: 746

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9896380e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- RUVB (ruvB) (b1860)
   Products of gene:
     - EG10924-MONOMER (branch migration of Holliday structures; repair helicase)
     - RUVABC-CPLX (resolvasome)
       Reactions:
        DNA combined with exogenous DNA to form a recombinational junction  =  resolution of recombinational junction formation of two intact strands

- RUVA (ruvA) (b1861)
   Products of gene:
     - EG10923-MONOMER (branch migration of Holliday structures; repair)
     - RUVABC-CPLX (resolvasome)
       Reactions:
        DNA combined with exogenous DNA to form a recombinational junction  =  resolution of recombinational junction formation of two intact strands

- EG11096 (yajC) (b0407)
   Products of gene:
     - EG11096-MONOMER (YajC)
     - SECD-SECF-YAJC-YIDC-CPLX (SecD-SecF-YajC-YidC Secretion Complex)
     - SEC-SECRETION-CPLX (Sec Protein Secretion Complex)

- EG10996 (tgt) (b0406)
   Products of gene:
     - EG10996-MONOMER (tRNA-guanine transglycosylase monomer)
     - CPLX0-1101 (tRNA-guanine transglycosylase)
       Reactions:
        guanine-34 of tRNA with a GU(N) anticodon + 7-aminomethyl-7-deazaguanine  =  tRNA with 7-aminomethyl-7-deazaguanine at position 34 + guanine

- EG10051 (apt) (b0469)
   Products of gene:
     - ADENPRIBOSYLTRAN-MONOMER (Apt)
     - ADENPRIBOSYLTRAN-CPLX (adenine phosphoribosyltransferase)
       Reactions:
        5-phospho-alpha-D-ribose 1-diphosphate + adenine  ->  diphosphate + AMP
         In pathways
         P121-PWY (P121-PWY)
         PWY-5043 (PWY-5043)
         SALVADEHYPOX-PWY (salvage pathways of adenine, hypoxanthine, and their nucleosides)
         P1-PWY (P1-PWY)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 347
Effective number of orgs (counting one per cluster within 468 clusters): 245

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
WSUC273121 ncbi Wolinella succinogenes DSM 17404
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79014
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP28240 Thermotoga sp.4
TSP1755 Thermoanaerobacter sp.5
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TPET390874 ncbi Thermotoga petrophila RKU-14
TMAR243274 ncbi Thermotoga maritima MSB84
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12514
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STRO369723 ncbi Salinispora tropica CNB-4404
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSUI391296 ncbi Streptococcus suis 98HAH334
SSUI391295 ncbi Streptococcus suis 05ZYH334
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B5
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153055
SPRO399741 ncbi Serratia proteamaculans 5685
SPNE488221 ncbi Streptococcus pneumoniae 705854
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-64
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-144
SPNE171101 ncbi Streptococcus pneumoniae R64
SPNE170187 ncbi Streptococcus pneumoniae G544
SPNE1313 Streptococcus pneumoniae4
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14355
SGOR29390 Streptococcus gordonii Challis4
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122285
SEPI176279 ncbi Staphylococcus epidermidis RP62A5
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAUR93062 ncbi Staphylococcus aureus aureus COL5
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83255
SAUR426430 ncbi Staphylococcus aureus aureus Newman5
SAUR418127 ncbi Staphylococcus aureus aureus Mu35
SAUR367830 Staphylococcus aureus aureus USA3005
SAUR359787 ncbi Staphylococcus aureus aureus JH15
SAUR359786 ncbi Staphylococcus aureus aureus JH95
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4765
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2525
SAUR273036 ncbi Staphylococcus aureus RF1225
SAUR196620 ncbi Staphylococcus aureus aureus MW25
SAUR158879 ncbi Staphylococcus aureus aureus N3155
SAUR158878 ncbi Staphylococcus aureus aureus Mu505
SARE391037 ncbi Salinispora arenicola CNS-2054
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PRUM264731 ncbi Prevotella ruminicola 234
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257454
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PGIN242619 ncbi Porphyromonas gingivalis W834
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2555
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16225
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSAK314315 ncbi Lactobacillus sakei sakei 23K5
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LLAC272623 ncbi Lactococcus lactis lactis Il14034
LLAC272622 ncbi Lactococcus lactis cremoris SK114
LJOH257314 ncbi Lactobacillus johnsonii NCC 5334
LINN272626 ncbi Listeria innocua Clip112625
LGAS324831 ncbi Lactobacillus gasseri ATCC 333234
LCHO395495 ncbi Leptothrix cholodnii SP-64
LBRE387344 ncbi Lactobacillus brevis ATCC 3675
LACI272621 ncbi Lactobacillus acidophilus NCFM4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GFOR411154 ncbi Gramella forsetii KT08034
GBET391165 ncbi Granulibacter bethesdensis CGDNIH15
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-005
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1985
FTUL393011 ncbi Francisella tularensis holarctica OSU185
FTUL351581 Francisella tularensis holarctica FSC2005
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255864
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B14
FMAG334413 ncbi Finegoldia magna ATCC 293284
FJOH376686 ncbi Flavobacterium johnsoniae UW1014
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25945
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5834
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSP255470 ncbi Dehalococcoides sp. CBDB14
DSP216389 ncbi Dehalococcoides sp. BAV14
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DRED349161 ncbi Desulfotomaculum reducens MI-15
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DETH243164 ncbi Dehalococcoides ethenogenes 1954
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CTET212717 ncbi Clostridium tetani E885
CTEP194439 ncbi Chlorobium tepidum TLS4
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPHY357809 ncbi Clostridium phytofermentans ISDg4
CPER289380 ncbi Clostridium perfringens SM1015
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CNOV386415 ncbi Clostridium novyi NT4
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334065
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3814
CDIF272563 ncbi Clostridium difficile 6305
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54824
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K165
BCIC186490 Candidatus Baumannia cicadellinicola4
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB505
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  RUVB   RUVA   EG11096   EG10996   EG10051   
YPSE349747 YPSIP31758_2030YPSIP31758_2031YPSIP31758_3122YPSIP31758_3123YPSIP31758_3060
YPSE273123 YPTB2041YPTB2040YPTB0929YPTB0928YPTB0991
YPES386656 YPDSF_1064YPDSF_1065YPDSF_2825YPDSF_2826YPDSF_2760
YPES377628 YPN_1535YPN_1534YPN_0897YPN_0896YPN_0965
YPES360102 YPA_1441YPA_1440YPA_2685YPA_2686YPA_2617
YPES349746 YPANGOLA_A2420YPANGOLA_A2421YPANGOLA_A3383YPANGOLA_A3384YPANGOLA_A2888
YPES214092 YPO2058YPO2057YPO3190YPO3191YPO3123
YPES187410 Y2252Y2253Y0992Y0991Y1059
YENT393305 YE2392YE2393YE3165YE3166YE3094
XORY360094 XOOORF_3306XOOORF_3308XOOORF_2116XOOORF_2115XOOORF_1995
XORY342109 XOO1547XOO1545XOO2351XOO2352
XORY291331 XOO1663XOO1661XOO2483XOO2484
XFAS405440 XFASM12_1063XFASM12_1061XFASM12_0192XFASM12_0191
XFAS183190 PD_0889PD_0887PD_0181PD_0180
XFAS160492 XF1902XF1904XF0224XF0223
XCAM487884 XCC-B100_1174XCC-B100_1171XCC-B100_1795XCC-B100_1794XCC-B100_1895
XCAM316273 XCAORF_3345XCAORF_3348XCAORF_2664XCAORF_2665XCAORF_2554
XCAM314565 XC_1136XC_1133XC_1737XC_1736XC_1832
XCAM190485 XCC3023XCC3025XCC2377XCC2378XCC2283
XAXO190486 XAC3147XAC3149XAC2512XAC2513XAC2391
XAUT78245 XAUT_3069XAUT_3067XAUT_4308XAUT_4271
WSUC273121 WS0440WS1249WS1519WS1350
VVUL216895 VV1_2159VV1_0444VV1_0445VV1_2002
VVUL196600 VV2284VV2285VV0747VV0746VV2412
VPAR223926 VP1052VP1051VP0589VP0588VP2180
VFIS312309 VF0952VF0951VF1968VF1969VF1688
VEIS391735 VEIS_4070VEIS_4068VEIS_4088VEIS_0596
VCHO345073 VC0395_A1436VC0395_A1437VC0395_A0271VC0395_A0270VC0395_A0571
VCHO VC1845VC1846VC0742VC0741VC1053
TTUR377629 TERTU_3434TERTU_3435TERTU_1736TERTU_2656
TTEN273068 TTE1180TTE1179TTE1184TTE1183TTE1194
TSP28240 TRQ2_0783TRQ2_0068TRQ2_1224TRQ2_1445
TSP1755 TETH514_1454TETH514_1453TETH514_1458TETH514_1457TETH514_1466
TPSE340099 TETH39_1014TETH39_1013TETH39_1018TETH39_1017TETH39_1027
TPET390874 TPET_0760TPET_0068TPET_1231TPET_1399
TMAR243274 TM_0165TM_0859TM_1561TM_1384
TDEN326298 TMDEN_1209TMDEN_1576TMDEN_0907TMDEN_1118
TDEN292415 TBD_2211TBD_2213TBD_2078TBD_2075
TCRU317025 TCR_0894TCR_0893TCR_1332TCR_1333
SWOL335541 SWOL_1431SWOL_1432SWOL_1427SWOL_1428
STYP99287 STM1894STM1895STM0406STM0405STM0483
STRO369723 STROP_1810STROP_1809STROP_1811STROP_1814
STHE292459 STH1161STH1160STH1168STH1166STH2438
SSUI391296 SSU98_0049SSU98_0061SSU98_1389SSU98_1323
SSUI391295 SSU05_0050SSU05_0060SSU05_1374SSU05_1307
SSP94122 SHEWANA3_1957SHEWANA3_1956SHEWANA3_1436SHEWANA3_1435SHEWANA3_2447
SSP644076 SCH4B_2536SCH4B_2537SCH4B_4456SCH4B_4094SCH4B_2484
SSP292414 TM1040_2371TM1040_2372TM1040_0995TM1040_0770TM1040_2325
SSON300269 SSO_1281SSO_1280SSO_0384SSO_0383SSO_0456
SSED425104 SSED_2034SSED_2033SSED_2891SSED_2892SSED_2853
SSAP342451 SSP1118SSP1117SSP1121SSP1120SSP1124
SPRO399741 SPRO_2776SPRO_2777SPRO_1062SPRO_1061SPRO_1134
SPNE488221 SP70585_0319SP70585_0242SP70585_2146SP70585_1618
SPNE487214 SPH_0376SPH_0282SPH_2213SPH_1691
SPNE487213 SPT_0306SPT_0216SPT_2053SPT_1517
SPNE171101 SPR0238SPR0165SPR1869SPR1435
SPNE170187 SPN08136SPN08036SPN20020SPN05374
SPNE1313 SPJ_0269SPJ_0196SPJ_2064SPJ_1483
SPEA398579 SPEA_2362SPEA_2363SPEA_1471SPEA_1470SPEA_1507
SONE211586 SO_2429SO_2430SO_3112SO_3113SO_2012
SMEL266834 SMC03965SMC03966SMC02058SMC01206SMC02698
SMED366394 SMED_2637SMED_2638SMED_1173SMED_1268SMED_2270
SLOI323850 SHEW_2075SHEW_2076SHEW_2336SHEW_2337SHEW_2236
SLAC55218 SL1157_0210SL1157_2448SL1157_3041SL1157_0153
SHAL458817 SHAL_1922SHAL_1921SHAL_1555SHAL_1554SHAL_1589
SHAE279808 SH1280SH1279SH1283SH1282SH1286
SGOR29390 SGO_0108SGO_2050SGO_0152SGO_1001
SGLO343509 SG1262SG1261SG0647SG0646SG0688
SFUM335543 SFUM_0993SFUM_0994SFUM_1240SFUM_0565
SFLE373384 SFV_1862SFV_1863SFV_0372SFV_0371SFV_0442
SFLE198214 AAN43427.1AAN43428.1AAN42002.1AAN42001.1AAN42069.1
SEPI176280 SE_1324SE_1325SE_1321SE_1322SE_1317
SEPI176279 SERP1205SERP1206SERP1202SERP1203SERP1198
SENT454169 SEHA_C2108SEHA_C2109SEHA_C0506SEHA_C0505SEHA_C0587
SENT321314 SCH_1902SCH_1903SCH_0448SCH_0447SCH_0524
SENT295319 SPA0975SPA0974SPA2317SPA2318SPA2239
SENT220341 STY2102STY2103STY0444STY0443STY0527
SENT209261 T0983T0982T2457T2458T2377
SELO269084 SYC0705_CSYC1802_CSYC1063_CSYC1650_D
SDYS300267 SDY_1147SDY_1148SDY_0327SDY_0328SDY_0450
SDEN318161 SDEN_1883SDEN_1884SDEN_1402SDEN_1401SDEN_2382
SDEG203122 SDE_2533SDE_2534SDE_1662SDE_1406
SBOY300268 SBO_1177SBO_1178SBO_0301SBO_0300SBO_0369
SBAL402882 SHEW185_2303SHEW185_2304SHEW185_2806SHEW185_2807SHEW185_2616
SBAL399599 SBAL195_2419SBAL195_2420SBAL195_2881SBAL195_2882SBAL195_2691
SAUR93062 SACOL1696SACOL1697SACOL1693SACOL1694SACOL1690
SAUR93061 SAOUHSC_01750SAOUHSC_01751SAOUHSC_01747SAOUHSC_01748SAOUHSC_01743
SAUR426430 NWMN_1543NWMN_1544NWMN_1540NWMN_1541NWMN_1537
SAUR418127 SAHV_1628SAHV_1629SAHV_1625SAHV_1626SAHV_1622
SAUR367830 SAUSA300_1597SAUSA300_1598SAUSA300_1594SAUSA300_1595SAUSA300_1591
SAUR359787 SAURJH1_1731SAURJH1_1732SAURJH1_1728SAURJH1_1729SAURJH1_1725
SAUR359786 SAURJH9_1698SAURJH9_1699SAURJH9_1695SAURJH9_1696SAURJH9_1692
SAUR282459 SAS1577SAS1578SAS1574SAS1575SAS1571
SAUR282458 SAR1721SAR1722SAR1718SAR1719SAR1715
SAUR273036 SAB1510CSAB1511CSAB1507CSAB1508CSAB1504C
SAUR196620 MW1591MW1592MW1588MW1589MW1585
SAUR158879 SA1467SA1468SA1464SA1465SA1461
SAUR158878 SAV1641SAV1642SAV1638SAV1639SAV1635
SARE391037 SARE_1800SARE_1799SARE_1801SARE_1804
SALA317655 SALA_0333SALA_1715SALA_2187SALA_1342
SACI56780 SYN_02971SYN_02972SYN_01523SYN_00038
RSPH349102 RSPH17025_1233RSPH17025_1231RSPH17025_0455RSPH17025_1156RSPH17025_0625
RSPH349101 RSPH17029_2205RSPH17029_0443RSPH17029_1495RSPH17029_0485
RSPH272943 RSP_0553RSP_1797RSP_2804RSP_1836
RSOL267608 RSC0500RSC0501RSC2714RSC2713RSC0417
RRUB269796 RRU_A1089RRU_A1765RRU_A0280RRU_A0607
RPOM246200 SPO_3115SPO_2322SPO_2616SPO_3066
RPAL316058 RPB_4269RPB_4271RPB_2733RPB_2869RPB_4317
RPAL316057 RPD_4167RPD_4169RPD_2778RPD_2603RPD_4212
RPAL316056 RPC_4803RPC_4805RPC_2777RPC_2592RPC_4387
RPAL316055 RPE_4767RPE_4769RPE_2908RPE_2771
RPAL258594 RPA1102RPA1100RPA2832RPA2606RPA4492
RMET266264 RMET_0423RMET_0424RMET_2945RMET_2944RMET_0311
RLEG216596 RL3990RL2054RL2407RL3483
RFER338969 RFER_0820RFER_0739RFER_3867RFER_0626RFER_4239
REUT381666 H16_A0497H16_A0498H16_A3114H16_A3113H16_A0395
REUT264198 REUT_A0483REUT_A0484REUT_A2809REUT_A2808REUT_A0363
RETL347834 RHE_CH03482RHE_CH03481RHE_CH01831RHE_CH02117RHE_CH03035
RDEN375451 RD1_2090RD1_2543RD1_2952RD1_2148
PTHE370438 PTH_1027PTH_1026PTH_1033PTH_1032
PSYR223283 PSPTO_3977PSPTO_3978PSPTO_1414PSPTO_1413PSPTO_1990
PSYR205918 PSYR_1410PSYR_1409PSYR_1229PSYR_1228PSYR_3426
PSTU379731 PST_2808PST_2809PST_3050PST_3051PST_1828
PSP56811 PSYCPRWF_1452PSYCPRWF_1424PSYCPRWF_0942PSYCPRWF_1927
PSP312153 PNUC_1880PNUC_1879PNUC_1790PNUC_1789
PSP296591 BPRO_4093BPRO_4094BPRO_4646BPRO_0466
PRUM264731 GFRORF2468GFRORF2041GFRORF0246GFRORF2478
PPUT76869 PPUTGB1_4201PPUTGB1_4202PPUTGB1_0877PPUTGB1_0876PPUTGB1_3831
PPUT351746 PPUT_1246PPUT_1245PPUT_0864PPUT_0863PPUT_1602
PPUT160488 PP_1217PP_1216PP_0834PP_0833PP_4266
PPRO298386 PBPRA1117PBPRA1116PBPRA0744PBPRA0743PBPRA1016
PPEN278197 PEPE_1271PEPE_1272PEPE_1269PEPE_1129
PNAP365044 PNAP_0512PNAP_0510PNAP_3886PNAP_0320
PMUL272843 PM0976PM0977PM0228PM0229PM0363
PMEN399739 PMEN_1272PMEN_1271PMEN_3519PMEN_3520PMEN_2616
PLUM243265 PLU2112PLU2111PLU3903PLU3904PLU3842
PING357804 PING_0719PING_0718PING_2213PING_2214PING_2278
PHAL326442 PSHAA1875PSHAA1876PSHAA0320PSHAA0319PSHAA1200
PGIN242619 PG_0488PG_0811PG_0485PG_0500
PFLU220664 PFL_4763PFL_4764PFL_4973PFL_4974PFL_1909
PFLU216595 PFLU4913PFLU4914PFLU5076PFLU5077PFLU4571
PFLU205922 PFL_4407PFL_4408PFL_4620PFL_4621PFL_1810
PENT384676 PSEEN4092PSEEN4093PSEEN1001PSEEN1000PSEEN1791
PCRY335284 PCRYO_0685PCRYO_0684PCRYO_1109PCRYO_1703
PCAR338963 PCAR_2338PCAR_2337PCAR_1893PCAR_1894PCAR_1431
PATL342610 PATL_2944PATL_2945PATL_1229PATL_1228PATL_2898
PARC259536 PSYC_0710PSYC_0709PSYC_1276PSYC_1524
PAER208964 PA0967PA0966PA3822PA3823PA1543
PAER208963 PA14_51780PA14_51790PA14_14610PA14_14600PA14_44500
OIHE221109 OB2036OB2037OB2032OB2033OB2025
OCAR504832 OCAR_7299OCAR_7301OCAR_6255OCAR_6226OCAR_6992
OANT439375 OANT_1213OANT_1212OANT_2337OANT_2176OANT_1626
NWIN323098 NWI_2724NWI_2725NWI_1770NWI_1795NWI_2613
NOCE323261 NOC_0140NOC_0139NOC_2351NOC_2352NOC_0169
NMUL323848 NMUL_A2719NMUL_A2720NMUL_A2429NMUL_A0935
NMEN374833 NMCC_1124NMCC_1880NMCC_0552NMCC_0678NMCC_1572
NMEN272831 NMC1144NMC0259NMC0549NMC0671NMC1580
NMEN122587 NMA1412NMA2221NMA0811NMA0928NMA1920
NMEN122586 NMB_1243NMB_0265NMB_0606NMB_0719NMB_1662
NHAM323097 NHAM_3521NHAM_3522NHAM_1798NHAM_1771NHAM_3237
NGON242231 NGO0760NGO1730NGO0188NGO0294NGO1311
NEUT335283 NEUT_0284NEUT_0283NEUT_1432NEUT_1431NEUT_0262
NEUR228410 NE0213NE0212NE1142NE1141NE0181
NARO279238 SARO_0423SARO_0422SARO_2074SARO_2247SARO_0675
MXAN246197 MXAN_4969MXAN_4972MXAN_4692MXAN_4693MXAN_5352
MSUC221988 MS0713MS0712MS1562MS1559MS0870
MSP409 M446_1104M446_0850M446_2490M446_5516M446_6008
MSP400668 MMWYL1_2190MMWYL1_2189MMWYL1_2646MMWYL1_2647MMWYL1_2232
MSP266779 MESO_3176MESO_3178MESO_1797MESO_1406MESO_2163
MPET420662 MPE_A0327MPE_A3236MPE_A0276MPE_A3733MPE_A3812
MMAR394221 MMAR10_2422MMAR10_1900MMAR10_1866MMAR10_0743
MMAG342108 AMB3216AMB3218AMB2515AMB0599AMB2849
MLOT266835 MLL3895MLL3898MLL1072MLL0721MLL2701
MFLA265072 MFLA_2344MFLA_2353MFLA_0513MFLA_0514MFLA_2383
MEXT419610 MEXT_4768MEXT_4229MEXT_3071MEXT_0600
MCAP243233 MCA_1223MCA_1222MCA_0682MCA_0681MCA_0816
MAQU351348 MAQU_1704MAQU_1705MAQU_1115MAQU_1114MAQU_2814
LWEL386043 LWE1545LWE1546LWE1542LWE1543LWE1537
LSAK314315 LSA0367LSA0366LSA0378LSA0377LSA1276
LMON265669 LMOF2365_1551LMOF2365_1552LMOF2365_1548LMOF2365_1549LMOF2365_1543
LMON169963 LMO1532LMO1533LMO1529LMO1530LMO1524
LLAC272623 L0267L0266L0361L22735
LLAC272622 LACR_2515LACR_2516LACR_0159LACR_0657
LJOH257314 LJ_0468LJ_0467LJ_0469LJ_1474
LINN272626 LIN1567LIN1568LIN1564LIN1565LIN1559
LGAS324831 LGAS_0415LGAS_0414LGAS_0416LGAS_0827
LCHO395495 LCHO_3954LCHO_3953LCHO_0343LCHO_1567
LBRE387344 LVIS_1230LVIS_1231LVIS_1227LVIS_1228LVIS_1376
LACI272621 LBA0411LBA0410LBA0412LBA1242
KPNE272620 GKPORF_B1537GKPORF_B1538GKPORF_B4686GKPORF_B4685GKPORF_B4783
JSP375286 MMA_0311MMA_0310MMA_0352MMA_0351
JSP290400 JANN_0966JANN_1083JANN_2520JANN_3212
ILOI283942 IL1085IL1086IL2149IL2205IL1850
HSOM228400 HSM_0143HSM_0142HSM_0303HSM_0302HSM_0362
HSOM205914 HS_0270HS_0269HS_1314HS_1315HS_1201
HMOD498761 HM1_1829HM1_1828HM1_1837HM1_1836
HINF71421 HI_0312HI_0313HI_0241HI_0244HI_1230
HINF374930 CGSHIEE_01495CGSHIEE_01490CGSHIEE_01870CGSHIEE_01855CGSHIEE_03885
HINF281310 NTHI0430NTHI0431NTHI0347NTHI0350NTHI1938
HHAL349124 HHAL_2213HHAL_2212HHAL_1697HHAL_1699
HDUC233412 HD_1757HD_1758HD_1751HD_1368HD_1818
HCHE349521 HCH_04922HCH_04923HCH_04468HCH_04469
HAUR316274 HAUR_2295HAUR_2516HAUR_0632HAUR_4379
HARS204773 HEAR0258HEAR0257HEAR0305HEAR0304
GURA351605 GURA_1413GURA_1414GURA_1717GURA_1716GURA_2616
GTHE420246 GTNG_2521GTNG_2522GTNG_2517GTNG_2518GTNG_2510
GSUL243231 GSU_1077GSU_1076GSU_2618GSU_2619GSU_1526
GOXY290633 GOX1682GOX1799GOX1439GOX0835
GMET269799 GMET_0746GMET_0745GMET_0853GMET_0852GMET_1422
GKAU235909 GK2591GK2592GK2586GK2587GK2579
GFOR411154 GFO_0168GFO_0181GFO_0596GFO_0464
GBET391165 GBCGDNIH1_1101GBCGDNIH1_1099GBCGDNIH1_1247GBCGDNIH1_0290GBCGDNIH1_0336
FTUL458234 FTA_1136FTA_0982FTA_0899FTA_0893FTA_1888
FTUL418136 FTW_0920FTW_1070FTW_1148FTW_1153FTW_0154
FTUL401614 FTN_0891FTN_1025FTN_1096FTN_1100FTN_1633
FTUL393115 FTF1013CFTF0658FTF1116CFTF1120CFTF0078
FTUL393011 FTH_1052FTH_0911FTH_0836FTH_0831FTH_1718
FTUL351581 FTL_1077FTL_0932FTL_0847FTL_0843FTL_1782
FPHI484022 FPHI_1721FPHI_1568FPHI_1512FPHI_1504FPHI_0975
FNUC190304 FN1217FN1335FN1481FN1483
FNOD381764 FNOD_0801FNOD_1339FNOD_0901FNOD_0873
FMAG334413 FMG_0815FMG_0812FMG_0813FMG_0397
FJOH376686 FJOH_1642FJOH_1652FJOH_0045FJOH_2974
ESP42895 ENT638_2429ENT638_2430ENT638_0876ENT638_0875ENT638_0949
ELIT314225 ELI_10425ELI_10440ELI_03590ELI_05605ELI_13650
EFER585054 EFER_1212EFER_1211EFER_2618EFER_2619EFER_2548
EFAE226185 EF_0067EF_0066EF_0896EF_1687
ECOL83334 ECS2570ECS2571ECS0458ECS0457ECS0522
ECOL585397 ECED1_2065ECED1_2066ECED1_0430ECED1_0429ECED1_0492
ECOL585057 ECIAI39_1189ECIAI39_1188ECIAI39_0274ECIAI39_0275ECIAI39_0202
ECOL585056 ECUMN_2158ECUMN_2159ECUMN_0445ECUMN_0444ECUMN_0508
ECOL585055 EC55989_2039EC55989_2040EC55989_0416EC55989_0415EC55989_0482
ECOL585035 ECS88_1917ECS88_1918ECS88_0402ECS88_0401ECS88_0466
ECOL585034 ECIAI1_1947ECIAI1_1948ECIAI1_0407ECIAI1_0406ECIAI1_0472
ECOL481805 ECOLC_1772ECOLC_1771ECOLC_3226ECOLC_3227ECOLC_3147
ECOL469008 ECBD_1778ECBD_1777ECBD_3254ECBD_3255ECBD_3187
ECOL439855 ECSMS35_1326ECSMS35_1325ECSMS35_0439ECSMS35_0438ECSMS35_0512
ECOL413997 ECB_01831ECB_01832ECB_00355ECB_00354ECB_00420
ECOL409438 ECSE_2036ECSE_2037ECSE_0428ECSE_0427ECSE_0494
ECOL405955 APECO1_910APECO1_911APECO1_1603APECO1_1604APECO1_1546
ECOL364106 UTI89_C2064UTI89_C2065UTI89_C0429UTI89_C0428UTI89_C0496
ECOL362663 ECP_1804ECP_1805ECP_0466ECP_0465ECP_0530
ECOL331111 ECE24377A_2090ECE24377A_2091ECE24377A_0437ECE24377A_0436ECE24377A_0506
ECOL316407 ECK1861:JW1849:B1860ECK1862:JW1850:B1861ECK0401:JW0397:B0407ECK0400:JW0396:B0406ECK0463:JW0458:B0469
ECOL199310 C2274C2275C0517C0516C0588
ECAR218491 ECA2491ECA2492ECA1121ECA1120ECA1175
DSP255470 CBDBA588CBDBA398CBDBA1339CBDBA68
DSP216389 DEHABAV1_0580DEHABAV1_0419DEHABAV1_1194DEHABAV1_0049
DSHI398580 DSHI_1105DSHI_1104DSHI_1860DSHI_2346DSHI_2074
DRED349161 DRED_1662DRED_1661DRED_1667DRED_1666DRED_0732
DNOD246195 DNO_1176DNO_1177DNO_0040DNO_0319
DHAF138119 DSY2466DSY2467DSY2462DSY2463DSY2452
DETH243164 DET_0606DET_0442DET_1384DET_0052
DDES207559 DDE_2322DDE_2323DDE_1817DDE_2844
DARO159087 DARO_4060DARO_4062DARO_3279DARO_3278
CVIO243365 CV_4215CV_4223CV_1346CV_1347CV_3772
CVES412965 COSY_0674COSY_0348COSY_0903COSY_0724
CTET212717 CTC_02211CTC_02212CTC_02208CTC_02209CTC_02200
CTEP194439 CT_0262CT_0065CT_1397CT_0293
CSP78 CAUL_0786CAUL_0785CAUL_3109CAUL_2191
CSP501479 CSE45_0158CSE45_0159CSE45_1506CSE45_2279CSE45_0987
CSAL290398 CSAL_1848CSAL_1847CSAL_2834CSAL_2833CSAL_2098
CPSY167879 CPS_2117CPS_2116CPS_1121CPS_1120CPS_3745
CPHY357809 CPHY_1334CPHY_1333CPHY_3437CPHY_0547
CPER289380 CPR_1914CPR_1915CPR_1911CPR_1912CPR_1905
CPER195103 CPF_2203CPF_2204CPF_2200CPF_2201CPF_2194
CPER195102 CPE1947CPE1948CPE1944CPE1945CPE1939
CNOV386415 NT01CX_1833NT01CX_1836NT01CX_1835NT01CX_1843
CJAP155077 CJA_1031CJA_1030CJA_1660CJA_1457
CHYD246194 CHY_1522CHY_1514CHY_1515CHY_2027
CHUT269798 CHU_0373CHU_0028CHU_2443CHU_1197CHU_2005
CHOM360107 CHAB381_0573CHAB381_0477CHAB381_1172CHAB381_1044
CDIF272563 CD2805CD2806CD2801CD2802CD2745
CDES477974 DAUD_1362DAUD_1363DAUD_1358DAUD_1359
CBOT536232 CLM_3475CLM_3476CLM_3472CLM_3473CLM_3465
CBOT515621 CLJ_B3335CLJ_B3336CLJ_B3332CLJ_B3333CLJ_B3325
CBOT498213 CLD_1470CLD_1469CLD_1473CLD_1472CLD_1480
CBOT441772 CLI_3129CLI_3130CLI_3126CLI_3127CLI_3119
CBOT441771 CLC_2972CLC_2973CLC_2969CLC_2970CLC_2962
CBOT441770 CLB_3099CLB_3100CLB_3096CLB_3097CLB_3089
CBOT36826 CBO3070CBO3071CBO3067CBO3068CBO3060
CBEI290402 CBEI_1531CBEI_1530CBEI_1534CBEI_1533CBEI_1539
BWEI315730 BCERKBAB4_4267BCERKBAB4_4268BCERKBAB4_4263BCERKBAB4_4264BCERKBAB4_4255
BVIE269482 BCEP1808_0653BCEP1808_0654BCEP1808_0682BCEP1808_0683BCEP1808_2889
BTHU412694 BALH_3999BALH_4000BALH_3996BALH_3997BALH_3989
BTHU281309 BT9727_4153BT9727_4154BT9727_4149BT9727_4150BT9727_4141
BTHE226186 BT_3285BT_1978BT_4592BT_3267
BTHA271848 BTH_I1247BTH_I1248BTH_I1277BTH_I1278BTH_I0493
BSUI470137 BSUIS_B1178BSUIS_B1179BSUIS_A0928BSUIS_A1138BSUIS_A1599
BSUI204722 BR_1702BR_1703BR_0890BR_1091BR_1540
BSUB BSU27730BSU27740BSU27700BSU27710BSU27610
BSP376 BRADO1147BRADO1145BRADO4036BRADO3990BRADO1992
BSP36773 BCEP18194_A3774BCEP18194_A3775BCEP18194_A3809BCEP18194_A3810BCEP18194_A6114
BPUM315750 BPUM_2415BPUM_2416BPUM_2411BPUM_2412BPUM_2402
BPSE320373 BURPS668_3366BURPS668_3365BURPS668_3329BURPS668_3328BURPS668_0588
BPSE320372 BURPS1710B_A3683BURPS1710B_A3682BURPS1710B_A3647BURPS1710B_A3645BURPS1710B_A0814
BPSE272560 BPSL2899BPSL2898BPSL2870BPSL2869BPSL0540
BPET94624 BPET0901BPET0904BPET3648BPET3647BPET0461
BPER257313 BP3421BP3418BP1047BP1049BP0264
BPAR257311 BPP3571BPP3568BPP1145BPP1146BPP4020
BOVI236 GBOORF1710GBOORF1711GBOORF0917GBOORF1091GBOORF1553
BMEL359391 BAB1_1714BAB1_1715BAB1_0909BAB1_1115BAB1_1556
BMEL224914 BMEI0334BMEI0333BMEI1077BMEI0890BMEI0476
BMAL320389 BMA10247_2532BMA10247_2533BMA10247_2572BMA10247_2573BMA10247_2949
BMAL320388 BMASAVP1_A0266BMASAVP1_A0267BMASAVP1_A0302BMASAVP1_A0303BMASAVP1_A0069
BMAL243160 BMA_2353BMA_2354BMA_2386BMA_2387
BLIC279010 BL01143BL01144BL01139BL01140BL01126
BJAP224911 BLR1537BLR1536BLL4736BLL4683BLR2490
BHAL272558 BH1224BH1229BH1228BH1241
BCLA66692 ABC1555ABC1554ABC1559ABC1558ABC1569
BCIC186490 BCI_0312BCI_0313BCI_0598BCI_0597
BCER572264 BCA_4531BCA_4532BCA_4527BCA_4528BCA_4519
BCER405917 BCE_4505BCE_4506BCE_4501BCE_4502BCE_4492
BCER315749 BCER98_3137BCER98_3138BCER98_3133BCER98_3134BCER98_3124
BCER288681 BCE33L4164BCE33L4165BCE33L4160BCE33L4161BCE33L4152
BCER226900 BC_4414BC_4415BC_4410BC_4411BC_4402
BCEN331272 BCEN2424_0688BCEN2424_0689BCEN2424_0721BCEN2424_0722BCEN2424_2784
BCEN331271 BCEN_0205BCEN_0206BCEN_0237BCEN_0238BCEN_2170
BCAN483179 BCAN_A1741BCAN_A1742BCAN_A0904BCAN_A1109BCAN_A1577
BBRO257310 BB4006BB4003BB1361BB1362BB4493
BANT592021 BAA_4667BAA_4668BAA_4663BAA_4664BAA_4655
BANT568206 BAMEG_4684BAMEG_4685BAMEG_4680BAMEG_4681BAMEG_4672
BANT261594 GBAA4650GBAA4651GBAA4646GBAA4647GBAA4638
BANT260799 BAS4315BAS4316BAS4311BAS4312BAS4303
BAMY326423 RBAM_024840RBAM_024850RBAM_024810RBAM_024820RBAM_024720
BAMB398577 BAMMC406_0607BAMMC406_0608BAMMC406_0636BAMMC406_0637BAMMC406_2702
BAMB339670 BAMB_0581BAMB_0582BAMB_0611BAMB_0612BAMB_2844
BABO262698 BRUAB1_1687BRUAB1_1688BRUAB1_0902BRUAB1_1097BRUAB1_1529
ASP76114 EBA3958EBA3959EBB40EBA1415
ASP62977 ACIAD2615ACIAD2614ACIAD0589ACIAD0590
ASP62928 AZO0601AZO0602AZO0905AZO0907
ASP232721 AJS_3694AJS_3700AJS_4006AJS_3870AJS_4134
ASAL382245 ASA_0736ASA_0735ASA_2623ASA_2624ASA_2089
APLE434271 APJL_0295APJL_1082APJL_0723APJL_0274
APLE416269 APL_0284APL_0283APL_1066APL_0723APL_0266
AORE350688 CLOS_1725CLOS_1726CLOS_1721CLOS_1722CLOS_1715
AMET293826 AMET_2339AMET_2338AMET_2343AMET_2342AMET_2352
AHYD196024 AHA_3647AHA_3648AHA_1736AHA_1735AHA_2210
AFER243159 AFE_2962AFE_2963AFE_1037AFE_1036
AEHR187272 MLG_2777MLG_2494MLG_1217MLG_1215
ADEH290397 ADEH_0952ADEH_2541ADEH_2542ADEH_0751
ACRY349163 ACRY_2904ACRY_2905ACRY_1182ACRY_1340ACRY_0401
ACAU438753 AZC_0519AZC_0515AZC_2895AZC_2307AZC_3496
ABOR393595 ABO_0753ABO_0752ABO_0502ABO_0501
ABAU360910 BAV2780BAV2778BAV0843BAV0844BAV3106
ABAC204669 ACID345_4544ACID345_4725ACID345_0145ACID345_0144ACID345_3608
AAVE397945 AAVE_4237AAVE_4240AAVE_4645AAVE_4479AAVE_4787


Organism features enriched in list (features available for 323 out of the 347 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.007446219
Arrangment:Clusters 0.00051831617
Arrangment:Filaments 0.0036323110
Arrangment:Pairs 1.291e-786112
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00139741111
Endospores:No 2.770e-1179211
Endospores:Yes 0.00010184253
GC_Content_Range4:0-40 5.709e-985213
GC_Content_Range4:40-60 0.0001092145224
GC_Content_Range4:60-100 0.003869293145
GC_Content_Range7:0-30 0.00014201447
GC_Content_Range7:30-40 0.000042771166
GC_Content_Range7:50-60 7.939e-679107
GC_Content_Range7:60-70 0.000148992134
GC_Content_Range7:70-100 0.0017502111
Genome_Size_Range5:0-2 8.814e-3126155
Genome_Size_Range5:4-6 9.941e-20151184
Genome_Size_Range9:0-1 5.765e-9127
Genome_Size_Range9:1-2 5.971e-2125128
Genome_Size_Range9:4-5 2.275e-87796
Genome_Size_Range9:5-6 6.729e-107488
Genome_Size_Range9:6-8 0.00118663038
Gram_Stain:Gram_Neg 1.356e-10222333
Habitat:Host-associated 0.000021191206
Habitat:Multiple 1.558e-9131178
Habitat:Specialized 0.00006591653
Habitat:Terrestrial 0.00183912531
Motility:No 0.000035363151
Motility:Yes 5.092e-9182267
Optimal_temp.:25-30 0.00017021819
Optimal_temp.:30-37 0.00029771718
Optimal_temp.:35-37 0.00041521313
Optimal_temp.:37 0.002024646106
Oxygen_Req:Facultative 2.910e-8142201
Shape:Irregular_coccus 0.0001916217
Shape:Rod 3.315e-18243347
Shape:Sphere 0.0000450219
Shape:Spiral 0.0000181734
Temp._range:Hyperthermophilic 0.0001407423
Temp._range:Mesophilic 0.0002787278473
Temp._range:Thermophilic 0.0001838935



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 142
Effective number of orgs (counting one per cluster within 468 clusters): 126

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278151
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP84588 ncbi Synechococcus sp. WH 81021
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S21
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DPSY177439 ncbi Desulfotalea psychrophila LSv541
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1351
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AMAR234826 ncbi Anaplasma marginale St. Maries1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  RUVB   RUVA   EG11096   EG10996   EG10051   
WPIP955 WD_0534
WPIP80849 WB_0355
UURE95667 UU488
UURE95664 UUR10_0545
UPAR505682 UPA3_0506
UMET351160 RCIX2629
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0306
TTHE262724 TT_C1676
TPEN368408
TPAL243276 TP_0543
TKOD69014
TACI273075
STOK273063
SSP84588 SYNW0814OR1685
SSP1148 SLL1430
SSP1131 SYNCC9605_1834
SSOL273057
SMAR399550
SACI330779
RSP101510
RSAL288705
PTOR263820
PMAR93060
PMAR74547 PMT0810
PMAR74546
PMAR59920 PMN2A_0268
PMAR167555 NATL1_09371
PMAR167546
PMAR167542
PMAR167540
PMAR167539 PRO_0754
PMAR146891
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747 PPA1164
PABY272844
OTSU357244 OTBS_1760
NSP35761 NOCA_2391
NSEN222891 NSE_0319
NPHA348780
NFAR247156 NFA36960
MVAN350058 MVAN_2575
MTUB419947 MRA_2621
MTUB336982 TBFG_12612
MTHE349307
MTHE187420
MTBRV RV2592C
MTBCDC MT2669
MSYN262723
MSTA339860
MSME246196 MSMEG_2945
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_0227
MMAR426368 MMARC7_1686
MMAR402880 MMARC5_0915
MMAR368407
MMAR267377 MMP0660
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0891
MGIL350054 MFLV_3824
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
MABS561007 MAB_2882C
LXYL281090
LBIF456481 LEPBI_II0127
LBIF355278 LBF_4124
KRAD266940 KRAD_3054
IHOS453591
HWAL362976
HSP64091
HSAL478009
HMUK485914
HMAR272569
HBUT415426
FSP1855 FRANEAN1_5140
FSP106370 FRANCCI3_1375
FALN326424 FRAAL2146
ERUM302409 ERGA_CDS_08130
ERUM254945 ERWE_CDS_08220
ECHA205920 ECH_1008
ECAN269484 ECAJ_0814
DPSY177439 DP0909
CTRA471473 CTLON_0758
CTRA471472 CTL0763
CSUL444179
CRUT413404 RMAG_1007
CPRO264201 PC0020
CPNE182082 CPB0646
CPNE138677 CPJ0620
CPNE115713 CPN0620
CPNE115711 CP_0127
CMUR243161 TC_0788
CMIC443906
CMIC31964
CMET456442 MBOO_0112
CMAQ397948
CKOR374847
CFEL264202 CF0886
CEFF196164 CE1774
CDIP257309 DIP1376
CCAV227941 CCA_00120
CABO218497 CAB119
BXEN266265
BTUR314724 BT0651
BHER314723 BH0651
BGAR290434 BG0674
BBUR224326 BB_0651
BAPH372461
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667
APHA212042 APH_1090
APER272557
ANAE240017 ANA_0861
AMAR234826 AM1012
AFUL224325
AAUR290340


Organism features enriched in list (features available for 130 out of the 142 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.004554669
Arrangment:Chains 4.483e-8392
Arrangment:Pairs 0.000101811112
Disease:Pharyngitis 5.149e-688
Disease:bronchitis_and_pneumonitis 5.149e-688
Endospores:No 5.455e-1179211
Endospores:Yes 0.0000129153
GC_Content_Range7:0-30 4.402e-62447
Genome_Size_Range5:0-2 3.337e-1875155
Genome_Size_Range5:4-6 9.636e-1113184
Genome_Size_Range9:0-1 2.877e-112227
Genome_Size_Range9:1-2 1.392e-853128
Genome_Size_Range9:4-5 0.0000689896
Genome_Size_Range9:5-6 5.389e-6588
Gram_Stain:Gram_Neg 2.797e-945333
Gram_Stain:Gram_Pos 0.002725422150
Habitat:Aquatic 0.00088113291
Habitat:Multiple 1.011e-815178
Habitat:Specialized 0.00051882253
Motility:No 0.002034546151
Motility:Yes 0.000160342267
Optimal_temp.:37 0.003350034106
Optimal_temp.:85 0.002384244
Oxygen_Req:Anaerobic 0.001695634102
Oxygen_Req:Facultative 1.207e-721201
Pathogenic_in:Human 0.004762536213
Salinity:Extreme_halophilic 0.006689557
Shape:Irregular_coccus 7.503e-91517
Shape:Oval 0.009327045
Shape:Rod 7.732e-1342347
Shape:Sphere 8.670e-91619
Temp._range:Hyperthermophilic 9.310e-81723
Temp._range:Mesophilic 0.000030789473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491470.4849
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951780.4835
GLYCOCAT-PWY (glycogen degradation I)2462100.4824
PWY-6317 (galactose degradation I (Leloir pathway))4643230.4785
P163-PWY (lysine fermentation to acetate and butyrate)3672750.4636
PWY-5386 (methylglyoxal degradation I)3052410.4597
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4583170.4533
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081820.4532
PWY-5918 (heme biosynthesis I)2722210.4528
TYRFUMCAT-PWY (tyrosine degradation I)1841650.4428
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181860.4375
ARO-PWY (chorismate biosynthesis I)5103360.4356
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))5053340.4348
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251890.4284
THISYN-PWY (thiamin biosynthesis I)5023320.4280
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862250.4260
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002320.4197
FERMENTATION-PWY (mixed acid fermentation)5123340.4123
PWY0-381 (glycerol degradation I)4172920.4103
PWY-5686 (uridine-5'-phosphate biosynthesis)5263390.4102
METSYN-PWY (homoserine and methionine biosynthesis)3972820.4091
SERDEG-PWY (L-serine degradation)3492570.4076
PPGPPMET-PWY (ppGpp biosynthesis)4843220.4069
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831590.4049
PWY-841 (purine nucleotides de novo biosynthesis II)4983270.4004



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  RUVA   EG11096   EG10996   EG10051   
RUVB0.9999870.9989490.9989170.998734
RUVA0.9987210.9986160.998606
EG110960.9999340.998569
EG109960.998605
EG10051



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PAIRWISE BLAST SCORES:

  RUVB   RUVA   EG11096   EG10996   EG10051   
RUVB0.0f0----
RUVA-0.0f0---
EG11096--0.0f0--
EG10996---0.0f0-
EG10051----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- RUVABC-CPLX (resolvasome) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.400, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9992 0.9986 RUVA (ruvA) EG10923-MONOMER (branch migration of Holliday structures; repair)
   *in cand* 0.9993 0.9987 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)
             0.9901 0.9712 EG10925 (ruvC) EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9989 0.9986 EG10051 (apt) ADENPRIBOSYLTRAN-MONOMER (Apt)
   *in cand* 0.9992 0.9986 EG10996 (tgt) EG10996-MONOMER (tRNA-guanine transglycosylase monomer)
   *in cand* 0.9992 0.9986 EG11096 (yajC) EG11096-MONOMER (YajC)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10996 EG11096 (centered at EG11096)
EG10051 (centered at EG10051)
RUVA RUVB (centered at RUVA)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  RUVB   RUVA   EG11096   EG10996   EG10051   
415/623411/623415/623406/623401/623
AAEO224324:0:Tyes--037-
AAVE397945:0:Tyes03403241541
ABAC204669:0:Tyes44424627103491
ABAU360910:0:Tyes19381936012267
ABOR393595:0:Tyes25425310-
ABUT367737:0:Tyes-3480-303
ACAU438753:0:Tyes40241218183016
ACEL351607:0:Tyes45--0
ACRY349163:8:Tyes251525167799380
ADEH290397:0:Tyes-202180618070
AEHR187272:0:Tyes1553127020-
AFER243159:0:Tyes1901190210-
AHYD196024:0:Tyes1833183410464
ALAI441768:0:Tyes---0121
AMAR234826:0:Tyes--0--
AMAR329726:9:Tyes18580--62
AMET293826:0:Tyes105414
ANAE240017:0:Tyes-0---
AORE350688:0:Tyes1011670
APHA212042:0:Tyes--0--
APLE416269:0:Tyes18177954520
APLE434271:0:Tno15-7764180
ASAL382245:5:Tyes10181418151304
ASP232721:2:Tyes06321178447
ASP62928:0:Tyes01310312-
ASP62977:0:Tyes1901190001-
ASP76114:2:Tyes1488148910-
AVAR240292:3:Tyes01818--1464
BABO262698:1:Tno7617620179605
BAMB339670:3:Tno0130312316
BAMB398577:3:Tno0129302123
BAMY326423:0:Tyes12139100
BANT260799:0:Tno1213890
BANT261594:2:Tno1213890
BANT568206:2:Tyes1213890
BANT592021:2:Tno1213890
BAPH198804:0:Tyes--10-
BBAC264462:0:Tyes-22701-
BBAC360095:0:Tyes0-352553-
BBRO257310:0:Tyes26722669013169
BBUR224326:21:Fno--0--
BCAN483179:1:Tno8078080200650
BCEN331271:2:Tno0132331990
BCEN331272:3:Tyes0133342093
BCER226900:1:Tyes1213890
BCER288681:0:Tno1213890
BCER315749:1:Tyes1213890
BCER405917:1:Tyes13149100
BCER572264:1:Tno1213890
BCIC186490:0:Tyes01266265-
BCLA66692:0:Tyes105415
BFRA272559:1:Tyes163285--0
BFRA295405:0:Tno643638--0
BGAR290434:2:Fyes--0--
BHAL272558:0:Tyes-05417
BHEN283166:0:Tyes832-0411-
BHER314723:0:Fyes--0--
BJAP224911:0:Fyes1032133160958
BLIC279010:0:Tyes1213890
BLON206672:0:Tyes-0--3
BMAL243160:1:Tno012829-
BMAL320388:1:Tno1941952302310
BMAL320389:1:Tyes014041410
BMEL224914:1:Tno10769574154
BMEL359391:1:Tno7307310174588
BOVI236:1:Tyes6696700149533
BPAR257311:0:Tno23032300012747
BPER257313:0:Tyes284728446966980
BPET94624:0:Tyes449452322932280
BPSE272560:1:Tyes23742373234523440
BPSE320372:1:Tno27452744271027080
BPSE320373:1:Tno26752674263826370
BPUM315750:0:Tyes1213890
BQUI283165:0:Tyes600-0--
BSP107806:2:Tyes--10-
BSP36773:2:Tyes0135362382
BSP376:0:Tyes2027462700803
BSUB:0:Tyes13149100
BSUI204722:1:Tyes7867870195633
BSUI470137:0:Tno01---
BSUI470137:1:Tno--0205649
BTHA271848:1:Tno7457467757760
BTHE226186:0:Tyes133302657-1315
BTHU281309:1:Tno1213890
BTHU412694:1:Tno1011780
BTRI382640:1:Tyes1126-0535-
BTUR314724:0:Fyes--0--
BVIE269482:7:Tyes0129302215
BWEI315730:4:Tyes1213890
CABO218497:0:Tyes-0---
CACE272562:1:Tyes9--70
CAULO:0:Tyes1671-4080-
CBEI290402:0:Tyes10439
CBLO203907:0:Tyes--1069
CBLO291272:0:Tno--1072
CBOT36826:1:Tno1011780
CBOT441770:0:Tyes1011780
CBOT441771:0:Tno1011780
CBOT441772:1:Tno1011780
CBOT498213:1:Tno1011780
CBOT508765:1:Tyes0--27
CBOT515621:2:Tyes1011780
CBOT536232:0:Tno1011780
CBUR227377:1:Tyes4124100--
CBUR360115:1:Tno4394370--
CBUR434922:2:Tno02781--
CCAV227941:1:Tyes-0---
CCHL340177:0:Tyes-3560-465
CCON360104:2:Tyes-475624-0
CCUR360105:0:Tyes-294626-0
CDES477974:0:Tyes4501-
CDIF272563:1:Tyes616257580
CDIP257309:0:Tyes-0---
CEFF196164:0:Fyes-0---
CFEL264202:1:Tyes-0---
CFET360106:0:Tyes--0-440
CGLU196627:0:Tyes01---
CHOM360107:1:Tyes-960684556
CHUT269798:0:Tyes3410237811501951
CHYD246194:0:Tyes8-01500
CJAP155077:0:Tyes10615418-
CJEI306537:0:Tyes01---
CJEJ192222:0:Tyes--171-0
CJEJ195099:0:Tno--222-0
CJEJ354242:2:Tyes--169-0
CJEJ360109:0:Tyes--0-243
CJEJ407148:0:Tno--180-0
CKLU431943:1:Tyes12--100
CMET456442:0:Tyes-0---
CMUR243161:1:Tyes-0---
CNOV386415:0:Tyes0-3210
CPEL335992:0:Tyes--09242
CPER195102:1:Tyes89560
CPER195103:0:Tno910670
CPER289380:3:Tyes910670
CPHY357809:0:Tyes7807792862-0
CPNE115711:1:Tyes-0---
CPNE115713:0:Tno-0---
CPNE138677:0:Tno-0---
CPNE182082:0:Tno-0---
CPRO264201:0:Fyes-0---
CPSY167879:0:Tyes981980102550
CRUT413404:0:Tyes--0--
CSAL290398:0:Tyes101000999257
CSP501479:8:Fyes0113302089818
CSP78:2:Tyes1023461416-
CTEP194439:0:Tyes-19601312227
CTET212717:0:Tyes910670
CTRA471472:0:Tyes-0---
CTRA471473:0:Tno-0---
CVES412965:0:Tyes3130534363-
CVIO243365:0:Tyes29482956012485
DARO159087:0:Tyes78178310-
DDES207559:0:Tyes51351401042-
DETH243164:0:Tyes54137912860-
DGEO319795:1:Tyes-395-0-
DHAF138119:0:Tyes141510110
DNOD246195:0:Tyes109610970267-
DOLE96561:0:Tyes--238602565
DPSY177439:2:Tyes--0--
DRAD243230:3:Tyes-0-1275-
DRED349161:0:Tyes9329319379360
DSHI398580:5:Tyes107691261986
DSP216389:0:Tyes53337111690-
DSP255470:0:Tno44528310950-
DVUL882:1:Tyes1520-10910-
ECAN269484:0:Tyes--0--
ECAR218491:0:Tyes137713781056
ECHA205920:0:Tyes--0--
ECOL199310:0:Tno171517161072
ECOL316407:0:Tno147214731063
ECOL331111:6:Tno159115921070
ECOL362663:0:Tno133113321063
ECOL364106:1:Tno163516361068
ECOL405955:2:Tyes137013711059
ECOL409438:6:Tyes163116321067
ECOL413997:0:Tno147014711066
ECOL439855:4:Tno8538521074
ECOL469008:0:Tno10144814491381
ECOL481805:0:Tno10145514561377
ECOL585034:0:Tno152615271068
ECOL585035:0:Tno146314641066
ECOL585055:0:Tno161816191066
ECOL585056:2:Tno171917201066
ECOL585057:0:Tno1002100171720
ECOL585397:0:Tno158215831065
ECOL83334:0:Tno215521561066
ECOLI:0:Tno149414951064
ECOO157:0:Tno--1066
EFAE226185:3:Tyes10-7651529
EFER585054:1:Tyes10140114021329
ELIT314225:0:Tyes1386138904122039
ERUM254945:0:Tyes--0--
ERUM302409:0:Tno--0--
ESP42895:1:Tyes156115621075
FALN326424:0:Tyes----0
FJOH376686:0:Tyes16181628-02972
FMAG334413:1:Tyes451-4484490
FNOD381764:0:Tyes-056210880
FNUC190304:0:Tyes0-118264266
FPHI484022:1:Tyes7726205635550
FRANT:0:Tno--9659690
FSP106370:0:Tyes----0
FSP1855:0:Tyes----0
FSUC59374:0:Tyes-2871--0
FTUL351581:0:Tno2088040837
FTUL393011:0:Tno1836430729
FTUL393115:0:Tyes8625309549580
FTUL401614:0:Tyes0133203207736
FTUL418136:0:Tno6587838518560
FTUL458234:0:Tno1877240750
GBET391165:0:Tyes811809957046
GFOR411154:0:Tyes013-428296
GKAU235909:1:Tyes1213780
GMET269799:1:Tyes10108107678
GOXY290633:5:Tyes838-9555980
GSUL243231:0:Tyes1015361537447
GTHE420246:1:Tyes1112780
GURA351605:0:Tyes012992981197
GVIO251221:0:Tyes-138--0
HACI382638:1:Tyes-8820-1057
HARS204773:0:Tyes104645-
HAUR316274:2:Tyes16771897-03780
HCHE349521:0:Tyes45345401-
HDUC233412:0:Tyes3363373300393
HHAL349124:0:Tyes52552402-
HHEP235279:0:Tyes--278-0
HINF281310:0:Tyes7677031427
HINF374930:0:Tyes106966415
HINF71421:0:Tno676803967
HMOD498761:0:Tyes1098-
HNEP81032:0:Tyes0-1753970-
HPY:0:Tno-306987-0
HPYL357544:1:Tyes-314973-0
HPYL85963:0:Tno-292920-0
HSOM205914:1:Tyes1010491050936
HSOM228400:0:Tno10164163222
ILOI283942:0:Tyes0110871144780
JSP290400:1:Tyes0-11715732273
JSP375286:0:Tyes104241-
KPNE272620:2:Tyes01306430633161
KRAD266940:2:Fyes-0---
LACI272621:0:Tyes102-818
LBIF355278:1:Tyes----0
LBIF456481:1:Tno----0
LBOR355276:0:Tyes----0
LBOR355276:1:Tyes--0--
LBOR355277:0:Tno----0
LBOR355277:1:Tno--0--
LBRE387344:2:Tyes3401141
LCAS321967:1:Tyes0--2767
LCHO395495:0:Tyes3640363901229-
LDEL321956:0:Tyes234235--0
LDEL390333:0:Tyes235236--0
LGAS324831:0:Tyes102-399
LHEL405566:0:Tyes-0--745
LINN272626:1:Tno89560
LINT189518:0:Tyes----0
LINT189518:1:Tyes--0--
LINT267671:0:Tno----0
LINT267671:1:Tno--0--
LINT363253:3:Tyes1135-0876-
LJOH257314:0:Tyes102-796
LLAC272622:5:Tyes22192220-0470
LLAC272623:0:Tyes20542055-0481
LMES203120:1:Tyes---01067
LMON169963:0:Tno89560
LMON265669:0:Tyes89560
LPLA220668:0:Tyes--1891900
LPNE272624:0:Tno2880713--
LPNE297245:1:Fno1960726--
LPNE297246:1:Fyes2840736--
LPNE400673:0:Tno2830757--
LREU557436:0:Tyes103--
LSAK314315:0:Tyes101211946
LSPH444177:1:Tyes-21-180
LWEL386043:0:Tyes89560
MABS561007:1:Tyes0----
MAER449447:0:Tyes43030--3060
MAQU351348:2:Tyes582583101683
MAVI243243:0:Tyes01---
MBOV233413:0:Tno01---
MBOV410289:0:Tno01---
MCAP243233:0:Tyes49749610124
MEXT419610:0:Tyes4180-363624870
MFLA265072:0:Tyes18281837011865
MGIL350054:3:Tyes0----
MHUN323259:0:Tyes-0---
MLEP272631:0:Tyes10---
MLOT266835:2:Tyes2463246427401520
MMAG342108:0:Tyes26172619191602250
MMAR267377:0:Tyes----0
MMAR394221:0:Tyes1678-115611220
MMAR402880:1:Tyes----0
MMAR426368:0:Tyes----0
MMAR444158:0:Tyes----0
MPET420662:1:Tyes512953034503529
MSME246196:0:Tyes0----
MSP164756:1:Tno10---
MSP164757:0:Tno10---
MSP189918:2:Tyes10---
MSP266779:3:Tyes177417763960767
MSP400668:0:Tyes1048648746
MSP409:2:Tyes2320154744874945
MSUC221988:0:Tyes10877874171
MTBCDC:0:Tno0----
MTBRV:0:Tno0----
MTHE264732:0:Tyes7-01-
MTUB336982:0:Tno0----
MTUB419947:0:Tyes0----
MVAN350058:0:Tyes0----
MXAN246197:0:Tyes26426701638
NARO279238:0:Tyes1016751849255
NEUR228410:0:Tyes32319759740
NEUT335283:2:Tyes2221115111500
NFAR247156:2:Tyes-0---
NGON242231:0:Tyes53214080991020
NHAM323097:2:Tyes169616972901413
NMEN122586:0:Tno94403294401345
NMEN122587:0:Tyes555135001051053
NMEN272831:0:Tno79402633781155
NMEN374833:0:Tno566131001251008
NMUL323848:3:Tyes17681769-14800
NOCE323261:1:Tyes102174217531
NSEN222891:0:Tyes--0--
NSP103690:6:Tyes25430--4247
NSP35761:1:Tyes----0
NSP387092:0:Tyes-392766-0
NWIN323098:0:Tyes963964027851
OANT439375:5:Tyes101158994432
OCAR504832:0:Tyes10691071280763
OIHE221109:0:Tyes1112780
OTSU357244:0:Fyes--0--
PACN267747:0:Tyes----0
PAER208963:0:Tyes30233024102424
PAER208964:0:Tno1028842885579
PARC259536:0:Tyes10566816-
PATL342610:0:Tyes17341735101679
PCAR338963:0:Tyes9179164724730
PCRY335284:1:Tyes104231013-
PDIS435591:0:Tyes-187510760-
PENT384676:0:Tyes2900290110744
PFLU205922:0:Tyes26292630284228430
PFLU216595:1:Tyes3233244834840
PFLU220664:0:Tyes28132814302230230
PGIN242619:0:Tyes3292015-
PHAL326442:1:Tyes1590159110906
PING357804:0:Tyes10138813891453
PINT246198:1:Tyes0-7741175-
PLUM243265:0:Fyes10179417951733
PLUT319225:0:Tyes-15650-1534
PMAR167539:0:Tyes-0---
PMAR167555:0:Tyes-0---
PMAR59920:0:Tno-0---
PMAR74547:0:Tyes----0
PMEN399739:0:Tyes10227522761364
PMOB403833:0:Tyes--53-0
PMUL272843:1:Tyes74874901135
PNAP365044:8:Tyes19619435940-
PPEN278197:0:Tyes129130-1270
PPRO298386:2:Tyes37437310273
PPUT160488:0:Tno383382103425
PPUT351746:0:Tyes39038910750
PPUT76869:0:Tno33523353102976
PRUM264731:0:Tyes216517540-2175
PSP117:0:Tyes---02262
PSP296591:2:Tyes3596359741490-
PSP312153:0:Tyes919010-
PSP56811:2:Tyes5094810997-
PSTU379731:0:Tyes972973121412150
PSYR205918:0:Tyes184183102208
PSYR223283:2:Tyes2531253210575
PTHE370438:0:Tyes1076-
RAKA293614:0:Fyes--0185-
RALB246199:0:Tyes30---
RBEL336407:0:Tyes--0573-
RBEL391896:0:Fno--6810-
RCAN293613:0:Fyes--0557-
RCAS383372:0:Tyes2676751--0
RCON272944:0:Tno--0210-
RDEN375451:4:Tyes0-41679652
RETL347834:5:Tyes1630162902841189
REUT264198:3:Tyes121122246724660
REUT381666:2:Tyes102103264426430
RFEL315456:2:Tyes--7870-
RFER338969:1:Tyes194113324103613
RLEG216596:6:Tyes1932-03521420
RMAS416276:1:Tyes--0147-
RMET266264:2:Tyes112113262126200
RPAL258594:0:Tyes20173815093415
RPAL316055:0:Tyes197819801370-
RPAL316056:0:Tyes2219222118501799
RPAL316057:0:Tyes1578158017601621
RPAL316058:0:Tyes1539154101371586
RPOM246200:1:Tyes774-0281725
RPRO272947:0:Tyes--0128-
RRIC392021:0:Fno--0200-
RRIC452659:0:Tyes--0197-
RRUB269796:1:Tyes805-14800326
RSOL267608:1:Tyes8384234223410
RSP357808:0:Tyes16753012--0
RSPH272943:4:Tyes1809-0108141
RSPH349101:2:Tno1772-0105842
RSPH349102:5:Tyes7737710696170
RTYP257363:0:Tno--0132-
RXYL266117:0:Tyes-0-7108
SACI56780:0:Tyes1014911490-
SAGA205921:0:Tno0--3421133
SAGA208435:0:Tno0--3451134
SAGA211110:0:Tyes0--4251263
SALA317655:1:Tyes0-139818761016
SARE391037:0:Tyes102-5
SAUR158878:1:Tno67340
SAUR158879:1:Tno67340
SAUR196620:0:Tno67340
SAUR273036:0:Tno67340
SAUR282458:0:Tno67340
SAUR282459:0:Tno67340
SAUR359786:1:Tno67340
SAUR359787:1:Tno67340
SAUR367830:3:Tno67340
SAUR418127:0:Tyes67340
SAUR426430:0:Tno67340
SAUR93061:0:Fno67340
SAUR93062:1:Tno67340
SAVE227882:1:Fyes0---4
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