CANDIDATE ID: 749

CANDIDATE ID: 749

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9917940e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G6475 (ycbL) (b0927)
   Products of gene:
     - G6475-MONOMER (predicted metal-binding enzyme)

- EG10966 (spoT) (b3650)
   Products of gene:
     - SPOT-MONOMER (guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase [multifunctional])
       Reactions:
        pppGpp + H2O  ->  GTP + diphosphate + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)
        ATP + GDP  ->  AMP + ppGpp + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)
        ppGpp + H2O  ->  diphosphate + GDP + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)

- EG10835 (relA) (b2784)
   Products of gene:
     - RELA-MONOMER (GDP pyrophosphokinase / GTP pyrophosphokinase)
       Reactions:
        ATP + GDP  ->  AMP + ppGpp + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)
        GTP + ATP  ->  pppGpp + AMP + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)

- EG10097 (aspS) (b1866)
   Products of gene:
     - ASPS-MONOMER (aspartyl-tRNA synthetase)
     - ASPS-CPLX (aspartyl-tRNA synthetase)
       Reactions:
        tRNAasp + L-aspartate + ATP  ->  L-aspartyl-tRNAasp + diphosphate + AMP
         In pathways
         TRNA-CHARGING-PWY (tRNA charging pathway)

- EG10051 (apt) (b0469)
   Products of gene:
     - ADENPRIBOSYLTRAN-MONOMER (Apt)
     - ADENPRIBOSYLTRAN-CPLX (adenine phosphoribosyltransferase)
       Reactions:
        5-phospho-alpha-D-ribose 1-diphosphate + adenine  ->  diphosphate + AMP
         In pathways
         P121-PWY (P121-PWY)
         PWY-5043 (PWY-5043)
         SALVADEHYPOX-PWY (salvage pathways of adenine, hypoxanthine, and their nucleosides)
         P1-PWY (P1-PWY)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 332
Effective number of orgs (counting one per cluster within 468 clusters): 223

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79014
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TFUS269800 ncbi Thermobifida fusca YX5
TERY203124 ncbi Trichodesmium erythraeum IMS1014
TELO197221 ncbi Thermosynechococcus elongatus BP-14
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STRO369723 ncbi Salinispora tropica CNB-4405
STHE322159 ncbi Streptococcus thermophilus LMD-95
STHE299768 ncbi Streptococcus thermophilus CNRZ10665
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
STHE264199 ncbi Streptococcus thermophilus LMG 183115
SSUI391296 ncbi Streptococcus suis 98HAH335
SSUI391295 ncbi Streptococcus suis 05ZYH335
SSP94122 ncbi Shewanella sp. ANA-35
SSP84588 ncbi Synechococcus sp. WH 81024
SSP64471 ncbi Synechococcus sp. CC93114
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP1148 ncbi Synechocystis sp. PCC 68035
SSP1131 Synechococcus sp. CC96054
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153055
SPYO370554 ncbi Streptococcus pyogenes MGAS107504
SPYO370553 ncbi Streptococcus pyogenes MGAS20964
SPYO370552 ncbi Streptococcus pyogenes MGAS102704
SPYO370551 ncbi Streptococcus pyogenes MGAS94294
SPYO319701 ncbi Streptococcus pyogenes MGAS61804
SPYO293653 ncbi Streptococcus pyogenes MGAS50054
SPYO286636 ncbi Streptococcus pyogenes MGAS103944
SPYO198466 ncbi Streptococcus pyogenes MGAS3154
SPYO193567 ncbi Streptococcus pyogenes SSI-14
SPYO186103 ncbi Streptococcus pyogenes MGAS82324
SPYO160490 ncbi Streptococcus pyogenes M1 GAS4
SPRO399741 ncbi Serratia proteamaculans 5685
SPNE488221 ncbi Streptococcus pneumoniae 705855
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-65
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-145
SPNE171101 ncbi Streptococcus pneumoniae R64
SPNE170187 ncbi Streptococcus pneumoniae G545
SPNE1313 Streptococcus pneumoniae5
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMUT210007 ncbi Streptococcus mutans UA1595
SLOI323850 ncbi Shewanella loihica PV-45
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14355
SGOR29390 Streptococcus gordonii Challis5
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122285
SEPI176279 ncbi Staphylococcus epidermidis RP62A5
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63015
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SAUR93062 ncbi Staphylococcus aureus aureus COL5
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83255
SAUR426430 ncbi Staphylococcus aureus aureus Newman5
SAUR418127 ncbi Staphylococcus aureus aureus Mu35
SAUR367830 Staphylococcus aureus aureus USA3005
SAUR359787 ncbi Staphylococcus aureus aureus JH15
SAUR359786 ncbi Staphylococcus aureus aureus JH95
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4765
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2525
SAUR273036 ncbi Staphylococcus aureus RF1225
SAUR196620 ncbi Staphylococcus aureus aureus MW25
SAUR158879 ncbi Staphylococcus aureus aureus N3155
SAUR158878 ncbi Staphylococcus aureus aureus Mu505
SARE391037 ncbi Salinispora arenicola CNS-2055
SAGA211110 ncbi Streptococcus agalactiae NEM3164
SAGA208435 ncbi Streptococcus agalactiae 2603V/R4
SAGA205921 ncbi Streptococcus agalactiae A9094
SACI56780 ncbi Syntrophus aciditrophicus SB4
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99414
RSP357808 ncbi Roseiflexus sp. RS-14
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RMET266264 ncbi Ralstonia metallidurans CH345
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RCAS383372 ncbi Roseiflexus castenholzii DSM 139415
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257454
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PMAR74547 ncbi Prochlorococcus marinus MIT 93134
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
PACN267747 ncbi Propionibacterium acnes KPA1712025
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
NSP35761 Nocardioides sp.4
NSP103690 ncbi Nostoc sp. PCC 71204
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NFAR247156 ncbi Nocardia farcinica IFM 101524
MXAN246197 ncbi Myxococcus xanthus DK 16225
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-14
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra4
MTUB336982 ncbi Mycobacterium tuberculosis F114
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MTBRV ncbi Mycobacterium tuberculosis H37Rv4
MTBCDC ncbi Mycobacterium tuberculosis CDC15514
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP400668 ncbi Marinomonas sp. MWYL14
MSME246196 ncbi Mycobacterium smegmatis MC2 1554
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
MFLA265072 ncbi Methylobacillus flagellatus KT5
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAVI243243 ncbi Mycobacterium avium 1044
MAQU351348 ncbi Marinobacter aquaeolei VT85
MAER449447 ncbi Microcystis aeruginosa NIES-8434
MABS561007 ncbi Mycobacterium abscessus ATCC 199774
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LSAK314315 ncbi Lactobacillus sakei sakei 23K4
LPLA220668 ncbi Lactobacillus plantarum WCFS14
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82934
LLAC272623 ncbi Lactococcus lactis lactis Il14035
LLAC272622 ncbi Lactococcus lactis cremoris SK115
LJOH257314 ncbi Lactobacillus johnsonii NCC 5334
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-004
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1304
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566014
LINN272626 ncbi Listeria innocua Clip112625
LGAS324831 ncbi Lactobacillus gasseri ATCC 333234
LCHO395495 ncbi Leptothrix cholodnii SP-64
LCAS321967 ncbi Lactobacillus casei ATCC 3344
LBRE387344 ncbi Lactobacillus brevis ATCC 3674
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1974
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5504
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)4
LACI272621 ncbi Lactobacillus acidophilus NCFM4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255865
FMAG334413 ncbi Finegoldia magna ATCC 293285
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5835
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough4
DRED349161 ncbi Desulfotomaculum reducens MI-15
DOLE96561 ncbi Desulfococcus oleovorans Hxd35
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CTET212717 ncbi Clostridium tetani E885
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPHY357809 ncbi Clostridium phytofermentans ISDg5
CPER289380 ncbi Clostridium perfringens SM1015
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CNOV386415 ncbi Clostridium novyi NT5
CKLU431943 ncbi Clostridium kluyveri DSM 5555
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CDIF272563 ncbi Clostridium difficile 6305
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUB ncbi Bacillus subtilis subtilis 1685
BSP36773 Burkholderia sp.5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K165
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BBRO257310 ncbi Bordetella bronchiseptica RB504
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AMAR329726 ncbi Acaryochloris marina MBIC110175
AHYD196024 Aeromonas hydrophila dhakensis5
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACEL351607 ncbi Acidothermus cellulolyticus 11B5
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAEO224324 ncbi Aquifex aeolicus VF54


Names of the homologs of the genes in the group in each of these orgs
  G6475   EG10966   EG10835   EG10097   EG10051   
YPSE349747 YPSIP31758_2561YPSIP31758_0039YPSIP31758_3319YPSIP31758_2035YPSIP31758_3060
YPSE273123 YPTB1433YPTB0035YPTB0751YPTB2036YPTB0991
YPES386656 YPDSF_2286YPDSF_3867YPDSF_2980YPDSF_1069YPDSF_2760
YPES377628 YPN_2568YPN_3812YPN_0713YPN_1530YPN_0965
YPES360102 YPA_0703YPA_3504YPA_2877YPA_1435YPA_2617
YPES349746 YPANGOLA_A1975YPANGOLA_A0043YPANGOLA_A0983YPANGOLA_A2426YPANGOLA_A2888
YPES214092 YPO1409YPO0038YPO3380YPO2053YPO3123
YPES187410 Y2761Y0103Y0811Y2258Y1059
YENT393305 YE1559YE0045YE0744YE2397YE3094
XORY360094 XOOORF_4200XOOORF_3272XOOORF_3313XOOORF_1995
XCAM487884 XCC-B100_0937XCC-B100_1217XCC-B100_1166XCC-B100_1895
XCAM316273 XCAORF_3587XCAORF_3306XCAORF_3353XCAORF_2554
XCAM314565 XC_0956XC_1173XC_1128XC_1832
XCAM190485 XCC3247XCC2936XCC3030XCC2283
XAXO190486 XAC3393XAC3113XAC3154XAC2391
VVUL216895 VV1_2962VV1_0852VV1_1575VV1_2156VV1_2002
VVUL196600 VV2113VV0241VV2821VV2288VV2412
VPAR223926 VP1914VP0159VP2564VP1047VP2180
VFIS312309 VF1194VF0104VF2080VF0949VF1688
VCHO345073 VC0395_A0890VC0395_A2282VC0395_A2029VC0395_A0735VC0395_A0571
VCHO VC1270VC2710VC2451VC1166VC1053
TTUR377629 TERTU_3956TERTU_0172TERTU_1193TERTU_0863
TTEN273068 TTE1197TTE1195TTE1195TTE1231TTE1194
TPSE340099 TETH39_1030TETH39_1028TETH39_1028TETH39_1036TETH39_1027
TFUS269800 TFU_2087TFU_2090TFU_2090TFU_2086TFU_2091
TERY203124 TERY_2653TERY_2653TERY_2354TERY_0435
TELO197221 TLL0584TLL0584TLL1144TLR2338
TDEN292415 TBD_0068TBD_0471TBD_1758TBD_0442
SWOL335541 SWOL_0808SWOL_0806SWOL_0806SWOL_0812
STYP99287 STM0997STM3742STM2956STM1901STM0483
STRO369723 STROP_1818STROP_1815STROP_1815STROP_1821STROP_1814
STHE322159 STER_0860STER_0200STER_0200STER_1948STER_1190
STHE299768 STR0812STR0145STR0145STR1969STR1223
STHE292459 STH2428STH2437STH2437STH2421STH2438
STHE264199 STU0812STU0145STU0145STU1969STU1223
SSUI391296 SSU98_0556SSU98_2097SSU98_2097SSU98_2143SSU98_1323
SSUI391295 SSU05_0555SSU05_2094SSU05_2094SSU05_2141SSU05_1307
SSP94122 SHEWANA3_1493SHEWANA3_3812SHEWANA3_1111SHEWANA3_1953SHEWANA3_2447
SSP84588 SYNW2324OR2546SYNW2324OR2546SYNW2426OR1039SYNW0814OR1685
SSP64471 GSYN2856GSYN2856GSYN3023GSYN1328
SSP321332 CYB_1543CYB_1543CYB_1161CYB_2813
SSP321327 CYA_1944CYA_1944CYA_1681CYA_2018
SSP1148 SLR1259SLR1325SLR1325SLR1720SLL1430
SSP1131 SYNCC9605_2455SYNCC9605_2455SYNCC9605_2595SYNCC9605_1834
SSON300269 SSO_0930SSO_3755SSO_2941SSO_1275SSO_0456
SSED425104 SSED_1662SSED_0334SSED_1287SSED_2030SSED_2853
SSAP342451 SSP1211SSP1125SSP1125SSP1129SSP1124
SPYO370554 MGAS10750_SPY1780MGAS10750_SPY1780MGAS10750_SPY1930MGAS10750_SPY0822
SPYO370553 MGAS2096_SPY1709MGAS2096_SPY1709MGAS2096_SPY1845MGAS2096_SPY0800
SPYO370552 MGAS10270_SPY1755MGAS10270_SPY1755MGAS10270_SPY1905MGAS10270_SPY0787
SPYO370551 MGAS9429_SPY1689MGAS9429_SPY1689MGAS9429_SPY1824MGAS9429_SPY0786
SPYO319701 M28_SPY1674M28_SPY1674M28_SPY1822M28_SPY0708
SPYO293653 M5005_SPY1686M5005_SPY1686M5005_SPY1813M5005_SPY0728
SPYO286636 M6_SPY1694M6_SPY1694M6_SPY1832M6_SPY0754
SPYO198466 SPYM3_1701SPYM3_1701SPYM3_1814SPYM3_0640
SPYO193567 SPS1702SPS1702SPS1812SPS1212
SPYO186103 SPYM18_2045SPYM18_2045SPYM18_2188SPYM18_0984
SPYO160490 SPY1981SPY1981SPY2156SPY0927
SPRO399741 SPRO_1728SPRO_4869SPRO_0792SPRO_2781SPRO_1134
SPNE488221 SP70585_1687SP70585_1686SP70585_1686SP70585_2220SP70585_1618
SPNE487214 SPH_1755SPH_1753SPH_1753SPH_2303SPH_1691
SPNE487213 SPT_1586SPT_1585SPT_1585SPT_2122SPT_1517
SPNE171101 SPR1487SPR1487SPR1924SPR1435
SPNE170187 SPN13050SPN13046SPN13046SPN09140SPN05374
SPNE1313 SPJ_1541SPJ_1539SPJ_1539SPJ_2136SPJ_1483
SPEA398579 SPEA_1635SPEA_3879SPEA_1182SPEA_2366SPEA_1507
SONE211586 SO_3054SO_0359SO_3455SO_2433SO_2012
SMUT210007 SMU_1323SMU_2044SMU_2044SMU_2101SMU_1467
SLOI323850 SHEW_2269SHEW_3499SHEW_1202SHEW_2079SHEW_2236
SHIGELLA YCBLSPOTRELAASPSAPT
SHAL458817 SHAL_2627SHAL_0390SHAL_1219SHAL_1918SHAL_1589
SHAE279808 SH1371SH1287SH1287SH1291SH1286
SGOR29390 SGO_1438SGO_1822SGO_1822SGO_2060SGO_1001
SGLO343509 SG1005SG2223SG0510SG1257SG0688
SFUM335543 SFUM_0469SFUM_2111SFUM_2111SFUM_3302
SFLE373384 SFV_0929SFV_3879SFV_2673SFV_1868SFV_0442
SFLE198214 AAN42553.1AAN45137.1AAN44285.1AAN43432.1AAN42069.1
SERY405948 SACE_2031SACE_2028SACE_2028SACE_2041
SEPI176280 SE_1231SE_1315SE_1315SE_1311SE_1317
SEPI176279 SERP1110SERP1196SERP1196SERP1192SERP1198
SENT454169 SEHA_C1095SEHA_C4068SEHA_C3162SEHA_C2115SEHA_C0587
SENT321314 SCH_0954SCH_3666SCH_2896SCH_1909SCH_0524
SENT295319 SPA1801SPA3594SPA2821SPA0968SPA2239
SENT220341 STY0999STY4050STY3094STY2109STY0527
SENT209261 T1937T3776T2865T0976T2377
SELO269084 SYC0605_DSYC0179_CSYC0179_CSYC0240_CSYC1650_D
SDYS300267 SDY_2330SDY_4082SDY_3001SDY_1153SDY_0450
SDEN318161 SDEN_3435SDEN_1193SDEN_1887SDEN_2382
SDEG203122 SDE_0394SDE_3697SDE_2238SDE_0913
SBOY300268 SBO_2218SBO_3727SBO_2665SBO_1189SBO_0369
SBAL402882 SHEW185_2751SHEW185_0351SHEW185_3144SHEW185_2307SHEW185_2616
SBAL399599 SBAL195_2827SBAL195_0358SBAL195_3289SBAL195_2423SBAL195_2691
SAVE227882 SAV6843SAV6840SAV6840SAV6839
SAUR93062 SACOL1602SACOL1689SACOL1689SACOL1685SACOL1690
SAUR93061 SAOUHSC_01644SAOUHSC_01742SAOUHSC_01742SAOUHSC_01737SAOUHSC_01743
SAUR426430 NWMN_1449NWMN_1536NWMN_1536NWMN_1532NWMN_1537
SAUR418127 SAHV_1532SAHV_1621SAHV_1621SAHV_1617SAHV_1622
SAUR367830 SAUSA300_1505SAUSA300_1590SAUSA300_1590SAUSA300_1586SAUSA300_1591
SAUR359787 SAURJH1_1637SAURJH1_1724SAURJH1_1724SAURJH1_1720SAURJH1_1725
SAUR359786 SAURJH9_1603SAURJH9_1691SAURJH9_1691SAURJH9_1687SAURJH9_1692
SAUR282459 SAS1483SAS1570SAS1570SAS1566SAS1571
SAUR282458 SAR1622SAR1714SAR1714SAR1710SAR1715
SAUR273036 SAB1417CSAB1503CSAB1503CSAB1499CSAB1504C
SAUR196620 MW1497MW1584MW1584MW1580MW1585
SAUR158879 SA1375SA1460SA1460SA1456SA1461
SAUR158878 SAV1545SAV1634SAV1634SAV1630SAV1635
SARE391037 SARE_1808SARE_1805SARE_1805SARE_1812SARE_1804
SAGA211110 GBS1928GBS1928GBS2060GBS1278
SAGA208435 SAG_1940SAG_1940SAG_2107SAG_1205
SAGA205921 SAK_1900SAK_1900SAK_2046SAK_1292
SACI56780 SYN_02709SYN_00904SYN_00904SYN_02535
RXYL266117 RXYL_1123RXYL_1338RXYL_1338RXYL_1432
RSP357808 ROSERS_4122ROSERS_4122ROSERS_1979ROSERS_0741
RSOL267608 RSC3268RSC2153RSC1576RSC0466RSC0417
RRUB269796 RRU_A1522RRU_A1856RRU_A1856RRU_A0607
RMET266264 RMET_3433RMET_0858RMET_1159RMET_0378RMET_0311
RFER338969 RFER_0167RFER_3149RFER_2071RFER_1297RFER_4239
REUT381666 H16_A3582H16_A0955H16_A1337H16_A0453H16_A0395
REUT264198 REUT_A3268REUT_A2471REUT_A1274REUT_A0439REUT_A0363
RCAS383372 RCAS_1819RCAS_1219RCAS_1219RCAS_3786RCAS_0332
PTHE370438 PTH_1047PTH_1045PTH_1045PTH_1049
PSYR223283 PSPTO_0073PSPTO_1694PSPTO_3981PSPTO_1990
PSYR205918 PSYR_0209PSYR_3695PSYR_1406PSYR_3426
PSTU379731 PST_1121PST_0459PST_2669PST_2813PST_1828
PSP312153 PNUC_0031PNUC_1076PNUC_0828PNUC_1892
PPUT76869 PPUTGB1_0811PPUTGB1_5350PPUTGB1_1257PPUTGB1_4205PPUTGB1_3831
PPUT351746 PPUT_0797PPUT_5211PPUT_4062PPUT_1242PPUT_1602
PPUT160488 PP_0772PP_5302PP_1656PP_1213PP_4266
PPRO298386 PBPRA2349PBPRA0189PBPRA3082PBPRA1112PBPRA1016
PPEN278197 PEPE_1120PEPE_1120PEPE_1115PEPE_1129
PMUL272843 PM0272PM0920PM1865PM0983PM0363
PMEN399739 PMEN_3651PMEN_4390PMEN_1735PMEN_1268PMEN_2616
PMAR74547 PMT2111PMT2111PMT2216PMT0810
PLUM243265 PLU1749PLU0272PLU0910PLU2107PLU3842
PING357804 PING_0215PING_0203PING_0530PING_0699PING_2278
PHAL326442 PSHAA1401PSHAA2793PSHAA0739PSHAA1938PSHAA1200
PFLU220664 PFL_5091PFL_6063PFL_4446PFL_4767PFL_1909
PFLU216595 PFLU0930PFLU5995PFLU4505PFLU4917PFLU4571
PFLU205922 PFL_4704PFL_5551PFL_4217PFL_4411PFL_1810
PENT384676 PSEEN0914PSEEN5447PSEEN1364PSEEN4096PSEEN1791
PCAR338963 PCAR_2012PCAR_1287PCAR_1040PCAR_1431
PATL342610 PATL_0349PATL_3707PATL_2948PATL_2898
PAER208964 PA0832PA5338PA0934PA0963PA1543
PAER208963 PA14_53510PA14_70470PA14_52180PA14_51820PA14_44500
PACN267747 PPA1168PPA1166PPA1166PPA1175PPA1164
OIHE221109 OB1916OB2024OB2024OB2019OB2025
NSP35761 NOCA_2522NOCA_2392NOCA_2392NOCA_2391
NSP103690 ALL1549ALL1549ALL2436ALR4582
NOCE323261 NOC_1713NOC_1214NOC_1300NOC_0302NOC_0169
NMUL323848 NMUL_A1621NMUL_A0050NMUL_A2505NMUL_A0603NMUL_A0935
NMEN374833 NMCC_0137NMCC_1569NMCC_1648NMCC_1676NMCC_1572
NMEN272831 NMC2029NMC1577NMC1655NMC1684NMC1580
NMEN122587 NMA0387NMA1917NMA1991NMA2019NMA1920
NMEN122586 NMB_2049NMB_1659NMB_1735NMB_0466NMB_1662
NGON242231 NGO2033NGO1308NGO1382NGO1489NGO1311
NFAR247156 NFA16980NFA36840NFA36840NFA36490
MXAN246197 MXAN_0179MXAN_3204MXAN_3204MXAN_4684MXAN_5352
MVAN350058 MVAN_2589MVAN_2587MVAN_2587MVAN_2615
MTUB419947 MRA_2610MRA_2612MRA_2612MRA_2601
MTUB336982 TBFG_12601TBFG_12603TBFG_12603TBFG_12592
MTHE264732 MOTH_1678MOTH_1680MOTH_1680MOTH_1676
MTBRV RV2581CRV2583CRV2583CRV2572C
MTBCDC MT2658MT2660MT2660MT2648
MSUC221988 MS0824MS1736MS0241MS0708MS0870
MSP400668 MMWYL1_4386MMWYL1_1253MMWYL1_2187MMWYL1_2232
MSME246196 MSMEG_2975MSMEG_2965MSMEG_2965MSMEG_3003
MPET420662 MPE_A0092MPE_A2721MPE_A1578MPE_A1070MPE_A3812
MMAG342108 AMB1208AMB2253AMB2253AMB2849
MGIL350054 MFLV_3810MFLV_3812MFLV_3812MFLV_3785
MFLA265072 MFLA_1814MFLA_0050MFLA_1298MFLA_2384MFLA_2383
MCAP243233 MCA_0660MCA_2023MCA_1920MCA_1776MCA_0816
MAVI243243 MAV_3461MAV_3464MAV_3464MAV_3447
MAQU351348 MAQU_2524MAQU_0636MAQU_2238MAQU_1707MAQU_2814
MAER449447 MAE_53150MAE_53150MAE_37270MAE_40610
MABS561007 MAB_2873CMAB_2876CMAB_2876CMAB_2865C
LWEL386043 LWE2183LWE1536LWE1536LWE1532LWE1537
LSPH444177 BSPH_3619BSPH_3908BSPH_3908BSPH_3901BSPH_3913
LSAK314315 LSA0737LSA0737LSA0864LSA1276
LPLA220668 LP_1987LP_1987LP_1980LP_2086
LMON265669 LMOF2365_2199LMOF2365_1542LMOF2365_1542LMOF2365_1538LMOF2365_1543
LMON169963 LMO2167LMO1523LMO1523LMO1519LMO1524
LMES203120 LEUM_1367LEUM_1367LEUM_1309LEUM_1473
LLAC272623 L128550L0213L0213L0346L22735
LLAC272622 LACR_0539LACR_0092LACR_0092LACR_2226LACR_0657
LJOH257314 LJ_1394LJ_1394LJ_1391LJ_1474
LINT363253 LI0655LI0170LI0170LI0987
LINT267671 LIC_11012LIC_11012LIC_12108LIC_20142
LINT189518 LA3084LA3084LA1680LB176
LINN272626 LIN2270LIN1558LIN1558LIN1554LIN1559
LGAS324831 LGAS_0857LGAS_0857LGAS_0860LGAS_0827
LCHO395495 LCHO_4053LCHO_0731LCHO_1899LCHO_4013
LCAS321967 LSEI_1539LSEI_1539LSEI_1526LSEI_1557
LBRE387344 LVIS_0728LVIS_0728LVIS_0736LVIS_1376
LBOR355277 LBJ_0842LBJ_0842LBJ_1198LBJ_4170
LBOR355276 LBL_2240LBL_2240LBL_1250LBL_4185
LBIF355278 LBF_2549LBF_2258LBF_2041LBF_4124
LACI272621 LBA0932LBA0932LBA0936LBA1242
KPNE272620 GKPORF_B5395GKPORF_B3359GKPORF_B2460GKPORF_B1542GKPORF_B4783
JSP375286 MMA_1210MMA_1326MMA_1486MMA_3099
ILOI283942 IL2380IL0804IL1089IL1850
HSOM228400 HSM_1559HSM_0548HSM_1986HSM_0857HSM_0362
HSOM205914 HS_1074HS_1455HS_0095HS_1223HS_1201
HMOD498761 HM1_1845HM1_1843HM1_1843HM1_1848
HINF71421 HI_1663HI_1741HI_0334HI_0317HI_1230
HINF374930 CGSHIEE_03735CGSHIEE_03330CGSHIEE_01330CGSHIEE_01440CGSHIEE_03885
HINF281310 NTHI1965NTHI2052NTHI0452NTHI0435NTHI1938
HDUC233412 HD_1020HD_1924HD_1185HD_0599HD_1818
HCHE349521 HCH_05737HCH_06313HCH_01807HCH_04927
HAUR316274 HAUR_3706HAUR_4475HAUR_4475HAUR_4379
HARS204773 HEAR2321HEAR2132HEAR1802HEAR2844
GVIO251221 GLR2748GLR2748GLL1928GLR2747
GURA351605 GURA_2928GURA_3160GURA_3160GURA_2196GURA_2616
GTHE420246 GTNG_2378GTNG_2509GTNG_2509GTNG_2510
GSUL243231 GSU_1123GSU_2236GSU_2236GSU_1463GSU_1526
GMET269799 GMET_2674GMET_2325GMET_2325GMET_1357GMET_1422
GKAU235909 GK2439GK2578GK2578GK2572GK2579
FTUL458234 FTA_1501FTA_0303FTA_0024FTA_1888
FTUL418136 FTW_0605FTW_0783FTW_1997FTW_0154
FTUL401614 FTN_1198FTN_1518FTN_0129FTN_1633
FTUL393115 FTF0808FTF1508CFTF0007FTF0078
FTUL393011 FTH_1376FTH_0284FTH_0020FTH_1718
FTUL351581 FTL_1413FTL_0285FTL_0020FTL_1782
FRANT SPOTRELAASPSAPT
FPHI484022 FPHI_1489FPHI_1125FPHI_0695FPHI_0975
FNUC190304 FN1162FN1482FN1482FN0299FN1483
FMAG334413 FMG_0808FMG_0810FMG_0810FMG_0858FMG_0397
ESP42895 ENT638_1446ENT638_0089ENT638_3236ENT638_2434ENT638_0949
EFER585054 EFER_1071EFER_3942EFER_0280EFER_1206EFER_2548
EFAE226185 EF_2432EF_1974EF_1974EF_1970EF_1687
ECOO157 YCBLSPOTRELAASPSAPT
ECOL83334 ECS1010ECS4525ECS3644ECS2576ECS0522
ECOL585397 ECED1_0957ECED1_4334ECED1_3237ECED1_2071ECED1_0492
ECOL585057 ECIAI39_2220ECIAI39_4172ECIAI39_3203ECIAI39_1183ECIAI39_0202
ECOL585056 ECUMN_1121ECUMN_4166ECUMN_3113ECUMN_2164ECUMN_0508
ECOL585055 EC55989_0973EC55989_4116EC55989_3059EC55989_2045EC55989_0482
ECOL585035 ECS88_0955ECS88_4065ECS88_3052ECS88_1924ECS88_0466
ECOL585034 ECIAI1_0968ECIAI1_3822ECIAI1_2892ECIAI1_1953ECIAI1_0472
ECOL481805 ECOLC_2669ECOLC_0061ECOLC_0928ECOLC_1766ECOLC_3147
ECOL469008 ECBD_2668ECBD_0075ECBD_0945ECBD_1772ECBD_3187
ECOL439855 ECSMS35_2193ECSMS35_3985ECSMS35_2922ECSMS35_1320ECSMS35_0512
ECOL413997 ECB_00931ECB_03507ECB_02629ECB_01837ECB_00420
ECOL409438 ECSE_0986ECSE_3932ECSE_3042ECSE_2042ECSE_0494
ECOL405955 APECO1_39APECO1_2811APECO1_3747APECO1_916APECO1_1546
ECOL364106 UTI89_C0999UTI89_C4195UTI89_C3154UTI89_C2070UTI89_C0496
ECOL362663 ECP_0938ECP_3748ECP_2765ECP_1810ECP_0530
ECOL331111 ECE24377A_1026ECE24377A_4153ECE24377A_3088ECE24377A_2096ECE24377A_0506
ECOL316407 ECK0918:JW0910:B0927ECK3640:JW3625:B3650ECK2778:JW2755:B2784ECK1867:JW1855:B1866ECK0463:JW0458:B0469
ECOL199310 C1069C4475C3347C2280C0588
ECAR218491 ECA2544ECA0038ECA3569ECA2496ECA1175
DVUL882 DVU_2765DVU_2083DVU_2083DVU_3367
DRED349161 DRED_0735DRED_0733DRED_0733DRED_0757DRED_0732
DOLE96561 DOLE_2072DOLE_2057DOLE_2057DOLE_0670DOLE_2619
DHAF138119 DSY2449DSY2451DSY2451DSY2431DSY2452
DDES207559 DDE_0786DDE_1569DDE_1569DDE_0012
DARO159087 DARO_0841DARO_3843DARO_2827DARO_0634
CVIO243365 CV_0087CV_3768CV_3702CV_3740CV_3772
CTET212717 CTC_02196CTC_02199CTC_02199CTC_02194CTC_02200
CSAL290398 CSAL_3235CSAL_1638CSAL_1844CSAL_2098
CPSY167879 CPS_3586CPS_4973CPS_4115CPS_2114CPS_3745
CPHY357809 CPHY_0549CPHY_0548CPHY_0548CPHY_0553CPHY_0547
CPER289380 CPR_1902CPR_1904CPR_1904CPR_1899CPR_1905
CPER195103 CPF_2191CPF_2193CPF_2193CPF_2188CPF_2194
CPER195102 CPE1936CPE1938CPE1938CPE1933CPE1939
CNOV386415 NT01CX_1846NT01CX_1844NT01CX_1844NT01CX_1849NT01CX_1843
CKLU431943 CKL_3129CKL_3131CKL_3131CKL_3126CKL_3132
CJAP155077 CJA_3137CJA_3571CJA_2575CJA_1027
CHYD246194 CHY_2221CHY_2223CHY_2223CHY_2204CHY_2027
CDIF272563 CD2742CD2744CD2744CD2739CD2745
CDES477974 DAUD_0903DAUD_0901DAUD_0901DAUD_0906
CBOT536232 CLM_3462CLM_3464CLM_3464CLM_3459CLM_3465
CBOT515621 CLJ_B3322CLJ_B3324CLJ_B3324CLJ_B3319CLJ_B3325
CBOT508765 CLL_A1033CLL_A1031CLL_A1031CLL_A1036CLL_A1030
CBOT498213 CLD_1483CLD_1481CLD_1481CLD_1486CLD_1480
CBOT441772 CLI_3116CLI_3118CLI_3118CLI_3113CLI_3119
CBOT441771 CLC_2959CLC_2961CLC_2961CLC_2956CLC_2962
CBOT441770 CLB_3086CLB_3088CLB_3088CLB_3083CLB_3089
CBOT36826 CBO3057CBO3059CBO3059CBO3054CBO3060
CBEI290402 CBEI_1542CBEI_1540CBEI_1540CBEI_1545CBEI_1539
CACE272562 CAC2272CAC2274CAC2274CAC2269CAC2275
BWEI315730 BCERKBAB4_4114BCERKBAB4_4254BCERKBAB4_4254BCERKBAB4_4249BCERKBAB4_4255
BVIE269482 BCEP1808_0245BCEP1808_0918BCEP1808_1438BCEP1808_2831BCEP1808_2889
BTHU412694 BALH_3856BALH_3988BALH_3988BALH_3984BALH_3989
BTHU281309 BT9727_4003BT9727_4140BT9727_4140BT9727_4135BT9727_4141
BTHA271848 BTH_I3151BTH_I1588BTH_I2597BTH_I0560BTH_I0493
BSUB BSU24790BSU27600BSU27600BSU27550BSU27610
BSP36773 BCEP18194_A3388BCEP18194_A4109BCEP18194_A4614BCEP18194_A6052BCEP18194_A6114
BPUM315750 BPUM_2209BPUM_2401BPUM_2401BPUM_2396BPUM_2402
BPSE320373 BURPS668_3822BURPS668_2947BURPS668_1709BURPS668_0675BURPS668_0588
BPSE320372 BURPS1710B_A0048BURPS1710B_A3304BURPS1710B_A2044BURPS1710B_A0902BURPS1710B_A0814
BPSE272560 BPSL3277BPSL2561BPSL1946BPSL0644BPSL0540
BPET94624 BPET2246BPET1735BPET4847BPET0461
BPER257313 BP1576BP3587BP0709BP0264
BMAL320389 BMA10247_2969BMA10247_1962BMA10247_0960BMA10247_2406BMA10247_2949
BMAL320388 BMASAVP1_A3400BMASAVP1_A0817BMASAVP1_A1542BMASAVP1_A2752BMASAVP1_A0069
BMAL243160 BMA_2909BMA_2094BMA_1098BMA_0193
BLIC279010 BL01575BL01124BL01124BL05288BL01126
BHAL272558 BH2820BH1242BH1242BH1252BH1241
BCLA66692 ABC2499ABC1570ABC1570ABC1577ABC1569
BCER572264 BCA_4372BCA_4518BCA_4518BCA_4514BCA_4519
BCER405917 BCE_4341BCE_4491BCE_4491BCE_4485BCE_4492
BCER315749 BCER98_2989BCER98_3123BCER98_3123BCER98_3118BCER98_3124
BCER288681 BCE33L4013BCE33L4151BCE33L4151BCE33L4145BCE33L4152
BCER226900 BC_4258BC_4401BC_4401BC_4397BC_4402
BCEN331272 BCEN2424_0285BCEN2424_1001BCEN2424_1473BCEN2424_2725BCEN2424_2784
BCEN331271 BCEN_2821BCEN_0522BCEN_0991BCEN_2113BCEN_2170
BBRO257310 BB2973BB3776BB0115BB4493
BANT592021 BAA_4504BAA_4654BAA_4654BAA_4650BAA_4655
BANT568206 BAMEG_4521BAMEG_4671BAMEG_4671BAMEG_4667BAMEG_4672
BANT261594 GBAA4485GBAA4637GBAA4637GBAA4632GBAA4638
BANT260799 BAS4163BAS4302BAS4302BAS4297BAS4303
BAMY326423 RBAM_023120RBAM_024710RBAM_024710RBAM_024660RBAM_024720
BAMB398577 BAMMC406_0213BAMMC406_0873BAMMC406_1398BAMMC406_2643BAMMC406_2702
BAMB339670 BAMB_0199BAMB_0861BAMB_1358BAMB_2776BAMB_2844
AVAR240292 AVA_4989AVA_4989AVA_0247AVA_2470
ASP76114 EBA2717EBA3497EBA6528EBA4339
ASP62928 AZO3823AZO3951AZO1688AZO3239
ASP232721 AJS_0228AJS_0949AJS_3149AJS_0874AJS_4134
ASAL382245 ASA_2079ASA_0034ASA_3478ASA_2844ASA_2089
APLE434271 APJL_0124APJL_1861APJL_1169APJL_0274
APLE416269 APL_0123APL_1825APL_0405APL_1149APL_0266
AORE350688 CLOS_1712CLOS_1714CLOS_1714CLOS_1709CLOS_1715
AMET293826 AMET_2355AMET_2353AMET_2353AMET_2359AMET_2352
AMAR329726 AM1_D0256AM1_2514AM1_2514AM1_4421AM1_2945
AHYD196024 AHA_2221AHA_0039AHA_0818AHA_1521AHA_2210
AEHR187272 MLG_2184MLG_2442MLG_1097MLG_2665
ADEH290397 ADEH_3479ADEH_2550ADEH_2550ADEH_2533ADEH_0751
ACEL351607 ACEL_1336ACEL_1338ACEL_1338ACEL_1334ACEL_1339
ABOR393595 ABO_2386ABO_0176ABO_1623ABO_0749
ABAU360910 BAV1957BAV1100BAV0115BAV3106
ABAC204669 ACID345_1901ACID345_0175ACID345_0175ACID345_3608
AAVE397945 AAVE_0282AAVE_3585AAVE_1588AAVE_3637AAVE_4787
AAEO224324 AQ_2135AQ_844AQ_844AQ_1677


Organism features enriched in list (features available for 317 out of the 332 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00001576892
Arrangment:Clusters 0.00039001617
Arrangment:Pairs 1.058e-887112
Disease:Pneumonia 0.00060621212
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00113321111
Disease:Wide_range_of_infections 0.00113321111
Endospores:No 0.000633597211
Endospores:Yes 5.737e-145253
GC_Content_Range4:40-60 0.0053478135224
GC_Content_Range7:0-30 0.00069081547
GC_Content_Range7:50-60 0.000243874107
Genome_Size_Range5:0-2 4.907e-2135155
Genome_Size_Range5:4-6 1.331e-14142184
Genome_Size_Range5:6-10 0.00419063447
Genome_Size_Range9:1-2 1.932e-1235128
Genome_Size_Range9:4-5 3.320e-67296
Genome_Size_Range9:5-6 7.877e-87088
Genome_Size_Range9:6-8 0.00236402938
Gram_Stain:Gram_Neg 0.0086123169333
Gram_Stain:Gram_Pos 1.942e-13119150
Habitat:Host-associated 0.003593498206
Habitat:Multiple 0.0005617114178
Habitat:Specialized 0.00210941953
Habitat:Terrestrial 0.00411102431
Motility:Yes 0.0007978163267
Optimal_temp.:30-37 0.00021961718
Optimal_temp.:35-37 0.00367141213
Oxygen_Req:Anaerobic 0.002167043102
Oxygen_Req:Facultative 4.989e-15153201
Pathogenic_in:Human 4.967e-6141213
Pathogenic_in:No 0.0000645101226
Shape:Coccus 0.00003376182
Shape:Rod 6.768e-7217347
Shape:Sphere 0.0004621319
Shape:Spiral 0.0001320834
Temp._range:Hyperthermophilic 0.0000322323
Temp._range:Mesophilic 0.0001481274473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 137
Effective number of orgs (counting one per cluster within 468 clusters): 121

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278151
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.1
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 71
SSP644076 Silicibacter sp. TrichCH4B1
SSOL273057 ncbi Sulfolobus solfataricus P21
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.1
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PAER178306 ncbi Pyrobaculum aerophilum IM21
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCAV227941 ncbi Chlamydophila caviae GPIC0
CAULO ncbi Caulobacter crescentus CB151
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054761
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BQUI283165 ncbi Bartonella quintana Toulouse1
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-11
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5831
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K11
AMAR234826 ncbi Anaplasma marginale St. Maries0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041


Names of the homologs of the genes in the group in each of these orgs
  G6475   EG10966   EG10835   EG10097   EG10051   
XAUT78245 XAUT_1755
WPIP955
WPIP80849
UURE95667 UU488
UURE95664 UUR10_0545
UPAR505682 UPA3_0506
UMET351160 RCIX100
TWHI218496
TWHI203267
TVOL273116
TSP28240 TRQ2_1445
TPET390874 TPET_1399
TPEN368408
TPAL243276
TMAR243274 TM_1384
TLET416591 TLET_1659
TKOD69014
TDEN243275 TDE_2403
TACI273075
STOK273063 ST2022
SSP644076 SCH4B_2484
SSOL273057 SSO3132
SMAR399550
SACI330779 SACI_0123
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RPAL316055 RPE_0233
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_1462
RAKA293614
PTOR263820
PSP117 RB5847
PMOB403833 PMOB_1065
PMAR167546 P9301ORF_1921
PMAR167542 P9515ORF_1962
PLUT319225 PLUT_1727
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102 PARS_0673
PAER178306 PAE1540
PABY272844
OTSU357244
NSEN222891
NPHA348780 NP4032A
MTHE349307 MTHE_0314
MTHE187420
MSYN262723
MSTA339860
MSED399549 MSED_0369
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_0227
MMAR426368 MMARC7_1686
MMAR402880 MMARC5_0915
MMAR394221 MMAR10_0743
MMAR368407 MEMAR_0052
MMAR267377 MMP0660
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1777
MBAR269797
MART243272
MAEO419665
MACE188937 MA4617
IHOS453591
HWAL362976
HSP64091 VNG1327G
HSAL478009 OE2902F
HNEP81032 HNE_0649
HMUK485914
HMAR272569
HBUT415426
FNOD381764 FNOD_0873
FJOH376686 FJOH_2974
ERUM302409
ERUM254945
ECHA205920
ECAN269484
DSHI398580 DSHI_2074
CTRA471473
CTRA471472
CTEP194439 CT_0293
CSUL444179
CSP78 CAUL_1588
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992 SAR11_1213
CMUR243161
CMET456442
CMAQ397948
CKOR374847 KCR_0511
CFEL264202
CCAV227941
CAULO CC1183
CABO218497
BXEN266265
BTUR314724
BTRI382640 BT_0738
BSP107806 BU316
BQUI283165 BQ03400
BHER314723
BHEN283166 BH11740
BGAR290434
BBUR224326
BBAC360095 BARBAKC583_0988
BAPH372461
BAPH198804 BUSG306
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557 APE1260
AMAR234826
AFUL224325 AF_0575


Organism features enriched in list (features available for 125 out of the 137 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.003702769
Arrangment:Chains 8.651e-7492
Arrangment:Pairs 5.948e-68112
Disease:Pharyngitis 3.729e-688
Disease:Rocky_Mountain_Spotted_Fever 0.009671033
Disease:bronchitis_and_pneumonitis 3.729e-688
Endospores:No 1.983e-872211
GC_Content_Range4:0-40 7.740e-769213
GC_Content_Range4:60-100 4.447e-613145
GC_Content_Range7:0-30 3.373e-102947
GC_Content_Range7:50-60 0.003024413107
GC_Content_Range7:60-70 0.000037213134
Genome_Size_Range5:0-2 1.512e-3288155
Genome_Size_Range5:2-4 0.000729528197
Genome_Size_Range5:4-6 5.786e-157184
Genome_Size_Range5:6-10 0.0006816247
Genome_Size_Range9:0-1 2.182e-142427
Genome_Size_Range9:1-2 6.076e-1764128
Genome_Size_Range9:3-4 0.0004599677
Genome_Size_Range9:4-5 3.303e-7496
Genome_Size_Range9:5-6 3.209e-7388
Genome_Size_Range9:6-8 0.0008310138
Gram_Stain:Gram_Pos 4.967e-162150
Habitat:Host-associated 0.000362160206
Habitat:Multiple 2.454e-129178
Habitat:Specialized 0.00002772453
Habitat:Terrestrial 0.0040688131
Optimal_temp.:100 0.009671033
Optimal_temp.:35-40 0.009671033
Optimal_temp.:80 0.009671033
Optimal_temp.:85 0.002034244
Oxygen_Req:Anaerobic 2.993e-640102
Oxygen_Req:Facultative 1.850e-622201
Pathogenic_in:Ruminant 0.009671033
Salinity:Extreme_halophilic 0.005602857
Shape:Irregular_coccus 4.112e-91517
Shape:Rod 9.500e-751347
Shape:Sphere 4.596e-91619
Temp._range:Hyperthermophilic 1.120e-112023
Temp._range:Mesophilic 1.155e-780473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5386 (methylglyoxal degradation I)3052340.4599
PWY-5493 (reductive monocarboxylic acid cycle)2431960.4387
PWY0-1314 (fructose degradation)2241820.4199
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))1211160.4190
GLUAMCAT-PWY (N-acetylglucosamine degradation I)3562540.4179
PWY-5497 (purine nucleotides degradation IV (anaerobic))1221160.4134
PWY0-381 (glycerol degradation I)4172820.4088
PWY-6317 (galactose degradation I (Leloir pathway))4643020.4039
THISYN-PWY (thiamin biosynthesis I)5023170.4024



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10966   EG10835   EG10097   EG10051   
G64750.9991320.9991330.9988090.998903
EG109660.9999160.9991710.999182
EG108350.9992410.99934
EG100970.998967
EG10051



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PAIRWISE BLAST SCORES:

  G6475   EG10966   EG10835   EG10097   EG10051   
G64750.0f0----
EG10966-0.0f0---
EG10835--0.0f0--
EG10097---0.0f0-
EG10051----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PPGPPMET-PWY (ppGpp biosynthesis) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.400, average score: 0.750)
  Genes in pathway or complex:
             0.2888 0.0001 EG10413 (gpp) PPPGPPHYDRO-MONOMER (Gpp)
   *in cand* 0.9995 0.9991 EG10835 (relA) RELA-MONOMER (GDP pyrophosphokinase / GTP pyrophosphokinase)
   *in cand* 0.9995 0.9991 EG10966 (spoT) SPOT-MONOMER (guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase [multifunctional])
             0.5063 0.1989 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9989 EG10051 (apt) ADENPRIBOSYLTRAN-MONOMER (Apt)
   *in cand* 0.9992 0.9988 EG10097 (aspS) ASPS-MONOMER (aspartyl-tRNA synthetase)
   *in cand* 0.9992 0.9988 G6475 (ycbL) G6475-MONOMER (predicted metal-binding enzyme)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6475 (centered at G6475)
EG10966 (centered at EG10966)
EG10835 (centered at EG10835)
EG10097 (centered at EG10097)
EG10051 (centered at EG10051)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6475   EG10966   EG10835   EG10097   EG10051   
380/623411/623402/623406/623401/623
AAEO224324:0:Tyes91500592-
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