CANDIDATE ID: 759

CANDIDATE ID: 759

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9914300e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   2.2000320e-28

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11668 (atoC) (b2220)
   Products of gene:
     - ATOC-MONOMER (AtoC transcriptional activator; Az protein inhibitor of ODC)
     - PHOSPHO-ATOC (AtoC-phosphorylated transcriptional activator)
       Regulatees:
        TU00114 (atoDAEB)

- EG11667 (atoS) (b2219)
   Products of gene:
     - PHOSPHO-ATOS (AtoS sensory histidine kinase - phosphorylated)
     - ATOS-MONOMER (AtoS)
     - CPLX0-7870 (AtoS sensory histidine kinase)

- EG10482 (zraR) (b4004)
   Products of gene:
     - HYDG-MONOMER (ZraR transcriptional activator)
     - PHOSPHO-HYDG (ZraR-Phosphorylated transcriptional activator)
       Regulatees:
        TU783 (zraSR)
        TU782 (zraP)

- EG10387 (glnL) (b3869)
   Products of gene:
     - PROTEIN-NRIIP (NtrB-P)
     - PROTEIN-NRII (NtrB)
       Regulatees:
     - GLNL-CPLX (NtrB)

- EG10008 (zraS) (b4003)
   Products of gene:
     - HYDH-MONOMER (ZraS sensory histidine kinase)
     - PHOSPHO-HYDH (ZraS sensory histidine kinase - phosphorylated)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 101
Effective number of orgs (counting one per cluster within 468 clusters): 71

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VFIS312309 ncbi Vibrio fischeri ES1144
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TDEN243275 ncbi Treponema denticola ATCC 354054
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB34
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2275
SACI56780 ncbi Syntrophus aciditrophicus SB5
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RFER338969 ncbi Rhodoferax ferrireducens T1185
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP117 Pirellula sp.4
PPRO298386 ncbi Photobacterium profundum SS94
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUT319225 ncbi Chlorobium luteolum DSM 2734
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
MXAN246197 ncbi Myxococcus xanthus DK 16225
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MCAP243233 ncbi Methylococcus capsulatus Bath5
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-005
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
HHAL349124 ncbi Halorhodospira halophila SL15
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
GURA351605 ncbi Geobacter uraniireducens Rf45
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GMET269799 ncbi Geobacter metallireducens GS-155
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough5
DRED349161 ncbi Desulfotomaculum reducens MI-15
DPSY177439 ncbi Desulfotalea psychrophila LSv545
DOLE96561 ncbi Desulfococcus oleovorans Hxd35
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G205
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE255
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
BVIE269482 ncbi Burkholderia vietnamiensis G44
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHAL272558 ncbi Bacillus halodurans C-1254
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1005
ASP62928 ncbi Azoarcus sp. BH725
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455


Names of the homologs of the genes in the group in each of these orgs
  EG11668   EG11667   EG10482   EG10387   EG10008   
YPSE349747 YPSIP31758_2820YPSIP31758_2821YPSIP31758_2820YPSIP31758_0026YPSIP31758_2821
YPSE273123 YPTB1205YPTB1204YPTB1205YPTB0023YPTB1204
YPES377628 YPN_2824YPN_2825YPN_2824YPN_0250YPN_2825
YPES360102 YPA_1085YPA_1084YPA_1085YPA_3519YPA_1084
XAUT78245 XAUT_1032XAUT_1033XAUT_1032XAUT_4400XAUT_1033
VFIS312309 VF1400VF0937VF0096VF1400
VCHO345073 VC0395_A2321VC0395_A1128VC0395_A2321VC0395_A2320
VCHO VC2749VC1521VC2749VC2748
TDEN243275 TDE_1969TDE_1970TDE_1969TDE_1970
TCRU317025 TCR_1445TCR_2187TCR_0905TCR_0905
STYP99287 STM4005STM4173STM4174STM4006STM4173
STHE292459 STH2087STH749STH2087STH749
SSON300269 SSO_2279SSO_2278SSO_4177SSO_4041SSO_4176
SSED425104 SSED_0126SSED_0282SSED_0283SSED_0126
SHIGELLA HYDGHYDHHYDGGLNLHYDH
SFUM335543 SFUM_0853SFUM_2763SFUM_0827SFUM_0854SFUM_2763
SFLE373384 SFV_4076SFV_4075SFV_4076SFV_3632SFV_4075
SFLE198214 AAN45505.1AAN45504.1AAN45505.1AAN45374.1AAN45504.1
SENT454169 SEHA_C4333SEHA_C4504SEHA_C4505SEHA_C4334SEHA_C4504
SENT321314 SCH_3897SCH_4054SCH_4055SCH_3898SCH_4054
SENT295319 SPA3846SPA4010SPA4011SPA3847SPA4010
SENT220341 STY3876STY3712STY3711STY3875STY3712
SENT209261 T3616T3458T3457T3615T3458
SDYS300267 SDY_3722SDY_3723SDY_3722SDY_3874SDY_3723
SDEG203122 SDE_0499SDE_0499SDE_0500SDE_3803
SBOY300268 SBO_3880SBO_4024SBO_4025SBO_3881SBO_4024
SACI56780 SYN_02214SYN_02215SYN_02214SYN_02215SYN_02215
RRUB269796 RRU_A1385RRU_A1384RRU_A1385RRU_A1677RRU_A1384
RPAL316056 RPC_0827RPC_0828RPC_0827RPC_2577RPC_0828
RFER338969 RFER_2741RFER_2742RFER_2786RFER_2981RFER_2742
PTHE370438 PTH_2258PTH_2257PTH_2258PTH_1422PTH_1422
PSYR223283 PSPTO_1956PSPTO_1955PSPTO_1956PSPTO_0353
PSTU379731 PST_3646PST_3156PST_3646PST_0350
PSP117 RB10323RB10322RB10323RB7488
PPRO298386 PBPRA3495PBPRA1887PBPRA3495PBPRA3494
PMEN399739 PMEN_0965PMEN_2828PMEN_0965PMEN_4143
PLUT319225 PLUT_0344PLUT_0343PLUT_0344PLUT_0343
PFLU220664 PFL_4888PFL_1635PFL_4888PFL_0378PFL_4887
PFLU216595 PFLU1132PFLU4442PFLU1132PFLU0344PFLU1131
PFLU205922 PFL_0339PFL_1533PFL_1534PFL_0340PFL_2003
PCAR338963 PCAR_2345PCAR_1993PCAR_0498PCAR_1993PCAR_1993
PAER208964 PA5125PA1098PA4547PA5124PA2882
PAER208963 PA14_67680PA14_50200PA14_60260PA14_67670PA14_26810
MXAN246197 MXAN_5777MXAN_6865MXAN_4240MXAN_3343MXAN_5785
MSP400668 MMWYL1_0734MMWYL1_4418MMWYL1_0735MMWYL1_4418
MSP266779 MESO_2731MESO_1619MESO_2731MESO_1619
MPET420662 MPE_A2073MPE_A0915MPE_A2074MPE_A2449
MCAP243233 MCA_2541MCA_2847MCA_2541MCA_2542MCA_2542
LINT363253 LI0877LI1078LI1079LI1078LI1078
KPNE272620 GKPORF_B3739GKPORF_B3737GKPORF_B3739GKPORF_B3518GKPORF_B3737
HHAL349124 HHAL_1215HHAL_1893HHAL_1340HHAL_1216HHAL_1216
HCHE349521 HCH_05925HCH_01427HCH_01034HCH_00674
HAUR316274 HAUR_0838HAUR_2367HAUR_4259HAUR_0819
GURA351605 GURA_2678GURA_0915GURA_3375GURA_0915GURA_0494
GSUL243231 GSU_2041GSU_1004GSU_2506GSU_1004GSU_1319
GMET269799 GMET_1397GMET_2562GMET_2034GMET_2562GMET_2454
EFER585054 EFER_3750EFER_0941EFER_3750EFER_3904EFER_3751
ECOO157 HYDGHYDHHYDGGLNLHYDH
ECOL83334 ECS4927ECS4926ECS4927ECS4791ECS4926
ECOL585397 ECED1_2686ECED1_2685ECED1_4711ECED1_4570ECED1_4710
ECOL585057 ECIAI39_2358ECIAI39_2357ECIAI39_4394ECIAI39_3132ECIAI39_4393
ECOL585056 ECUMN_2558ECUMN_2557ECUMN_4528ECUMN_4392ECUMN_4527
ECOL585055 EC55989_4489EC55989_4488EC55989_4489EC55989_4344EC55989_4488
ECOL585035 ECS88_2369ECS88_2368ECS88_4465ECS88_4319ECS88_4464
ECOL585034 ECIAI1_4219ECIAI1_4218ECIAI1_4219ECIAI1_4068ECIAI1_4218
ECOL481805 ECOLC_1430ECOLC_1431ECOLC_4021ECOLC_4147ECOLC_4022
ECOL469008 ECBD_1439ECBD_1440ECBD_4028ECBD_4158ECBD_4029
ECOL439855 ECSMS35_2369ECSMS35_2368ECSMS35_4454ECSMS35_4254ECSMS35_4452
ECOL413997 ECB_02147ECB_02146ECB_03881ECB_03754ECB_03880
ECOL409438 ECSE_4293ECSE_4292ECSE_4293ECSE_4152ECSE_4292
ECOL405955 APECO1_4339APECO1_4340APECO1_2471APECO1_2593APECO1_2472
ECOL364106 UTI89_C2502UTI89_C2501UTI89_C2502UTI89_C4458UTI89_C3816
ECOL362663 ECP_2263ECP_2262ECP_4217ECP_4080ECP_4216
ECOL331111 ECE24377A_4549ECE24377A_4547ECE24377A_4549ECE24377A_4391ECE24377A_4547
ECOL316407 ECK2213:JW2214:B2220ECK2212:JW2213:B2219ECK3996:JW3968:B4004ECK3862:JW3840:B3869ECK3995:JW3967:B4003
ECOL199310 C2763C2762C4962C4818C4961
DVUL882 DVU_3220DVU_3382DVU_3381DVU_3382DVU_3382
DRED349161 DRED_1312DRED_1311DRED_1312DRED_2000DRED_1745
DPSY177439 DP0376DP0375DP1446DP2891DP0375
DOLE96561 DOLE_2807DOLE_0426DOLE_0427DOLE_0426DOLE_0426
DHAF138119 DSY0252DSY4412DSY0252DSY4412DSY2065
DDES207559 DDE_3599DDE_0110DDE_0109DDE_0110DDE_0110
CPRO264201 PC1364PC1365PC1364PC1365PC1365
CHYD246194 CHY_1855CHY_2022CHY_2022CHY_2022
CBEI290402 CBEI_3816CBEI_3818CBEI_3816CBEI_3818CBEI_3818
BVIE269482 BCEP1808_2226BCEP1808_6445BCEP1808_2227BCEP1808_6486
BJAP224911 BLR0257BLR7130BLR4487BLR3485
BHAL272558 BH2948BH1920BH1802BH1920
BCEN331272 BCEN2424_2147BCEN2424_5938BCEN2424_2148BCEN2424_5938
BCEN331271 BCEN_5930BCEN_5574BCEN_5929BCEN_5574
BBAC264462 BD1513BD1512BD1513BD3036BD1512
ASP62928 AZO0735AZO3945AZO2770AZO0736AZO3492
ASAL382245 ASA_4123ASA_3084ASA_4122ASA_3084
AORE350688 CLOS_1079CLOS_1078CLOS_1079CLOS_1078CLOS_1078
AMET293826 AMET_3255AMET_3256AMET_3255AMET_3256AMET_3256
AHYD196024 AHA_0274AHA_3072AHA_0275AHA_3072
AFER243159 AFE_2997AFE_2842AFE_2997AFE_0207AFE_0207
AEHR187272 MLG_0016MLG_1376MLG_0016MLG_0015MLG_0015
ADEH290397 ADEH_1555ADEH_3728ADEH_1555ADEH_1907ADEH_0638
ACAU438753 AZC_1653AZC_1652AZC_1653AZC_3087
ABAC204669 ACID345_0751ACID345_3275ACID345_2604ACID345_0750ACID345_0750


Organism features enriched in list (features available for 98 out of the 101 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 2.192e-6292
Disease:Dysentery 0.000019866
Endospores:No 0.004771825211
GC_Content_Range4:0-40 3.705e-137213
GC_Content_Range4:40-60 5.999e-1065224
GC_Content_Range7:0-30 0.0012342147
GC_Content_Range7:30-40 2.279e-96166
GC_Content_Range7:50-60 6.119e-1548107
Genome_Size_Range5:0-2 1.063e-131155
Genome_Size_Range5:2-4 0.001452221197
Genome_Size_Range5:4-6 8.096e-1362184
Genome_Size_Range5:6-10 0.00942891447
Genome_Size_Range9:1-2 7.077e-111128
Genome_Size_Range9:2-3 0.00021128120
Genome_Size_Range9:4-5 1.471e-73596
Genome_Size_Range9:5-6 0.00020732788
Gram_Stain:Gram_Neg 6.101e-1285333
Gram_Stain:Gram_Pos 6.060e-86150
Habitat:Multiple 0.001630142178
Motility:No 9.160e-104151
Motility:Yes 9.038e-1072267
Oxygen_Req:Aerobic 0.000241517185
Oxygen_Req:Facultative 2.302e-654201
Shape:Coccus 0.0000149282
Shape:Rod 8.349e-779347



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 377
Effective number of orgs (counting one per cluster within 468 clusters): 284

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XFAS405440 ncbi Xylella fastidiosa M121
XFAS183190 ncbi Xylella fastidiosa Temecula11
XFAS160492 ncbi Xylella fastidiosa 9a5c1
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP1755 Thermoanaerobacter sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPEN368408 ncbi Thermofilum pendens Hrk 50
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis1
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170291
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.11
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-31
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OANT439375 ncbi Ochrobactrum anthropi ATCC 491881
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-11
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP290400 ncbi Jannaschia sp. CCS11
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25941
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
DRAD243230 ncbi Deinococcus radiodurans R10
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE451
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1351
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13301
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BOVI236 Brucella ovis1
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHEN283166 ncbi Bartonella henselae Houston-10
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCAN483179 ncbi Brucella canis ATCC 233651
BBUR224326 ncbi Borrelia burgdorferi B311
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo1
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  EG11668   EG11667   EG10482   EG10387   EG10008   
ZMOB264203
XFAS405440 XFASM12_1118
XFAS183190 PD_1020
XFAS160492 XF1849
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TTEN273068 TTE2392
TSP1755 TETH514_0794
TROS309801 TRD_1599
TPSE340099 TETH39_0302
TPEN368408
TLET416591 TLET_0384
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TACI273075
SWOL335541 SWOL_1054
STRO369723
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSAP342451
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SLAC55218 SL1157_2683
SHAE279808
SGOR29390
SERY405948
SEPI176280
SEPI176279
SELO269084
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655 SALA_1276
SAGA211110
SAGA208435
SAGA205921
SACI330779
RXYL266117
RTYP257363
RSPH349102 RSPH17025_1487
RSPH349101 RSPH17029_1457
RSPH272943 RSP_2837
RSP101510
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RPOM246200 SPO_2088
RMAS416276
RFEL315456
RDEN375451 RD1_2764
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PSP312153 PNUC_1254
PRUM264731
PPEN278197
PMUL272843
PMOB403833 PMOB_1628
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591 BDI_0639
PCRY335284 PCRYO_1716
PAST100379
PARS340102
PARC259536
PAER178306
PACN267747
PABY272844
OTSU357244
OANT439375 OANT_2071
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NMUL323848 NMUL_A1161
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MMAG342108 AMB2366
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSAK314315
LREU557436
LPNE400673 LPC_0640
LPNE297246 LPP1176
LPNE297245 LPL1182
LPNE272624 LPG1174
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT267671 LIC_13111
LINT189518 LA3894
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
KRAD266940
JSP290400 JANN_2237
ILOI283942 IL2436
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HDUC233412
HBUT415426
HACI382638
GVIO251221
GOXY290633
GFOR411154 GFO_3053
GBET391165 GBCGDNIH1_1227
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNUC190304
FNOD381764 FNOD_0879
FMAG334413
FJOH376686 FJOH_0638
FALN326424
ERUM302409
ERUM254945
ELIT314225 ELI_06280
EFAE226185
ECHA205920
ECAN269484
DSHI398580 DSHI_1575
DRAD243230
DGEO319795
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP501479 CSE45_1380
CRUT413404
CPNE182082 CPB0610
CPNE138677 CPJ0586
CPNE115713 CPN0586
CPNE115711 CP_0162
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_3203
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHOM360107
CGLU196627
CFET360106
CEFF196164
CDIP257309
CDIF272563
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CACE272562
CABO218497 CAB155
BXEN266265
BTUR314724 BT0763
BTRI382640
BTHE226186 BT_1529
BSUI470137
BSUI204722 BR_1118
BSP107806
BQUI283165
BOVI236 GBOORF1118
BMEL359391 BAB1_1141
BMEL224914 BMEI0865
BLON206672
BHEN283166
BFRA295405 BF1592
BFRA272559
BCIC186490
BCAN483179 BCAN_A1137
BBUR224326 BB_0763
BBAC360095
BAPH372461
BAPH198804
BAFZ390236 BAPKO_0810
BABO262698 BRUAB1_1124
AYEL322098
AVAR240292 AVA_1343
AURANTIMONAS
ASP1667
APLE434271
APLE416269
APHA212042
APER272557
ANAE240017
AMAR329726 AM1_6067
AMAR234826
ALAI441768
AFUL224325
ACEL351607
ABUT367737
AAUR290340


Organism features enriched in list (features available for 353 out of the 377 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00001837392
Arrangment:Clusters 0.00016911717
Disease:Gastroenteritis 0.0053943313
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00376741111
Disease:Wide_range_of_infections 0.00376741111
Endospores:No 1.457e-10163211
Endospores:Yes 0.00722732453
GC_Content_Range4:0-40 1.101e-26187213
GC_Content_Range4:40-60 1.241e-7106224
GC_Content_Range4:60-100 1.268e-859145
GC_Content_Range7:0-30 8.392e-74347
GC_Content_Range7:30-40 8.477e-18144166
GC_Content_Range7:50-60 4.988e-840107
GC_Content_Range7:60-70 9.665e-1149134
Genome_Size_Range5:0-2 2.862e-24143155
Genome_Size_Range5:2-4 1.149e-8150197
Genome_Size_Range5:4-6 4.272e-3544184
Genome_Size_Range5:6-10 0.00008451647
Genome_Size_Range9:0-1 0.00014992527
Genome_Size_Range9:1-2 2.743e-19118128
Genome_Size_Range9:2-3 5.741e-13105120
Genome_Size_Range9:4-5 1.539e-103096
Genome_Size_Range9:5-6 1.017e-201488
Genome_Size_Range9:6-8 8.332e-61038
Gram_Stain:Gram_Neg 7.048e-17154333
Gram_Stain:Gram_Pos 1.148e-8119150
Habitat:Host-associated 1.823e-7153206
Habitat:Multiple 0.000026586178
Habitat:Terrestrial 0.00074661031
Motility:No 2.210e-18134151
Motility:Yes 1.422e-25101267
Optimal_temp.:- 0.0067579143257
Optimal_temp.:25-30 6.231e-6219
Optimal_temp.:30-37 0.00010041818
Optimal_temp.:37 0.000170180106
Oxygen_Req:Anaerobic 0.002000174102
Oxygen_Req:Facultative 0.0000428100201
Pathogenic_in:Human 0.0007634146213
Shape:Coccus 2.114e-137782
Shape:Rod 3.456e-21157347
Shape:Sphere 0.00476201719
Shape:Spiral 0.00918512734



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)176750.4495
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)195780.4357
ECASYN-PWY (enterobacterial common antigen biosynthesis)191770.4348
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45330.4324
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)156680.4293
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)218810.4169
P283-PWY (hydrogen oxidation I (aerobic))78440.4126



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11667   EG10482   EG10387   EG10008   
EG116680.9988710.9996580.9996140.999019
EG116670.998970.9986770.999482
EG104820.9989420.999146
EG103870.999051
EG10008



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PAIRWISE BLAST SCORES:

  EG11668   EG11667   EG10482   EG10387   EG10008   
EG116680.0f0-8.8e-91--
EG11667-0.0f0--1.7e-39
EG104821.3e-94-0.0f0--
EG10387-1.1e-27-0.0f02.5e-24
EG10008-1.6e-32--0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10008 EG10482 (centered at EG10482)
EG10387 (centered at EG10387)
EG11667 EG11668 (centered at EG11668)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11668   EG11667   EG10482   EG10387   EG10008   
185/623161/623171/623251/623148/623
AAEO224324:0:Tyes0-0--
AAVE397945:0:Tyes572-0571-
ABAC204669:0:Tyes12542186700
ABAU360910:0:Tyes0--1-
ABOR393595:0:Tyes0--1262
ACAU438753:0:Tyes1011449-
ACRY349163:8:Tyes--10-
ADEH290397:0:Tyes923312392312830
AEHR187272:0:Tyes11351100
AFER243159:0:Tyes27492596274900
AHYD196024:0:Tyes02738-12738
AMAR329726:9:Tyes----0
AMET293826:0:Tyes01011
AORE350688:0:Tyes10100
ASAL382245:5:Tyes10110-10100
ASP232721:2:Tyes1-23510-
ASP62928:0:Tyes03262207612808
ASP62977:0:Tyes0-01-
ASP76114:2:Tyes01540-1-
AVAR240292:3:Tyes---0-
BABO262698:1:Tno---0-
BAFZ390236:2:Fyes0----
BAMB339670:3:Tno0--1-
BAMB398577:3:Tno0--1-
BAMY326423:0:Tyes-92-00
BANT260799:0:Tno-1195--0
BANT261594:2:Tno-1185--0
BANT568206:2:Tyes-0-00
BANT592021:2:Tno-1266--0
BBAC264462:0:Tyes10114300
BBRO257310:0:Tyes0--1-
BBUR224326:21:Fno0----
BCAN483179:1:Tno---0-
BCEN331271:0:Tno3560-3550
BCEN331272:1:Tyes-0--0
BCEN331272:3:Tyes0--1-
BCER226900:1:Tyes-1727-1210
BCER288681:0:Tno-112-1120
BCER315749:1:Tyes-119-11680
BCER405917:1:Tyes-120-1200
BCER572264:1:Tno-123-1230
BCLA66692:0:Tyes-0--0
BFRA295405:0:Tno---0-
BGAR290434:2:Fyes0-0--
BHAL272558:0:Tyes1158118-0118
BHER314723:0:Fyes0-0--
BJAP224911:0:Fyes-0692142583251
BLIC279010:0:Tyes-148-095
BMAL243160:0:Tno----0
BMAL243160:1:Tno0--1-
BMAL320388:0:Tno----0
BMAL320388:1:Tno0--1-
BMAL320389:0:Tyes----0
BMAL320389:1:Tyes0--1-
BMEL224914:1:Tno---0-
BMEL359391:1:Tno---0-
BOVI236:1:Tyes---0-
BPAR257311:0:Tno0--1-
BPER257313:0:Tyes1--0-
BPET94624:0:Tyes1--0-
BPSE272560:0:Tyes----0
BPSE272560:1:Tyes0--1-
BPSE320372:0:Tno----0
BPSE320372:1:Tno0--1-
BPSE320373:0:Tno----0
BPSE320373:1:Tno0--1-
BPUM315750:0:Tyes-0-430
BSP36773:0:Tyes----0
BSP36773:2:Tyes0--1-
BSP376:0:Tyes0-0589-
BSUB:0:Tyes-0-00
BSUI204722:1:Tyes---0-
BTHA271848:0:Tno----0
BTHA271848:1:Tno1--0-
BTHE226186:0:Tyes0----
BTHU281309:1:Tno-1539-00
BTHU412694:1:Tno-1529-1090
BTUR314724:0:Fyes0----
BVIE269482:5:Tyes--0-41
BVIE269482:7:Tyes0--1-
BWEI315730:3:Tyes-0---
BWEI315730:4:Tyes----0
CABO218497:0:Tyes----0
CAULO:0:Tyes1598-15980-
CBEI290402:0:Tyes01011
CDES477974:0:Tyes-0-00
CFEL264202:1:Tyes2---0
CHUT269798:0:Tyes--0-1603
CHYD246194:0:Tyes0166-166166
CJAP155077:0:Tyes1-10-
CKLU431943:1:Tyes-0---
CPNE115711:1:Tyes0----
CPNE115713:0:Tno0----
CPNE138677:0:Tno0----
CPNE182082:0:Tno0----
CPRO264201:0:Fyes01011
CPSY167879:0:Tyes-0-03121
CSAL290398:0:Tyes--4850-
CSP501479:8:Fyes---0-
CSP78:2:Tyes0-01734-
CTET212717:0:Tyes01---
CVIO243365:0:Tyes1-6500-
DARO159087:0:Tyes0-0842-
DDES207559:0:Tyes35471011
DETH243164:0:Tyes-490-0490
DHAF138119:0:Tyes04204042041845
DNOD246195:0:Tyes0-0--
DOLE96561:0:Tyes24130100
DPSY177439:2:Tyes10111325870
DRED349161:0:Tyes101677428
DSHI398580:5:Tyes---0-
DSP216389:0:Tyes-0--0
DSP255470:0:Tno-867-8670
DVUL882:1:Tyes0161160161161
ECAR218491:0:Tyes0-01-
ECOL199310:0:Tno10216820252167
ECOL316407:0:Tno10103711681038
ECOL331111:6:Tno1481471480147
ECOL362663:0:Tno10194918141948
ECOL364106:1:Tno10119411305
ECOL405955:2:Tyes50189817661897
ECOL409438:6:Tyes1501491500149
ECOL413997:0:Tno10177116371770
ECOL439855:4:Tno10199718071996
ECOL469008:0:Tno01256226992563
ECOL481805:0:Tno01258727192588
ECOL585034:0:Tno1431421430142
ECOL585035:0:Tno10202818912027
ECOL585055:0:Tno1421411420141
ECOL585056:2:Tno10196618271965
ECOL585057:0:Tno1020517882050
ECOL585397:0:Tno10199618551995
ECOL83334:0:Tno1441431440143
ECOLI:0:Tno10180916741808
ECOO157:0:Tno1511501510150
EFER585054:1:Tyes27950279529352796
ELIT314225:0:Tyes---0-
ESP42895:1:Tyes1-10-
FJOH376686:0:Tyes--0--
FNOD381764:0:Tyes-0---
GBET391165:0:Tyes---0-
GFOR411154:0:Tyes--0--
GKAU235909:1:Tyes-0-042
GMET269799:1:Tyes0117065011701068
GSUL243231:0:Tyes1031014960313
GTHE420246:1:Tyes-0-00
GURA351605:0:Tyes217541428634140
HARS204773:0:Tyes1--0-
HAUR316274:2:Tyes191557-34620
HCHE349521:0:Tyes5057-7163420
HHAL349124:0:Tyes067811911
HMOD498761:0:Tyes-1917-0926
HNEP81032:0:Tyes1007-10070-
ILOI283942:0:Tyes---0-
JSP290400:1:Tyes---0-
JSP375286:0:Tyes1--02628
KPNE272620:2:Tyes2001992000199
LCHO395495:0:Tyes3766-03227-
LINT189518:1:Tyes---0-
LINT267671:1:Tno---0-
LINT363253:3:Tyes0201202201201
LPNE272624:0:Tno--0--
LPNE297245:1:Fno--0--
LPNE297246:1:Fyes--0--
LPNE400673:0:Tno--0--
LSPH444177:1:Tyes-0--0
MAQU351348:2:Tyes0-01-
MCAP243233:0:Tyes0290011
MEXT419610:0:Tyes0-067-
MFLA265072:0:Tyes1392-01391-
MLOT266835:2:Tyes2021-20210-
MMAG342108:0:Tyes---0-
MMAR394221:0:Tyes1092-10920-
MPET420662:1:Tyes1152-011531528
MSP266779:3:Tyes1111011110-
MSP400668:0:Tyes03753-13753
MSP409:2:Tyes--02695-
MTHE264732:0:Tyes-0-00
MXAN246197:0:Tyes2357341986802365
NARO279238:0:Tyes126--0-
NEUR228410:0:Tyes-21030--
NEUT335283:2:Tyes0-0--
NHAM323097:2:Tyes---9120
NMUL323848:3:Tyes--0--
NOCE323261:1:Tyes0-0--
NWIN323098:0:Tyes0-0455-
OANT439375:5:Tyes---0-
OCAR504832:0:Tyes--01005-
OIHE221109:0:Tyes-0-00
PAER208963:0:Tyes33451892274633440
PAER208964:0:Tno40770348940761799
PATL342610:0:Tyes1-5790-
PCAR338963:0:Tyes18601508015081508
PCRY335284:1:Tyes---0-
PDIS435591:0:Tyes--0--
PENT384676:0:Tyes03215-1-
PFLU205922:0:Tyes01205120611691
PFLU216595:1:Tyes76739507670766
PFLU220664:0:Tyes44411236444104440
PHAL326442:1:Tyes0-4581-
PING357804:0:Tyes-0-2090-
PLUM243265:0:Fyes0-31341-
PLUT319225:0:Tyes101-0
PMEN399739:0:Tyes0189503224-
PMOB403833:0:Tyes-0---
PNAP365044:8:Tyes0-6051-
PPRO298386:2:Tyes1599015991598-
PPUT160488:0:Tno6720-671-
PPUT351746:0:Tyes34420-3441-
PPUT76869:0:Tno11840-1183-
PSP117:0:Tyes153515341535-0
PSP296591:2:Tyes1--0-
PSP312153:0:Tyes---0-
PSP56811:2:Tyes1--0-
PSTU379731:0:Tyes3279278932790-
PSYR205918:0:Tyes-0-1376-
PSYR223283:2:Tyes1594159315940-
PTHE370438:0:Tyes84384284300
RCAS383372:0:Tyes-0-15283182
RDEN375451:4:Tyes---0-
RETL347834:5:Tyes--15810-
REUT264198:3:Tyes0-9101-
REUT381666:2:Tyes0-8841-
RFER338969:1:Tyes01452401
RLEG216596:6:Tyes--18040-
RMET266264:2:Tyes0--1-
RPAL258594:0:Tyes-036252016-
RPAL316055:0:Tyes-02296960-
RPAL316056:0:Tyes01017471
RPAL316057:0:Tyes-46701192-
RPAL316058:0:Tyes-014102874-
RPOM246200:1:Tyes---0-
RRUB269796:1:Tyes1012920
RSOL267608:0:Tyes--0--
RSOL267608:1:Tyes1--0-
RSP357808:0:Tyes-2242-11120
RSPH272943:4:Tyes---0-
RSPH349101:2:Tno---0-
RSPH349102:5:Tyes---0-
SACI56780:0:Tyes01011
SALA317655:1:Tyes---0-
SBAL399599:3:Tyes-4281-0-
SBAL402882:1:Tno-4117-0-
SBOY300268:1:Tyes01381391138
SDEG203122:0:Tyes0-013335
SDEN318161:0:Tyes--100
SDYS300267:1:Tyes0101411
SENT209261:0:Tno153101521
SENT220341:0:Tno153101521
SENT295319:0:Tno01581591158
SENT321314:2:Tno01621631162
SENT454169:2:Tno01571581157
SFLE198214:0:Tyes1391381390138
SFLE373384:0:Tno4214204210420
SFUM335543:0:Tyes2619170271917
SGLO343509:3:Tyes1-10-
SHAL458817:0:Tyes-0-191191
SHIGELLA:0:Tno0101371
SLAC55218:1:Fyes---0-
SLOI323850:0:Tyes-12110-
SMED366394:3:Tyes1573-15730-
SMEL266834:2:Tyes1360-13600-
SONE211586:1:Tyes-241-0-
SPEA398579:0:Tno---00
SPRO399741:1:Tyes1-10-
SRUB309807:1:Tyes0-0--
SSED425104:0:Tyes-01621630
SSON300269:1:Tyes10180016721799
SSP292414:1:Tyes-0---
SSP292414:2:Tyes---9710
SSP644076:7:Fyes---10180
SSP94122:1:Tyes-3902-0-
STHE292459:0:Tyes138001380-0
STYP99287:1:Tyes01651661165
SWOL335541:0:Tyes----0
TCRU317025:0:Tyes-550130100
TDEN243275:0:Tyes010-1
TDEN292415:0:Tyes0-2731-
TLET416591:0:Tyes-0---
TMAR243274:0:Tyes-0--0
TPAL243276:0:Tyes0-0--
TPET390874:0:Tno-0--0
TPSE340099:0:Tyes-0---
TROS309801:1:Tyes---0-
TSP1755:0:Tyes-0---
TSP28240:0:Tyes-0--0
TTEN273068:0:Tyes-0---
TTUR377629:0:Tyes1-10-
VCHO:0:Tyes1243012431242-
VCHO345073:1:Tno1163011631162-
VEIS391735:1:Tyes1647-01648-
VFIS312309:2:Tyes-135088401350
VPAR223926:1:Tyes-142501-
VVUL196600:2:Tyes-1553-0-
VVUL216895:1:Tno-1600-0-
XAUT78245:1:Tyes01033851
XAXO190486:0:Tyes19-190-
XCAM190485:0:Tyes--10-
XCAM314565:0:Tno--10-
XCAM316273:0:Tno--023-
XCAM487884:0:Tno--10-
XFAS160492:2:Tno---0-
XFAS183190:1:Tyes---0-
XFAS405440:0:Tno---0-
XORY291331:0:Tno0-0282-
XORY342109:0:Tyes0-0254-
XORY360094:0:Tno590-5900-
YENT393305:1:Tyes0-01-
YPES187410:5:Tno1-10-
YPES214092:3:Tno0-01-
YPES349746:2:Tno0-01-
YPES360102:3:Tyes10124650
YPES377628:2:Tno26132614261302614
YPES386656:2:Tno1-10-
YPSE273123:2:Tno12291228122901228
YPSE349747:2:Tno27602761276002761



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