CANDIDATE ID: 764

CANDIDATE ID: 764

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9943110e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11192 (yicC) (b3644)
   Products of gene:
     - EG11192-MONOMER (conserved protein)

- EG10966 (spoT) (b3650)
   Products of gene:
     - SPOT-MONOMER (guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase [multifunctional])
       Reactions:
        pppGpp + H2O  ->  GTP + diphosphate + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)
        ATP + GDP  ->  AMP + ppGpp + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)
        ppGpp + H2O  ->  diphosphate + GDP + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)

- EG10965 (gmk) (b3648)
   Products of gene:
     - GUANYL-KIN-MONOMER (Gmk)
     - GUANYL-KIN-CPLX (deoxyguanylate kinase / guanylate kinase)
       Reactions:
        ATP + dGMP  =  ADP + 2'-deoxyguanosine-5'-diphosphate + H+
        GMP + ATP  =  GDP + ADP + H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6125 (guanosine nucleotides de novo biosynthesis)
         P1-PWY (P1-PWY)

- EG10863 (rph) (b3643)
   Products of gene:
     - EG10863-MONOMER (RNase PH monomer)
     - CPLX0-1081 (RNase PH)
       Reactions:
        a tRNA precursor with a short 3' extension + n phosphate  ->  an uncharged tRNA + n a ribonucleoside diphosphate
         In pathways
         PWY0-1479 (tRNA processing pathway)
        a tRNA precursor with a 5' extension and a short 3' extension + n phosphate  ->  a tRNA precursor with a 5' extension + n a nucleoside diphosphate
         In pathways
         PWY0-1479 (tRNA processing pathway)
        phosphate  =  a nucleoside diphosphate

- EG10004 (dfp) (b3639)
   Products of gene:
     - EG10004-MONOMER (Dfp)
     - CPLX0-341 (fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase)
       Reactions:
        D-4'-phosphopantothenate + L-cysteine + CTP  ->  diphosphate + CMP + R-4'-phosphopantothenoyl-L-cysteine + H+
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)
        R-4'-phosphopantothenoyl-L-cysteine + H+  ->  4'-phosphopantetheine + CO2
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 306
Effective number of orgs (counting one per cluster within 468 clusters): 215

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TERY203124 ncbi Trichodesmium erythraeum IMS1014
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen5
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP94122 ncbi Shewanella sp. ANA-35
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP103690 ncbi Nostoc sp. PCC 71204
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16225
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LINN272626 ncbi Listeria innocua Clip112625
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HNEP81032 Hyphomonas neptunium4
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S854
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255865
FMAG334413 ncbi Finegoldia magna ATCC 293284
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-15
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CTET212717 ncbi Clostridium tetani E884
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPER289380 ncbi Clostridium perfringens SM1015
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CNOV386415 ncbi Clostridium novyi NT4
CKLU431943 ncbi Clostridium kluyveri DSM 5554
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CDIF272563 ncbi Clostridium difficile 6305
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto4
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBOT498213 ncbi Clostridium botulinum B1 str. Okra4
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CAULO ncbi Caulobacter crescentus CB154
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHAL272558 ncbi Bacillus halodurans C-1255
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB505
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAEO224324 ncbi Aquifex aeolicus VF54


Names of the homologs of the genes in the group in each of these orgs
  EG11192   EG10966   EG10965   EG10863   EG10004   
ZMOB264203 ZMO0086ZMO0433ZMO0014ZMO1190
YPSE349747 YPSIP31758_0055YPSIP31758_0039YPSIP31758_0041YPSIP31758_0056YPSIP31758_0060
YPSE273123 YPTB0040YPTB0035YPTB0037YPTB0041YPTB0045
YPES386656 YPDSF_3862YPDSF_3867YPDSF_3865YPDSF_3861YPDSF_3857
YPES377628 YPN_3807YPN_3812YPN_3810YPN_3806YPN_3802
YPES360102 YPA_3499YPA_3504YPA_3502YPA_3498YPA_3494
YPES349746 YPANGOLA_A0048YPANGOLA_A0043YPANGOLA_A0045YPANGOLA_A0049YPANGOLA_A0054
YPES214092 YPO0043YPO0038YPO0040YPO0044YPO0048
YPES187410 Y0098Y0103Y0101Y0097Y0093
YENT393305 YE0057YE0045YE0047YE0058YE0062
XORY360094 XOOORF_4204XOOORF_4200XOOORF_4203XOOORF_4205XOOORF_4882
XORY342109 XOO1041XOO1046XOO1042XOO1040XOO0463
XORY291331 XOO1144XOO1149XOO1145XOO1143XOO0496
XFAS405440 XFASM12_0844XFASM12_1874XFASM12_0843XFASM12_0845XFASM12_0126
XFAS183190 PD_0721PD_1707PD_0720PD_0722PD_0118
XFAS160492 XF1504XF0352XF1503XF1505XF0149
XCAM487884 XCC-B100_0934XCC-B100_0937XCC-B100_0935XCC-B100_0933XCC-B100_4043
XCAM316273 XCAORF_3591XCAORF_3587XCAORF_3590XCAORF_3592XCAORF_0430
XCAM314565 XC_0959XC_0956XC_0958XC_0960XC_3943
XCAM190485 XCC3250XCC3247XCC3249XCC3251XCC3859
XAXO190486 XAC3396XAC3393XAC3395XAC3397XAC3914
XAUT78245 XAUT_3135XAUT_3136XAUT_2535XAUT_0078
VVUL216895 VV1_0833VV1_0852VV1_0850VV1_0832VV1_0828
VVUL196600 VV0278VV0241VV0243VV0279VV0283
VPAR223926 VP0176VP0159VP0161VP0177VP0181
VFIS312309 VF0110VF0104VF0106VF0111VF0125
VEIS391735 VEIS_4159VEIS_4220VEIS_4218VEIS_2654
VCHO345073 VC0395_A2588VC0395_A2282VC0395_A2280VC0395_A2589VC0395_A2595
VCHO VC0209VC2710VC2708VC0210VC0215
TTUR377629 TERTU_0175TERTU_0172TERTU_0174TERTU_0176TERTU_0185
TTEN273068 TTE1513TTE1195TTE1511TTE0618TTE1509
TSP1755 TETH514_1763TETH514_1761TETH514_0551TETH514_1759
TPSE340099 TETH39_1326TETH39_1028TETH39_1324TETH39_1683TETH39_1322
TERY203124 TERY_2653TERY_2834TERY_2089TERY_2643
TDEN292415 TBD_0474TBD_0471TBD_0473TBD_0477TBD_2587
TCRU317025 TCR_2055TCR_2144TCR_2138TCR_1915
SWOL335541 SWOL_1239SWOL_0806SWOL_1237SWOL_0453SWOL_1235
STYP99287 STM3735STM3742STM3740STM3734STM3730
STHE292459 STH1337STH2437STH1339STH343STH1341
SSP94122 SHEWANA3_3778SHEWANA3_3812SHEWANA3_3810SHEWANA3_3777SHEWANA3_3771
SSP321332 CYB_1543CYB_0056CYB_1741CYB_0983
SSP321327 CYA_1944CYA_2697CYA_2643CYA_0161
SSP292414 TM1040_1267TM1040_2565TM1040_1266TM1040_2872TM1040_0458
SSON300269 SSO_3762SSO_3755SSO_3757SSO_3763SSO_3767
SSED425104 SSED_0377SSED_0334SSED_0336SSED_0378SSED_0384
SPRO399741 SPRO_4848SPRO_4869SPRO_4867SPRO_4847SPRO_4843
SPEA398579 SPEA_3845SPEA_3879SPEA_3877SPEA_3844SPEA_3838
SONE211586 SO_4257SO_0359SO_0361SO_4256SO_4249
SMEL266834 SMC00576SMC00577SMC01144SMC01161
SMED366394 SMED_0758SMED_0759SMED_0010SMED_3566
SLOI323850 SHEW_3489SHEW_3499SHEW_3497SHEW_3488SHEW_3482
SLAC55218 SL1157_2860SL1157_1883SL1157_2859SL1157_1093SL1157_0579
SHIGELLA YICCSPOTGMKRPHDFP
SHAL458817 SHAL_0421SHAL_0390SHAL_0392SHAL_0422SHAL_0428
SGLO343509 SG2214SG2223SG2221SG2213SG2209
SFUM335543 SFUM_3632SFUM_2111SFUM_3630SFUM_0467
SFLE373384 SFV_3886SFV_3879SFV_3881SFV_3887SFV_3891
SFLE198214 AAN45130.1AAN45137.1AAN45135.1AAN45129.1AAN45125.1
SENT454169 SEHA_C4061SEHA_C4068SEHA_C4066SEHA_C4060SEHA_C4056
SENT321314 SCH_3658SCH_3666SCH_3664SCH_3657SCH_3653
SENT295319 SPA3587SPA3594SPA3592SPA3586SPA3582
SENT220341 STY4059STY4050STY4052STY4060STY4064
SENT209261 T3783T3776T3778T3784T3788
SDYS300267 SDY_4075SDY_4082SDY_4080SDY_4074SDY_4069
SDEN318161 SDEN_0318SDEN_3435SDEN_3433SDEN_0319SDEN_0325
SDEG203122 SDE_3684SDE_3697SDE_3695SDE_3683SDE_3677
SBOY300268 SBO_3646SBO_3727SBO_3729SBO_3645SBO_3641
SBAL402882 SHEW185_0367SHEW185_0351SHEW185_0353SHEW185_0369SHEW185_0375
SBAL399599 SBAL195_0380SBAL195_0358SBAL195_0360SBAL195_0381SBAL195_0387
SAVE227882 SAV6840SAV6871SAV5170SAV6873
SACI56780 SYN_01278SYN_00904SYN_00902SYN_02177
RSPH349102 RSPH17025_1103RSPH17025_2576RSPH17025_1104RSPH17025_2658RSPH17025_0484
RSPH349101 RSPH17029_1564RSPH17029_0303RSPH17029_1563RSPH17029_2882RSPH17029_2252
RSPH272943 RSP_2920RSP_1670RSP_2919RSP_1221RSP_0599
RSOL267608 RSC2156RSC2153RSC2155RSC2159RSC2461
RRUB269796 RRU_A0428RRU_A1856RRU_A0429RRU_A3641RRU_A3796
RPOM246200 SPO_1944SPO_3203SPO_1945SPO_0008SPO_0408
RPAL316058 RPB_2471RPB_2472RPB_0425RPB_0622
RPAL316057 RPD_2975RPD_2974RPD_0395RPD_0209
RPAL316056 RPC_2304RPC_2635RPC_2305RPC_0325RPC_0380
RPAL316055 RPE_3302RPE_3301RPE_0353RPE_0467
RPAL258594 RPA3070RPA3069RPA0329RPA0081
RMET266264 RMET_0855RMET_0858RMET_0856RMET_0852RMET_2887
RLEG216596 RL1562RL1563RL0380RL0357
RFER338969 RFER_1626RFER_3149RFER_3147RFER_1629RFER_2647
REUT381666 H16_A0952H16_A0955H16_A0953H16_A0949H16_A3048
REUT264198 REUT_A2474REUT_A2471REUT_A2473REUT_A2477REUT_A2747
RETL347834 RHE_CH01447RHE_CH01448RHE_CH00363RHE_CH00342
RDEN375451 RD1_2637RD1_1359RD1_2638RD1_0426RD1_1200
PTHE370438 PTH_1797PTH_1045PTH_1795PTH_0791PTH_1793
PSYR223283 PSPTO_0076PSPTO_0073PSPTO_0075PSPTO_0077PSPTO_0085
PSYR205918 PSYR_0212PSYR_0209PSYR_0211PSYR_0213PSYR_0221
PSTU379731 PST_0462PST_0459PST_0461PST_0463PST_0472
PSP312153 PNUC_1079PNUC_1076PNUC_1078PNUC_1080PNUC_1742
PSP296591 BPRO_1336BPRO_1333BPRO_1335BPRO_1339BPRO_3180
PPUT76869 PPUTGB1_5343PPUTGB1_5350PPUTGB1_5344PPUTGB1_5342PPUTGB1_5336
PPUT351746 PPUT_5203PPUT_5211PPUT_5204PPUT_5202PPUT_5195
PPUT160488 PP_5295PP_5302PP_5296PP_5294PP_5285
PPRO298386 PBPRA0197PBPRA0189PBPRA0191PBPRA0198PBPRA0201
PNAP365044 PNAP_0812PNAP_0809PNAP_0811PNAP_1186
PMUL272843 PM1875PM0920PM0922PM1876PM1153
PMEN399739 PMEN_4387PMEN_4390PMEN_4388PMEN_4386PMEN_4377
PLUM243265 PLU4871PLU0272PLU0274PLU4870PLU4866
PING357804 PING_3652PING_0203PING_3623PING_3479PING_0057
PHAL326442 PSHAA2789PSHAA2793PSHAA2790PSHAA2788PSHAA2644
PFLU220664 PFL_6060PFL_6063PFL_6061PFL_6059PFL_6052
PFLU216595 PFLU5992PFLU5995PFLU5993PFLU5991PFLU5983
PFLU205922 PFL_5548PFL_5551PFL_5549PFL_5547PFL_5540
PENT384676 PSEEN5440PSEEN5447PSEEN5441PSEEN5439PSEEN5432
PCAR338963 PCAR_1284PCAR_1285PCAR_2030PCAR_2011
PATL342610 PATL_4283PATL_0349PATL_0347PATL_4282PATL_0045
PAER208964 PA5335PA5338PA5336PA5334PA5320
PAER208963 PA14_70430PA14_70470PA14_70440PA14_70420PA14_70240
OIHE221109 OB2024OB1502OB2106OB1504
OCAR504832 OCAR_6364OCAR_6363OCAR_4413OCAR_4489
OANT439375 OANT_0575OANT_2636OANT_0576OANT_0182OANT_1319
NWIN323098 NWI_1684NWI_1683NWI_0193NWI_0043
NSP103690 ALL1549ALR0106ALR0069ALL3111
NOCE323261 NOC_0956NOC_1214NOC_1212NOC_2442NOC_2992
NMUL323848 NMUL_A0065NMUL_A0050NMUL_A0052NMUL_A0066NMUL_A2137
NMEN374833 NMCC_0670NMCC_1569NMCC_1571NMCC_1406
NMEN272831 NMC0661NMC1577NMC1579NMC1430NMC1576
NMEN122587 NMA0916NMA1917NMA1919NMA1702NMA1916
NMEN122586 NMB_0711NMB_1659NMB_1661NMB_1499NMB_1658
NHAM323097 NHAM_2349NHAM_2348NHAM_0151NHAM_0051
NGON242231 NGO0286NGO1308NGO1310NGO0958NGO1307
NEUT335283 NEUT_2372NEUT_1601NEUT_0614NEUT_0308NEUT_0783
NEUR228410 NE2472NE0368NE2254NE0276NE1463
NARO279238 SARO_2533SARO_1003SARO_2061SARO_0591
MXAN246197 MXAN_4706MXAN_3204MXAN_4705MXAN_2004MXAN_4395
MTHE264732 MOTH_0890MOTH_1680MOTH_0519MOTH_0893
MSUC221988 MS0253MS1736MS1738MS0252MS1938
MSP409 M446_3194M446_0031M446_3193M446_4253M446_6249
MSP400668 MMWYL1_4362MMWYL1_4386MMWYL1_4384MMWYL1_4361MMWYL1_0623
MSP266779 MESO_1764MESO_1763MESO_4016MESO_4055
MPET420662 MPE_A2708MPE_A2721MPE_A2715MPE_A2705MPE_A2571
MMAG342108 AMB0747AMB2253AMB0748AMB4498AMB0202
MLOT266835 MLR7856MLR7857MLR4622MLR3167
MFLA265072 MFLA_0046MFLA_0050MFLA_0048MFLA_0043MFLA_0314
MEXT419610 MEXT_1999MEXT_3196MEXT_2000MEXT_0401MEXT_3927
MCAP243233 MCA_3026MCA_2023MCA_2975MCA_3024MCA_2784
MAQU351348 MAQU_0549MAQU_0636MAQU_0634MAQU_0548MAQU_3563
LWEL386043 LWE1847LWE1536LWE1846LWE1193LWE1844
LSPH444177 BSPH_1483BSPH_3908BSPH_1484BSPH_4047
LPNE400673 LPC_1495LPC_1492LPC_1494LPC_1496LPC_1990
LPNE297246 LPP1993LPP1990LPP1992LPP1994LPP2552
LPNE297245 LPL1988LPL1985LPL1987LPL1989LPL2408
LPNE272624 LPG2011LPG2009LPG2010LPG2012LPG2488
LMON265669 LMOF2365_1856LMOF2365_1542LMOF2365_1855LMOF2365_1247LMOF2365_1853
LMON169963 LMO1828LMO1523LMO1827LMO1238LMO1825
LINN272626 LIN1942LIN1558LIN1941LIN1201LIN1939
LCHO395495 LCHO_0708LCHO_0731LCHO_0729LCHO_0705LCHO_2645
KPNE272620 GKPORF_B3353GKPORF_B3359GKPORF_B3357GKPORF_B3347GKPORF_B3342
JSP375286 MMA_1329MMA_1326MMA_1328MMA_1332MMA_0826
JSP290400 JANN_2441JANN_0514JANN_2440JANN_0206JANN_0907
ILOI283942 IL2421IL2380IL2382IL2425IL0239
HSOM228400 HSM_0325HSM_0548HSM_0546HSM_0326HSM_0008
HSOM205914 HS_1293HS_1455HS_1457HS_1292HS_0143
HNEP81032 HNE_2154HNE_2153HNE_3315HNE_3268
HMOD498761 HM1_2124HM1_1843HM1_2127HM1_0465HM1_2129
HINF71421 HI_0467HI_1741HI_1743HI_0273HI_0953
HINF374930 CGSHIEE_00655CGSHIEE_03330CGSHIEE_03320CGSHIEE_01685CGSHIEE_07195
HINF281310 NTHI0598NTHI2052NTHI2054NTHI0381NTHI1126
HHAL349124 HHAL_0975HHAL_0969HHAL_0976HHAL_0973HHAL_2299
HDUC233412 HD_0302HD_1924HD_1830HD_0301HD_0733
HCHE349521 HCH_06336HCH_06313HCH_06315HCH_06338HCH_01021
HARS204773 HEAR2129HEAR2132HEAR2130HEAR2126HEAR0843
GURA351605 GURA_3163GURA_3160GURA_3162GURA_2256GURA_2927
GTHE420246 GTNG_1018GTNG_2509GTNG_1020GTNG_2594GTNG_1022
GSUL243231 GSU_2239GSU_2236GSU_2238GSU_1795GSU_1124
GOXY290633 GOX1807GOX0989GOX1282GOX2498
GMET269799 GMET_2328GMET_2325GMET_2327GMET_1876GMET_2673
GKAU235909 GK1165GK2578GK1167GK2666GK1169
FTUL458234 FTA_1501FTA_1478FTA_0378FTA_0854
FTUL418136 FTW_0605FTW_0628FTW_1326FTW_1186
FTUL401614 FTN_1198FTN_0691FTN_0387FTN_1128
FTUL393115 FTF0808FTF1470CFTF0858FTF1147C
FTUL393011 FTH_1376FTH_1353FTH_0352FTH_0802
FTUL351581 FTL_1413FTL_1391FTL_0357FTL_0808
FSUC59374 FSU0386FSU0818FSU1058FSU1185
FRANT SPOTGMKRPHDFP
FPHI484022 FPHI_1489FPHI_1850FPHI_0451FPHI_1904
FNUC190304 FN2034FN1482FN2033FN1851FN0711
FMAG334413 FMG_0655FMG_0810FMG_0657FMG_0659
ESP42895 ENT638_0095ENT638_0089ENT638_0091ENT638_0096ENT638_0100
EFER585054 EFER_3936EFER_3942EFER_3940EFER_3935EFER_3930
EFAE226185 EF_3131EF_1974EF_3127EF_1122
ECOO157 YICCSPOTGMKRPHDFP
ECOL83334 ECS4519ECS4525ECS4523ECS4518ECS4514
ECOL585397 ECED1_4328ECED1_4334ECED1_4332ECED1_4327ECED1_4323
ECOL585057 ECIAI39_4163ECIAI39_4172ECIAI39_4170ECIAI39_4162ECIAI39_4157
ECOL585056 ECUMN_4159ECUMN_4166ECUMN_4164ECUMN_4158ECUMN_4154
ECOL585055 EC55989_4109EC55989_4116EC55989_4114EC55989_4108EC55989_4104
ECOL585035 ECS88_4058ECS88_4065ECS88_4063ECS88_4057ECS88_4053
ECOL585034 ECIAI1_3815ECIAI1_3822ECIAI1_3820ECIAI1_3814ECIAI1_3810
ECOL481805 ECOLC_0067ECOLC_0061ECOLC_0063ECOLC_0068ECOLC_0072
ECOL469008 ECBD_0082ECBD_0075ECBD_0077ECBD_0083ECBD_0087
ECOL439855 ECSMS35_3979ECSMS35_3985ECSMS35_3983ECSMS35_3978ECSMS35_3974
ECOL413997 ECB_03501ECB_03507ECB_03505ECB_03500ECB_03496
ECOL409438 ECSE_3924ECSE_3932ECSE_3930ECSE_3923ECSE_3919
ECOL405955 APECO1_2817APECO1_2811APECO1_2813APECO1_2818APECO1_2822
ECOL364106 UTI89_C4188UTI89_C4195UTI89_C4193UTI89_C4187UTI89_C4183
ECOL362663 ECP_3742ECP_3748ECP_3746ECP_3741ECP_3737
ECOL331111 ECE24377A_4145ECE24377A_4153ECE24377A_4151ECE24377A_4144ECE24377A_4140
ECOL316407 ECK3634:JW3619:B3644ECK3640:JW3625:B3650ECK3638:JW3623:B3648ECK3629:JW5642:B3639
ECOL199310 C4468C4475C4473C4467C4463
ECAR218491 ECA0130ECA0038ECA0040ECA0140ECA0144
DSHI398580 DSHI_1528DSHI_1529DSHI_3463DSHI_2976
DRED349161 DRED_1698DRED_0733DRED_1700DRED_2684DRED_1702
DPSY177439 DP2862DP2860DP1273DP1673
DOLE96561 DOLE_1912DOLE_2057DOLE_1910DOLE_1592
DNOD246195 DNO_0665DNO_0645DNO_0664DNO_0823
DHAF138119 DSY2731DSY2451DSY2729DSY3222DSY2727
DARO159087 DARO_3848DARO_3843DARO_3845DARO_3851DARO_3141
CVIO243365 CV_3850CV_3768CV_3770CV_3847CV_3080
CTET212717 CTC_01215CTC_02199CTC_01216CTC_01217
CSP78 CAUL_2522CAUL_2523CAUL_0167CAUL_5070
CSP501479 CSE45_1805CSE45_0276CSE45_1806CSE45_3415CSE45_4341
CSAL290398 CSAL_3207CSAL_3235CSAL_3233CSAL_3206CSAL_2981
CPSY167879 CPS_0107CPS_4973CPS_4971CPS_0112CPS_0182
CPER289380 CPR_1721CPR_1904CPR_1719CPR_2240CPR_1717
CPER195103 CPF_2003CPF_2193CPF_2001CPF_2536CPF_1999
CPER195102 CPE1750CPE1938CPE1748CPE2254CPE1746
CNOV386415 NT01CX_2251NT01CX_1844NT01CX_2249NT01CX_2247
CKLU431943 CKL_1363CKL_3131CKL_3464CKL_1367
CJAP155077 CJA_0202CJA_3571CJA_3569CJA_0203CJA_3523
CHYD246194 CHY_1490CHY_2223CHY_1488CHY_0314CHY_1486
CDIF272563 CD2589CD2744CD2588CD3308CD2587
CDES477974 DAUD_1599DAUD_0901DAUD_1597DAUD_1505DAUD_1595
CBUR434922 COXBU7E912_1781COXBU7E912_1778COXBU7E912_1780COXBU7E912_1782COXBU7E912_0950
CBUR360115 COXBURSA331_A0406COXBURSA331_A0409COXBURSA331_A0407COXBURSA331_A0405COXBURSA331_A1061
CBUR227377 CBU_0300CBU_0303CBU_0301CBU_0299CBU_0886
CBOT536232 CLM_2816CLM_3464CLM_2814CLM_2812
CBOT515621 CLJ_B2746CLJ_B3324CLJ_B2744CLJ_B2742
CBOT508765 CLL_A1209CLL_A1031CLL_A1211CLL_A0417CLL_A1213
CBOT498213 CLD_2121CLD_1481CLD_2123CLD_2125
CBOT441772 CLI_2577CLI_3118CLI_2575CLI_2573
CBOT441771 CLC_2371CLC_2961CLC_2369CLC_2367
CBOT441770 CLB_2389CLB_3088CLB_2387CLB_2385
CBOT36826 CBO2515CBO3059CBO2513CBO2512
CBEI290402 CBEI_1139CBEI_1540CBEI_1141CBEI_1143
CAULO CC1680CC1681CC0152CC3712
CACE272562 CAC1716CAC2274CAC1718CAC1720
BWEI315730 BCERKBAB4_3696BCERKBAB4_4254BCERKBAB4_4325BCERKBAB4_3692
BVIE269482 BCEP1808_0915BCEP1808_0918BCEP1808_0916BCEP1808_0914BCEP1808_2592
BTHU412694 BALH_3504BALH_3988BALH_4073BALH_3500
BTHU281309 BT9727_3614BT9727_4140BT9727_4218BT9727_3610
BTHA271848 BTH_I1585BTH_I1588BTH_I1586BTH_I1584BTH_I0768
BSUI470137 BSUIS_A0489BSUIS_A0490BSUIS_A0174BSUIS_B1059
BSUI204722 BR_0463BR_0464BR_0173BR_A1064
BSUB BSU15660BSU27600BSU15680BSU28370BSU15700
BSP376 BRADO3316BRADO4468BRADO3317BRADO0173BRADO0077
BSP36773 BCEP18194_A4106BCEP18194_A4109BCEP18194_A4107BCEP18194_A4105BCEP18194_A5846
BPUM315750 BPUM_1465BPUM_2401BPUM_1467BPUM_2491BPUM_1469
BPSE320373 BURPS668_2950BURPS668_2947BURPS668_2949BURPS668_2951BURPS668_0965
BPSE320372 BURPS1710B_A3307BURPS1710B_A3304BURPS1710B_A3306BURPS1710B_A3308BURPS1710B_A1179
BPSE272560 BPSL2564BPSL2561BPSL2563BPSL2565BPSL0904
BPET94624 BPET2267BPET2246BPET2248BPET2268BPET2816
BPER257313 BP1587BP1576BP1578BP1588BP1751
BPAR257311 BPP2996BPP3007BPP3005BPP2995BPP1982
BMEL359391 BAB1_0488BAB1_0489BAB1_0172BAB2_1024
BMEL224914 BMEI1470BMEI1469BMEI1775BMEII0235
BMAL320389 BMA10247_1965BMA10247_1962BMA10247_1964BMA10247_1966BMA10247_2114
BMAL320388 BMASAVP1_A0814BMASAVP1_A0817BMASAVP1_A0815BMASAVP1_A0813BMASAVP1_A2660
BMAL243160 BMA_2097BMA_2094BMA_2096BMA_2098BMA_2244
BLIC279010 BL02291BL01124BL02293BL00312BL02295
BJAP224911 BLR4087BLL5065BLR4088BLL0674BLL0759
BHAL272558 BH2514BH1242BH2512BH3068BH2510
BCER572264 BCA_3973BCA_4518BCA_4596BCA_3969
BCER405917 BCE_3916BCE_4491BCE_4586BCE_3912
BCER315749 BCER98_2525BCER98_3123BCER98_2523BCER98_3202BCER98_2521
BCER288681 BCE33L3632BCE33L4151BCE33L4234BCE33L3628
BCER226900 BC_3871BC_4401BC_4494BC_3867
BCEN331272 BCEN2424_0998BCEN2424_1001BCEN2424_0999BCEN2424_0997BCEN2424_2514
BCEN331271 BCEN_0519BCEN_0522BCEN_0520BCEN_0518BCEN_1903
BCAN483179 BCAN_A0468BCAN_A0469BCAN_A0178BCAN_B1086
BBRO257310 BB2962BB2973BB2971BB2961BB2170
BANT592021 BAA_4035BAA_4654BAA_4033BAA_4732BAA_4031
BANT568206 BAMEG_0620BAMEG_4671BAMEG_4751BAMEG_0624
BANT261594 GBAA4011GBAA4637GBAA4715GBAA4007
BANT260799 BAS3724BAS4302BAS4377BAS3720
BAMY326423 RBAM_015490RBAM_024710RBAM_015510RBAM_025440RBAM_015530
BAMB398577 BAMMC406_0870BAMMC406_0873BAMMC406_0871BAMMC406_0869BAMMC406_2432
BAMB339670 BAMB_0858BAMB_0861BAMB_0859BAMB_0857BAMB_2561
BABO262698 BRUAB1_0485BRUAB1_0486BRUAB1_0169BRUAB2_1004
AVAR240292 AVA_4989AVA_1475AVA_2671AVA_3811
ASP76114 C1A25EBA3497EBA3494C1A232EBA838
ASP62928 AZO3960AZO3951AZO3953AZO3963AZO1138
ASP232721 AJS_0926AJS_0949AJS_0947AJS_0923AJS_1001
ASAL382245 ASA_0100ASA_0034ASA_0036ASA_0101ASA_4230
APLE434271 APJL_0056APJL_1861APJL_0264APJL_0055APJL_2016
APLE416269 APL_0056APL_1825APL_0256APL_0055APL_1969
AORE350688 CLOS_1421CLOS_1714CLOS_1423CLOS_0557CLOS_1425
AMET293826 AMET_2792AMET_2353AMET_2790AMET_0956AMET_2788
AMAR329726 AM1_2514AM1_5497AM1_2854AM1_0110
AHYD196024 AHA_4225AHA_0039AHA_0041AHA_4224AHA_0159
AFER243159 AFE_2476AFE_2473AFE_2475AFE_0758AFE_2675
AEHR187272 MLG_2445MLG_2442MLG_2444MLG_2446MLG_2847
ADEH290397 ADEH_2607ADEH_2550ADEH_2606ADEH_3361ADEH_2372
ACRY349163 ACRY_1448ACRY_0531ACRY_1447ACRY_1664ACRY_1725
ACAU438753 AZC_4317AZC_2000AZC_4318AZC_4289AZC_3913
ABOR393595 ABO_0205ABO_0176ABO_0178ABO_0206ABO_0213
ABAU360910 BAV1937BAV1957BAV1955BAV1936BAV1409
ABAC204669 ACID345_3780ACID345_0175ACID345_3778ACID345_1616ACID345_3776
AAVE397945 AAVE_3582AAVE_3585AAVE_3583AAVE_3579AAVE_1328
AAEO224324 AQ_771AQ_844AQ_924AQ_815


Organism features enriched in list (features available for 289 out of the 306 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.004574667112
Endospores:No 2.157e-2842211
Endospores:Yes 1.167e-74453
GC_Content_Range4:0-40 1.561e-1560213
GC_Content_Range4:40-60 3.767e-6137224
GC_Content_Range4:60-100 0.000091191145
GC_Content_Range7:0-30 0.00497601547
GC_Content_Range7:30-40 2.805e-1245166
GC_Content_Range7:50-60 1.162e-879107
GC_Content_Range7:60-70 3.724e-689134
Genome_Size_Range5:0-2 1.735e-3514155
Genome_Size_Range5:4-6 6.727e-28151184
Genome_Size_Range5:6-10 0.00019063547
Genome_Size_Range9:1-2 2.768e-2514128
Genome_Size_Range9:2-3 0.000265643120
Genome_Size_Range9:4-5 2.511e-127896
Genome_Size_Range9:5-6 2.057e-127388
Genome_Size_Range9:6-8 0.00009643038
Gram_Stain:Gram_Neg 5.137e-20219333
Gram_Stain:Gram_Pos 6.462e-749150
Habitat:Host-associated 2.347e-676206
Habitat:Multiple 9.950e-8117178
Habitat:Specialized 0.00138751653
Habitat:Terrestrial 0.00082992431
Motility:No 9.903e-1732151
Motility:Yes 5.968e-17182267
Optimal_temp.:- 0.0034368142257
Optimal_temp.:25-30 1.190e-61919
Optimal_temp.:30-37 0.0030935318
Optimal_temp.:35-37 0.00009501313
Oxygen_Req:Anaerobic 0.009944241102
Oxygen_Req:Facultative 0.0002337119201
Pathogenic_in:Animal 0.00132484466
Shape:Coccobacillus 0.00466881011
Shape:Coccus 1.262e-91682
Shape:Rod 1.529e-26234347
Shape:Sphere 0.0018140319
Shape:Spiral 0.0000123534
Temp._range:Hyperthermophilic 0.0001936323
Temp._range:Mesophilic 0.0025006247473
Temp._range:Thermophilic 0.00513981035



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 130
Effective number of orgs (counting one per cluster within 468 clusters): 112

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS11
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
STOK273063 ncbi Sulfolobus tokodaii 71
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P21
SMAR399550 ncbi Staphylothermus marinus F11
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
PTOR263820 ncbi Picrophilus torridus DSM 97901
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PHOR70601 ncbi Pyrococcus horikoshii OT31
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PAER178306 ncbi Pyrobaculum aerophilum IM21
PABY272844 ncbi Pyrococcus abyssi GE51
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DRAD243230 ncbi Deinococcus radiodurans R11
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K11
ANAE240017 Actinomyces oris MG11
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ABUT367737 ncbi Arcobacter butzleri RM40180


Names of the homologs of the genes in the group in each of these orgs
  EG11192   EG10966   EG10965   EG10863   EG10004   
WSUC273121 WS0188
WPIP955 WD_0439
WPIP80849 WB_0879
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX2124
TWHI218496 TW0610
TWHI203267 TW622
TVOL273116 TVN0307
TPET390874 TPET_0987
TPEN368408 TPEN_0581
TPAL243276
TMAR243274 TM_1691
TKOD69014 TK1634
TDEN326298
TDEN243275 TDE_1086
TACI273075 TA1293
STOK273063 ST0443
SSP387093 SUN_2210
SSOL273057 SSO0735
SMAR399550 SMAR_0859
SACI330779 SACI_0610
PTOR263820 PTO0394
PMAR167546 P9301ORF_0503
PMAR167542
PMAR167540 PMM0191
PISL384616 PISL_0836
PHOR70601 PH1549
PFUR186497 PF1568
PAST100379
PARS340102 PARS_1937
PAER178306 PAE2207
PABY272844 PAB0420
NSP387092
NSEN222891 NSE_0726
NPHA348780
MTHE349307 MTHE_1362
MTHE187420 MTH683
MSYN262723
MSTA339860 MSP_1251
MSED399549 MSED_0077
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2623
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192 MK0381
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_0199
MBAR269797 MBAR_A2506
MART243272
MAEO419665
MACE188937 MA1776
LINT267671 LIC_11012
LINT189518 LA3084
LBIF456481
LBIF355278
IHOS453591 IGNI_0210
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HBUT415426 HBUT_0571
HACI382638
GVIO251221 GLR2748
ERUM302409
ERUM254945
ECHA205920 ECH_0322
ECAN269484 ECAJ_0681
DRAD243230 DR_1585
CTRA471473 CTLON_0214
CTRA471472 CTL0214
CSUL444179
CPRO264201 PC0660
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161 TC_0230
CMET456442
CMAQ397948 CMAQ_0167
CKOR374847 KCR_1370
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CHOM360107
CFET360106
CFEL264202 CF0252
CCUR360105
CCON360104 CCC13826_0545
CCAV227941
CABO218497
BXEN266265
BSP107806 BU434
BGAR290434 BG0843
BBUR224326 BB_0818
BAPH372461
BAPH198804 BUSG419
BAFZ390236 BAPKO_0871
AYEL322098
AURANTIMONAS
APHA212042 APH_0170
APER272557 APE1447
ANAE240017 ANA_0361
AMAR234826
ALAI441768 ACL_0304
AFUL224325 AF_0493
ABUT367737


Organism features enriched in list (features available for 122 out of the 130 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00318671092
Arrangment:Pairs 0.00001058112
Arrangment:Singles 0.000179877286
Disease:Pharyngitis 3.053e-688
Disease:bronchitis_and_pneumonitis 3.053e-688
Endospores:No 3.576e-1074211
GC_Content_Range4:0-40 5.819e-768213
GC_Content_Range4:60-100 1.619e-710145
GC_Content_Range7:0-30 2.536e-72547
GC_Content_Range7:50-60 0.000810411107
GC_Content_Range7:60-70 1.753e-610134
Genome_Size_Range5:0-2 1.548e-3085155
Genome_Size_Range5:2-4 0.002499729197
Genome_Size_Range5:4-6 2.087e-147184
Genome_Size_Range5:6-10 0.0001321147
Genome_Size_Range9:0-1 6.809e-122227
Genome_Size_Range9:1-2 7.146e-1763128
Genome_Size_Range9:3-4 0.0019722777
Genome_Size_Range9:4-5 0.0000164696
Genome_Size_Range9:5-6 4.285e-9188
Gram_Stain:Gram_Pos 2.858e-143150
Habitat:Host-associated 0.002103556206
Habitat:Multiple 7.286e-913178
Habitat:Specialized 0.00006162353
Optimal_temp.:100 0.008985833
Optimal_temp.:35-40 0.008985833
Optimal_temp.:37 0.004212132106
Optimal_temp.:80 0.008985833
Optimal_temp.:85 0.001843644
Oxygen_Req:Aerobic 0.000823725185
Oxygen_Req:Anaerobic 0.000012738102
Oxygen_Req:Facultative 1.541e-621201
Oxygen_Req:Microaerophilic 0.00002311218
Pathogenic_in:Ruminant 0.008985833
Salinity:Extreme_halophilic 0.005017157
Shape:Irregular_coccus 2.830e-91517
Shape:Pleomorphic 0.001358868
Shape:Rod 9.883e-1930347
Shape:Sphere 3.097e-91619
Shape:Spiral 1.158e-112534
Temp._range:Hyperthermophilic 1.499e-101923
Temp._range:Mesophilic 0.000036683473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462130.6054
PWY-5918 (heme biosynthesis I)2722200.5593
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181900.5582
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951750.5485
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002310.5375
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862230.5317
PWY-5386 (methylglyoxal degradation I)3052310.5215
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491420.5180
PWY-1269 (CMP-KDO biosynthesis I)3252380.5037
PWY-4041 (γ-glutamyl cycle)2792140.4969
TYRFUMCAT-PWY (tyrosine degradation I)1841600.4900
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081740.4891
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162760.4886
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392420.4867
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222780.4858
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251830.4845
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912170.4767
GLUTAMINDEG-PWY (glutamine degradation I)1911620.4748
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482440.4725
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962180.4669
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002200.4668
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831560.4661
PWY-5194 (siroheme biosynthesis)3122240.4544
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911590.4539
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551940.4489
PWY-5913 (TCA cycle variation IV)3012170.4444
PWY-5028 (histidine degradation II)1301200.4436
PWY-6317 (galactose degradation I (Leloir pathway))4642880.4426
PWY0-862 (cis-dodecenoyl biosynthesis)3432370.4423
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902110.4413
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911570.4400
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982610.4379
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491880.4306
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491880.4306
PWY-5340 (sulfate activation for sulfonation)3852540.4289
PROSYN-PWY (proline biosynthesis I)4752900.4277
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292280.4271
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761460.4247
AST-PWY (arginine degradation II (AST pathway))1201110.4239
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652440.4219
PWY-5964 (molybdopterin guanine dinucleotide biosynthesis)2902070.4156
GALACTARDEG-PWY (D-galactarate degradation I)1511290.4108
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561320.4104
ARO-PWY (chorismate biosynthesis I)5102990.4041
GLUCONSUPER-PWY (D-gluconate degradation)2291730.4030
VALDEG-PWY (valine degradation I)2902050.4027



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10966   EG10965   EG10863   EG10004   
EG111920.9994750.9999410.9997150.9995
EG109660.9997190.9993760.998809
EG109650.9993590.999488
EG108630.998929
EG10004



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PAIRWISE BLAST SCORES:

  EG11192   EG10966   EG10965   EG10863   EG10004   
EG111920.0f0----
EG10966-0.0f0---
EG10965--0.0f0--
EG10863---0.0f0-
EG10004----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10863 EG11192 (centered at EG11192)
EG10004 (centered at EG10004)
EG10965 (centered at EG10965)
EG10966 (centered at EG10966)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11192   EG10966   EG10965   EG10863   EG10004   
327/623411/623416/623406/623419/623
AAEO224324:0:Tyes048-10728
AAUR290340:2:Tyes-0-263-
AAVE397945:0:Tyes22142217221522110
ABAC204669:0:Tyes36320363014523628
ABAU360910:0:Tyes5255445425240
ABOR393595:0:Tyes29023037
ACAU438753:0:Tyes23470234823191932
ACEL351607:0:Tyes-47-3930
ACRY349163:8:Tyes915091411311195
ADEH290397:0:Tyes24017923910020
AEHR187272:0:Tyes3024405
AFER243159:0:Tyes16961693169501891
AFUL224325:0:Tyes---0-
AHYD196024:0:Tyes4032024031111
ALAI441768:0:Tyes--0--
AMAR329726:9:Tyes-2371532927070
AMET293826:0:Tyes17951360179301791
ANAE240017:0:Tyes---0-
AORE350688:0:Tyes85911488610863
APER272557:0:Tyes---0-
APHA212042:0:Tyes--0--
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