CANDIDATE ID: 765

CANDIDATE ID: 765

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9941490e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11192 (yicC) (b3644)
   Products of gene:
     - EG11192-MONOMER (conserved protein)

- EG10966 (spoT) (b3650)
   Products of gene:
     - SPOT-MONOMER (guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase [multifunctional])
       Reactions:
        pppGpp + H2O  ->  GTP + diphosphate + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)
        ATP + GDP  ->  AMP + ppGpp + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)
        ppGpp + H2O  ->  diphosphate + GDP + H+
         In pathways
         PPGPPMET-PWY (ppGpp biosynthesis)

- EG10965 (gmk) (b3648)
   Products of gene:
     - GUANYL-KIN-MONOMER (Gmk)
     - GUANYL-KIN-CPLX (deoxyguanylate kinase / guanylate kinase)
       Reactions:
        ATP + dGMP  =  ADP + 2'-deoxyguanosine-5'-diphosphate + H+
        GMP + ATP  =  GDP + ADP + H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6125 (guanosine nucleotides de novo biosynthesis)
         P1-PWY (P1-PWY)

- EG10829 (recG) (b3652)
   Products of gene:
     - EG10829-MONOMER (RecG DNA helicase)
       Reactions:
        a DNA with unresolved recombinational or Holliday junctions, created by RecA  =  a DNA segment

- EG10004 (dfp) (b3639)
   Products of gene:
     - EG10004-MONOMER (Dfp)
     - CPLX0-341 (fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase)
       Reactions:
        D-4'-phosphopantothenate + L-cysteine + CTP  ->  diphosphate + CMP + R-4'-phosphopantothenoyl-L-cysteine + H+
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)
        R-4'-phosphopantothenoyl-L-cysteine + H+  ->  4'-phosphopantetheine + CO2
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 331
Effective number of orgs (counting one per cluster within 468 clusters): 228

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTHE300852 ncbi Thermus thermophilus HB84
TTHE262724 ncbi Thermus thermophilus HB274
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TERY203124 ncbi Trichodesmium erythraeum IMS1014
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP94122 ncbi Shewanella sp. ANA-35
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP292414 ncbi Ruegeria sp. TM10405
SSP1148 ncbi Synechocystis sp. PCC 68034
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
RALB246199 Ruminococcus albus 84
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257454
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMOB403833 ncbi Petrotoga mobilis SJ954
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP103690 ncbi Nostoc sp. PCC 71204
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16225
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LSAK314315 ncbi Lactobacillus sakei sakei 23K4
LREU557436 ncbi Lactobacillus reuteri DSM 200164
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LPLA220668 ncbi Lactobacillus plantarum WCFS14
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82934
LINN272626 ncbi Listeria innocua Clip112625
LCHO395495 ncbi Leptothrix cholodnii SP-65
LCAS321967 ncbi Lactobacillus casei ATCC 3344
LACI272621 ncbi Lactobacillus acidophilus NCFM4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HNEP81032 Hyphomonas neptunium4
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255865
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B14
FMAG334413 ncbi Finegoldia magna ATCC 293284
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-15
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CTET212717 ncbi Clostridium tetani E885
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CNOV386415 ncbi Clostridium novyi NT4
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CDIF272563 ncbi Clostridium difficile 6305
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
CAULO ncbi Caulobacter crescentus CB154
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHAL272558 ncbi Bacillus halodurans C-1255
BCIC186490 Candidatus Baumannia cicadellinicola4
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB505
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAEO224324 ncbi Aquifex aeolicus VF54


Names of the homologs of the genes in the group in each of these orgs
  EG11192   EG10966   EG10965   EG10829   EG10004   
ZMOB264203 ZMO0086ZMO0433ZMO1644ZMO1190
YPSE349747 YPSIP31758_0055YPSIP31758_0039YPSIP31758_0041YPSIP31758_0037YPSIP31758_0060
YPSE273123 YPTB0040YPTB0035YPTB0037YPTB0033YPTB0045
YPES386656 YPDSF_3862YPDSF_3867YPDSF_3865YPDSF_3869YPDSF_3857
YPES377628 YPN_3807YPN_3812YPN_3810YPN_3814YPN_3802
YPES360102 YPA_3499YPA_3504YPA_3502YPA_3506YPA_3494
YPES349746 YPANGOLA_A0048YPANGOLA_A0043YPANGOLA_A0045YPANGOLA_A0041YPANGOLA_A0054
YPES214092 YPO0043YPO0038YPO0040YPO0036YPO0048
YPES187410 Y0098Y0103Y0101Y0105Y0093
YENT393305 YE0057YE0045YE0047YE0043YE0062
XORY360094 XOOORF_4204XOOORF_4200XOOORF_4203XOOORF_4198XOOORF_4882
XORY342109 XOO1041XOO1046XOO1042XOO1048XOO0463
XORY291331 XOO1144XOO1149XOO1145XOO1151XOO0496
XFAS405440 XFASM12_0844XFASM12_1874XFASM12_0843XFASM12_1872XFASM12_0126
XFAS183190 PD_0721PD_1707PD_0720PD_1705PD_0118
XFAS160492 XF1504XF0352XF1503XF0354XF0149
XCAM487884 XCC-B100_0934XCC-B100_0937XCC-B100_0935XCC-B100_0947XCC-B100_4043
XCAM316273 XCAORF_3591XCAORF_3587XCAORF_3590XCAORF_3578XCAORF_0430
XCAM314565 XC_0959XC_0956XC_0958XC_0947XC_3943
XCAM190485 XCC3250XCC3247XCC3249XCC3238XCC3859
XAXO190486 XAC3396XAC3393XAC3395XAC3391XAC3914
XAUT78245 XAUT_3135XAUT_3136XAUT_4415XAUT_0078
VVUL216895 VV1_0833VV1_0852VV1_0850VV1_0855VV1_0828
VVUL196600 VV0278VV0241VV0243VV0239VV0283
VPAR223926 VP0176VP0159VP0161VP0157VP0181
VFIS312309 VF0110VF0104VF0106VF2460VF0125
VEIS391735 VEIS_4159VEIS_4220VEIS_4218VEIS_2335VEIS_2654
VCHO345073 VC0395_A2588VC0395_A2282VC0395_A2280VC0395_A2283VC0395_A2595
VCHO VC0209VC2710VC2708VC2711VC0215
TTUR377629 TERTU_0175TERTU_0172TERTU_0174TERTU_4570TERTU_0185
TTHE300852 TTHA1717TTHA1562TTHA1266TTHA1560
TTHE262724 TT_C1355TT_C1197TT_C0902TT_C1195
TTEN273068 TTE1513TTE1195TTE1511TTE1492TTE1509
TSP1755 TETH514_1763TETH514_1761TETH514_1741TETH514_1759
TPSE340099 TETH39_1326TETH39_1028TETH39_1324TETH39_1305TETH39_1322
TERY203124 TERY_2653TERY_2834TERY_1158TERY_2643
TDEN292415 TBD_0474TBD_0471TBD_0473TBD_0469TBD_2587
TCRU317025 TCR_2055TCR_2144TCR_2138TCR_2153TCR_1915
SWOL335541 SWOL_1239SWOL_0806SWOL_1237SWOL_1235
STYP99287 STM3735STM3742STM3740STM3744STM3730
STHE292459 STH1337STH2437STH1339STH1384STH1341
SSP94122 SHEWANA3_3778SHEWANA3_3812SHEWANA3_3810SHEWANA3_0348SHEWANA3_3771
SSP321332 CYB_1543CYB_0056CYB_2808CYB_0983
SSP321327 CYA_1944CYA_2697CYA_2013CYA_0161
SSP292414 TM1040_1267TM1040_2565TM1040_1266TM1040_1397TM1040_0458
SSP1148 SLR1325SLR1123SLR0020SLL0250
SSON300269 SSO_3762SSO_3755SSO_3757SSO_3753SSO_3767
SSED425104 SSED_0377SSED_0334SSED_0336SSED_0329SSED_0384
SPRO399741 SPRO_4848SPRO_4869SPRO_4867SPRO_4871SPRO_4843
SPEA398579 SPEA_3845SPEA_3879SPEA_3877SPEA_3884SPEA_3838
SONE211586 SO_4257SO_0359SO_0361SO_4364SO_4249
SMEL266834 SMC00576SMC00577SMC00228SMC01161
SMED366394 SMED_0758SMED_0759SMED_1401SMED_3566
SLOI323850 SHEW_3489SHEW_3499SHEW_3497SHEW_3507SHEW_3482
SLAC55218 SL1157_2860SL1157_1883SL1157_2859SL1157_2948SL1157_0579
SHIGELLA YICCSPOTGMKRECGDFP
SHAL458817 SHAL_0421SHAL_0390SHAL_0392SHAL_0385SHAL_0428
SHAE279808 SH1287SH1705SH1687SH1703
SGLO343509 SG2214SG2223SG2221SG2224SG2209
SFUM335543 SFUM_3632SFUM_2111SFUM_3630SFUM_0467
SFLE373384 SFV_3886SFV_3879SFV_3881SFV_3877SFV_3891
SFLE198214 AAN45130.1AAN45137.1AAN45135.1AAN45139.1AAN45125.1
SENT454169 SEHA_C4061SEHA_C4068SEHA_C4066SEHA_C4070SEHA_C4056
SENT321314 SCH_3658SCH_3666SCH_3664SCH_3668SCH_3653
SENT295319 SPA3587SPA3594SPA3592SPA3596SPA3582
SENT220341 STY4059STY4050STY4052STY4048STY4064
SENT209261 T3783T3776T3778T3774T3788
SDYS300267 SDY_4075SDY_4082SDY_4080SDY_4084SDY_4069
SDEN318161 SDEN_0318SDEN_3435SDEN_3433SDEN_3476SDEN_0325
SDEG203122 SDE_3684SDE_3697SDE_3695SDE_3717SDE_3677
SBOY300268 SBO_3646SBO_3727SBO_3729SBO_3725SBO_3641
SBAL402882 SHEW185_0367SHEW185_0351SHEW185_0353SHEW185_0344SHEW185_0375
SBAL399599 SBAL195_0380SBAL195_0358SBAL195_0360SBAL195_0351SBAL195_0387
SAUR93062 SACOL1689SACOL1221SACOL1241SACOL1223
SAUR93061 SAOUHSC_01742SAOUHSC_01176SAOUHSC_01194SAOUHSC_01178
SAUR426430 NWMN_1536NWMN_1120NWMN_1137NWMN_1121
SAUR418127 SAHV_1621SAHV_1199SAHV_1217SAHV_1201
SAUR367830 SAUSA300_1590SAUSA300_1102SAUSA300_1120SAUSA300_1104
SAUR359787 SAURJH1_1724SAURJH1_1293SAURJH1_1311SAURJH1_1295
SAUR359786 SAURJH9_1691SAURJH9_1268SAURJH9_1286SAURJH9_1270
SAUR282459 SAS1570SAS1143SAS1161SAS1145
SAUR282458 SAR1714SAR1185SAR1203SAR1187
SAUR273036 SAB1503CSAB1073SAB1091SAB1075
SAUR196620 MW1584MW1092MW1110MW1094
SAUR158879 SA1460SA1052SA1070SA1054
SAUR158878 SAV1634SAV1209SAV1227SAV1211
RSPH349102 RSPH17025_1103RSPH17025_2576RSPH17025_1104RSPH17025_1160RSPH17025_0484
RSPH349101 RSPH17029_1564RSPH17029_0303RSPH17029_1563RSPH17029_1281RSPH17029_2252
RSPH272943 RSP_2920RSP_1670RSP_2919RSP_2623NRSP_0599
RSOL267608 RSC2156RSC2153RSC2155RSC2711RSC2461
RRUB269796 RRU_A0428RRU_A1856RRU_A0429RRU_A1728RRU_A3796
RPOM246200 SPO_1944SPO_3203SPO_1945SPO_1681SPO_0408
RPAL316058 RPB_2471RPB_2472RPB_2852RPB_0622
RPAL316057 RPD_2975RPD_2974RPD_2620RPD_0209
RPAL316056 RPC_2304RPC_2635RPC_2305RPC_2608RPC_0380
RPAL316055 RPE_3302RPE_3301RPE_2788RPE_0467
RPAL258594 RPA3070RPA3069RPA2662RPA0081
RMET266264 RMET_0855RMET_0858RMET_0856RMET_2942RMET_2887
RLEG216596 RL1562RL1563RL2384RL0357
RFER338969 RFER_1626RFER_3149RFER_3147RFER_3688RFER_2647
REUT381666 H16_A0952H16_A0955H16_A0953H16_A3111H16_A3048
REUT264198 REUT_A2474REUT_A2471REUT_A2473REUT_A2806REUT_A2747
RETL347834 RHE_CH01447RHE_CH01448RHE_CH02093RHE_CH00342
RDEN375451 RD1_2637RD1_1359RD1_2638RD1_2604RD1_1200
RALB246199 GRAORF_1837GRAORF_1839GRAORF_3442GRAORF_3948
PTHE370438 PTH_1797PTH_1045PTH_1795PTH_1757PTH_1793
PSYR223283 PSPTO_0076PSPTO_0073PSPTO_0075PSPTO_0065PSPTO_0085
PSYR205918 PSYR_0212PSYR_0209PSYR_0211PSYR_0201PSYR_0221
PSTU379731 PST_0462PST_0459PST_0461PST_0135PST_0472
PSP312153 PNUC_1079PNUC_1076PNUC_1078PNUC_1787PNUC_1742
PSP296591 BPRO_1336BPRO_1333BPRO_1335BPRO_0468BPRO_3180
PPUT76869 PPUTGB1_5343PPUTGB1_5350PPUTGB1_5344PPUTGB1_5358PPUTGB1_5336
PPUT351746 PPUT_5203PPUT_5211PPUT_5204PPUT_5219PPUT_5195
PPUT160488 PP_5295PP_5302PP_5296PP_5310PP_5285
PPRO298386 PBPRA0197PBPRA0189PBPRA0191PBPRA0187PBPRA0201
PPEN278197 PEPE_1120PEPE_0825PEPE_0839PEPE_0827
PNAP365044 PNAP_0812PNAP_0809PNAP_0811PNAP_0322PNAP_1186
PMUL272843 PM1875PM0920PM0922PM0919PM1153
PMOB403833 PMOB_0098PMOB_0100PMOB_0196PMOB_0591
PMEN399739 PMEN_4387PMEN_4390PMEN_4388PMEN_4397PMEN_4377
PLUM243265 PLU4871PLU0272PLU0274PLU0259PLU4866
PING357804 PING_3652PING_0203PING_3623PING_3492PING_0057
PHAL326442 PSHAA2789PSHAA2793PSHAA2790PSHAA2799PSHAA2644
PFLU220664 PFL_6060PFL_6063PFL_6061PFL_6071PFL_6052
PFLU216595 PFLU5992PFLU5995PFLU5993PFLU6003PFLU5983
PFLU205922 PFL_5548PFL_5551PFL_5549PFL_5559PFL_5540
PENT384676 PSEEN5440PSEEN5447PSEEN5441PSEEN5455PSEEN5432
PCAR338963 PCAR_1284PCAR_1285PCAR_1609PCAR_2011
PATL342610 PATL_4283PATL_0349PATL_0347PATL_0353PATL_0045
PAER208964 PA5335PA5338PA5336PA5345PA5320
PAER208963 PA14_70430PA14_70470PA14_70440PA14_70570PA14_70240
OIHE221109 OB2024OB1502OB1520OB1504
OCAR504832 OCAR_6364OCAR_6363OCAR_6213OCAR_4489
OANT439375 OANT_0575OANT_2636OANT_0576OANT_3642OANT_1319
NWIN323098 NWI_1684NWI_1683NWI_1515NWI_0043
NSP103690 ALL1549ALR0106ALL4789ALL3111
NOCE323261 NOC_0956NOC_1214NOC_1212NOC_1216NOC_2992
NMUL323848 NMUL_A0065NMUL_A0050NMUL_A0052NMUL_A0884NMUL_A2137
NMEN374833 NMCC_0670NMCC_1569NMCC_1571NMCC_0438
NMEN272831 NMC0661NMC1577NMC1579NMC0433NMC1576
NMEN122587 NMA0916NMA1917NMA1919NMA0675NMA1916
NMEN122586 NMB_0711NMB_1659NMB_1661NMB_1788NMB_1658
NHAM323097 NHAM_2349NHAM_2348NHAM_2055NHAM_0051
NGON242231 NGO0286NGO1308NGO1310NGO0117NGO1307
NEUT335283 NEUT_2372NEUT_1601NEUT_0614NEUT_1558NEUT_0783
NEUR228410 NE2472NE0368NE2254NE1850NE1463
NARO279238 SARO_2533SARO_1003SARO_1979SARO_0591
MXAN246197 MXAN_4706MXAN_3204MXAN_4705MXAN_3406MXAN_4395
MTHE264732 MOTH_0890MOTH_1680MOTH_0923MOTH_0893
MSUC221988 MS0253MS1736MS1738MS1735MS1938
MSP409 M446_3194M446_0031M446_3193M446_6310M446_6249
MSP400668 MMWYL1_4362MMWYL1_4386MMWYL1_4384MMWYL1_4390MMWYL1_0623
MSP266779 MESO_1764MESO_1763MESO_1704MESO_4055
MPET420662 MPE_A2708MPE_A2721MPE_A2715MPE_A3737MPE_A2571
MMAG342108 AMB0747AMB2253AMB0748AMB2467AMB0202
MLOT266835 MLR7856MLR7857MLR0830MLR3167
MFLA265072 MFLA_0046MFLA_0050MFLA_0048MFLA_0052MFLA_0314
MEXT419610 MEXT_1999MEXT_3196MEXT_2000MEXT_4161MEXT_3927
MCAP243233 MCA_3026MCA_2023MCA_2975MCA_2025MCA_2784
MAQU351348 MAQU_0549MAQU_0636MAQU_0634MAQU_0640MAQU_3563
LWEL386043 LWE1847LWE1536LWE1846LWE1830LWE1844
LSPH444177 BSPH_1483BSPH_3908BSPH_1484BSPH_1514
LSAK314315 LSA0737LSA0685LSA0699LSA0687
LREU557436 LREU_0721LREU_1176LREU_1162LREU_1174
LPNE400673 LPC_1495LPC_1492LPC_1494LPC_1518LPC_1990
LPNE297246 LPP1993LPP1990LPP1992LPP2015LPP2552
LPNE297245 LPL1988LPL1985LPL1987LPL2010LPL2408
LPNE272624 LPG2011LPG2009LPG2010LPG2033LPG2488
LPLA220668 LP_1987LP_1612LP_1627LP_1614
LMON265669 LMOF2365_1856LMOF2365_1542LMOF2365_1855LMOF2365_1839LMOF2365_1853
LMON169963 LMO1828LMO1523LMO1827LMO1811LMO1825
LMES203120 LEUM_1367LEUM_1713LEUM_0536LEUM_1217
LINN272626 LIN1942LIN1558LIN1941LIN1925LIN1939
LCHO395495 LCHO_0708LCHO_0731LCHO_0729LCHO_1580LCHO_2645
LCAS321967 LSEI_1539LSEI_1629LSEI_1615LSEI_1627
LACI272621 LBA0932LBA1325LBA1309LBA0939
KPNE272620 GKPORF_B3353GKPORF_B3359GKPORF_B3357GKPORF_B3361GKPORF_B3342
JSP375286 MMA_1329MMA_1326MMA_1328MMA_0349MMA_0826
JSP290400 JANN_2441JANN_0514JANN_2440JANN_2503JANN_0907
ILOI283942 IL2421IL2380IL2382IL2374IL0239
HSOM228400 HSM_0325HSM_0548HSM_0546HSM_0549HSM_0008
HSOM205914 HS_1293HS_1455HS_1457HS_1454HS_0143
HNEP81032 HNE_2154HNE_2153HNE_1987HNE_3268
HMOD498761 HM1_2124HM1_1843HM1_2127HM1_2150HM1_2129
HINF71421 HI_0467HI_1741HI_1743HI_1740HI_0953
HINF374930 CGSHIEE_00655CGSHIEE_03330CGSHIEE_03320CGSHIEE_03335CGSHIEE_07195
HINF281310 NTHI0598NTHI2052NTHI2054NTHI2051NTHI1126
HHAL349124 HHAL_0975HHAL_0969HHAL_0976HHAL_0967HHAL_2299
HDUC233412 HD_0302HD_1924HD_1830HD_1921HD_0733
HCHE349521 HCH_06336HCH_06313HCH_06315HCH_06309HCH_01021
HARS204773 HEAR2129HEAR2132HEAR2130HEAR0301HEAR0843
GURA351605 GURA_3163GURA_3160GURA_3162GURA_1869GURA_2927
GTHE420246 GTNG_1018GTNG_2509GTNG_1020GTNG_1038GTNG_1022
GSUL243231 GSU_2239GSU_2236GSU_2238GSU_1326GSU_1124
GOXY290633 GOX1807GOX0989GOX0056GOX2498
GMET269799 GMET_2328GMET_2325GMET_2327GMET_1777GMET_2673
GKAU235909 GK1165GK2578GK1167GK1186GK1169
FTUL458234 FTA_1501FTA_1478FTA_0553FTA_0854
FTUL418136 FTW_0605FTW_0628FTW_0333FTW_1186
FTUL401614 FTN_1198FTN_0691FTN_0335FTN_1128
FTUL393115 FTF0808FTF1470CFTF1601CFTF1147C
FTUL393011 FTH_1376FTH_1353FTH_0521FTH_0802
FTUL351581 FTL_1413FTL_1391FTL_0524FTL_0808
FRANT SPOTGMKRECGDFP
FPHI484022 FPHI_1489FPHI_1850FPHI_0490FPHI_1904
FNUC190304 FN2034FN1482FN2033FN1660FN0711
FNOD381764 FNOD_1679FNOD_1677FNOD_1019FNOD_1467
FMAG334413 FMG_0655FMG_0810FMG_0657FMG_0659
ESP42895 ENT638_0095ENT638_0089ENT638_0091ENT638_0087ENT638_0100
EFER585054 EFER_3936EFER_3942EFER_3940EFER_3944EFER_3930
EFAE226185 EF_3131EF_1974EF_3127EF_3113
ECOO157 YICCSPOTGMKRECGDFP
ECOL83334 ECS4519ECS4525ECS4523ECS4527ECS4514
ECOL585397 ECED1_4328ECED1_4334ECED1_4332ECED1_4336ECED1_4323
ECOL585057 ECIAI39_4163ECIAI39_4172ECIAI39_4170ECIAI39_4174ECIAI39_4157
ECOL585056 ECUMN_4159ECUMN_4166ECUMN_4164ECUMN_4168ECUMN_4154
ECOL585055 EC55989_4109EC55989_4116EC55989_4114EC55989_4118EC55989_4104
ECOL585035 ECS88_4058ECS88_4065ECS88_4063ECS88_4067ECS88_4053
ECOL585034 ECIAI1_3815ECIAI1_3822ECIAI1_3820ECIAI1_3824ECIAI1_3810
ECOL481805 ECOLC_0067ECOLC_0061ECOLC_0063ECOLC_0059ECOLC_0072
ECOL469008 ECBD_0082ECBD_0075ECBD_0077ECBD_0073ECBD_0087
ECOL439855 ECSMS35_3979ECSMS35_3985ECSMS35_3983ECSMS35_3987ECSMS35_3974
ECOL413997 ECB_03501ECB_03507ECB_03505ECB_03509ECB_03496
ECOL409438 ECSE_3924ECSE_3932ECSE_3930ECSE_3934ECSE_3919
ECOL405955 APECO1_2817APECO1_2811APECO1_2813APECO1_2809APECO1_2822
ECOL364106 UTI89_C4188UTI89_C4195UTI89_C4193UTI89_C4197UTI89_C4183
ECOL362663 ECP_3742ECP_3748ECP_3746ECP_3750ECP_3737
ECOL331111 ECE24377A_4145ECE24377A_4153ECE24377A_4151ECE24377A_4156ECE24377A_4140
ECOL316407 ECK3634:JW3619:B3644ECK3640:JW3625:B3650ECK3638:JW3623:B3648ECK3642:JW3627:B3652ECK3629:JW5642:B3639
ECOL199310 C4468C4475C4473C4477C4463
ECAR218491 ECA0130ECA0038ECA0040ECA0036ECA0144
DSHI398580 DSHI_1528DSHI_1529DSHI_1510DSHI_2976
DRED349161 DRED_1698DRED_0733DRED_1700DRED_2088DRED_1702
DOLE96561 DOLE_1912DOLE_2057DOLE_1910DOLE_1592
DNOD246195 DNO_0665DNO_0645DNO_1018DNO_0823
DHAF138119 DSY2731DSY2451DSY2729DSY2674DSY2727
DARO159087 DARO_3848DARO_3843DARO_3845DARO_0356DARO_3141
CVIO243365 CV_3850CV_3768CV_3770CV_0933CV_3080
CVES412965 COSY_0471COSY_0513COSY_0835COSY_0727
CTET212717 CTC_01215CTC_02199CTC_01216CTC_01231CTC_01217
CSP78 CAUL_2522CAUL_2523CAUL_2912CAUL_5070
CSP501479 CSE45_1805CSE45_0276CSE45_1806CSE45_1363CSE45_4341
CSAL290398 CSAL_3207CSAL_3235CSAL_3233CSAL_3245CSAL_2981
CRUT413404 RMAG_0513RMAG_0559RMAG_0928RMAG_0801
CPSY167879 CPS_0107CPS_4973CPS_4971CPS_4976CPS_0182
CPER289380 CPR_1721CPR_1904CPR_1719CPR_1717
CPER195103 CPF_2003CPF_2193CPF_2001CPF_1984CPF_1999
CPER195102 CPE1750CPE1938CPE1748CPE1731CPE1746
CNOV386415 NT01CX_2251NT01CX_1844NT01CX_2249NT01CX_2247
CJAP155077 CJA_0202CJA_3571CJA_3569CJA_3491CJA_3523
CHYD246194 CHY_1490CHY_2223CHY_1488CHY_1468CHY_1486
CDIF272563 CD2589CD2744CD2588CD2560CD2587
CDES477974 DAUD_1599DAUD_0901DAUD_1597DAUD_1595
CBUR434922 COXBU7E912_1781COXBU7E912_1778COXBU7E912_1780COXBU7E912_1776COXBU7E912_0950
CBUR360115 COXBURSA331_A0406COXBURSA331_A0409COXBURSA331_A0407COXBURSA331_A0411COXBURSA331_A1061
CBUR227377 CBU_0300CBU_0303CBU_0301CBU_0305CBU_0886
CBOT536232 CLM_2816CLM_3464CLM_2814CLM_2795CLM_2812
CBOT515621 CLJ_B2746CLJ_B3324CLJ_B2744CLJ_B2725CLJ_B2742
CBOT508765 CLL_A1209CLL_A1031CLL_A1211CLL_A1228CLL_A1213
CBOT498213 CLD_2121CLD_1481CLD_2123CLD_2142CLD_2125
CBOT441772 CLI_2577CLI_3118CLI_2575CLI_2556CLI_2573
CBOT441771 CLC_2371CLC_2961CLC_2369CLC_2350CLC_2367
CBOT441770 CLB_2389CLB_3088CLB_2387CLB_2368CLB_2385
CBOT36826 CBO2515CBO3059CBO2513CBO2496CBO2512
CBEI290402 CBEI_1139CBEI_1540CBEI_1141CBEI_1158CBEI_1143
CAULO CC1680CC1681CC1437CC3712
CACE272562 CAC1716CAC2274CAC1718CAC1736CAC1720
BWEI315730 BCERKBAB4_3696BCERKBAB4_4254BCERKBAB4_3678BCERKBAB4_3692
BVIE269482 BCEP1808_0915BCEP1808_0918BCEP1808_0916BCEP1808_0685BCEP1808_2592
BTHU412694 BALH_3504BALH_3988BALH_3486BALH_3500
BTHU281309 BT9727_3614BT9727_4140BT9727_3596BT9727_3610
BTHA271848 BTH_I1585BTH_I1588BTH_I1586BTH_I1280BTH_I0768
BSUI470137 BSUIS_A0489BSUIS_A0490BSUIS_B0577BSUIS_B1059
BSUI204722 BR_0463BR_0464BR_A0581BR_A1064
BSUB BSU15660BSU27600BSU15680BSU15870BSU15700
BSP376 BRADO3316BRADO4468BRADO3317BRADO3769BRADO0077
BSP36773 BCEP18194_A4106BCEP18194_A4109BCEP18194_A4107BCEP18194_A3812BCEP18194_A5846
BPUM315750 BPUM_1465BPUM_2401BPUM_1467BPUM_1486BPUM_1469
BPSE320373 BURPS668_2950BURPS668_2947BURPS668_2949BURPS668_3325BURPS668_0965
BPSE320372 BURPS1710B_A3307BURPS1710B_A3304BURPS1710B_A3306BURPS1710B_A3643BURPS1710B_A1179
BPSE272560 BPSL2564BPSL2561BPSL2563BPSL2867BPSL0904
BPET94624 BPET2267BPET2246BPET2248BPET2290BPET2816
BPER257313 BP1587BP1576BP1578BP1612BP1751
BPAR257311 BPP2996BPP3007BPP3005BPP2973BPP1982
BMEL359391 BAB1_0488BAB1_0489BAB2_0659BAB2_1024
BMEL224914 BMEI1470BMEI1469BMEII0686BMEII0235
BMAL320389 BMA10247_1965BMA10247_1962BMA10247_1964BMA10247_2575BMA10247_2114
BMAL320388 BMASAVP1_A0814BMASAVP1_A0817BMASAVP1_A0815BMASAVP1_A0306BMASAVP1_A2660
BMAL243160 BMA_2097BMA_2094BMA_2096BMA_2389BMA_2244
BLIC279010 BL02291BL01124BL02293BL02311BL02295
BJAP224911 BLR4087BLL5065BLR4088BLR4603BLL0759
BHAL272558 BH2514BH1242BH2512BH2495BH2510
BCIC186490 BCI_0180BCI_0110BCI_0112BCI_0183
BCER572264 BCA_3973BCA_4518BCA_3955BCA_3969
BCER405917 BCE_3916BCE_4491BCE_3897BCE_3912
BCER315749 BCER98_2525BCER98_3123BCER98_2523BCER98_2507BCER98_2521
BCER288681 BCE33L3632BCE33L4151BCE33L3614BCE33L3628
BCER226900 BC_3871BC_4401BC_3853BC_3867
BCEN331272 BCEN2424_0998BCEN2424_1001BCEN2424_0999BCEN2424_0724BCEN2424_2514
BCEN331271 BCEN_0519BCEN_0522BCEN_0520BCEN_0240BCEN_1903
BCAN483179 BCAN_A0468BCAN_A0469BCAN_B0581BCAN_B1086
BBRO257310 BB2962BB2973BB2971BB2939BB2170
BANT592021 BAA_4035BAA_4654BAA_4033BAA_4017BAA_4031
BANT568206 BAMEG_0620BAMEG_4671BAMEG_0638BAMEG_0624
BANT261594 GBAA4011GBAA4637GBAA3993GBAA4007
BANT260799 BAS3724BAS4302BAS3706BAS3720
BAMY326423 RBAM_015490RBAM_024710RBAM_015510RBAM_015700RBAM_015530
BAMB398577 BAMMC406_0870BAMMC406_0873BAMMC406_0871BAMMC406_0639BAMMC406_2432
BAMB339670 BAMB_0858BAMB_0861BAMB_0859BAMB_0614BAMB_2561
BABO262698 BRUAB1_0485BRUAB1_0486BRUAB2_0643BRUAB2_1004
AVAR240292 AVA_4989AVA_1475AVA_2058AVA_3811
ASP76114 C1A25EBA3497EBA3494EBA2297EBA838
ASP62928 AZO3960AZO3951AZO3953AZO0477AZO1138
ASP232721 AJS_0926AJS_0949AJS_0947AJS_0376AJS_1001
ASAL382245 ASA_0100ASA_0034ASA_0036ASA_4113ASA_4230
APLE434271 APJL_0056APJL_1861APJL_0264APJL_1863APJL_2016
APLE416269 APL_0056APL_1825APL_0256APL_1827APL_1969
AORE350688 CLOS_1421CLOS_1714CLOS_1423CLOS_1441CLOS_1425
AMET293826 AMET_2792AMET_2353AMET_2790AMET_2770AMET_2788
AMAR329726 AM1_2514AM1_5497AM1_5225AM1_0110
AHYD196024 AHA_4225AHA_0039AHA_0041AHA_0284AHA_0159
AFER243159 AFE_2476AFE_2473AFE_2475AFE_2470AFE_2675
AEHR187272 MLG_2445MLG_2442MLG_2444MLG_2440MLG_2847
ADEH290397 ADEH_2607ADEH_2550ADEH_2606ADEH_1727ADEH_2372
ACRY349163 ACRY_1448ACRY_0531ACRY_1447ACRY_1725
ACAU438753 AZC_4317AZC_2000AZC_4318AZC_1725AZC_3913
ABOR393595 ABO_0205ABO_0176ABO_0178ABO_0168ABO_0213
ABAU360910 BAV1937BAV1957BAV1955BAV1920BAV1409
ABAC204669 ACID345_3780ACID345_0175ACID345_3778ACID345_4522ACID345_3776
AAVE397945 AAVE_3582AAVE_3585AAVE_3583AAVE_0593AAVE_1328
AAEO224324 AQ_771AQ_844AQ_2053AQ_815


Organism features enriched in list (features available for 311 out of the 331 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 1.033e-682112
Endospores:No 2.384e-2257211
Endospores:Yes 0.00003084253
GC_Content_Range4:0-40 3.278e-980213
GC_Content_Range4:40-60 0.0002629139224
GC_Content_Range4:60-100 0.001441092145
GC_Content_Range7:0-30 0.00110001547
GC_Content_Range7:30-40 6.215e-665166
GC_Content_Range7:50-60 2.769e-678107
GC_Content_Range7:60-70 0.000042991134
GC_Content_Range7:70-100 0.0026669111
Genome_Size_Range5:0-2 4.936e-3321155
Genome_Size_Range5:4-6 1.383e-21150184
Genome_Size_Range5:6-10 0.00283783447
Genome_Size_Range9:0-1 1.903e-8127
Genome_Size_Range9:1-2 2.414e-2320128
Genome_Size_Range9:4-5 1.972e-97796
Genome_Size_Range9:5-6 2.846e-107388
Genome_Size_Range9:6-8 0.00051983038
Gram_Stain:Gram_Neg 6.251e-12218333
Gram_Stain:Gram_Pos 0.003607867150
Habitat:Host-associated 0.000097289206
Habitat:Multiple 1.014e-6121178
Habitat:Specialized 0.00325981953
Habitat:Terrestrial 0.00299002431
Motility:No 5.377e-1343151
Motility:Yes 5.938e-12183267
Optimal_temp.:25-30 5.010e-61919
Optimal_temp.:30-37 0.00611131518
Optimal_temp.:35-37 0.00025141313
Optimal_temp.:37 0.002278444106
Oxygen_Req:Anaerobic 0.000624040102
Oxygen_Req:Facultative 3.004e-8138201
Pathogenic_in:Animal 0.00033554866
Shape:Coccobacillus 0.00909791011
Shape:Coccus 0.00190433282
Shape:Rod 1.403e-19238347
Shape:Sphere 0.0006298319
Shape:Spiral 1.652e-6534
Temp._range:Hyperthermophilic 0.0000482323
Temp._range:Mesophilic 0.0039822264473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 132
Effective number of orgs (counting one per cluster within 468 clusters): 116

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SCO ncbi Streptomyces coelicolor A3(2)1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DRAD243230 ncbi Deinococcus radiodurans R11
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BLON206672 ncbi Bifidobacterium longum NCC27051
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  EG11192   EG10966   EG10965   EG10829   EG10004   
WSUC273121 WS0188
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276 TP_0687
TKOD69014
TDEN326298
TACI273075
STOK273063
SSP387093 SUN_2210
SSOL273057
SMAR399550
SCO SCO1479
SACI330779
RCAN293613 A1E_04920
RBEL391896 A1I_07245
RAKA293614 A1C_05985
PTOR263820
PMAR167542 P9515ORF_0869
PMAR167540 PMM0191
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747 PPA1166
PABY272844
OTSU357244 OTBS_0788
NSP387092
NSEN222891 NSE_0726
NPHA348780
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LBIF456481 LEPBI_I0349
LBIF355278 LBF_0338
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HBUT415426
HACI382638
FSP1855 FRANEAN1_1715
FSP106370 FRANCCI3_3193
ERUM302409
ERUM254945
ECHA205920 ECH_0322
ECAN269484 ECAJ_0681
DRAD243230 DR_1916
CTRA471473
CTRA471472
CSUL444179
CPRO264201 PC0660
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CHOM360107
CGLU196627 CG1861
CFET360106
CFEL264202
CCUR360105
CCON360104 CCC13826_0545
CCAV227941
CABO218497
BXEN266265
BSP107806 BU434
BLON206672 BL1439
BGAR290434 BG0843
BBUR224326 BB_0818
BAPH372461
BAPH198804 BUSG419
BAFZ390236 BAPKO_0871
AYEL322098
AURANTIMONAS
APHA212042 APH_0170
APER272557
ANAE240017
AMAR234826
ALAI441768 ACL_0304
AFUL224325
ABUT367737
AAUR290340 AAUR_2293


Organism features enriched in list (features available for 125 out of the 132 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00517461192
Arrangment:Pairs 0.00002279112
Arrangment:Singles 0.001786275286
Disease:Pharyngitis 3.729e-688
Disease:bronchitis_and_pneumonitis 3.729e-688
Endospores:No 6.253e-973211
Endospores:Yes 0.0000228153
GC_Content_Range4:0-40 2.029e-668213
GC_Content_Range4:60-100 4.447e-613145
GC_Content_Range7:0-30 4.302e-72547
GC_Content_Range7:50-60 0.003024413107
GC_Content_Range7:60-70 3.403e-611134
Genome_Size_Range5:0-2 3.034e-2985155
Genome_Size_Range5:2-4 0.007662332197
Genome_Size_Range5:4-6 5.373e-166184
Genome_Size_Range5:6-10 0.0006816247
Genome_Size_Range9:0-1 1.184e-112227
Genome_Size_Range9:1-2 3.802e-1663128
Genome_Size_Range9:3-4 0.0037977877
Genome_Size_Range9:4-5 4.262e-8396
Genome_Size_Range9:5-6 3.209e-7388
Gram_Stain:Gram_Neg 0.008708761333
Gram_Stain:Gram_Pos 4.386e-99150
Habitat:Host-associated 0.001292958206
Habitat:Multiple 1.873e-716178
Habitat:Specialized 0.00028732253
Optimal_temp.:100 0.009671033
Optimal_temp.:35-40 0.009671033
Optimal_temp.:37 0.003301033106
Optimal_temp.:85 0.002034244
Oxygen_Req:Aerobic 0.003299428185
Oxygen_Req:Anaerobic 0.000063437102
Oxygen_Req:Facultative 1.850e-622201
Oxygen_Req:Microaerophilic 0.00003011218
Pathogenic_in:Ruminant 0.009671033
Salinity:Extreme_halophilic 0.005602857
Shape:Irregular_coccus 4.112e-91517
Shape:Pleomorphic 0.001556368
Shape:Rod 1.093e-1634347
Shape:Sphere 4.596e-91619
Shape:Spiral 1.900e-82234
Temp._range:Hyperthermophilic 4.878e-81723
Temp._range:Mesophilic 0.000068886473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462110.5284
PWY-5918 (heme biosynthesis I)2722230.5090
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951750.4952
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181890.4935
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862270.4844
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491420.4738
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081790.4671
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002310.4610
PWY-5386 (methylglyoxal degradation I)3052330.4566
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392490.4449
PWY-4041 (γ-glutamyl cycle)2792170.4448
TYRFUMCAT-PWY (tyrosine degradation I)1841600.4389
PWY0-381 (glycerol degradation I)4172850.4338
PWY-5194 (siroheme biosynthesis)3122330.4325
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251840.4316
PWY-6317 (galactose degradation I (Leloir pathway))4643050.4314
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831580.4292
P163-PWY (lysine fermentation to acetate and butyrate)3672600.4250
GLUTAMINDEG-PWY (glutamine degradation I)1911620.4222
PWY-1269 (CMP-KDO biosynthesis I)3252370.4142
PWY0-862 (cis-dodecenoyl biosynthesis)3432460.4123
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002230.4095
ARO-PWY (chorismate biosynthesis I)5103200.4093
THISYN-PWY (thiamin biosynthesis I)5023170.4089
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))5053180.4079
PANTO-PWY (pantothenate biosynthesis I)4723050.4070
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582990.4058
PWY-5964 (molybdopterin guanine dinucleotide biosynthesis)2902170.4058
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982720.4054
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912170.4022
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911590.4013



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10966   EG10965   EG10829   EG10004   
EG111920.9994750.9999410.99940.9995
EG109660.9997190.9993780.998809
EG109650.9995550.999488
EG108290.998884
EG10004



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PAIRWISE BLAST SCORES:

  EG11192   EG10966   EG10965   EG10829   EG10004   
EG111920.0f0----
EG10966-0.0f0---
EG10965--0.0f0--
EG10829---0.0f0-
EG10004----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10829 EG10965 EG10966 (centered at EG10966)
EG11192 (centered at EG11192)
EG10004 (centered at EG10004)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11192   EG10966   EG10965   EG10829   EG10004   
327/623411/623416/623419/623419/623
AAEO224324:0:Tyes048-90528
AAUR290340:2:Tyes-0---
AAVE397945:0:Tyes2936293929370722
ABAC204669:0:Tyes36320363043883628
ABAU360910:0:Tyes5255445425080
ABOR393595:0:Tyes37810045
ACAU438753:0:Tyes2626279262702211
ACEL351607:0:Tyes-47-2890
ACRY349163:8:Tyes9150914-1195
ADEH290397:0:Tyes8888278870648
AEHR187272:0:Tyes5240407
AFER243159:0:Tyes6350201
AHYD196024:0:Tyes403202230111
ALAI441768:0:Tyes--0--
AMAR329726:9:Tyes-2371532950620
AMET293826:0:Tyes4350433414431
AORE350688:0:Tyes02892204
APHA212042:0:Tyes--0--
APLE416269:0:Tyes0181721018191957
APLE434271:0:Tno0182421218261979
ASAL382245:5:Tyes600239344046
ASP1667:3:Tyes-40--0
ASP232721:2:Tyes5425655630617
ASP62928:0:Tyes3540353135330682
ASP62977:0:Tyes--1881110
ASP76114:2:Tyes862155415528430
AVAR240292:3:Tyes-352305872342
BABO262698:0:Tno---0332
BABO262698:1:Tno0-1--
BAFZ390236:2:Fyes0----
BAMB339670:3:Tno24825124901999
BAMB398577:3:Tno22923223001821
BAMY326423:0:Tyes09212214
BANT260799:0:Tno18593-014
BANT261594:2:Tno18618-014
BANT568206:2:Tyes03966-184
BANT592021:2:Tno1862616014
BAPH198804:0:Tyes--0--
BBAC264462:0:Tyes03-711-
BBAC360095:0:Tyes--0236782
BBRO257310:0:Tyes7867977957630
BBUR224326:21:Fno0----
BCAN483179:0:Tno---0476
BCAN483179:1:Tno0-1--
BCEN331271:2:Tno28128428201688
BCEN331272:3:Tyes27427727501787
BCER226900:1:Tyes18540-014
BCER288681:0:Tno18535-014
BCER315749:1:Tyes1860416014
BCER405917:1:Tyes19573-015
BCER572264:1:Tno18552-014
BCIC186490:0:Tyes60-0263
BCLA66692:0:Tyes-0-740755
BFRA272559:1:Tyes643--8670
BFRA295405:0:Tno734--9900
BGAR290434:2:Fyes0----
BHAL272558:0:Tyes12760127412571272
BHEN283166:0:Tyes--4778950
BHER314723:0:Fyes6---0
BJAP224911:0:Fyes33444333334538660
BLIC279010:0:Tyes010702214
BLON206672:0:Tyes-0---
BMAL243160:1:Tno302272135
BMAL320388:1:Tno50250550302300
BMAL320389:1:Tyes302604149
BMEL224914:0:Tno---4590
BMEL224914:1:Tno1-0--
BMEL359391:0:Tno---0328
BMEL359391:1:Tno0-1--
BOVI236:0:Tyes---0397
BOVI236:1:Tyes--0--
BPAR257311:0:Tno-9699679360
BPER257313:0:Tyes110233153
BPET94624:0:Tyes210244575
BPSE272560:1:Tyes16721669167119780
BPSE320372:1:Tno20102007200923420
BPSE320373:1:Tno19041901190322670
BPUM315750:0:Tyes09212214
BQUI283165:0:Tyes--3856540
BSP107806:2:Tyes--0--
BSP36773:2:Tyes29629929702075
BSP376:0:Tyes30684168306934960
BSUB:0:Tyes012352214
BSUI204722:0:Tyes---0458
BSUI204722:1:Tyes0-1--
BSUI470137:0:Tno---0450
BSUI470137:1:Tno0-1--
BTHA271848:1:Tno8048078055040
BTHE226186:0:Tyes658--26110
BTHU281309:1:Tno18541-014
BTHU412694:1:Tno18488-014
BTRI382640:1:Tyes--69011860
BTUR314724:0:Fyes6---0
BVIE269482:7:Tyes22923223001890
BWEI315730:4:Tyes18565-014
CACE272562:1:Tyes05492204
CAULO:0:Tyes244-24502307
CBEI290402:0:Tyes03952194
CBLO203907:0:Tyes0-2--
CBLO291272:0:Tno2-4-0
CBOT36826:1:Tno2156719017
CBOT441770:0:Tyes2170919017
CBOT441771:0:Tno2159819017
CBOT441772:1:Tno2154919017
CBOT498213:1:Tno2165719017
CBOT508765:1:Tyes1770179196181
CBOT515621:2:Tyes2158519017
CBOT536232:0:Tno2164519017
CBUR227377:1:Tyes0315562
CBUR360115:1:Tno0315614
CBUR434922:2:Tno8007977997950
CCHL340177:0:Tyes1136--01298
CCON360104:2:Tyes--0--
CDES477974:0:Tyes7090707-705
CDIF272563:1:Tyes3118330028
CDIP257309:0:Tyes-42--0
CEFF196164:0:Fyes-43--0
CGLU196627:0:Tyes-0---
CHUT269798:0:Tyes0--34872827
CHYD246194:0:Tyes2273620018
CJAP155077:0:Tyes03303330132233255
CJEI306537:0:Tyes-31--0
CKLU431943:1:Tyes01757--4
CMIC31964:2:Tyes-0-191245
CMIC443906:2:Tyes-468-0438
CNOV386415:0:Tyes4070405-403
CPEL335992:0:Tyes--312-0
CPER195102:1:Tyes1921217015
CPER195103:0:Tno1920017015
CPER289380:3:Tyes41822-0
CPHY357809:0:Tyes23100-2319-
CPRO264201:0:Fyes0----
CPSY167879:0:Tyes047394737474275
CRUT413404:0:Tyes-044388262
CSAL290398:0:Tyes2312592572690
CSP501479:6:Fyes----0
CSP501479:8:Fyes1506015071074-
CSP78:2:Tyes0-13962578
CTEP194439:0:Tyes38--13460
CTET212717:0:Tyes09031162
CVES412965:0:Tyes-042350249
CVIO243365:0:Tyes30002918292002198
DARO159087:0:Tyes35173512351402807
DDES207559:0:Tyes27251549--0
DETH243164:0:Tyes-0-1219413
DGEO319795:1:Tyes---01171
DHAF138119:0:Tyes2800278223276
DNOD246195:0:Tyes20-0354170
DOLE96561:0:Tyes323471321-0
DPSY177439:2:Tyes1216-1214-0
DRAD243230:3:Tyes---0-
DRED349161:0:Tyes96609681350970
DSHI398580:5:Tyes18-1901482
DSP216389:0:Tyes-0-1098402
DSP255470:0:Tno-0-1024316
DVUL882:1:Tyes01177--2442
ECAN269484:0:Tyes--0--
ECAR218491:0:Tyes93240107
ECHA205920:0:Tyes--0--
ECOL199310:0:Tno51210140
ECOL316407:0:Tno824012
ECOL331111:6:Tno51210140
ECOL362663:0:Tno5119130
ECOL364106:1:Tno51210140
ECOL405955:2:Tyes5119130
ECOL409438:6:Tyes51311150
ECOL413997:0:Tno5119130
ECOL439855:4:Tno5119130
ECOL469008:0:Tno924014
ECOL481805:0:Tno824013
ECOL585034:0:Tno5119130
ECOL585035:0:Tno5119130
ECOL585055:0:Tno5119130
ECOL585056:2:Tno5119130
ECOL585057:0:Tno61412160
ECOL585397:0:Tno5108120
ECOL83334:0:Tno5119130
ECOLI:0:Tno5119130
ECOO157:0:Tno5119130
EFAE226185:3:Tyes1090010871074-
EFER585054:1:Tyes6108120
ELIT314225:0:Tyes--9030-
ESP42895:1:Tyes824013
FALN326424:0:Tyes---5660
FJOH376686:0:Tyes0--22242750
FMAG334413:1:Tyes01582-4
FNOD381764:0:Tyes667-6650459
FNUC190304:0:Tyes374195137301180
FPHI484022:1:Tyes-1041140601457
FRANT:0:Tno-0620736303
FSP106370:0:Tyes----0
FSP1855:0:Tyes----0
FSUC59374:0:Tyes0-425-780
FTUL351581:0:Tno-7677460246
FTUL393011:0:Tno-7016810238
FTUL393115:0:Tyes-0604718301
FTUL401614:0:Tyes-8563530786
FTUL418136:0:Tno-2482700731
FTUL458234:0:Tno-7166950249
GBET391165:0:Tyes--2048-0
GFOR411154:0:Tyes2783--16810
GKAU235909:1:Tyes014332214
GMET269799:1:Tyes5585555570896
GOXY290633:5:Tyes-173792802428
GSUL243231:0:Tyes1110110711092010
GTHE420246:1:Tyes014602204
GURA351605:0:Tyes12871284128601061
GVIO251221:0:Tyes-1491-0-
HARS204773:0:Tyes1713171617140501
HAUR316274:2:Tyes-4224-04577
HCHE349521:0:Tyes51405118512051140
HDUC233412:0:Tyes0141413361412380
HHAL349124:0:Tyes82901339
HINF281310:0:Tyes0130313051302492
HINF374930:0:Tyes04674654681139
HINF71421:0:Tno0125412561253483
HMOD498761:0:Tyes2810284307286
HNEP81032:0:Tyes164-16301256
HSOM205914:1:Tyes11571319132113180
HSOM228400:0:Tno3245455435460
ILOI283942:0:Tyes22352194219621880
JSP290400:1:Tyes1943019422007396
JSP375286:0:Tyes9979949960487
KPNE272620:2:Tyes111715190
KRAD266940:2:Fyes-2885-02943
LACI272621:0:Tyes-03653515
LBIF355278:2:Tyes---0-
LBIF456481:2:Tno---0-
LBOR355276:1:Tyes-3750760-
LBOR355277:1:Tno-38510680-
LBRE387344:2:Tyes-0-219231
LCAS321967:1:Tyes-0907688
LCHO395495:0:Tyes021198741961
LDEL321956:0:Tyes-0419--
LDEL390333:0:Tyes-0360--
LGAS324831:0:Tyes-970-492
LHEL405566:0:Tyes-0-3036
LINN272626:1:Tno4100409393407
LINT189518:1:Tyes-0-873-
LINT267671:1:Tno-0-2096-
LINT363253:3:Tyes1390---
LJOH257314:0:Tyes-439592-0
LLAC272622:5:Tyes-01947--
LLAC272623:0:Tyes-01793--
LMES203120:1:Tyes-81011500665
LMON169963:0:Tno3330332316330
LMON265669:0:Tyes3090308292306
LPLA220668:0:Tyes-3160142
LPNE272624:0:Tno20124478
LPNE297245:1:Fno30225425
LPNE297246:1:Fyes30225561
LPNE400673:0:Tno30226487
LREU557436:0:Tyes-0461447459
LSAK314315:0:Tyes-520142
LSPH444177:1:Tyes02295129-
LWEL386043:0:Tyes3110310294308
LXYL281090:0:Tyes-94-0123
MABS561007:1:Tyes-55-4580
MAER449447:0:Tyes-416904652-
MAQU351348:2:Tyes08482882982
MAVI243243:0:Tyes-81--0
MBOV233413:0:Tno-1199--0
MBOV410289:0:Tno-1160--0
MCAP243233:0:Tyes95909102726
MEXT419610:0:Tyes01196121511918
MFLA265072:0:Tyes0426268
MGIL350054:3:Tyes-74--0
MLEP272631:0:Tyes-0--32
MLOT266835:2:Tyes5580-558101794
MMAG342108:0:Tyes545205154622650
MMAR394221:0:Tyes0-1267-
MPET420662:1:Tyes13815114511660
MSME246196:0:Tyes-0--89
MSP164756:1:Tno-0--92
MSP164757:0:Tno-0--92
MSP189918:2:Tyes-0--92
MSP266779:3:Tyes60-5902357
MSP400668:0:Tyes38083832383038360
MSP409:2:Tyes30080300760325970
MSUC221988:0:Tyes01540154215391745
MTBCDC:0:Tno-1283--0
MTBRV:0:Tno-1202--0
MTHE264732:0:Tyes0775-333
MTUB336982:0:Tno-1167--0
MTUB419947:0:Tyes-1252--0
MVAN350058:0:Tyes-429-0510
MXAN246197:0:Tyes1451014501961155
NARO279238:0:Tyes-196841614090
NEUR228410:0:Tyes21370191915061113
NEUT335283:2:Tyes17319750931170
NFAR247156:2:Tyes-70-5880
NGON242231:0:Tyes1581083108501082
NHAM323097:2:Tyes2226-222519280
NMEN122586:0:Tno09109121032909
NMEN122587:0:Tyes2261177117901176
NMEN272831:0:Tno2129949960993
NMEN374833:0:Tno226111411160-
NMUL323848:3:Tyes15028282071
NOCE323261:1:Tyes02532512552002
NSEN222891:0:Tyes--0--
NSP103690:6:Tyes-1449047303035
NSP35761:1:Tyes-0--46
NWIN323098:0:Tyes1662-166114880
OANT439375:4:Tyes---0-
OANT439375:5:Tyes021001-755
OCAR504832:0:Tyes1876-187517250
OIHE221109:0:Tyes-5280182
OTSU357244:0:Fyes--0--
PACN267747:0:Tyes-0---
PAER208963:0:Tyes151816250
PAER208964:0:Tno151816250
PARC259536:0:Tyes--0368111
PATL342610:0:Tyes42723053033090
PCAR338963:0:Tyes0-1331741
PCRY335284:1:Tyes--0399115
PDIS435591:0:Tyes0--2528538
PENT384676:0:Tyes7148220
PFLU205922:0:Tyes8119190
PFLU216595:1:Tyes8119190
PFLU220664:0:Tyes8119190
PGIN242619:0:Tyes149--01307
PHAL326442:1:Tyes1401431411490
PING357804:0:Tyes3408140337932480
PINT246198:0:Tyes----0
PINT246198:1:Tyes32--0-
PLUM243265:0:Fyes4703131504698
PLUT319225:0:Tyes1390--01515
PMAR146891:0:Tyes-0314607-
PMAR167539:0:Tyes-0260630-
PMAR167540:0:Tyes-0---
PMAR167542:0:Tyes---0-
PMAR167546:0:Tyes--0325-
PMAR167555:0:Tyes-0265535-
PMAR59920:0:Tno-142216720-
PMAR74546:0:Tyes-0282582-
PMAR74547:0:Tyes-1557-0-
PMAR93060:0:Tyes-0348654-
PMEN399739:0:Tyes101311200
PMOB403833:0:Tyes0-297502
PMUL272843:1:Tyes956130234
PNAP365044:8:Tyes4954924940876
PPEN278197:0:Tyes-2900142
PPRO298386:2:Tyes1024014
PPUT160488:0:Tno101711250
PPUT351746:0:Tyes8169240
PPUT76869:0:Tno7148220
PRUM264731:0:Tyes588--0493
PSP117:0:Tyes3439--0-
PSP296591:2:Tyes86486186302700
PSP312153:0:Tyes302715670
PSP56811:2:Tyes--8518930
PSTU379731:0:Tyes3273243260337
PSYR205918:0:Tyes11810020
PSYR223283:2:Tyes11810020
PTHE370438:0:Tyes7580756718754
RAKA293614:0:Fyes--0--
RALB246199:0:Tyes0-216032106
RBEL336407:0:Tyes--0890-
RBEL391896:0:Fno--0--
RCAN293613:0:Fyes--0--
RCAS383372:0:Tyes-590-02767
RCON272944:0:Tno--3010-
RDEN375451:4:Tyes1352154135313210
RETL347834:5:Tyes1096-109717400
REUT264198:3:Tyes302338279
REUT381666:2:Tyes03120892026
RFEL315456:2:Tyes--8690-
RFER338969:1:Tyes01523152120621021
RLEG216596:6:Tyes1211-121220370
RMAS416276:1:Tyes--1910-
RMET266264:2:Tyes03120742019
RPAL258594:0:Tyes3005-300425960
RPAL316055:0:Tyes2809-280822990
RPAL316056:0:Tyes19212255192222280
RPAL316057:0:Tyes2795-279424360
RPAL316058:0:Tyes1865-186622470
RPOM246200:1:Tyes15082737150912490
RPRO272947:0:Tyes--1620-
RRIC392021:0:Fno--2740-
RRIC452659:0:Tyes--2710-
RRUB269796:1:Tyes01423112953357
RSAL288705:0:Tyes-38--0
RSOL267608:1:Tyes302562312
RSP101510:3:Fyes-0--255
RSP357808:0:Tyes-2542-19460
RSPH272943:4:Tyes1278012779741983
RSPH349101:2:Tno1269012689831961
RSPH349102:5:Tyes61420746156710
RTYP257363:0:Tno--1690-
RXYL266117:0:Tyes-013433-
SACI56780:0:Tyes01360--1307
SAGA205921:0:Tno-14640--
SAGA208435:0:Tno-15950--
SAGA211110:0:Tyes-16160--
SALA317655:1:Tyes--151601543
SARE391037:0:Tyes-620-0670
SAUR158878:1:Tno-4250182
SAUR158879:1:Tno-4220182
SAUR196620:0:Tno-4920182
SAUR273036:0:Tno-4180172
SAUR282458:0:Tno-5120182
SAUR282459:0:Tno-4250182
SAUR359786:1:Tno-4150182
SAUR359787:1:Tno-4240182
SAUR367830:3:Tno-4860182
SAUR418127:0:Tyes-4220182
SAUR426430:0:Tno-4160171
SAUR93061:0:Fno-5340182
SAUR93062:1:Tno-4560182
SAVE227882:1:Fyes-031-33
SBAL399599:3:Tyes2979036
SBAL402882:1:Tno2379030
SBOY300268:1:Tyes58082780
SCO:2:Fyes--0--
SDEG203122:0:Tyes72018400
SDEN318161:0:Tyes03187318532317
SDYS300267:1:Tyes61210140
SELO269084:0:Tyes-0181294-
SENT209261:0:Tno824013
SENT220341:0:Tno824013
SENT295319:0:Tno51210140
SENT321314:2:Tno51311150
SENT454169:2:Tno51210140
SEPI176279:1:Tyes-4130-2
SEPI176280:0:Tno-4300-2
SERY405948:0:Tyes-0-396270
SFLE198214:0:Tyes51210140
SFLE373384:0:Tno924014
SFUM335543:0:Tyes313516273133-0
SGLO343509:3:Tyes51412150
SGOR29390:0:Tyes-13701750-
SHAE279808:0:Tyes-0418400416
SHAL458817:0:Tyes3657043
SHIGELLA:0:Tno824013
SLAC55218:1:Fyes22361279223523220
SLOI323850:0:Tyes71715250
SMED366394:3:Tyes0-16332767
SMEL266834:2:Tyes798-79913200
SMUT210007:0:Tyes-14540--
SONE211586:1:Tyes38410239453833
SPEA398579:0:Tno74139460
SPNE1313:0:Tyes-095--
SPNE170187:0:Tyes-092--
SPNE171101:0:Tno-095--
SPNE487213:0:Tno-088--
SPNE487214:0:Tno-092--
SPNE488221:0:Tno-090--
SPRO399741:1:Tyes52523270
SPYO160490:0:Tno-2720--
SPYO186103:0:Tno-3300--
SPYO193567:0:Tno-12350--
SPYO198466:0:Tno-3260--
SPYO286636:0:Tno-3150--
SPYO293653:0:Tno-3500--
SPYO319701:0:Tyes-2970--
SPYO370551:0:Tno-3580--
SPYO370552:0:Tno-3030--
SPYO370553:0:Tno-3520--
SPYO370554:0:Tyes-3350--
SRUB309807:1:Tyes3--2340
SSAP342451:2:Tyes-0437-435
SSED425104:0:Tyes4857055
SSON300269:1:Tyes924014
SSP1131:0:Tyes-18060584-
SSP1148:0:Tyes-1445021981309
SSP292414:2:Tyes82121418209530
SSP321327:0:Tyes-1697241717630
SSP321332:0:Tyes-145902692912
SSP387093:0:Tyes--0--
SSP644076:7:Fyes1011--9260
SSP64471:0:Tyes-14038680-
SSP84588:0:Tyes-12617550-
SSP94122:1:Tyes35133547354503506
SSUI391295:0:Tyes-16920--
SSUI391296:0:Tyes-17090--
STHE264199:0:Tyes-01174--
STHE292459:0:Tyes011172484
STHE299768:0:Tno-01209--
STHE322159:2:Tyes-01040--
STRO369723:0:Tyes-535-0582
STYP99287:1:Tyes51210140
SWOL335541:0:Tyes4210419-417
TCRU317025:0:Tyes1432322262410
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