CANDIDATE ID: 766

CANDIDATE ID: 766

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9939000e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11192 (yicC) (b3644)
   Products of gene:
     - EG11192-MONOMER (conserved protein)

- EG10965 (gmk) (b3648)
   Products of gene:
     - GUANYL-KIN-MONOMER (Gmk)
     - GUANYL-KIN-CPLX (deoxyguanylate kinase / guanylate kinase)
       Reactions:
        ATP + dGMP  =  ADP + 2'-deoxyguanosine-5'-diphosphate + H+
        GMP + ATP  =  GDP + ADP + H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6125 (guanosine nucleotides de novo biosynthesis)
         P1-PWY (P1-PWY)

- EG10863 (rph) (b3643)
   Products of gene:
     - EG10863-MONOMER (RNase PH monomer)
     - CPLX0-1081 (RNase PH)
       Reactions:
        a tRNA precursor with a short 3' extension + n phosphate  ->  an uncharged tRNA + n a ribonucleoside diphosphate
         In pathways
         PWY0-1479 (tRNA processing pathway)
        a tRNA precursor with a 5' extension and a short 3' extension + n phosphate  ->  a tRNA precursor with a 5' extension + n a nucleoside diphosphate
         In pathways
         PWY0-1479 (tRNA processing pathway)
        phosphate  =  a nucleoside diphosphate

- EG10808 (pyrE) (b3642)
   Products of gene:
     - OROPRIBTRANS-MONOMER (PyrE)
     - OROPRIBTRANS-CPLX (orotate phosphoribosyltransferase)
       Reactions:
        orotidine-5'-phosphate + diphosphate  =  5-phospho-alpha-D-ribose 1-diphosphate + orotate
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)
         PWY-5686 (uridine-5'-phosphate biosynthesis)

- EG10004 (dfp) (b3639)
   Products of gene:
     - EG10004-MONOMER (Dfp)
     - CPLX0-341 (fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase)
       Reactions:
        D-4'-phosphopantothenate + L-cysteine + CTP  ->  diphosphate + CMP + R-4'-phosphopantothenoyl-L-cysteine + H+
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)
        R-4'-phosphopantothenoyl-L-cysteine + H+  ->  4'-phosphopantetheine + CO2
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 297
Effective number of orgs (counting one per cluster within 468 clusters): 211

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TERY203124 ncbi Trichodesmium erythraeum IMS1014
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen5
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B4
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
RALB246199 Ruminococcus albus 84
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2555
NSP103690 ncbi Nostoc sp. PCC 71204
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
MXAN246197 ncbi Myxococcus xanthus DK 16225
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LINN272626 ncbi Listeria innocua Clip112625
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HNEP81032 Hyphomonas neptunium4
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S855
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255864
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-14
DPSY177439 ncbi Desulfotalea psychrophila LSv545
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CDIF272563 ncbi Clostridium difficile 6304
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CAULO ncbi Caulobacter crescentus CB154
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.4
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHAL272558 ncbi Bacillus halodurans C-1254
BCIC186490 Candidatus Baumannia cicadellinicola4
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB505
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs4
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAEO224324 ncbi Aquifex aeolicus VF54


Names of the homologs of the genes in the group in each of these orgs
  EG11192   EG10965   EG10863   EG10808   EG10004   
YPSE349747 YPSIP31758_0055YPSIP31758_0041YPSIP31758_0056YPSIP31758_0057YPSIP31758_0060
YPSE273123 YPTB0040YPTB0037YPTB0041YPTB0042YPTB0045
YPES386656 YPDSF_3862YPDSF_3865YPDSF_3861YPDSF_3860YPDSF_3857
YPES377628 YPN_3807YPN_3810YPN_3806YPN_3805YPN_3802
YPES360102 YPA_3499YPA_3502YPA_3498YPA_3497YPA_3494
YPES349746 YPANGOLA_A0048YPANGOLA_A0045YPANGOLA_A0049YPANGOLA_A0051YPANGOLA_A0054
YPES214092 YPO0043YPO0040YPO0044YPO0045YPO0048
YPES187410 Y0098Y0101Y0097Y0096Y0093
YENT393305 YE0057YE0047YE0058YE0059YE0062
XORY360094 XOOORF_4204XOOORF_4203XOOORF_4205XOOORF_4869XOOORF_4882
XORY342109 XOO1041XOO1042XOO1040XOO0474XOO0463
XORY291331 XOO1144XOO1145XOO1143XOO0508XOO0496
XFAS405440 XFASM12_0844XFASM12_0843XFASM12_0845XFASM12_0130XFASM12_0126
XFAS183190 PD_0721PD_0720PD_0722PD_0122PD_0118
XFAS160492 XF1504XF1503XF1505XF0153XF0149
XCAM487884 XCC-B100_0934XCC-B100_0935XCC-B100_0933XCC-B100_4031XCC-B100_4043
XCAM316273 XCAORF_3591XCAORF_3590XCAORF_3592XCAORF_0442XCAORF_0430
XCAM314565 XC_0959XC_0958XC_0960XC_3931XC_3943
XCAM190485 XCC3250XCC3249XCC3251XCC3847XCC3859
XAXO190486 XAC3396XAC3395XAC3397XAC3903XAC3914
XAUT78245 XAUT_3135XAUT_3136XAUT_2535XAUT_0078
VVUL216895 VV1_0833VV1_0850VV1_0832VV1_0831VV1_0828
VVUL196600 VV0278VV0243VV0279VV0280VV0283
VPAR223926 VP0176VP0161VP0177VP0178VP0181
VFIS312309 VF0110VF0106VF0111VF0112VF0125
VEIS391735 VEIS_4159VEIS_4218VEIS_1618VEIS_2654
VCHO345073 VC0395_A2588VC0395_A2280VC0395_A2589VC0395_A2590VC0395_A2595
VCHO VC0209VC2708VC0210VC0211VC0215
TTUR377629 TERTU_0175TERTU_0174TERTU_0176TERTU_0190TERTU_0185
TTEN273068 TTE1513TTE1511TTE0618TTE1509
TSP1755 TETH514_1763TETH514_1761TETH514_0551TETH514_1759
TPSE340099 TETH39_1326TETH39_1324TETH39_1683TETH39_1322
TERY203124 TERY_2834TERY_2089TERY_0376TERY_2643
TDEN292415 TBD_0474TBD_0473TBD_0477TBD_0255TBD_2587
TCRU317025 TCR_2055TCR_2138TCR_1895TCR_1915
SWOL335541 SWOL_1239SWOL_1237SWOL_0453SWOL_1277SWOL_1235
STYP99287 STM3735STM3740STM3734STM3733STM3730
STHE292459 STH1337STH1339STH343STH1341
SSP94122 SHEWANA3_3778SHEWANA3_3810SHEWANA3_3777SHEWANA3_3776SHEWANA3_3771
SSP644076 SCH4B_2332SCH4B_3196SCH4B_1996SCH4B_1303
SSP321332 CYB_0056CYB_1741CYB_1487CYB_0983
SSP321327 CYA_2697CYA_2643CYA_2438CYA_0161
SSP292414 TM1040_1267TM1040_1266TM1040_2872TM1040_1777TM1040_0458
SSON300269 SSO_3762SSO_3757SSO_3763SSO_3764SSO_3767
SSED425104 SSED_0377SSED_0336SSED_0378SSED_0379SSED_0384
SPRO399741 SPRO_4848SPRO_4867SPRO_4847SPRO_4846SPRO_4843
SPEA398579 SPEA_3845SPEA_3877SPEA_3844SPEA_3843SPEA_3838
SONE211586 SO_4257SO_0361SO_4256SO_4255SO_4249
SMEL266834 SMC00576SMC00577SMC01144SMC02165SMC01161
SMED366394 SMED_0758SMED_0759SMED_0010SMED_0107SMED_3566
SLOI323850 SHEW_3489SHEW_3497SHEW_3488SHEW_3487SHEW_3482
SLAC55218 SL1157_2860SL1157_2859SL1157_1093SL1157_2677SL1157_0579
SHIGELLA YICCGMKRPHPYREDFP
SHAL458817 SHAL_0421SHAL_0392SHAL_0422SHAL_0423SHAL_0428
SGLO343509 SG2214SG2221SG2213SG2212SG2209
SFUM335543 SFUM_3632SFUM_3630SFUM_2766SFUM_0467
SFLE373384 SFV_3886SFV_3881SFV_3887SFV_3888SFV_3891
SFLE198214 AAN45130.1AAN45135.1AAN45129.1AAN45128.1AAN45125.1
SENT454169 SEHA_C4061SEHA_C4066SEHA_C4060SEHA_C4059SEHA_C4056
SENT321314 SCH_3658SCH_3664SCH_3657SCH_3656SCH_3653
SENT295319 SPA3587SPA3592SPA3586SPA3585SPA3582
SENT220341 STY4059STY4052STY4060STY4061STY4064
SENT209261 T3783T3778T3784T3785T3788
SDYS300267 SDY_4075SDY_4080SDY_4074SDY_4073SDY_4069
SDEN318161 SDEN_0318SDEN_3433SDEN_0319SDEN_0320SDEN_0325
SDEG203122 SDE_3684SDE_3695SDE_3683SDE_3672SDE_3677
SBOY300268 SBO_3646SBO_3729SBO_3645SBO_3644SBO_3641
SBAL402882 SHEW185_0367SHEW185_0353SHEW185_0369SHEW185_0370SHEW185_0375
SBAL399599 SBAL195_0380SBAL195_0360SBAL195_0381SBAL195_0382SBAL195_0387
SAVE227882 SAV6871SAV5170SAV4522SAV6873
SACI56780 SYN_01278SYN_00902SYN_02702SYN_02177
RSPH349102 RSPH17025_1103RSPH17025_1104RSPH17025_2658RSPH17025_0324RSPH17025_0484
RSPH349101 RSPH17029_1564RSPH17029_1563RSPH17029_2882RSPH17029_0580RSPH17029_2252
RSPH272943 RSP_2920RSP_2919RSP_1221RSP_1929RSP_0599
RSOL267608 RSC2156RSC2155RSC2159RSC0139RSC2461
RRUB269796 RRU_A0428RRU_A0429RRU_A3641RRU_A3796
RPOM246200 SPO_1944SPO_1945SPO_0008SPO_0408
RPAL316058 RPB_2471RPB_2472RPB_0425RPB_0847RPB_0622
RPAL316057 RPD_2975RPD_2974RPD_0395RPD_0955RPD_0209
RPAL316056 RPC_2304RPC_2305RPC_0325RPC_4858RPC_0380
RPAL316055 RPE_3302RPE_3301RPE_0353RPE_4822RPE_0467
RPAL258594 RPA3070RPA3069RPA0329RPA4724RPA0081
RMET266264 RMET_0855RMET_0856RMET_0852RMET_0150RMET_2887
RLEG216596 RL1562RL1563RL0380RL0501RL0357
RFER338969 RFER_1626RFER_3147RFER_1629RFER_3928RFER_2647
REUT381666 H16_A0952H16_A0953H16_A0949H16_A0224H16_A3048
REUT264198 REUT_A2474REUT_A2473REUT_A2477REUT_A0195REUT_A2747
RETL347834 RHE_CH01447RHE_CH01448RHE_CH00363RHE_CH00474RHE_CH00342
RDEN375451 RD1_2637RD1_2638RD1_0426RD1_3236RD1_1200
RALB246199 GRAORF_1837GRAORF_1839GRAORF_1112GRAORF_3948
PTHE370438 PTH_1797PTH_1795PTH_0791PTH_1804PTH_1793
PSYR223283 PSPTO_0076PSPTO_0075PSPTO_0077PSPTO_0080PSPTO_0085
PSYR205918 PSYR_0212PSYR_0211PSYR_0213PSYR_0216PSYR_0221
PSTU379731 PST_0462PST_0461PST_0463PST_0466PST_0472
PSP56811 PSYCPRWF_0577PSYCPRWF_2191PSYCPRWF_0521PSYCPRWF_0492
PSP312153 PNUC_1079PNUC_1078PNUC_1080PNUC_2007PNUC_1742
PSP296591 BPRO_1336BPRO_1335BPRO_1339BPRO_0217BPRO_3180
PPUT76869 PPUTGB1_5343PPUTGB1_5344PPUTGB1_5342PPUTGB1_5340PPUTGB1_5336
PPUT351746 PPUT_5203PPUT_5204PPUT_5202PPUT_5199PPUT_5195
PPUT160488 PP_5295PP_5296PP_5294PP_5291PP_5285
PPRO298386 PBPRA0197PBPRA0191PBPRA0198PBPRA0199PBPRA0201
PNAP365044 PNAP_0812PNAP_0811PNAP_0168PNAP_1186
PMUL272843 PM1875PM0922PM1876PM1877PM1153
PMEN399739 PMEN_4387PMEN_4388PMEN_4386PMEN_4383PMEN_4377
PLUM243265 PLU4871PLU0274PLU4870PLU4869PLU4866
PING357804 PING_3652PING_3623PING_3479PING_3478PING_0057
PHAL326442 PSHAA2789PSHAA2790PSHAA2788PSHAA2787PSHAA2644
PFLU220664 PFL_6060PFL_6061PFL_6059PFL_6056PFL_6052
PFLU216595 PFLU5992PFLU5993PFLU5991PFLU5988PFLU5983
PFLU205922 PFL_5548PFL_5549PFL_5547PFL_5544PFL_5540
PENT384676 PSEEN5440PSEEN5441PSEEN5439PSEEN5436PSEEN5432
PCRY335284 PCRYO_2003PCRYO_2154PCRYO_2034PCRYO_2118
PCAR338963 PCAR_1284PCAR_1285PCAR_2030PCAR_1325PCAR_2011
PATL342610 PATL_4283PATL_0347PATL_4282PATL_4281PATL_0045
PARC259536 PSYC_1723PSYC_1865PSYC_1753PSYC_1833
PAER208964 PA5335PA5336PA5334PA5331PA5320
PAER208963 PA14_70430PA14_70440PA14_70420PA14_70370PA14_70240
OIHE221109 OB1502OB2106OB1495OB1504
OCAR504832 OCAR_6364OCAR_6363OCAR_4413OCAR_7569OCAR_4489
OANT439375 OANT_0575OANT_0576OANT_0182OANT_1319
NWIN323098 NWI_1684NWI_1683NWI_0193NWI_0153NWI_0043
NSP103690 ALR0106ALR0069ALR5099ALL3111
NOCE323261 NOC_0956NOC_1212NOC_2442NOC_2998NOC_2992
NMUL323848 NMUL_A0065NMUL_A0052NMUL_A0066NMUL_A0225NMUL_A2137
NMEN374833 NMCC_0670NMCC_1571NMCC_1406NMCC_0347
NMEN272831 NMC0661NMC1579NMC1430NMC0345NMC1576
NMEN122587 NMA0916NMA1919NMA1702NMA0582NMA1916
NMEN122586 NMB_0711NMB_1661NMB_1499NMB_1874NMB_1658
NHAM323097 NHAM_2349NHAM_2348NHAM_0151NHAM_0451NHAM_0051
NGON242231 NGO0286NGO1310NGO0958NGO0029NGO1307
NEUT335283 NEUT_2372NEUT_0614NEUT_0308NEUT_2050NEUT_0783
NEUR228410 NE2472NE2254NE0276NE1734NE1463
MXAN246197 MXAN_4706MXAN_4705MXAN_2004MXAN_4633MXAN_4395
MSUC221988 MS0253MS1738MS0252MS0251MS1938
MSP409 M446_3194M446_3193M446_4253M446_6249
MSP400668 MMWYL1_4362MMWYL1_4384MMWYL1_4361MMWYL1_0619MMWYL1_0623
MSP266779 MESO_1764MESO_1763MESO_4016MESO_4055
MPET420662 MPE_A2708MPE_A2715MPE_A2705MPE_A0088MPE_A2571
MMAG342108 AMB0747AMB0748AMB4498AMB0202
MLOT266835 MLR7856MLR7857MLR4622MLR3167
MFLA265072 MFLA_0046MFLA_0048MFLA_0043MFLA_2485MFLA_0314
MEXT419610 MEXT_1999MEXT_2000MEXT_0401MEXT_3927
MCAP243233 MCA_3026MCA_2975MCA_3024MCA_2740MCA_2784
MAQU351348 MAQU_0549MAQU_0634MAQU_0548MAQU_0546MAQU_3563
LWEL386043 LWE1847LWE1846LWE1193LWE1850LWE1844
LPNE400673 LPC_1495LPC_1494LPC_1496LPC_0672LPC_1990
LPNE297246 LPP1993LPP1992LPP1994LPP1206LPP2552
LPNE297245 LPL1988LPL1987LPL1989LPL1212LPL2408
LPNE272624 LPG2011LPG2010LPG2012LPG1204LPG2488
LMON265669 LMOF2365_1856LMOF2365_1855LMOF2365_1247LMOF2365_1859LMOF2365_1853
LMON169963 LMO1828LMO1827LMO1238LMO1831LMO1825
LINN272626 LIN1942LIN1941LIN1201LIN1945LIN1939
LCHO395495 LCHO_0708LCHO_0729LCHO_0705LCHO_4049LCHO_2645
KPNE272620 GKPORF_B3353GKPORF_B3357GKPORF_B3347GKPORF_B3346GKPORF_B3342
JSP375286 MMA_1329MMA_1328MMA_1332MMA_0191MMA_0826
JSP290400 JANN_2441JANN_2440JANN_0206JANN_0907
ILOI283942 IL2421IL2382IL2425IL2426IL0239
HSOM228400 HSM_0325HSM_0546HSM_0326HSM_0008
HSOM205914 HS_1293HS_1457HS_1292HS_0143
HNEP81032 HNE_2154HNE_2153HNE_3315HNE_3268
HMOD498761 HM1_2124HM1_2127HM1_0465HM1_2129
HINF71421 HI_0467HI_1743HI_0273HI_0272HI_0953
HINF374930 CGSHIEE_00655CGSHIEE_03320CGSHIEE_01685CGSHIEE_01690CGSHIEE_07195
HINF281310 NTHI0598NTHI2054NTHI0381NTHI0380NTHI1126
HHAL349124 HHAL_0975HHAL_0976HHAL_0973HHAL_2292HHAL_2299
HDUC233412 HD_0302HD_1830HD_0301HD_1759HD_0733
HCHE349521 HCH_06336HCH_06315HCH_06338HCH_06340HCH_01021
HARS204773 HEAR2129HEAR2130HEAR2126HEAR0162HEAR0843
GURA351605 GURA_3163GURA_3162GURA_2256GURA_2069GURA_2927
GTHE420246 GTNG_1018GTNG_1020GTNG_2594GTNG_1013GTNG_1022
GSUL243231 GSU_2239GSU_2238GSU_1795GSU_1637GSU_1124
GMET269799 GMET_2328GMET_2327GMET_1876GMET_1938GMET_2673
GKAU235909 GK1165GK1167GK2666GK1157GK1169
FTUL458234 FTA_1478FTA_0378FTA_0535FTA_0854
FTUL418136 FTW_0628FTW_1326FTW_1636FTW_1186
FTUL401614 FTN_0691FTN_0387FTN_0529FTN_1128
FTUL393115 FTF1470CFTF0858FTF0437CFTF1147C
FTUL393011 FTH_1353FTH_0352FTH_0504FTH_0802
FTUL351581 FTL_1391FTL_0357FTL_0507FTL_0808
FSUC59374 FSU0386FSU0818FSU1058FSU0884FSU1185
FRANT GMKRPHPYREDFP
FPHI484022 FPHI_1850FPHI_0451FPHI_0307FPHI_1904
FNUC190304 FN2034FN2033FN1851FN0711
ESP42895 ENT638_0095ENT638_0091ENT638_0096ENT638_0097ENT638_0100
EFER585054 EFER_3936EFER_3940EFER_3935EFER_3934EFER_3930
EFAE226185 EF_3131EF_3127EF_1122EF_1712
ECOO157 YICCGMKRPHPYREDFP
ECOL83334 ECS4519ECS4523ECS4518ECS4517ECS4514
ECOL585397 ECED1_4328ECED1_4332ECED1_4327ECED1_4326ECED1_4323
ECOL585057 ECIAI39_4163ECIAI39_4170ECIAI39_4162ECIAI39_4161ECIAI39_4157
ECOL585056 ECUMN_4159ECUMN_4164ECUMN_4158ECUMN_4157ECUMN_4154
ECOL585055 EC55989_4109EC55989_4114EC55989_4108EC55989_4107EC55989_4104
ECOL585035 ECS88_4058ECS88_4063ECS88_4057ECS88_4056ECS88_4053
ECOL585034 ECIAI1_3815ECIAI1_3820ECIAI1_3814ECIAI1_3813ECIAI1_3810
ECOL481805 ECOLC_0067ECOLC_0063ECOLC_0068ECOLC_0069ECOLC_0072
ECOL469008 ECBD_0082ECBD_0077ECBD_0083ECBD_0084ECBD_0087
ECOL439855 ECSMS35_3979ECSMS35_3983ECSMS35_3978ECSMS35_3977ECSMS35_3974
ECOL413997 ECB_03501ECB_03505ECB_03500ECB_03499ECB_03496
ECOL409438 ECSE_3924ECSE_3930ECSE_3923ECSE_3922ECSE_3919
ECOL405955 APECO1_2817APECO1_2813APECO1_2818APECO1_2819APECO1_2822
ECOL364106 UTI89_C4188UTI89_C4193UTI89_C4187UTI89_C4186UTI89_C4183
ECOL362663 ECP_3742ECP_3746ECP_3741ECP_3740ECP_3737
ECOL331111 ECE24377A_4145ECE24377A_4151ECE24377A_4144ECE24377A_4143ECE24377A_4140
ECOL316407 ECK3634:JW3619:B3644ECK3638:JW3623:B3648ECK3632:JW3617:B3642ECK3629:JW5642:B3639
ECOL199310 C4468C4473C4467C4466C4463
ECAR218491 ECA0130ECA0040ECA0140ECA0141ECA0144
DSHI398580 DSHI_1528DSHI_1529DSHI_3463DSHI_2976
DRED349161 DRED_1698DRED_1700DRED_2684DRED_1702
DPSY177439 DP2862DP2860DP1273DP2916DP1673
DOLE96561 DOLE_1912DOLE_1910DOLE_3177DOLE_1592
DNOD246195 DNO_0665DNO_0645DNO_0664DNO_0919DNO_0823
DHAF138119 DSY2731DSY2729DSY3222DSY2855DSY2727
DARO159087 DARO_3848DARO_3845DARO_3851DARO_0122DARO_3141
CVIO243365 CV_3850CV_3770CV_3847CV_4248CV_3080
CSP78 CAUL_2522CAUL_2523CAUL_0167CAUL_5070
CSP501479 CSE45_1805CSE45_1806CSE45_3415CSE45_1764CSE45_4341
CSAL290398 CSAL_3207CSAL_3233CSAL_3206CSAL_3204CSAL_2981
CPSY167879 CPS_0107CPS_4971CPS_0112CPS_0113CPS_0182
CPER289380 CPR_1721CPR_1719CPR_2240CPR_1717
CPER195103 CPF_2003CPF_2001CPF_2536CPF_1999
CPER195102 CPE1750CPE1748CPE2254CPE1746
CJAP155077 CJA_0202CJA_3569CJA_0203CJA_3528CJA_3523
CHYD246194 CHY_1490CHY_1488CHY_0314CHY_1495CHY_1486
CDIF272563 CD2589CD2588CD3308CD2587
CDES477974 DAUD_1599DAUD_1597DAUD_1505DAUD_0006DAUD_1595
CBUR434922 COXBU7E912_1781COXBU7E912_1780COXBU7E912_1782COXBU7E912_0950
CBUR360115 COXBURSA331_A0406COXBURSA331_A0407COXBURSA331_A0405COXBURSA331_A1061
CBUR227377 CBU_0300CBU_0301CBU_0299CBU_0886
CBOT508765 CLL_A1209CLL_A1211CLL_A0417CLL_A2575CLL_A1213
CBEI290402 CBEI_1139CBEI_1141CBEI_1006CBEI_1143
CAULO CC1680CC1681CC0152CC3712
CACE272562 CAC1716CAC1718CAC0027CAC1720
BWEI315730 BCERKBAB4_3696BCERKBAB4_4325BCERKBAB4_3709BCERKBAB4_3692
BVIE269482 BCEP1808_0915BCEP1808_0916BCEP1808_0914BCEP1808_2592
BTHU412694 BALH_3504BALH_4073BALH_3512BALH_3500
BTHU281309 BT9727_3614BT9727_4218BT9727_0532BT9727_3610
BTHA271848 BTH_I1585BTH_I1586BTH_I1584BTH_I0768
BSUI470137 BSUIS_A0489BSUIS_A0490BSUIS_A0174BSUIS_B1059
BSUI204722 BR_0463BR_0464BR_0173BR_A1064
BSUB BSU15660BSU15680BSU28370BSU15560BSU15700
BSP376 BRADO3316BRADO3317BRADO0173BRADO0748BRADO0077
BSP36773 BCEP18194_A4106BCEP18194_A4107BCEP18194_A4105BCEP18194_A5846
BPUM315750 BPUM_1465BPUM_1467BPUM_2491BPUM_1455BPUM_1469
BPSE320373 BURPS668_2950BURPS668_2949BURPS668_2951BURPS668_0965
BPSE320372 BURPS1710B_A3307BURPS1710B_A3306BURPS1710B_A3308BURPS1710B_A1179
BPSE272560 BPSL2564BPSL2563BPSL2565BPSL0904
BPET94624 BPET2267BPET2248BPET2268BPET0423BPET2816
BPER257313 BP1587BP1578BP1588BP0370BP1751
BPAR257311 BPP2996BPP3005BPP2995BPP4060BPP1982
BMEL359391 BAB1_0488BAB1_0489BAB1_0172BAB2_1024
BMEL224914 BMEI1470BMEI1469BMEI1775BMEII0235
BMAL320389 BMA10247_1965BMA10247_1964BMA10247_1966BMA10247_2114
BMAL320388 BMASAVP1_A0814BMASAVP1_A0815BMASAVP1_A0813BMASAVP1_A2660
BMAL243160 BMA_2097BMA_2096BMA_2098BMA_2244
BLIC279010 BL02291BL02293BL00312BL02280BL02295
BJAP224911 BLR4087BLR4088BLL0674BLR8134BLL0759
BHAL272558 BH2514BH2512BH3068BH2510
BCIC186490 BCI_0180BCI_0110BCI_0181BCI_0183
BCER572264 BCA_3973BCA_4596BCA_0656BCA_3969
BCER405917 BCE_3916BCE_4586BCE_0690BCE_3912
BCER315749 BCER98_2525BCER98_2523BCER98_3202BCER98_2531BCER98_2521
BCER288681 BCE33L3632BCE33L4234BCE33L0532BCE33L3628
BCER226900 BC_3871BC_4494BC_3882BC_3867
BCEN331272 BCEN2424_0998BCEN2424_0999BCEN2424_0997BCEN2424_2514
BCEN331271 BCEN_0519BCEN_0520BCEN_0518BCEN_1903
BCAN483179 BCAN_A0468BCAN_A0469BCAN_A0178BCAN_B1086
BBRO257310 BB2962BB2971BB2961BB4533BB2170
BANT592021 BAA_4035BAA_4033BAA_4732BAA_4044BAA_4031
BANT568206 BAMEG_0620BAMEG_4751BAMEG_0610BAMEG_0624
BANT261594 GBAA4011GBAA4715GBAA4021GBAA4007
BANT260799 BAS3724BAS4377BAS3733BAS3720
BAMY326423 RBAM_015490RBAM_015510RBAM_025440RBAM_015530
BAMB398577 BAMMC406_0870BAMMC406_0871BAMMC406_0869BAMMC406_2432
BAMB339670 BAMB_0858BAMB_0859BAMB_0857BAMB_2561
BABO262698 BRUAB1_0485BRUAB1_0486BRUAB1_0169BRUAB2_1004
AVAR240292 AVA_1475AVA_2671AVA_2358AVA_3811
ASP76114 C1A25EBA3494C1A232EBA3324EBA838
ASP62977 ACIAD3324ACIAD0050ACIAD3525ACIAD3125
ASP62928 AZO3960AZO3953AZO3963AZO3663AZO1138
ASP232721 AJS_0926AJS_0947AJS_0923AJS_0234AJS_1001
ASAL382245 ASA_0100ASA_0036ASA_0101ASA_0102ASA_4230
APLE434271 APJL_0056APJL_0264APJL_0055APJL_0333APJL_2016
APLE416269 APL_0056APL_0256APL_0055APL_0318APL_1969
AORE350688 CLOS_1421CLOS_1423CLOS_0557CLOS_1425
AMET293826 AMET_2792AMET_2790AMET_0956AMET_4207AMET_2788
AMAR329726 AM1_5497AM1_2854AM1_0409AM1_0110
AHYD196024 AHA_4225AHA_0041AHA_4224AHA_4223AHA_0159
AFER243159 AFE_2476AFE_2475AFE_0758AFE_2675
AEHR187272 MLG_2445MLG_2444MLG_2446MLG_0260MLG_2847
ADEH290397 ADEH_2607ADEH_2606ADEH_3361ADEH_2372
ACRY349163 ACRY_1448ACRY_1447ACRY_1664ACRY_1725
ACAU438753 AZC_4317AZC_4318AZC_4289AZC_3913
ABOR393595 ABO_0205ABO_0178ABO_0206ABO_0207ABO_0213
ABAU360910 BAV1937BAV1955BAV1936BAV3180BAV1409
ABAC204669 ACID345_3780ACID345_3778ACID345_1616ACID345_3776
AAVE397945 AAVE_3582AAVE_3583AAVE_3579AAVE_0289AAVE_1328
AAEO224324 AQ_771AQ_924AQ_1907AQ_815


Organism features enriched in list (features available for 277 out of the 297 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Endospores:No 6.406e-2542211
Endospores:Yes 0.00459173453
GC_Content_Range4:0-40 4.229e-2049213
GC_Content_Range4:40-60 3.307e-8138224
GC_Content_Range4:60-100 0.000045189145
GC_Content_Range7:0-30 9.436e-7747
GC_Content_Range7:30-40 3.804e-1242166
GC_Content_Range7:50-60 2.835e-978107
GC_Content_Range7:60-70 1.941e-687134
Genome_Size_Range5:0-2 1.167e-3313155
Genome_Size_Range5:4-6 8.120e-25144184
Genome_Size_Range5:6-10 0.00006393547
Genome_Size_Range9:1-2 4.092e-2413128
Genome_Size_Range9:2-3 0.000081839120
Genome_Size_Range9:3-4 0.00692394677
Genome_Size_Range9:4-5 6.548e-97196
Genome_Size_Range9:5-6 1.067e-137388
Genome_Size_Range9:6-8 0.00003483038
Gram_Stain:Gram_Neg 1.847e-24218333
Gram_Stain:Gram_Pos 8.928e-1138150
Habitat:Host-associated 0.000049976206
Habitat:Multiple 9.793e-6108178
Habitat:Specialized 0.00334441653
Habitat:Terrestrial 0.00134512331
Motility:No 2.104e-1334151
Motility:Yes 3.206e-13170267
Optimal_temp.:- 0.0019762138257
Optimal_temp.:25-30 0.00012261719
Optimal_temp.:30-37 0.0050338318
Optimal_temp.:35-37 0.00005411313
Optimal_temp.:37 0.004310239106
Oxygen_Req:Anaerobic 8.594e-629102
Oxygen_Req:Facultative 0.0000156119201
Pathogenic_in:Animal 0.00043584466
Shape:Coccobacillus 0.00025051111
Shape:Coccus 2.697e-91582
Shape:Rod 1.250e-23223347
Shape:Sphere 0.0030788319
Shape:Spiral 0.0000335534
Temp._range:Hyperthermophilic 0.0003894323
Temp._range:Mesophilic 0.0048710236473
Temp._range:Psychrophilic 0.001151499
Temp._range:Thermophilic 0.0038204935



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 98
Effective number of orgs (counting one per cluster within 468 clusters): 81

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TPET390874 ncbi Thermotoga petrophila RKU-11
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354051
SSP387093 ncbi Sulfurovum sp. NBC37-11
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PAST100379 Onion yellows phytoplasma0
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MSYN262723 ncbi Mycoplasma synoviae 530
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  EG11192   EG10965   EG10863   EG10808   EG10004   
WSUC273121 WS0188
WPIP955 WD_0439
WPIP80849 WB_0879
UURE95667
UURE95664
UPAR505682
TPET390874 TPET_0987
TPAL243276
TMAR243274 TM_1691
TDEN326298
TDEN243275 TDE_1086
SSP387093 SUN_2210
PMAR167542 P9515ORF_0321
PMAR167540 PMM0275
PMAR167539 PRO_0465
PAST100379
NSP387092
NSEN222891 NSE_0726
NPHA348780 NP1256A
MSYN262723
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAR444158 MMARC6_1182
MMAR426368 MMARC7_0736
MMAR402880 MMARC5_0085
MMAR368407 MEMAR_1001
MMAR267377 MMP1492
MLAB410358 MLAB_0317
MJAN243232 MJ_1109
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_1108
MGEN243273
MFLO265311
MCAP340047
MART243272
MAEO419665 MAEO_0561
LINT267671 LIC_11076
LINT189518 LA2987
LDEL390333 LDB1415
LDEL321956 LBUL_1312
LBIF456481 LEPBI_I2428
LBIF355278 LBF_2358
HWAL362976 HQ3229A
HSP64091 VNG2118G
HSAL478009 OE3953R
HPYL85963
HPYL357544
HPY
HMUK485914 HMUK_0849
HMAR272569 RRNAC2521
HHEP235279
HAUR316274 HAUR_4826
HACI382638
GVIO251221 GLR1079
ERUM302409
ERUM254945
ECHA205920 ECH_0322
ECAN269484 ECAJ_0681
CTRA471473 CTLON_0214
CTRA471472 CTL0214
CSUL444179
CPRO264201 PC0660
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161 TC_0230
CMET456442 MBOO_0841
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CHOM360107
CFET360106
CFEL264202 CF0252
CCUR360105
CCON360104 CCC13826_0545
CCAV227941 CCA_00132
CABO218497
BXEN266265
BGAR290434 BG0843
BBUR224326 BB_0818
BAPH372461
BAPH198804 BUSG419
BAFZ390236 BAPKO_0871
AYEL322098
AURANTIMONAS
APHA212042 APH_0170
AMAR234826
ALAI441768 ACL_0304
ABUT367737
AAUR290340 AAUR_2570


Organism features enriched in list (features available for 91 out of the 98 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Singles 0.003174056286
Disease:Pharyngitis 2.694e-788
Disease:bronchitis_and_pneumonitis 2.694e-788
Endospores:No 0.000192948211
GC_Content_Range4:0-40 1.627e-959213
GC_Content_Range4:40-60 0.001650223224
GC_Content_Range4:60-100 0.00007339145
GC_Content_Range7:0-30 1.395e-82347
GC_Content_Range7:30-40 0.004317636166
GC_Content_Range7:50-60 4.046e-63107
GC_Content_Range7:60-70 0.00033329134
Genome_Size_Range5:0-2 4.014e-2567155
Genome_Size_Range5:2-4 0.000287517197
Genome_Size_Range5:4-6 7.943e-115184
Genome_Size_Range9:0-1 6.219e-111927
Genome_Size_Range9:1-2 8.665e-1348128
Genome_Size_Range9:3-4 0.0065314577
Genome_Size_Range9:4-5 0.0001369496
Genome_Size_Range9:5-6 1.648e-6188
Genome_Size_Range9:6-8 0.0095155138
Gram_Stain:Gram_Pos 1.079e-93150
Habitat:Host-associated 5.816e-651206
Habitat:Multiple 0.000186414178
Motility:No 0.008053315151
Optimal_temp.:37 0.000095530106
Optimal_temp.:42 0.003697533
Oxygen_Req:Aerobic 0.002455918185
Oxygen_Req:Facultative 0.002042220201
Oxygen_Req:Microaerophilic 8.654e-61118
Pathogenic_in:No 0.008662826226
Pathogenic_in:Ruminant 0.003697533
Salinity:Extreme_halophilic 0.001282257
Shape:Coccus 0.0010822482
Shape:Rod 1.296e-1125347
Shape:Sphere 6.131e-101519
Shape:Spiral 5.058e-152534



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462110.6162
PWY-5918 (heme biosynthesis I)2722220.5983
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951770.5824
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002330.5788
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181890.5732
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862250.5718
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491440.5497
PWY-1269 (CMP-KDO biosynthesis I)3252400.5473
PWY-4041 (γ-glutamyl cycle)2792160.5364
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392440.5316
TYRFUMCAT-PWY (tyrosine degradation I)1841630.5303
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251860.5268
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482470.5249
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912200.5235
PWY-5386 (methylglyoxal degradation I)3052260.5182
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962210.5141
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831570.4922
PWY-5913 (TCA cycle variation IV)3012200.4920
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902140.4880
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222720.4869
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162690.4823
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551950.4800
PWY-5340 (sulfate activation for sulfonation)3852550.4727
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982600.4701
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911580.4666
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911580.4666
PROSYN-PWY (proline biosynthesis I)4752880.4648
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652450.4632
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081660.4555
PWY-5028 (histidine degradation II)1301190.4510
VALDEG-PWY (valine degradation I)2902080.4494
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491870.4481
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491870.4481
GLUTAMINDEG-PWY (glutamine degradation I)1911550.4457
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002120.4437
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761460.4433
PWY-5194 (siroheme biosynthesis)3122170.4388
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112160.4354
GALACTARDEG-PWY (D-galactarate degradation I)1511300.4351
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292240.4323
AST-PWY (arginine degradation II (AST pathway))1201100.4302
PWY-5964 (molybdopterin guanine dinucleotide biosynthesis)2902050.4301
PWY0-862 (cis-dodecenoyl biosynthesis)3432300.4295
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262220.4285
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561320.4275
PWY-6317 (galactose degradation I (Leloir pathway))4642790.4261
DAPLYSINESYN-PWY (lysine biosynthesis I)3422290.4260
GLUCARDEG-PWY (D-glucarate degradation I)1521290.4231
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582760.4200
PWY-5148 (acyl-CoA hydrolysis)2271710.4193
GLUCONSUPER-PWY (D-gluconate degradation)2291720.4188
PWY-6196 (serine racemization)102960.4115
REDCITCYC (TCA cycle variation II)1741400.4087
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2892010.4075
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)1351160.4028
GLYOXYLATE-BYPASS (glyoxylate cycle)1691360.4007



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10965   EG10863   EG10808   EG10004   
EG111920.9999410.9997150.9994420.9995
EG109650.9993590.9989230.999488
EG108630.999340.998929
EG108080.999263
EG10004



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PAIRWISE BLAST SCORES:

  EG11192   EG10965   EG10863   EG10808   EG10004   
EG111920.0f0----
EG10965-0.0f0---
EG10863--0.0f0--
EG10808---0.0f0-
EG10004----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis) (degree of match pw to cand: 0.036, degree of match cand to pw: 0.400, average score: 0.550)
  Genes in pathway or complex:
             0.1549 0.0002 EG10449 (hisG) ATPPHOSRIBOSTRANS-MONOMER (HisG)
             0.4481 0.0664 EG10451 (hisI) HISTCYCLOPRATPPHOS (phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase)
             0.4488 0.0933 EG10444 (hisA) PRIBFAICARPISOM-MONOMER (N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase)
             0.4214 0.1210 EG10448 (hisF) CYCLASE-MONOMER (imidazole glycerol phosphate synthase, HisF subunit)
             0.4628 0.1357 EG10450 (hisH) GLUTAMIDOTRANS-MONOMER (imidazole glycerol phosphate synthase, HisH subunit)
             0.6545 0.1192 EG10445 (hisB) IMIDPHOSPHADEHYDHISTIDPHOSPHA-MONOMER (HisB)
             0.0917 0.0030 EG10446 (hisC) HISTPHOSTRANS-MONOMER (HisC)
             0.1301 0.0027 EG10447 (hisD) HISTDEHYD-MONOMER (HisD)
             0.4175 0.1716 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)
             0.0766 0.0012 EG11314 (purB) ASL-MONOMER (5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase [multifunctional])
             0.1188 0.0576 EG10032 (adk) ADENYL-KIN-MONOMER (adenylate kinase)
             0.1195 0.0541 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.1926 0.0529 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.3903 0.2524 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.3140 0.1507 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.4421 0.2304 EG20257 (nrdE) NRDE-MONOMER (NrdE)
             0.9614 0.8998 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
             0.9646 0.9063 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
             0.9691 0.9352 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
             0.9708 0.9247 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
             0.9759 0.9513 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
             0.9946 0.9909 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
             0.9769 0.9422 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
             0.9696 0.9281 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
             0.3659 0.0004 EG10421 (guaB) IMP-DEHYDROG-MONOMER (GuaB)
             0.3208 0.0480 EG10420 (guaA) GMP-SYN-MONOMER (GMP synthetase)
   *in cand* 0.9995 0.9989 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)
             0.5085 0.1475 EG10791 (purC) SAICARSYN-MONOMER (PurC)
             0.8586 0.6416 EG10795 (purH) AICARTRANSIMPCYCLO-CPLX (AICAR transformylase / IMP cyclohydrolase)
             0.7232 0.4428 EG10793 (purE) PURE-MONOMER (PurE)
             0.7019 0.4756 EG10796 (purK) PURK-MONOMER (N5-carboxyaminoimidazole ribonucleotide synthetase monomer)
             0.5603 0.0019 EG10794 (purF) PRPPAMIDOTRANS-MONOMER (PurF)
             0.9224 0.8621 EG10792 (purD) GLYCRIBONUCSYN-MONOMER (phosphoribosylamine-glycine ligase)
             0.5282 0.3499 EG10797 (purL) FGAMSYN-MONOMER (phosphoribosylformylglycinamide synthetase)
             0.5148 0.0575 EG10798 (purM) AIRS-MONOMER (PurM)
             0.1634 0.0003 EG11809 (purT) GARTRANSFORMYL2-MONOMER (phosphoribosylglycinamide formyltransferase 2)
             0.6301 0.0011 EG11539 (pyrH) UMPKI-MONOMER (PyrH)
             0.3133 0.0721 EG10810 (pyrG) CTPSYN-MONOMER (PyrG)
             0.4310 0.0449 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
             0.8173 0.3222 EG10134 (carA) CARBPSYN-SMALL (CarA)
             0.8347 0.2753 EG10135 (carB) CARBPSYN-LARGE (CarB)
             0.8972 0.8064 EG10811 (pyrI) ASPCARBREG-MONOMER (aspartate carbamoyltransferase, PyrI subunit)
             0.9418 0.7248 EG10805 (pyrB) ASPCARBCAT-MONOMER (aspartate carbamoyltransferase, PyrB subunit)
             0.3262 0.0353 EG10806 (pyrC) DIHYDROOROT-MONOMER (PyrC)
   *in cand* 0.9994 0.9989 EG10808 (pyrE) OROPRIBTRANS-MONOMER (PyrE)
             0.8976 0.7109 EG10809 (pyrF) OROTPDECARB-MONOMER (PyrF)
             0.5145 0.3248 EG10807 (pyrD) DIHYDROOROTOX-MONOMER (dihydroorotate dehydrogenase)
             0.0455 0.0018 EG10774 (prs) PRPPSYN-MONOMER (ribose-phosphate diphosphokinase)
             0.9978 0.9934 EG10723 (phnN) EG10723-MONOMER (ribose 1,5-bisphosphokinase)
             0.6328 0.3526 EG10220 (deoB) PPENTOMUT-MONOMER (phosphopentomutase)
             0.5685 0.2848 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.1999 0.0384 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.4180 0.1954 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.9868 0.9679 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7511 0.4621 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9989 EG10004 (dfp) EG10004-MONOMER (Dfp)
   *in cand* 0.9995 0.9989 EG10863 (rph) EG10863-MONOMER (RNase PH monomer)
   *in cand* 0.9997 0.9994 EG11192 (yicC) EG11192-MONOMER (conserved protein)
   This pathway has holes



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10808 EG10863 EG11192 (centered at EG10863)
EG10965 (centered at EG10965)
EG10004 (centered at EG10004)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11192   EG10965   EG10863   EG10808   EG10004   
327/623416/623406/623401/623419/623
AAEO224324:0:Tyes0-10780428
AAUR290340:2:Tyes--0--
AAVE397945:0:Tyes32373238323401023
ABAC204669:0:Tyes218021780-2176
ABAU360910:0:Tyes52554252417770
ABOR393595:0:Tyes270282935
ACAU438753:0:Tyes415416387-0
ACEL351607:0:Tyes--393-0
ACRY349163:8:Tyes10217-281
ADEH290397:0:Tyes2402391002-0
AEHR187272:0:Tyes21702169217102572
AFER243159:0:Tyes169616950-1891
AFUL224325:0:Tyes--01235-
AHYD196024:0:Tyes4030040294028109
ALAI441768:0:Tyes-0---
AMAR329726:9:Tyes-532927072920
AMET293826:0:Tyes17951793031481791
ANAE240017:0:Tyes--02052-
AORE350688:0:Tyes8598610-863
APER272557:0:Tyes--0940-
APHA212042:0:Tyes-0---
APLE416269:0:Tyes121102701958
APLE434271:0:Tno121302751980
ASAL382245:5:Tyes58059604044
ASP1667:3:Tyes--335-0
ASP232721:2:Tyes6837046800758
ASP62928:0:Tyes28582851286125600
ASP62977:0:Tyes-3047032272859
ASP76114:2:Tyes862155286514570
AVAR240292:3:Tyes-011988842342
BABO262698:0:Tno----0
BABO262698:1:Tno3033040--
BAFZ390236:2:Fyes0----
BAMB339670:3:Tno120-1752
BAMB398577:3:Tno120-1593
BAMY326423:0:Tyes02994-4
BANT260799:0:Tno4-656130
BANT261594:2:Tno4-677130
BANT568206:2:Tyes10-4052014
BANT592021:2:Tno42687130
BAPH198804:0:Tyes-0---
BBAC264462:0:Tyes536-15930-
BBAC360095:0:Tyes-0--782
BBRO257310:0:Tyes78679578523830
BBUR224326:21:Fno0----
BCAN483179:0:Tno----0
BCAN483179:1:Tno2772780--
BCEN331271:2:Tno120-1408
BCEN331272:3:Tyes120-1514
BCER226900:1:Tyes4-619140
BCER288681:0:Tno3100-370203096
BCER315749:1:Tyes4266780
BCER405917:1:Tyes3041-368203037
BCER572264:1:Tno3258-386803254
BCIC186490:0:Tyes600-6163
BCLA66692:0:Tyes--345-0
BFRA272559:1:Tyes2976--02333
BFRA295405:0:Tno3242--02508
BGAR290434:2:Fyes0----
BHAL272558:0:Tyes42572-0
BHEN283166:0:Tyes-477--0
BHER314723:0:Fyes6---0
BJAP224911:0:Fyes343134320750887
BLIC279010:0:Tyes11131179015
BLON206672:0:Tyes--0496-
BMAL243160:1:Tno102-133
BMAL320388:1:Tno120-1799
BMAL320389:1:Tyes102-147
BMEL224914:0:Tno----0
BMEL224914:1:Tno10310--
BMEL359391:0:Tno----0
BMEL359391:1:Tno2862870--
BOVI236:0:Tyes----0
BOVI236:1:Tyes-2670--
BPAR257311:0:Tno-96795819960
BPER257313:0:Tyes10931084109401235
BPET94624:0:Tyes18581839185902412
BPSE272560:1:Tyes167216711673-0
BPSE320372:1:Tno201020092011-0
BPSE320373:1:Tno190419031905-0
BPUM315750:0:Tyes10121019014
BQUI283165:0:Tyes-385--0
BSP107806:2:Tyes-0-125-
BSP36773:2:Tyes120-1780
BSP376:0:Tyes30683069936210
BSUB:0:Tyes11131329015
BSUI204722:0:Tyes----0
BSUI204722:1:Tyes2782790--
BSUI470137:0:Tno----0
BSUI470137:1:Tno3053060--
BTHA271848:1:Tno804805803-0
BTHE226186:0:Tyes658---0
BTHU281309:1:Tno3055-365503051
BTHU412694:1:Tno4-557120
BTRI382640:1:Tyes-690--0
BTUR314724:0:Fyes6---0
BVIE269482:7:Tyes120-1662
BWEI315730:4:Tyes4-624150
CACE272562:1:Tyes17081710-01712
CAULO:0:Tyes155115520-3614
CBEI290402:0:Tyes131133-0135
CBLO203907:0:Tyes02---
CBLO291272:0:Tno24--0
CBOT36826:1:Tno42--0
CBOT441770:0:Tyes42--0
CBOT441771:0:Tno42--0
CBOT441772:1:Tno42--0
CBOT498213:1:Tno42--0
CBOT508765:1:Tyes75375502107757
CBOT515621:2:Tyes42--0
CBOT536232:0:Tno42--0
CBUR227377:1:Tyes120-563
CBUR360115:1:Tno120-615
CBUR434922:2:Tno800799801-0
CCAV227941:1:Tyes---0-
CCHL340177:0:Tyes0---162
CCON360104:2:Tyes-0---
CDES477974:0:Tyes15681566147501564
CDIF272563:1:Tyes32723-0
CDIP257309:0:Tyes--5267620
CEFF196164:0:Fyes--6949080
CFEL264202:1:Tyes--0--
CGLU196627:0:Tyes--0274-
CHUT269798:0:Tyes0---2827
CHYD246194:0:Tyes11421140011471138
CJAP155077:0:Tyes03301132603255
CJEI306537:0:Tyes--3030845
CKLU431943:1:Tyes0-2073-4
CKOR374847:0:Tyes--12260-
CMAQ397948:0:Tyes--0398-
CMET456442:0:Tyes---0-
CMIC31964:2:Tyes--179401722
CMIC443906:2:Tyes--83201331
CMUR243161:1:Tyes--0--
CNOV386415:0:Tyes42--0
CPEL335992:0:Tyes-312--0
CPER195102:1:Tyes42552-0
CPER195103:0:Tno42494-0
CPER289380:3:Tyes42484-0
CPHY357809:0:Tyes594--0-
CPRO264201:0:Fyes0----
CPSY167879:0:Tyes047375675
CRUT413404:0:Tyes-0-405218
CSAL290398:0:Tyes2312572302280
CSP501479:6:Fyes----0
CSP501479:7:Fyes--0--
CSP501479:8:Fyes4041-0-
CSP78:2:Tyes236223630-4940
CTEP194439:0:Tyes38---0
CTET212717:0:Tyes01--2
CTRA471472:0:Tyes--0--
CTRA471473:0:Tno--0--
CVES412965:0:Tyes-0-363207
CVIO243365:0:Tyes80272279912200
DARO159087:0:Tyes37583755376103048
DDES207559:0:Tyes2725--30200
DETH243164:0:Tyes--8277320
DGEO319795:1:Tyes--193902166
DHAF138119:0:Tyes425031280
DNOD246195:0:Tyes20019258170
DOLE96561:0:Tyes323321-16090
DPSY177439:2:Tyes1628162601682412
DRAD243230:3:Tyes--11230-
DRED349161:0:Tyes02993-4
DSHI398580:5:Tyes011954-1464
DSP216389:0:Tyes--717-0
DSP255470:0:Tno--729-0
DVUL882:1:Tyes0--20352442
ECAN269484:0:Tyes-0---
ECAR218491:0:Tyes89099100103
ECHA205920:0:Tyes-0---
ECOL199310:0:Tno510430
ECOL316407:0:Tno40-58
ECOL331111:6:Tno510430
ECOL362663:0:Tno59430
ECOL364106:1:Tno510430
ECOL405955:2:Tyes59430
ECOL409438:6:Tyes511430
ECOL413997:0:Tno59430
ECOL439855:4:Tno59430
ECOL469008:0:Tno506710
ECOL481805:0:Tno40569
ECOL585034:0:Tno59430
ECOL585035:0:Tno59430
ECOL585055:0:Tno59430
ECOL585056:2:Tno59430
ECOL585057:0:Tno612540
ECOL585397:0:Tno58430
ECOL83334:0:Tno59430
ECOLI:0:Tno59430
ECOO157:0:Tno59430
EFAE226185:3:Tyes189418910569-
EFER585054:1:Tyes68540
ELIT314225:0:Tyes-7210--
ESP42895:1:Tyes40569
FALN326424:0:Tyes--43404080
FJOH376686:0:Tyes0---2750
FMAG334413:1:Tyes02--4
FNOD381764:0:Tyes208206--0
FNUC190304:0:Tyes1831820-989
FPHI484022:1:Tyes-159915301650
FRANT:0:Tno-9663920649
FSP106370:0:Tyes--31402629
FSP1855:0:Tyes--387142880
FSUC59374:0:Tyes0425659489780
FTUL351581:0:Tno-8990137399
FTUL393011:0:Tno-8240126381
FTUL393115:0:Tyes-9493910646
FTUL401614:0:Tyes-3030142736
FTUL418136:0:Tno-0570813461
FTUL458234:0:Tno-8430132397
GBET391165:0:Tyes-21800-132
GFOR411154:0:Tyes2783---0
GKAU235909:1:Tyes8101529012
GMET269799:1:Tyes453452063791
GOXY290633:5:Tyes-0290-1500
GSUL243231:0:Tyes111011096675100
GTHE420246:1:Tyes35154807
GURA351605:0:Tyes108110801890855
GVIO251221:0:Tyes---0-
HARS204773:0:Tyes1841184218380629
HAUR316274:2:Tyes----0
HBUT415426:0:Tyes--4460-
HCHE349521:0:Tyes51405120514251440
HDUC233412:0:Tyes1133701271381
HHAL349124:0:Tyes23013261333
HINF281310:0:Tyes200150510692
HINF374930:0:Tyes04651941951139
HINF71421:0:Tno188144410671
HMAR272569:8:Tyes---0-
HMOD498761:0:Tyes179317960-1798
HMUK485914:1:Tyes---0-
HNEP81032:0:Tyes101140-1093
HSAL478009:4:Tyes---0-
HSOM205914:1:Tyes115713211156-0
HSOM228400:0:Tno324543325-0
HSP64091:2:Tno---0-
HWAL362976:1:Tyes---0-
IHOS453591:0:Tyes--0289-
ILOI283942:0:Tyes22352196223922400
JSP290400:1:Tyes225522540-708
JSP375286:0:Tyes1162116111650652
KPNE272620:2:Tyes1115540
KRAD266940:2:Fyes--43001223
LACI272621:0:Tyes-360--0
LBIF355278:2:Tyes---0-
LBIF456481:2:Tno---0-
LBOR355276:1:Tyes-790-0-
LBOR355277:1:Tno-0-428-
LBRE387344:2:Tyes---11790
LCAS321967:1:Tyes-178-0176
LCHO395495:0:Tyes322033701964
LDEL321956:0:Tyes-0---
LDEL390333:0:Tyes-0---
LGAS324831:0:Tyes-0-318492
LHEL405566:0:Tyes---3480
LINN272626:1:Tno7677660770764
LINT189518:1:Tyes---0-
LINT267671:1:Tno---0-
LINT363253:3:Tyes0--687-
LJOH257314:0:Tyes-592-3830
LLAC272622:5:Tyes-942-0-
LLAC272623:0:Tyes-831-0-
LMES203120:1:Tyes-497-012
LMON169963:0:Tno6196180622616
LMON265669:0:Tyes6036020606600
LPLA220668:0:Tyes-0--2
LPNE272624:0:Tno80680580701282
LPNE297245:1:Fno77677577701198
LPNE297246:1:Fyes79279179301350
LPNE400673:0:Tno80780680801291
LREU557436:0:Tyes-1095-01093
LSAK314315:0:Tyes-0-2722
LSPH444177:1:Tyes012431--
LWEL386043:0:Tyes6546530657651
LXYL281090:0:Tyes--22910420
MABS561007:1:Tyes--0-1344
MACE188937:0:Tyes--01491-
MAEO419665:0:Tyes---0-
MAER449447:0:Tyes-0-4504-
MAQU351348:2:Tyes385202985
MAVI243243:0:Tyes--031951807
MBAR269797:1:Tyes--0974-
MBOV233413:0:Tno--100101053
MBOV410289:0:Tno--99301044
MBUR259564:0:Tyes--0786-
MCAP243233:0:Tyes273224271040
MEXT419610:0:Tyes161416150-3532
MFLA265072:0:Tyes3502436271
MGIL350054:3:Tyes--129102682
MHUN323259:0:Tyes---0-
MJAN243232:2:Tyes---0-
MKAN190192:0:Tyes--0704-
MLAB410358:0:Tyes---0-
MLEP272631:0:Tyes--403-0
MLOT266835:2:Tyes378637871135-0
MMAG342108:0:Tyes5455464296-0
MMAR267377:0:Tyes---0-
MMAR368407:0:Tyes---0-
MMAR394221:0:Tyes011775--
MMAR402880:1:Tyes---0-
MMAR426368:0:Tyes---0-
MMAR444158:0:Tyes---0-
MMAZ192952:0:Tyes--25370-
MPET420662:1:Tyes26142621261102476
MSED399549:0:Tyes--01877-
MSME246196:0:Tyes--182934280
MSP164756:1:Tno--148627830
MSP164757:0:Tno--142731080
MSP189918:2:Tyes--151128230
MSP266779:3:Tyes102259-2298
MSP400668:0:Tyes38123834381104
MSP409:2:Tyes101016-2963
MSTA339860:0:Tyes--2150-
MSUC221988:0:Tyes21544101747
MTBCDC:0:Tno--104601102
MTBRV:0:Tno--97401025
MTHE187420:0:Tyes--01176-
MTHE264732:0:Tyes358-0-361
MTHE349307:0:Tyes--550-
MTUB336982:0:Tno--98301033
MTUB419947:0:Tyes--99801052
MVAN350058:0:Tyes--160630660
MXAN246197:0:Tyes26022601025342306
NARO279238:0:Tyes-4161492-0
NEUR228410:0:Tyes22322014014801208
NEUT335283:2:Tyes203029901712469
NFAR247156:2:Tyes--043482541
NGON242231:0:Tyes237116484901161
NHAM323097:2:Tyes222622251013950
NMEN122586:0:Tno09127531116909
NMEN122587:0:Tyes3121265104201262
NMEN272831:0:Tno293107794901074
NMEN374833:0:Tno316120610440-
NMUL323848:3:Tyes130141722069
NOCE323261:1:Tyes0251145620082002
NPHA348780:2:Tyes---0-
NSEN222891:0:Tyes-0---
NSP103690:6:Tyes-37050833072
NSP35761:1:Tyes--030481125
NWIN323098:0:Tyes166216611531120
OANT439375:5:Tyes4044050-1159
OCAR504832:0:Tyes195219510315376
OIHE221109:0:Tyes-761909
OTSU357244:0:Fyes-3240--
PABY272844:0:Tyes--0501-
PACN267747:0:Tyes--6730-
PAER178306:0:Tyes--0796-
PAER208963:0:Tyes151614110
PAER208964:0:Tno151614110
PARC259536:0:Tyes-014330111
PARS340102:0:Tyes--2490-
PATL342610:0:Tyes4272303427142700
PCAR338963:0:Tyes0176043741
PCRY335284:1:Tyes-015131115
PDIS435591:0:Tyes0---538
PENT384676:0:Tyes78640
PFLU205922:0:Tyes89740
PFLU216595:1:Tyes89740
PFLU220664:0:Tyes89740
PFUR186497:0:Tyes--5490-
PGIN242619:0:Tyes0---1158
PHAL326442:1:Tyes1401411391380
PHOR70601:0:Tyes--4510-
PING357804:0:Tyes34083379323532340
PINT246198:0:Tyes----0
PINT246198:1:Tyes0----
PISL384616:0:Tyes--3280-
PLUM243265:0:Fyes46880468746864683
PLUT319225:0:Tyes0---125
PMAR146891:0:Tyes-225-0-
PMAR167539:0:Tyes-0---
PMAR167540:0:Tyes---0-
PMAR167542:0:Tyes---0-
PMAR167546:0:Tyes-192-0-
PMAR167555:0:Tyes-174-0-
PMAR59920:0:Tno-164-0-
PMAR74546:0:Tyes-196-0-
PMAR74547:0:Tyes--039-
PMAR93060:0:Tyes-256-0-
PMEN399739:0:Tyes1011960
PMOB403833:0:Tyes02--502
PMUL272843:1:Tyes9530954955231
PNAP365044:8:Tyes648647-01029
PPEN278197:0:Tyes-0--2
PPRO298386:2:Tyes607810
PPUT160488:0:Tno1011960
PPUT351746:0:Tyes89740
PPUT76869:0:Tno78640
PRUM264731:0:Tyes95---0
PSP117:0:Tyes3809-30370-
PSP296591:2:Tyes11161115111902952
PSP312153:0:Tyes102934668
PSP56811:2:Tyes-851730290
PSTU379731:0:Tyes102511
PSYR205918:0:Tyes102510
PSYR223283:2:Tyes102510
PTHE370438:0:Tyes10361034010431032
PTOR263820:0:Tyes--1960-
RAKA293614:0:Fyes-1920--
RALB246199:0:Tyes722724-02828
RBEL336407:0:Tyes-0482--
RBEL391896:0:Fno-7170--
RCAN293613:0:Fyes-6540--
RCAS383372:0:Tyes--515-0
RCON272944:0:Tno-2260--
RDEN375451:4:Tyes2067206802629715
RETL347834:5:Tyes10961097211320
REUT264198:3:Tyes22992298230202575
REUT381666:2:Tyes72172271802747
RFEL315456:2:Tyes-8440--
RFER338969:1:Tyes01521323021021
RLEG216596:6:Tyes12111212231460
RMAS416276:1:Tyes-1470--
RMET266264:2:Tyes70570670202724
RPAL258594:0:Tyes3005300425146840
RPAL316055:0:Tyes2923292204429114
RPAL316056:0:Tyes197619770454155
RPAL316057:0:Tyes279527941897580
RPAL316058:0:Tyes206520660430200
RPOM246200:1:Tyes189818990-390
RPRO272947:0:Tyes-1300--
RRIC392021:0:Fno-2080--
RRIC452659:0:Tyes-2060--
RRUB269796:1:Tyes013202-3357
RSAL288705:0:Tyes--01933484
RSOL267608:1:Tyes20592058206202368
RSP101510:3:Fyes--040725709
RSP357808:0:Tyes--441-0
RSPH272943:4:Tyes10141013235801719
RSPH349101:2:Tno988987231901680
RSPH349102:5:Tyes77477523150160
RTYP257363:0:Tno-1320--
RXYL266117:0:Tyes-0-821-
SACI330779:0:Tyes--0951-
SACI56780:0:Tyes0-136223461307
SAGA205921:0:Tno-0-723-
SAGA208435:0:Tno-0-713-
SAGA211110:0:Tyes-0-776-
SALA317655:1:Tyes-29290-2956
SARE391037:0:Tyes--0-848
SAUR158878:1:Tno-0--2
SAUR158879:1:Tno-0--2
SAUR196620:0:Tno-0--2
SAUR273036:0:Tno-0--2
SAUR282458:0:Tno-0--2
SAUR282459:0:Tno-0--2
SAUR359786:1:Tno-0--2
SAUR359787:1:Tno-0--2
SAUR367830:3:Tno-0--2
SAUR418127:0:Tyes-0--2
SAUR426430:0:Tno-0--1
SAUR93061:0:Fno-0--2
SAUR93062:1:Tno-0--2
SAVE227882:1:Fyes-238866202390
SBAL399599:3:Tyes200212227
SBAL402882:1:Tno140151621
SBOY300268:1:Tyes582430
SCO:2:Fyes-014462199-
SDEG203122:0:Tyes12231105
SDEN318161:0:Tyes03185127
SDYS300267:1:Tyes610540
SELO269084:0:Tyes-01191185-
SENT209261:0:Tno40569
SENT220341:0:Tno40569
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