CANDIDATE ID: 774

CANDIDATE ID: 774

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9905100e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7287 (eutM) (b2457)
   Products of gene:
     - G7287-MONOMER (predicted structural protein, ethanolamine utilization microcompartment)
     - CPLX0-7835 (predicted structural protein, ethanolamine utilization microcompartment)

- G7286 (eutN) (b2456)
   Products of gene:
     - G7286-MONOMER (predicted carboxysome structural protein)
     - CPLX0-7613 (predicted carboxysome structural protein)

- G7285 (eutE) (b2455)
   Products of gene:
     - G7285-MONOMER (predicted aldehyde dehydrogenase, ethanolamine utilization protein)

- G7284 (eutJ) (b2454)
   Products of gene:
     - G7284-MONOMER (predicted chaperonin, ethanolamine utilization protein)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 79
Effective number of orgs (counting one per cluster within 468 clusters): 47

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80813
TSP1755 Thermoanaerobacter sp.4
TELO197221 ncbi Thermosynechococcus elongatus BP-13
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSON300269 ncbi Shigella sonnei Ss0464
SGLO343509 ncbi Sodalis glossinidius morsitans3
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SBOY300268 ncbi Shigella boydii Sb2274
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
PSP117 Pirellula sp.3
NSP35761 Nocardioides sp.4
MSP189918 ncbi Mycobacterium sp. KMS3
MSP164757 ncbi Mycobacterium sp. JLS3
MSP164756 ncbi Mycobacterium sp. MCS3
MSME246196 ncbi Mycobacterium smegmatis MC2 1553
MPET420662 ncbi Methylibium petroleiphilum PM14
MAQU351348 ncbi Marinobacter aquaeolei VT84
MAER449447 ncbi Microcystis aeruginosa NIES-8433
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53344
LSPH444177 ncbi Lysinibacillus sphaericus C3-413
LREU557436 ncbi Lactobacillus reuteri DSM 200164
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LINN272626 ncbi Listeria innocua Clip112624
LBRE387344 ncbi Lactobacillus brevis ATCC 3673
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255864
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5833
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
DRED349161 ncbi Desulfotomaculum reducens MI-14
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
CTET212717 ncbi Clostridium tetani E883
CPHY357809 ncbi Clostridium phytofermentans ISDg4
CPER195103 ncbi Clostridium perfringens ATCC 131243
CPER195102 ncbi Clostridium perfringens 133
CNOV386415 ncbi Clostridium novyi NT4
CKLU431943 ncbi Clostridium kluyveri DSM 5554
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CDIF272563 ncbi Clostridium difficile 6303
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto4
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT498213 ncbi Clostridium botulinum B1 str. Okra4
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
AORE350688 ncbi Alkaliphilus oremlandii OhILAs4
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AMAR329726 ncbi Acaryochloris marina MBIC110173


Names of the homologs of the genes in the group in each of these orgs
  G7287   G7286   G7285   G7284   
YENT393305 YE2735YE2739YE2741
TSP1755 TETH514_1955TETH514_1944TETH514_1942TETH514_1946
TELO197221 TLL0947TLL0945TLR0227
STYP99287 STM2465STM2464STM2463STM2462
SSP321332 CYB_1797CYB_1795CYB_0241
SSP321327 CYA_1611CYA_1613CYA_0473
SSON300269 SSO_2537SSO_2536SSO_2535SSO_2534
SGLO343509 SG1884SG1372SG1883
SENT454169 SEHA_C2725SEHA_C2724SEHA_C2723SEHA_C2722
SENT321314 SCH_2461SCH_2460SCH_2459SCH_2458
SENT295319 SPA0403SPA0404SPA0405SPA0406
SENT220341 STY2701STY2701STY2700STY2699
SENT209261 T0394T0394T0395T0396
SBOY300268 SBO_2472SBO_2471SBO_2470SBO_2469
RRUB269796 RRU_A0905RRU_A0912RRU_A0914RRU_A0910
RPAL316056 RPC_1165RPC_1172RPC_1174RPC_1170
PSP117 RB2586RB2581RB2579
NSP35761 NOCA_4030NOCA_4036NOCA_4833NOCA_4028
MSP189918 MKMS_0202MKMS_0203MKMS_0206
MSP164757 MJLS_0182MJLS_0183MJLS_0186
MSP164756 MMCS_0193MMCS_0194MMCS_0197
MSME246196 MSMEG_0272MSMEG_0273MSMEG_0276
MPET420662 MPE_B0501MPE_B0502MPE_B0500MPE_B0499
MAQU351348 MAQU_1232MAQU_1234MAQU_1235MAQU_1236
MAER449447 MAE_47940MAE_47920MAE_49340
LWEL386043 LWE1138LWE1142LWE1123LWE1119
LSPH444177 BSPH_2104BSPH_2107BSPH_2103
LREU557436 LREU_1741LREU_1738LREU_1735LREU_1751
LMON265669 LMOF2365_1190LMOF2365_1194LMOF2365_1173LMOF2365_1169
LMON169963 LMO1180LMO1184LMO1165LMO1161
LINN272626 LIN1144LIN1148LIN1129LIN1125
LBRE387344 LVIS_1617LVIS_1979LVIS_1603
KPNE272620 GKPORF_B2110GKPORF_B2109GKPORF_B2108GKPORF_B2107
FNUC190304 FN0083FN0087FN0084FN1783
EFER585054 EFER_0722EFER_0723EFER_0724EFER_0725
EFAE226185 EF_1623EF_1619EF_0900
ECOO157 CCHACCHBEUTEEUTJ
ECOL83334 ECS3319ECS3318ECS3317ECS3316
ECOL585397 ECED1_2890ECED1_2889ECED1_2888ECED1_2887
ECOL585057 ECIAI39_2594ECIAI39_2593ECIAI39_2592ECIAI39_2591
ECOL585056 ECUMN_2769ECUMN_2768ECUMN_2767ECUMN_2766
ECOL585055 EC55989_2737EC55989_2736EC55989_2735EC55989_2734
ECOL585035 ECS88_4677ECS88_2635ECS88_2634ECS88_2633
ECOL585034 ECIAI1_2505ECIAI1_2504ECIAI1_2503ECIAI1_2502
ECOL481805 ECOLC_1220ECOLC_1221ECOLC_1222ECOLC_1223
ECOL469008 ECBD_1233ECBD_1234ECBD_1235ECBD_1236
ECOL439855 ECSMS35_2603ECSMS35_2602ECSMS35_2601ECSMS35_2600
ECOL413997 ECB_02348ECB_02347ECB_02346ECB_02345
ECOL409438 ECSE_2738ECSE_2737ECSE_2736ECSE_2735
ECOL405955 APECO1_4100APECO1_4101APECO1_4102APECO1_4103
ECOL364106 UTI89_C2781UTI89_C2780UTI89_C2779UTI89_C2778
ECOL362663 ECP_2469ECP_2468ECP_2467ECP_2466
ECOL331111 ECE24377A_2734ECE24377A_2733ECE24377A_2732ECE24377A_2731
ECOL316407 ECK2452:JW2441:B2457ECK2451:JW2440:B2456ECK2450:JW2439:B2455ECK2449:JW2438:B2454
ECOL199310 C2982C2981C2980C2979
DRED349161 DRED_1299DRED_3271DRED_3266DRED_3273
DPSY177439 DP3045DP3029DP3028DP3038
DHAF138119 DSY4991DSY0412DSY4993DSY5000
DDES207559 DDE_3270DDE_3273DDE_3279DDE_3275
CTET212717 CTC_01442CTC_01366CTC_01444
CPHY357809 CPHY_1182CPHY_2637CPHY_1178CPHY_1423
CPER195103 CPF_0896CPF_0900CPF_2855
CPER195102 CPE0903CPE0907CPE2531
CNOV386415 NT01CX_0494NT01CX_0487NT01CX_0488NT01CX_0490
CKLU431943 CKL_0842CKL_0849CKL_1614CKL_0847
CHYD246194 CHY_0685CHY_0688CHY_0686
CDIF272563 CD1918CD1922CD1917
CBOT536232 CLM_2314CLM_2319CLM_2316CLM_2321
CBOT515621 CLJ_B2310CLJ_B2315CLJ_B0401CLJ_B2317
CBOT508765 CLL_A1467CLL_A1747CLL_A1748CLL_A1458
CBOT498213 CLD_2535CLD_2530CLD_0407CLD_2528
CBOT441772 CLI_2149CLI_2154CLI_0416CLI_2156
CBOT441771 CLC_2048CLC_2053CLC_2050CLC_2055
CBOT441770 CLB_2043CLB_2048CLB_2045CLB_2050
CBOT36826 CBO2106CBO2111CBO2108CBO2113
CBEI290402 CBEI_4058CBEI_4055CBEI_3832CBEI_4046
AORE350688 CLOS_2385CLOS_0371CLOS_2387CLOS_2393
AMET293826 AMET_3822AMET_0265AMET_3824AMET_0263
AMAR329726 AM1_5380AM1_5382AM1_0442


Organism features enriched in list (features available for 74 out of the 79 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00728831992
Arrangment:Pairs 4.553e-833112
Arrangment:Singles 0.009613645286
Disease:Botulism 0.000029255
Disease:Gastroenteritis 0.0024744613
Disease:Urinary_tract_infection 0.000241544
Endospores:Yes 0.00001491853
GC_Content_Range4:40-60 0.000665841224
GC_Content_Range4:60-100 0.00083638145
GC_Content_Range7:0-30 0.00068451447
GC_Content_Range7:30-40 0.001831511166
GC_Content_Range7:50-60 5.479e-832107
GC_Content_Range7:60-70 0.00257028134
Genome_Size_Range5:0-2 5.840e-101155
Genome_Size_Range5:4-6 2.048e-1048184
Genome_Size_Range9:1-2 6.321e-81128
Genome_Size_Range9:4-5 3.922e-62796
Genome_Size_Range9:5-6 0.00077532188
Gram_Stain:Gram_Pos 0.002511529150
Habitat:Multiple 0.000521535178
Motility:No 0.00013207151
Motility:Yes 3.477e-652267
Optimal_temp.:37 2.742e-629106
Oxygen_Req:Aerobic 5.579e-94185
Oxygen_Req:Anaerobic 0.005063921102
Oxygen_Req:Facultative 0.000014842201
Pathogenic_in:Human 0.004043837213
Shape:Coccus 0.0005698282
Shape:Rod 3.224e-1067347
Temp._range:Mesophilic 0.003894968473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 509
Effective number of orgs (counting one per cluster within 468 clusters): 390

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317581
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329531
YPES386656 ncbi Yersinia pestis Pestoides F1
YPES377628 ncbi Yersinia pestis Nepal5161
YPES360102 ncbi Yersinia pestis Antiqua1
YPES349746 ncbi Yersinia pestis Angola1
YPES214092 ncbi Yersinia pestis CO921
YPES187410 ncbi Yersinia pestis KIM 101
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP61
VVUL196600 ncbi Vibrio vulnificus YJ0161
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106331
VFIS312309 ncbi Vibrio fischeri ES1141
VCHO345073 ncbi Vibrio cholerae O3951
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169611
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP94122 ncbi Shewanella sp. ANA-31
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP292414 ncbi Ruegeria sp. TM10400
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB31
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPRO399741 ncbi Serratia proteamaculans 5681
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1591
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SLAC55218 Ruegeria lacuscaerulensis0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis1
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SDEN318161 ncbi Shewanella denitrificans OS2171
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)0
SBAL402882 ncbi Shewanella baltica OS1851
SBAL399599 ncbi Shewanella baltica OS1951
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RSOL267608 ncbi Ralstonia solanacearum GMI10001
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H161
REUT264198 ncbi Ralstonia eutropha JMP1341
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30000
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PSP296591 ncbi Polaromonas sp. JS6660
PRUM264731 ncbi Prevotella ruminicola 230
PPUT76869 ncbi Pseudomonas putida GB-10
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPRO298386 ncbi Photobacterium profundum SS91
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ21
PMUL272843 ncbi Pasteurella multocida multocida Pm701
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO11
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 371
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU220664 ncbi Pseudomonas fluorescens Pf-50
PFLU216595 ncbi Pseudomonas fluorescens SBW251
PFLU205922 ncbi Pseudomonas fluorescens Pf0-11
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER208964 ncbi Pseudomonas aeruginosa PAO10
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM51
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16221
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E1
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS11
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf41
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ESP42895 Enterobacter sp.1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10431
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRAD243230 ncbi Deinococcus radiodurans R10
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124721
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CSP501479 Citreicella sp. SE450
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1011
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB151
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4001
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BVIE269482 ncbi Burkholderia vietnamiensis G40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BTHA271848 ncbi Burkholderia thailandensis E2640
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BSP36773 Burkholderia sp.1
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPSE320373 ncbi Burkholderia pseudomallei 6680
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BPSE272560 ncbi Burkholderia pseudomallei K962430
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BMAL320389 ncbi Burkholderia mallei NCTC 102470
BMAL320388 ncbi Burkholderia mallei SAVP10
BMAL243160 ncbi Burkholderia mallei ATCC 233440
BLON206672 ncbi Bifidobacterium longum NCC27051
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W1
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L1
BCER226900 ncbi Bacillus cereus ATCC 145791
BCEN331272 ncbi Burkholderia cenocepacia HI24240
BCEN331271 ncbi Burkholderia cenocepacia AU 10540
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor1
BANT260799 ncbi Bacillus anthracis Sterne1
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAMB398577 ncbi Burkholderia ambifaria MC40-60
BAMB339670 ncbi Burkholderia ambifaria AMMD0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP11
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
ASP1667 Arthrobacter sp.1
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4491
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7287   G7286   G7285   G7284   
ZMOB264203
YPSE349747 YPSIP31758_1963
YPSE273123 YPTB2103
YPES386656 YPDSF_0956
YPES377628 YPN_1646
YPES360102 YPA_1537
YPES349746 YPANGOLA_A2165
YPES214092 YPO2180
YPES187410 Y2023
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
XAUT78245
WSUC273121
WPIP955
WPIP80849
VVUL216895 VV1_3111
VVUL196600 VV1175
VPAR223926 VP2121
VFIS312309 VF0918
VCHO345073 VC0395_A1619
VCHO VC2033
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TTEN273068
TSP28240
TROS309801
TPSE340099 TETH39_0206
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TDEN326298
TDEN243275
TACI273075
SWOL335541
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296 SSU98_0275
SSUI391295 SSU05_0280
SSP94122 SHEWANA3_1788
SSP644076
SSP387093
SSP292414
SSOL273057
SSED425104 SSED_2349
SSAP342451
SRUB309807
SPYO370554 MGAS10750_SPY0041
SPYO370553 MGAS2096_SPY0041
SPYO370552 MGAS10270_SPY0042
SPYO370551 MGAS9429_SPY0040
SPYO319701 M28_SPY0039
SPYO293653 M5005_SPY0039
SPYO286636 M6_SPY0088
SPYO198466 SPYM3_0036
SPYO193567 SPS0037
SPYO186103 SPYM18_0043
SPYO160490
SPRO399741 SPRO_2704
SPNE488221 SP70585_2111
SPNE487214 SPH_2179
SPNE487213 SPT_2021
SPNE171101 SPR1837
SPNE170187 SPN20060
SPNE1313 SPJ_2031
SPEA398579 SPEA_2044
SONE211586 SO_2136
SMUT210007 SMU_148
SMEL266834
SMED366394
SMAR399550
SLOI323850 SHEW_1910
SLAC55218
SHAL458817 SHAL_2250
SHAE279808
SGOR29390 SGO_0113
SFUM335543
SERY405948
SEPI176280 SE_0506
SEPI176279 SERP0389
SDEN318161 SDEN_2000
SDEG203122
SCO
SBAL402882 SHEW185_1948
SBAL399599 SBAL195_1955
SAVE227882
SAUR93062 SACOL0135
SAUR93061 SAOUHSC_00113
SAUR426430 NWMN_0094
SAUR418127 SAHV_0147
SAUR367830 SAUSA300_0151
SAUR359787 SAURJH1_0139
SAUR359786 SAURJH9_0134
SAUR282459 SAS0123
SAUR282458 SAR0150
SAUR273036 SAB0089
SAUR196620 MW0123
SAUR158879 SA0143
SAUR158878 SAV0148
SARE391037
SALA317655 SALA_0773
SAGA211110 GBS0053
SAGA208435 SAG_0053
SAGA205921 SAK_0086
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RSOL267608 RSP0226
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316055 RPE_3692
RPAL258594
RMET266264
RMAS416276
RLEG216596
RFER338969
RFEL315456
REUT381666 H16_A2747
REUT264198 REUT_A0867
RETL347834
RDEN375451 RD1_2918
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_1509
RAKA293614
PTOR263820
PTHE370438 PTH_1584
PSYR223283
PSYR205918
PSTU379731
PSP56811
PSP312153 PNUC_1035
PSP296591
PRUM264731
PPUT76869
PPUT351746
PPUT160488
PPRO298386 PBPRA1103
PPEN278197
PNAP365044 PNAP_0160
PMUL272843 PM1453
PMOB403833
PMEN399739
PLUT319225
PLUM243265 PLU2496
PISL384616
PINT246198
PING357804 PING_3315
PHOR70601
PHAL326442
PGIN242619 PG_0687
PFUR186497
PFLU220664
PFLU216595 PFLU4212
PFLU205922 PFL_4282
PENT384676
PDIS435591
PCRY335284
PCAR338963 PCAR_2851
PATL342610
PAST100379
PARS340102
PARC259536
PAER208964
PAER208963
PAER178306
PACN267747 PPA1741
PABY272844
OTSU357244
OIHE221109
OCAR504832 OCAR_6738
OANT439375
NSP387092
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156
NEUR228410
NARO279238
MXAN246197 MXAN_0625
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988 MS2190
MSTA339860
MSP409
MSP400668
MSP266779
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLOT266835
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007
LXYL281090
LSAK314315 LSA0379
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668 LP_0329
LMES203120 LEUM_0146
LLAC272623 L13145
LLAC272622 LACR_2457
LJOH257314 LJ_1766
LINT363253
LINT267671
LINT189518
LHEL405566
LGAS324831 LGAS_1561
LDEL390333 LDB1707
LDEL321956 LBUL_1581
LCHO395495
LCAS321967 LSEI_0775
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621 LBA0461
KRAD266940
JSP375286
JSP290400 JANN_1566
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032 HNE_2500
HMUK485914
HMOD498761 HM1_2632
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HCHE349521
HBUT415426
HAUR316274
HARS204773
HACI382638
GURA351605 GURA_3537
GTHE420246
GSUL243231
GOXY290633
GMET269799
GKAU235909
GFOR411154 GFO_0958
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNOD381764
FMAG334413
FJOH376686
FALN326424
ESP42895 ENT638_2304
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAR218491 ECA2326
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRAD243230
DOLE96561
DNOD246195
DGEO319795
DETH243164
DARO159087
CVIO243365 CV_1137
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78 CAUL_1133
CSP501479
CSAL290398
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380 CPR_2540
CPEL335992
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948 CMAQ_0073
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDES477974 DAUD_2043
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO CC2402
CACE272562 CAP0035
CABO218497
BXEN266265 BXE_B0701
BWEI315730 BCERKBAB4_4218
BVIE269482
BTUR314724
BTRI382640
BTHU412694 BALH_3956
BTHU281309 BT9727_4104
BTHE226186
BTHA271848
BSUI470137
BSUI204722
BSUB
BSP36773 BCEP18194_C6645
BSP107806
BQUI283165
BPUM315750
BPSE320373
BPSE320372
BPSE272560
BPET94624
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BMAL320389
BMAL320388
BMAL243160
BLON206672 BL1575
BLIC279010 BL00199
BJAP224911
BHER314723
BHEN283166
BHAL272558 BH2237
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264 BCA_4483
BCER405917 BCE_4453
BCER315749 BCER98_0684
BCER288681 BCE33L4115
BCER226900 BC_4365
BCEN331272
BCEN331271
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BANT592021 BAA_4619
BANT568206 BAMEG_4636
BANT261594 GBAA4599
BANT260799 BAS4267
BAMY326423
BAMB398577
BAMB339670
BAFZ390236
BABO262698
AYEL322098
AURANTIMONAS
ASP76114
ASP62977 ACIAD1725
ASP62928
ASP232721
ASP1667 ARTH_3884
ASAL382245 ASA_1695
APLE434271 APJL_1029
APLE416269 APL_1011
APHA212042
APER272557
ANAE240017
AMAR234826
ALAI441768 ACL_0177
AFUL224325
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ACAU438753
ABUT367737
ABOR393595
ABAU360910
ABAC204669 ACID345_0379
AAVE397945
AAUR290340
AAEO224324


Organism features enriched in list (features available for 478 out of the 509 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 2.626e-674112
Arrangment:Singles 0.0040219223286
Endospores:No 0.0011261186211
Endospores:Yes 0.00167793553
GC_Content_Range4:40-60 0.0002462168224
GC_Content_Range4:60-100 0.0017363130145
GC_Content_Range7:30-40 0.0054370146166
GC_Content_Range7:50-60 3.348e-965107
GC_Content_Range7:60-70 0.0060279119134
Genome_Size_Range5:0-2 4.272e-7146155
Genome_Size_Range5:4-6 1.629e-7128184
Genome_Size_Range9:0-1 0.00409322727
Genome_Size_Range9:1-2 0.0000541119128
Genome_Size_Range9:4-5 0.00001126396
Habitat:Host-associated 0.0019768181206
Motility:No 0.0008201136151
Motility:Yes 0.0002376203267
Optimal_temp.:37 0.000043472106
Oxygen_Req:Aerobic 7.855e-10176185
Oxygen_Req:Facultative 0.0007756151201
Shape:Coccus 0.00065497782
Shape:Oval 0.004141715
Shape:Rod 0.0000982268347
Temp._range:Mesophilic 0.0021814378473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5480 (pyruvate fermentation to ethanol I)109530.4974
SORBDEG-PWY (sorbitol degradation II)53350.4890
PWY-6130 (glycerol degradation III)22200.4498
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45290.4341
RHAMCAT-PWY (rhamnose degradation)91420.4160



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7286   G7285   G7284   
G72870.9995460.9990980.998902
G72860.9990010.998982
G72850.998777
G7284



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PAIRWISE BLAST SCORES:

  G7287   G7286   G7285   G7284   
G72870.0f0---
G7286-0.0f0--
G7285--0.0f0-
G7284---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7284 G7285 G7286 G7287 (centered at G7286)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7287   G7286   G7285   G7284   
113/623104/623222/62363/623
ABAC204669:0:Tyes--0-
AFER243159:0:Tyes40--
AHYD196024:0:Tyes0-1252-
ALAI441768:0:Tyes--0-
AMAR329726:9:Tyes488748890-
AMET293826:0:Tyes3480234820
AORE350688:0:Tyes2031020332039
APLE416269:0:Tyes--0-
APLE434271:0:Tno--0-
ASAL382245:5:Tyes--0-
ASP1667:3:Tyes--0-
ASP62977:0:Tyes--0-
AVAR240292:3:Tyes20--
BANT260799:0:Tno--0-
BANT261594:2:Tno--0-
BANT568206:2:Tyes--0-
BANT592021:2:Tno--0-
BCER226900:1:Tyes--0-
BCER288681:0:Tno--0-
BCER315749:1:Tyes--0-
BCER405917:1:Tyes--0-
BCER572264:1:Tno--0-
BHAL272558:0:Tyes--0-
BLIC279010:0:Tyes--0-
BLON206672:0:Tyes--0-
BSP36773:0:Tyes--0-
BSP376:0:Tyes30--
BTHU281309:1:Tno--0-
BTHU412694:1:Tno--0-
BWEI315730:4:Tyes--0-
BXEN266265:1:Tyes--0-
CACE272562:0:Tyes--0-
CAULO:0:Tyes--0-
CBEI290402:0:Tyes2212180209
CBOT36826:1:Tno0527
CBOT441770:0:Tyes0527
CBOT441771:0:Tno0527
CBOT441772:1:Tno1693169801700
CBOT498213:1:Tno1657166201664
CBOT508765:1:Tyes92892900
CBOT515621:2:Tyes1873187801880
CBOT536232:0:Tno0527
CDES477974:0:Tyes--0-
CDIF272563:1:Tyes150-
CHYD246194:0:Tyes03-1
CKLU431943:1:Tyes077635
CMAQ397948:0:Tyes--0-
CNOV386415:0:Tyes7013
CPER195102:1:Tyes041699-
CPER195103:0:Tno041875-
CPER289380:3:Tyes--0-
CPHY357809:0:Tyes414440242
CSP78:2:Tyes--0-
CTET212717:0:Tyes74-076
CVIO243365:0:Tyes--0-
DDES207559:0:Tyes0395
DHAF138119:0:Tyes4622046244631
DPSY177439:2:Tyes171010
DRED349161:0:Tyes0197819731980
ECAR218491:0:Tyes--0-
ECOL199310:0:Tno3210
ECOL316407:0:Tno3210
ECOL331111:6:Tno3210
ECOL362663:0:Tno3210
ECOL364106:1:Tno3210
ECOL405955:2:Tyes3210
ECOL409438:6:Tyes3210
ECOL413997:0:Tno3210
ECOL439855:4:Tno3210
ECOL469008:0:Tno0123
ECOL481805:0:Tno0123
ECOL585034:0:Tno3210
ECOL585035:0:Tno1958210
ECOL585055:0:Tno3210
ECOL585056:2:Tno3210
ECOL585057:0:Tno3210
ECOL585397:0:Tno3210
ECOL83334:0:Tno3210
ECOLI:0:Tno3210
ECOO157:0:Tno3210
EFAE226185:3:Tyes7006960-
EFER585054:1:Tyes0123
ESP42895:1:Tyes--0-
FNUC190304:0:Tyes4294334300
GFOR411154:0:Tyes--0-
GURA351605:0:Tyes--0-
GVIO251221:0:Tyes20--
HMOD498761:0:Tyes--0-
HNEP81032:0:Tyes--0-
JSP290400:1:Tyes--0-
KPNE272620:2:Tyes3210
LACI272621:0:Tyes--0-
LBRE387344:2:Tyes143590-
LCAS321967:1:Tyes--0-
LDEL321956:0:Tyes--0-
LDEL390333:0:Tyes--0-
LGAS324831:0:Tyes--0-
LINN272626:1:Tno192340
LJOH257314:0:Tyes--0-
LLAC272622:5:Tyes--0-
LLAC272623:0:Tyes--0-
LMES203120:1:Tyes--0-
LMON169963:0:Tno192340
LMON265669:0:Tyes212540
LPLA220668:0:Tyes--0-
LREU557436:0:Tyes63016
LSAK314315:0:Tyes--0-
LSPH444177:1:Tyes140-
LWEL386043:0:Tyes192340
MAER449447:0:Tyes20144-
MAQU351348:2:Tyes0234
MGIL350054:3:Tyes0-4-
MPET420662:0:Tyes2310
MSME246196:0:Tyes014-
MSP164756:1:Tno014-
MSP164757:0:Tno014-
MSP189918:2:Tyes014-
MSUC221988:0:Tyes--0-
MVAN350058:0:Tyes4-0-
MXAN246197:0:Tyes--0-
NEUT335283:2:Tyes30--
NSP103690:6:Tyes20--
NSP35761:0:Tyes--0-
NSP35761:1:Tyes28-0
NWIN323098:0:Tyes03--
OCAR504832:0:Tyes--0-
PACN267747:0:Tyes--0-
PCAR338963:0:Tyes--0-
PFLU205922:0:Tyes--0-
PFLU216595:1:Tyes--0-
PGIN242619:0:Tyes--0-
PING357804:0:Tyes--0-
PLUM243265:0:Fyes--0-
PMAR146891:0:Tyes06--
PMAR167539:0:Tyes06--
PMAR167540:0:Tyes05--
PMAR167542:0:Tyes06--
PMAR167546:0:Tyes06--
PMAR167555:0:Tyes10--
PMAR59920:0:Tno10--
PMAR74546:0:Tyes06--
PMAR74547:0:Tyes60--
PMAR93060:0:Tyes06--
PMUL272843:1:Tyes--0-
PNAP365044:8:Tyes--0-
PPRO298386:2:Tyes--0-
PSP117:0:Tyes410-
PSP312153:0:Tyes--0-
PTHE370438:0:Tyes--0-
RALB246199:0:Tyes--0-
RDEN375451:4:Tyes--0-
REUT264198:3:Tyes--0-
REUT381666:2:Tyes--0-
RPAL316055:0:Tyes--0-
RPAL316056:0:Tyes0795
RRUB269796:1:Tyes0795
RSOL267608:0:Tyes--0-
RSP101510:1:Fyes10-0-
SAGA205921:0:Tno--0-
SAGA208435:0:Tno--0-
SAGA211110:0:Tyes--0-
SALA317655:1:Tyes--0-
SAUR158878:1:Tno--0-
SAUR158879:1:Tno--0-
SAUR196620:0:Tno--0-
SAUR273036:0:Tno--0-
SAUR282458:0:Tno--0-
SAUR282459:0:Tno--0-
SAUR359786:1:Tno--0-
SAUR359787:1:Tno--0-
SAUR367830:3:Tno--0-
SAUR418127:0:Tyes--0-
SAUR426430:0:Tno--0-
SAUR93061:0:Fno--0-
SAUR93062:1:Tno--0-
SBAL399599:3:Tyes--0-
SBAL402882:1:Tno--0-
SBOY300268:1:Tyes3210
SDEN318161:0:Tyes--0-
SDYS300267:1:Tyes1265-0-
SELO269084:0:Tyes10--
SENT209261:0:Tno0012
SENT220341:0:Tno2210
SENT295319:0:Tno0123
SENT321314:2:Tno3210
SENT454169:2:Tno3210
SEPI176279:1:Tyes--0-
SEPI176280:0:Tno--0-
SFLE198214:0:Tyes1169-0-
SFLE373384:0:Tno1166-0-
SGLO343509:3:Tyes-5220521
SGOR29390:0:Tyes--0-
SHAL458817:0:Tyes--0-
SHIGELLA:0:Tno1101-0-
SLOI323850:0:Tyes--0-
SMUT210007:0:Tyes--0-
SONE211586:1:Tyes--0-
SPEA398579:0:Tno--0-
SPNE1313:0:Tyes--0-
SPNE170187:0:Tyes--0-
SPNE171101:0:Tno--0-
SPNE487213:0:Tno--0-
SPNE487214:0:Tno--0-
SPNE488221:0:Tno--0-
SPRO399741:1:Tyes--0-
SPYO186103:0:Tno--0-
SPYO193567:0:Tno--0-
SPYO198466:0:Tno--0-
SPYO286636:0:Tno--0-
SPYO293653:0:Tno--0-
SPYO319701:0:Tyes--0-
SPYO370551:0:Tno--0-
SPYO370552:0:Tno--0-
SPYO370553:0:Tno--0-
SPYO370554:0:Tyes--0-
SSED425104:0:Tyes--0-
SSON300269:1:Tyes3210
SSP1131:0:Tyes06--
SSP1148:0:Tyes20--
SSP321327:0:Tyes107710790-
SSP321332:0:Tyes152415220-
SSP64471:0:Tyes60--
SSP84588:0:Tyes60--
SSP94122:1:Tyes--0-
SSUI391295:0:Tyes--0-
SSUI391296:0:Tyes--0-
STYP99287:1:Tyes3210
TCRU317025:0:Tyes40--
TDEN292415:0:Tyes02--
TELO197221:0:Tyes7337310-
TERY203124:0:Tyes20--
TPSE340099:0:Tyes--0-
TSP1755:0:Tyes13204
VCHO:0:Tyes--0-
VCHO345073:1:Tno--0-
VEIS391735:1:Tyes4-0-
VFIS312309:2:Tyes--0-
VPAR223926:1:Tyes--0-
VVUL196600:2:Tyes--0-
VVUL216895:1:Tno--0-
YENT393305:1:Tyes046-
YPES187410:5:Tno--0-
YPES214092:3:Tno--0-
YPES349746:2:Tno--0-
YPES360102:3:Tyes--0-
YPES377628:2:Tno--0-
YPES386656:2:Tno--0-
YPSE273123:2:Tno--0-
YPSE349747:2:Tno--0-



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