CANDIDATE ID: 780

CANDIDATE ID: 780

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9921017e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7220 (yfdH) (b2351)
   Products of gene:
     - G7220-MONOMER (CPS-53 (KpLE1) prophage; bactoprenyl glucosyl transferase)

- G7170 (arnT) (b2257)
   Products of gene:
     - G7170-MONOMER (4-amino-4-deoxy-L-arabinose (L-Ara4N) transferase)
       Reactions:
        KDO2-lipid A[periplasmic space] + 2 4-amino-4-deoxy-beta-L-arabinopyranosyl undecaprenyl phosphate[periplasmic space]  ->  L-Ara4N-modified KDO2-Lipid A[periplasmic space] + 2 di-trans,poly-cis-undecaprenyl phosphate[periplasmic space]

- G7169 (arnD) (b2256)
   Products of gene:
     - G7169-MONOMER (conserved protein)

- G7167 (arnC) (b2254)
   Products of gene:
     - G7167-MONOMER (undecaprenyl phosphate-L-Ara4FN transferase)
       Reactions:
        UDP-4-deoxy-4-formamido-beta-L-arabinopyranose + di-trans,poly-cis-undecaprenyl phosphate + H+  ->  4-deoxy-4-formamido-beta-L-arabinopyranosyl undecaprenyl phosphate + UDP
         In pathways
         PWY0-1338 (biosynthesis of  4-amino-4-deoxy-L-arabinose-modified lipid A)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 141
Effective number of orgs (counting one per cluster within 468 clusters): 83

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317583
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula13
XFAS160492 ncbi Xylella fastidiosa 9a5c3
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
XAUT78245 ncbi Xanthobacter autotrophicus Py23
TTUR377629 ncbi Teredinibacter turnerae T79013
TERY203124 ncbi Trichodesmium erythraeum IMS1013
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP84588 ncbi Synechococcus sp. WH 81023
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSP1148 ncbi Synechocystis sp. PCC 68033
SSP1131 Synechococcus sp. CC96053
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003453
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1973
SDEG203122 ncbi Saccharophagus degradans 2-403
SBOY300268 ncbi Shigella boydii Sb2274
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RMET266264 ncbi Ralstonia metallidurans CH344
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PPRO298386 ncbi Photobacterium profundum SS93
PMAR74547 ncbi Prochlorococcus marinus MIT 93133
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13753
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
NSP103690 ncbi Nostoc sp. PCC 71203
MSP400668 ncbi Marinomonas sp. MWYL13
MCAP243233 ncbi Methylococcus capsulatus Bath3
MAQU351348 ncbi Marinobacter aquaeolei VT83
MAER449447 ncbi Microcystis aeruginosa NIES-8433
LPNE400673 ncbi Legionella pneumophila Corby3
LPNE297246 ncbi Legionella pneumophila Paris3
LPNE297245 ncbi Legionella pneumophila Lens3
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 13
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1973
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5503
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)3
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)3
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
HARS204773 ncbi Herminiimonas arsenicoxydans3
GVIO251221 ncbi Gloeobacter violaceus PCC 74213
GURA351605 ncbi Geobacter uraniireducens Rf44
GSUL243231 ncbi Geobacter sulfurreducens PCA3
GMET269799 ncbi Geobacter metallireducens GS-154
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-003
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL401614 ncbi Francisella novicida U1123
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL393011 ncbi Francisella tularensis holarctica OSU183
FTUL351581 Francisella tularensis holarctica FSC2003
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DARO159087 ncbi Dechloromonas aromatica RCB3
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CPSY167879 ncbi Colwellia psychrerythraea 34H3
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHA271848 ncbi Burkholderia thailandensis E2644
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii3
BPER257313 ncbi Bordetella pertussis Tohama I3
BPAR257311 ncbi Bordetella parapertussis 128223
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BBRO257310 ncbi Bordetella bronchiseptica RB503
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
AVAR240292 ncbi Anabaena variabilis ATCC 294133
ASP62977 ncbi Acinetobacter sp. ADP13
ASP62928 ncbi Azoarcus sp. BH723
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232703
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABAU360910 ncbi Bordetella avium 197N3
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453
AAEO224324 ncbi Aquifex aeolicus VF53


Names of the homologs of the genes in the group in each of these orgs
  G7220   G7170   G7169   G7167   
YPSE349747 YPSIP31758_1729YPSIP31758_1728YPSIP31758_1724
YPSE273123 YPTB2329YPTB2326YPTB2327YPTB2329
YPES386656 YPDSF_0729YPDSF_0732YPDSF_0731YPDSF_0729
YPES377628 YPN_1875YPN_1872YPN_1873YPN_1875
YPES360102 YPA_1765YPA_1762YPA_1763YPA_1765
YPES349746 YPANGOLA_A2611YPANGOLA_A2608YPANGOLA_A2609YPANGOLA_A2611
YPES214092 YPO2421YPO2418YPO2419YPO2421
YPES187410 Y1918Y1921Y1920Y1918
YENT393305 YE2191YE2188YE2189YE2191
XORY360094 XOOORF_3195XOOORF_0699XOOORF_3195
XORY342109 XOO1710XOO0549XOO1710
XORY291331 XOO1809XOO0588XOO1809
XFAS405440 XFASM12_0149XFASM12_1926XFASM12_0149
XFAS183190 PD_0144PD_1760PD_0144
XFAS160492 XF0176XF0929XF0176
XCAM487884 XCC-B100_1291XCC-B100_3927XCC-B100_1291
XCAM316273 XCAORF_3240XCAORF_0560XCAORF_3240
XCAM314565 XC_1245XC_3816XC_1245
XCAM190485 XCC2863XCC3746XCC2863
XAXO190486 XAC3046XAC3798XAC3046
XAUT78245 XAUT_2352XAUT_4551XAUT_2352
TTUR377629 TERTU_0854TERTU_2417TERTU_0854
TERY203124 TERY_0804TERY_3477TERY_4095
STYP99287 STM0558STM2301STM2300STM2298
SSP84588 SYNW0167OR1223SYNW1881OR2884SYNW2115OR2828
SSP321332 CYB_1435CYB_1995CYB_1435
SSP321327 CYA_2466CYA_1689CYA_2466
SSP1148 SLL0501SLR1820SLL0501
SSP1131 SYNCC9605_0162SYNCC9605_0586SYNCC9605_0339
SSON300269 SSO_2315SSO_2318SSO_2317SSO_2315
SSED425104 SSED_0713SSED_0922SSED_0923SSED_0925
SPRO399741 SPRO_2155SPRO_2158SPRO_2157SPRO_2155
SPEA398579 SPEA_3629SPEA_3628SPEA_3629
SHIGELLA GTRBIS2469S2468S2466
SGLO343509 SG0299SG1841SG1842SG1844
SFLE373384 SFV_0257SFV_2327SFV_2326SFV_2324
SFLE198214 AAN41965.1AAN43850.1AAN43849.1AAN43847.1
SENT454169 SEHA_C4542SEHA_C2541SEHA_C2540SEHA_C2538
SENT321314 SCH_4084SCH_2302SCH_2301SCH_2300
SENT295319 SPA2386SPA0562SPA0563SPA0565
SENT220341 STY0606STY2531STY2530STY2528
SENT209261 T2305T0562T0563T0565
SDYS300267 SDY_2453SDY_2452SDY_2450
SDEG203122 SDE_0135SDE_1771SDE_1772
SBOY300268 SBO_2291SBO_2294SBO_2293SBO_2291
RSOL267608 RSC1321RSP1193RSC1318RSC1321
RMET266264 RMET_0656RMET_6130RMET_4593RMET_4590
REUT381666 H16_A0725H16_B1637H16_B1643H16_B1640
REUT264198 REUT_A2635REUT_A1336REUT_B3973REUT_B3976
PSYR205918 PSYR_2690PSYR_2693PSYR_2692PSYR_2690
PSP312153 PNUC_0433PNUC_0435PNUC_0430PNUC_0433
PPRO298386 PBPRB0750PBPRB0751PBPRB0750
PMAR74547 PMT1934PMT1363PMT1766
PMAR167539 PRO_0380PRO_1293PRO_1676
PLUM243265 PLU2659PLU2656PLU2657PLU2659
PFLU220664 PFL_3044PFL_3047PFL_3046PFL_3044
PFLU216595 PFLU3042PFLU3039PFLU3040PFLU3042
PFLU205922 PFL_1379PFL_2845PFL_2844PFL_2842
PAER208964 PA4819PA3556PA3555PA3553
PAER208963 PA14_63710PA14_18330PA14_18340PA14_18360
NSP103690 ALL5118ALR2076ALR3380
MSP400668 MMWYL1_2662MMWYL1_2663MMWYL1_2662
MCAP243233 MCA_2193MCA_0471MCA_2193
MAQU351348 MAQU_0288MAQU_0282MAQU_0288
MAER449447 MAE_03130MAE_39030MAE_09020
LPNE400673 LPC_2000LPC_2659LPC_2000
LPNE297246 LPP2543LPP0689LPP2543
LPNE297245 LPL2398LPL0672LPL2398
LPNE272624 LPG2478LPG0635LPG2478
LBOR355277 LBJ_2300LBJ_0796LBJ_2300
LBOR355276 LBL_0807LBL_2283LBL_0807
LBIF456481 LEPBI_I1991LEPBI_I1367LEPBI_I1991
LBIF355278 LBF_1939LBF_1314LBF_1939
KPNE272620 GKPORF_B3190GKPORF_B3187GKPORF_B3188GKPORF_B3190
HARS204773 HEAR1604HEAR2103HEAR1604
GVIO251221 GLL0700GLL3582GLL0700
GURA351605 GURA_3696GURA_3694GURA_3699GURA_3696
GSUL243231 GSU_2555GSU_2557GSU_0623
GMET269799 GMET_0885GMET_0887GMET_0882GMET_0885
FTUL458234 FTA_0658FTA_1695FTA_0658
FTUL418136 FTW_0435FTW_1615FTW_0435
FTUL401614 FTN_1403FTN_0546FTN_1403
FTUL393115 FTF1433FTF0455CFTF1433
FTUL393011 FTH_0628FTH_1555FTH_0628
FTUL351581 FTL_0625FTL_1609FTL_0625
FRANT GTRBFT.0455CGTRB
FPHI484022 FPHI_1285FPHI_1811FPHI_1285
ESP42895 ENT638_2078ENT638_2075ENT638_2076ENT638_2078
EFER585054 EFER_0628EFER_0912EFER_0913EFER_0915
ECOO157 Z3512Z3515Z3514Z3512
ECOL83334 ECS3142ECS3145ECS3144ECS3142
ECOL585397 ECED1_2720ECED1_2724ECED1_2722ECED1_2720
ECOL585057 ECIAI39_2401ECIAI39_2404ECIAI39_2403ECIAI39_2401
ECOL585056 ECUMN_0913ECUMN_2599ECUMN_2597ECUMN_2595
ECOL585055 EC55989_2500EC55989_2504EC55989_2502EC55989_2500
ECOL585035 ECS88_2403ECS88_2407ECS88_2405ECS88_2403
ECOL585034 ECIAI1_2330ECIAI1_2334ECIAI1_2332ECIAI1_2330
ECOL481805 ECOLC_1395ECOLC_1392ECOLC_1393ECOLC_1395
ECOL469008 ECBD_1405ECBD_1402ECBD_1403ECBD_1405
ECOL439855 ECSMS35_2408ECSMS35_2411ECSMS35_2410ECSMS35_2408
ECOL413997 ECB_02180ECB_02183ECB_02182ECB_02180
ECOL409438 ECSE_2513ECSE_2516ECSE_2515ECSE_2513
ECOL405955 APECO1_4307APECO1_4304APECO1_4305APECO1_4307
ECOL364106 UTI89_C2536UTI89_C2539UTI89_C2538UTI89_C2536
ECOL362663 ECP_2297ECP_2300ECP_2299ECP_2297
ECOL331111 ECE24377A_2549ECE24377A_2552ECE24377A_2551ECE24377A_2549
ECOL316407 ECK2345:JW2347:B2351ECK2250:JW2251:B2257ECK2249:JW2250:B2256ECK2247:JW2248:B2254
ECOL199310 C2796C2799C2798C2796
ECAR218491 ECA3145ECA3142ECA3143ECA3145
DARO159087 DARO_2759DARO_2758DARO_3480
CVIO243365 CV_1160CV_0752CV_0745CV_0749
CPSY167879 CPS_1863CPS_1864CPS_1863
BVIE269482 BCEP1808_6483BCEP1808_1784BCEP1808_1790BCEP1808_1787
BTHA271848 BTH_II2260BTH_I2195BTH_I2189BTH_I2192
BSP376 BRADO6108BRADO3919BRADO0168
BSP36773 BCEP18194_B2047BCEP18194_A5158BCEP18194_A5164BCEP18194_A5161
BPSE320373 BURPS668_A3075BURPS668_2235BURPS668_2241BURPS668_2238
BPSE320372 BURPS1710B_B1538BURPS1710B_A2601BURPS1710B_A2607BURPS1710B_A2604
BPSE272560 BPSS2182BPSL1474BPSL1468BPSL1471
BPET94624 BPET4604BPET0642BPET4604
BPER257313 BP0399BP0398BP0399
BPAR257311 BPP3825BPP3824BPP3825
BMAL320389 BMA10247_1153BMA10247_1150BMA10247_1156BMA10247_1153
BMAL320388 BMASAVP1_A1881BMASAVP1_A1878BMASAVP1_A1884BMASAVP1_A1881
BMAL243160 BMA_1391BMA_1388BMA_1394BMA_1391
BJAP224911 BLL3112BLR4440BLL3112
BCEN331272 BCEN2424_4024BCEN2424_1857BCEN2424_1863BCEN2424_1860
BCEN331271 BCEN_4342BCEN_6222BCEN_6216BCEN_6219
BBRO257310 BB4269BB4268BB4269
BAMB398577 BAMMC406_3938BAMMC406_1767BAMMC406_1773BAMMC406_1770
BAMB339670 BAMB_3431BAMB_1795BAMB_1801BAMB_1798
AVAR240292 AVA_2346AVA_1297AVA_3397
ASP62977 ACIAD1119ACIAD1117ACIAD1119
ASP62928 AZO0749AZO2162AZO0749
ASAL382245 ASA_1210ASA_3311ASA_3310ASA_3308
AHYD196024 AHA_1218AHA_0988AHA_0989AHA_0991
AFER243159 AFE_1309AFE_2752AFE_2800
ACAU438753 AZC_1472AZC_1580AZC_2736AZC_1472
ABAU360910 BAV2928BAV2927BAV2928
ABAC204669 ACID345_2849ACID345_4212ACID345_2286
AAEO224324 AQ_1899AQ_1220AQ_1899


Organism features enriched in list (features available for 132 out of the 141 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0001145892
Arrangment:Singles 0.002551878286
Disease:Bubonic_plague 0.000123266
Disease:Dysentery 0.000123266
Disease:Gastroenteritis 0.0022198813
Disease:Legionnaire's_disease 0.002536244
Disease:None 0.0001566358
Disease:Tularemia 0.000560755
Endospores:No 2.266e-724211
GC_Content_Range4:0-40 1.702e-1216213
GC_Content_Range4:40-60 5.406e-775224
GC_Content_Range7:30-40 3.595e-716166
GC_Content_Range7:50-60 4.302e-1050107
GC_Content_Range7:60-70 0.004428241134
Genome_Size_Range5:0-2 1.369e-109155
Genome_Size_Range5:2-4 1.509e-623197
Genome_Size_Range5:4-6 2.091e-1377184
Genome_Size_Range5:6-10 0.00002332347
Genome_Size_Range9:1-2 1.555e-79128
Genome_Size_Range9:2-3 1.031e-69120
Genome_Size_Range9:4-5 0.00005223796
Genome_Size_Range9:5-6 1.311e-74088
Genome_Size_Range9:6-8 4.894e-62138
Gram_Stain:Gram_Neg 6.504e-17115333
Motility:No 8.728e-616151
Motility:Yes 5.503e-785267
Optimal_temp.:- 0.000153176257
Oxygen_Req:Aerobic 0.005439953185
Oxygen_Req:Anaerobic 1.902e-93102
Oxygen_Req:Facultative 0.000517461201
Pathogenic_in:Animal 0.00053462666
Pathogenic_in:No 0.000013231226
Pathogenic_in:Plant 0.00024361015
Shape:Coccus 0.0002496782
Shape:Rod 2.962e-11110347
Temp._range:Mesophilic 0.0018022118473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 329
Effective number of orgs (counting one per cluster within 468 clusters): 284

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP60
VVUL196600 ncbi Vibrio vulnificus YJ0160
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106331
VFIS312309 ncbi Vibrio fischeri ES1140
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
VCHO345073 ncbi Vibrio cholerae O3950
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169610
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252591
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP94122 ncbi Shewanella sp. ANA-31
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP292414 ncbi Ruegeria sp. TM10400
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138551
SONE211586 ncbi Shewanella oneidensis MR-11
SMEL266834 ncbi Sinorhizobium meliloti 10211
SMED366394 ncbi Sinorhizobium medicae WSM4191
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SLAC55218 Ruegeria lacuscaerulensis0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SBAL402882 ncbi Shewanella baltica OS1851
SBAL399599 ncbi Shewanella baltica OS1951
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111701
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30001
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP296591 ncbi Polaromonas sp. JS6661
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PATL342610 ncbi Pseudoalteromonas atlantica T6c1
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM51
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16221
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MEXT419610 ncbi Methylobacterium extorquens PA11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CSP501479 Citreicella sp. SE450
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER405917 Bacillus cereus W0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN11
ASP232721 ncbi Acidovorax sp. JS421
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG11
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7220   G7170   G7169   G7167   
ZMOB264203
WSUC273121
WPIP955
WPIP80849
VVUL216895
VVUL196600
VPAR223926 VP2020
VFIS312309
VEIS391735
VCHO345073
VCHO
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX208
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801 TRD_1285
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TELO197221
TDEN326298
TDEN292415 TBD_1534
TDEN243275
TCRU317025
TACI273075
SWOL335541
STRO369723
STOK273063
STHE292459
SSUI391296 SSU98_1017
SSUI391295 SSU05_1004
SSP94122 SHEWANA3_4085
SSP644076
SSP387093 SUN_2146
SSP292414
SSOL273057
SSAP342451 SSP2013
SRUB309807 SRU_2407
SONE211586 SO_4690
SMEL266834 SMC02384
SMED366394 SMED_0656
SMAR399550
SLOI323850
SLAC55218
SHAL458817
SELO269084
SDEN318161
SBAL402882 SHEW185_4325
SBAL399599 SBAL195_4465
SAVE227882
SALA317655
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP101510
RSAL288705
RRUB269796 RRU_A1005
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316055 RPE_0870
RMAS416276
RFEL315456
RDEN375451
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_2005
RAKA293614
PTOR263820
PTHE370438
PSYR223283 PSPTO_5588
PSTU379731
PSP56811
PSP296591 BPRO_4007
PNAP365044
PMUL272843
PMOB403833
PMEN399739
PMAR93060 P9215_17901
PMAR74546 PMT9312_1614
PMAR167546 P9301ORF_1746
PMAR167542 P9515ORF_1773
PMAR167540 PMM1522
PISL384616
PINT246198 PIN_A1410
PING357804
PHOR70601
PHAL326442
PFUR186497
PCRY335284
PCAR338963 PCAR_1271
PATL342610 PATL_3674
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244
OCAR504832 OCAR_7264
OANT439375
NWIN323098 NWI_2567
NSP35761
NSEN222891
NPHA348780
NOCE323261
NMUL323848 NMUL_A0725
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NFAR247156
NEUR228410 NE2173
NARO279238
MXAN246197 MXAN_5585
MVAN350058
MTUB419947 MRA_1511
MTUB336982 TBFG_11531
MTHE349307
MTHE187420
MTBRV RV1500
MTBCDC MT1549
MSYN262723
MSTA339860
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2221
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407 MEMAR_0203
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_3121
MGIL350054
MGEN243273
MFLO265311
MEXT419610 MEXT_4173
MCAP340047
MBUR259564
MBOV410289 BCG_1564
MBOV233413 MB1538
MBAR269797 MBAR_A2496
MAVI243243
MART243272
MAEO419665
MACE188937 MA1184
MABS561007
LXYL281090
LSPH444177
LPLA220668 LP_2071
LINT363253
JSP290400
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HCHE349521
HBUT415426
HAUR316274
HACI382638
GTHE420246 GTNG_1359
FSP1855
FSP106370
FNUC190304 FN1262
FNOD381764
FMAG334413
FJOH376686 FJOH_0111
FALN326424
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DSP255470
DSP216389
DSHI398580
DRED349161
DRAD243230
DPSY177439
DNOD246195
DGEO319795
DETH243164
CVES412965
CTRA471473
CTRA471472
CTET212717
CSUL444179
CSP78
CSP501479
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_0299
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMET456442
CMAQ397948
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194
CHOM360107
CGLU196627
CFET360106 CFF8240_1389
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CDES477974
CCUR360105
CCON360104
CCAV227941
CBOT536232 CLM_0355
CBOT515621 CLJ_B0352
CBOT508765 CLL_A2508
CBOT498213 CLD_0453
CBOT441772 CLI_0370
CBOT441771 CLC_0356
CBOT441770 CLB_0341
CBOT36826 CBO0297
CBLO291272
CBLO203907
CBEI290402 CBEI_1724
CABO218497
BXEN266265
BWEI315730
BTUR314724
BTRI382640
BSP107806
BQUI283165
BLON206672
BHER314723
BHEN283166
BHAL272558
BGAR290434
BCIC186490
BCER405917
BBUR224326
BBAC360095
BBAC264462 BD1669
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP76114 EBA602
ASP232721 AJS_0411
ASP1667
APLE434271
APLE416269
APHA212042
APER272557
AORE350688
ANAE240017 ANA_1555
AMAR234826
ALAI441768
AFUL224325
AEHR187272
ADEH290397
ACEL351607
ABUT367737
ABOR393595
AAUR290340


Organism features enriched in list (features available for 305 out of the 329 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00203973692
Arrangment:Clusters 0.0000518117
Arrangment:Pairs 0.004320247112
Disease:Pharyngitis 0.005367888
Disease:bronchitis_and_pneumonitis 0.005367888
Endospores:No 0.0000640132211
GC_Content_Range4:0-40 0.0094738123213
GC_Content_Range4:40-60 0.0078927105224
GC_Content_Range7:0-30 9.532e-154747
GC_Content_Range7:50-60 0.000050938107
Genome_Size_Range5:0-2 1.174e-12118155
Genome_Size_Range5:4-6 3.126e-866184
Genome_Size_Range5:6-10 0.00171101547
Genome_Size_Range9:0-1 1.424e-82727
Genome_Size_Range9:1-2 5.783e-791128
Genome_Size_Range9:4-5 0.00387263996
Genome_Size_Range9:5-6 5.113e-62788
Genome_Size_Range9:6-8 0.00155201138
Habitat:Aquatic 0.00541515891
Habitat:Multiple 0.000025871178
Habitat:Specialized 0.00018294053
Optimal_temp.:30-37 0.0000254118
Optimal_temp.:37 0.002227168106
Oxygen_Req:Anaerobic 9.047e-877102
Oxygen_Req:Facultative 4.064e-1266201
Pathogenic_in:Animal 0.00110712366
Pathogenic_in:No 0.0091672130226
Salinity:Mesophilic 0.00239461213
Shape:Coccus 0.00007002782
Shape:Irregular_coccus 0.00001321717
Shape:Rod 0.0001624161347
Shape:Sphere 0.00054501719
Shape:Spiral 0.00057622734
Temp._range:Hyperthermophilic 5.058e-62223
Temp._range:Mesophilic 8.106e-8223473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1182 (trehalose degradation II (trehalase))70610.5485
PWY0-981 (taurine degradation IV)106750.5207
PWY-4041 (γ-glutamyl cycle)2791290.5080
AST-PWY (arginine degradation II (AST pathway))120780.4945
GLYCOCAT-PWY (glycogen degradation I)2461170.4812
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96670.4810
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481400.4731
GALACTITOLCAT-PWY (galactitol degradation)73560.4708
PWY-1269 (CMP-KDO biosynthesis I)3251330.4565
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181060.4557
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391350.4488
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001260.4461
PWY-5918 (heme biosynthesis I)2721190.4443
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861220.4409
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112690.4361
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149820.4341
ECASYN-PWY (enterobacterial common antigen biosynthesis)191940.4224
PWY-5386 (methylglyoxal degradation I)3051240.4218
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911200.4163
PWY-5783 (octaprenyl diphosphate biosynthesis)165850.4143
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901190.4104
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)176880.4104
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961200.4072
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981410.4067
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)195930.4042



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7170   G7169   G7167   
G72200.9987880.9986340.999865
G71700.9993440.999304
G71690.999326
G7167



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PAIRWISE BLAST SCORES:

  G7220   G7170   G7169   G7167   
G72200.0f0--3.2e-38
G7170-0.0f0--
G7169--0.0f0-
G71671.4e-35--0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7169 G7170 (centered at G7170)
G7167 (centered at G7167)
G7220 (centered at G7220)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7220   G7170   G7169   G7167   
303/623187/62380/623301/623
AAEO224324:0:Tyes4890-489
AAVE397945:0:Tyes0--0
ABAC204669:0:Tyes5651942-0
ABAU360910:0:Tyes10-1
ACAU438753:0:Tyes011112790
ACRY349163:8:Tyes0--0
AFER243159:0:Tyes01424-1472
AHYD196024:0:Tyes224013
AMAR329726:9:Tyes399--0
AMET293826:0:Tyes0--0
ANAE240017:0:Tyes0---
ASAL382245:5:Tyes0201620152013
ASP232721:2:Tyes---0
ASP62928:0:Tyes01451-0
ASP62977:0:Tyes20-2
ASP76114:2:Tyes-0--
AVAR240292:3:Tyes10510-2105
BABO262698:0:Tno02--
BAMB339670:2:Tno0---
BAMB339670:3:Tno-063
BAMB398577:2:Tno0---
BAMB398577:3:Tno-063
BAMY326423:0:Tyes405--0
BANT260799:0:Tno0--0
BANT261594:2:Tno0--0
BANT568206:2:Tyes0--0
BANT592021:2:Tno0--0
BBAC264462:0:Tyes-0--
BBRO257310:0:Tyes10-1
BCAN483179:0:Tno02--
BCEN331271:0:Tno-603
BCEN331271:1:Tno0---
BCEN331272:2:Tyes0---
BCEN331272:3:Tyes-063
BCER226900:1:Tyes0--0
BCER288681:0:Tno0--0
BCER315749:1:Tyes0--0
BCER572264:1:Tno0--0
BCLA66692:0:Tyes0--0
BFRA272559:1:Tyes-2070-0
BFRA295405:0:Tno-2264-0
BJAP224911:0:Fyes01331-0
BLIC279010:0:Tyes0--0
BMAL243160:1:Tno3063
BMAL320388:1:Tno3063
BMAL320389:1:Tyes3063
BMEL224914:0:Tno20--
BMEL359391:0:Tno02--
BOVI236:0:Tyes02--
BPAR257311:0:Tno10-1
BPER257313:0:Tyes10-1
BPET94624:0:Tyes40070-4007
BPSE272560:0:Tyes0---
BPSE272560:1:Tyes-401
BPSE320372:0:Tno0---
BPSE320372:1:Tno-063
BPSE320373:0:Tno0---
BPSE320373:1:Tno-063
BPUM315750:0:Tyes0--0
BSP36773:1:Tyes0---
BSP36773:2:Tyes-063
BSP376:0:Tyes56423550-0
BSUB:0:Tyes0--0
BSUI204722:0:Tyes02--
BSUI470137:0:Tno02--
BTHA271848:0:Tno0---
BTHA271848:1:Tno-603
BTHE226186:0:Tyes0--0
BTHU281309:1:Tno0--0
BTHU412694:1:Tno0--0
BVIE269482:5:Tyes0---
BVIE269482:7:Tyes-063
CACE272562:1:Tyes0--0
CAULO:0:Tyes0--0
CBEI290402:0:Tyes0---
CBOT36826:1:Tno0---
CBOT441770:0:Tyes0---
CBOT441771:0:Tno0---
CBOT441772:1:Tno0---
CBOT498213:1:Tno0---
CBOT508765:1:Tyes0---
CBOT515621:2:Tyes0---
CBOT536232:0:Tno0---
CBUR227377:1:Tyes0--0
CBUR360115:1:Tno0--0
CBUR434922:2:Tno0--0
CCHL340177:0:Tyes-1-0
CFET360106:0:Tyes0---
CHUT269798:0:Tyes0--307
CJAP155077:0:Tyes0--0
CKLU431943:1:Tyes0--695
CMIC31964:2:Tyes0--0
CPHY357809:0:Tyes0---
CPSY167879:0:Tyes01-0
CSAL290398:0:Tyes0--0
CTEP194439:0:Tyes-1-0
CVIO243365:0:Tyes432704
DARO159087:0:Tyes10-726
DDES207559:0:Tyes-844-0
DHAF138119:0:Tyes0--0
DOLE96561:0:Tyes0--150
DVUL882:1:Tyes-0-1790
ECAR218491:0:Tyes3013
ECOL199310:0:Tno0320
ECOL316407:0:Tno100320
ECOL331111:6:Tno0320
ECOL362663:0:Tno0320
ECOL364106:1:Tno0320
ECOL405955:2:Tyes0320
ECOL409438:6:Tyes0320
ECOL413997:0:Tno0320
ECOL439855:4:Tno0320
ECOL469008:0:Tno3013
ECOL481805:0:Tno3013
ECOL585034:0:Tno0320
ECOL585035:0:Tno0320
ECOL585055:0:Tno0320
ECOL585056:2:Tno0168816871685
ECOL585057:0:Tno0320
ECOL585397:0:Tno0320
ECOL83334:0:Tno0320
ECOLI:0:Tno98320
ECOO157:0:Tno0320
EFAE226185:3:Tyes0--0
EFER585054:1:Tyes0282283285
ESP42895:1:Tyes3013
FJOH376686:0:Tyes---0
FNUC190304:0:Tyes-0--
FPHI484022:1:Tyes0542-0
FRANT:0:Tno9160-916
FSUC59374:0:Tyes0--2422
FTUL351581:0:Tno0862-0
FTUL393011:0:Tno0765-0
FTUL393115:0:Tyes9000-900
FTUL401614:0:Tyes8500-850
FTUL418136:0:Tno0986-0
FTUL458234:0:Tno0790-0
GBET391165:0:Tyes0--0
GFOR411154:0:Tyes-156-0
GKAU235909:1:Tyes0--1620
GMET269799:1:Tyes3503
GOXY290633:5:Tyes0--0
GSUL243231:0:Tyes-192419260
GTHE420246:1:Tyes0---
GURA351605:0:Tyes2052
GVIO251221:0:Tyes02921-0
HARS204773:0:Tyes0467-0
JSP375286:0:Tyes0--0
KPNE272620:2:Tyes3013
KRAD266940:2:Fyes0--0
LACI272621:0:Tyes0--0
LBIF355278:2:Tyes6210-621
LBIF456481:2:Tno6310-631
LBOR355276:1:Tyes01330-0
LBOR355277:1:Tno13260-1326
LBRE387344:2:Tyes1187--0
LCAS321967:1:Tyes0--1526
LCHO395495:0:Tyes-1-0
LDEL321956:0:Tyes0--0
LDEL390333:0:Tyes0--0
LGAS324831:0:Tyes0--0
LHEL405566:0:Tyes0--0
LINN272626:1:Tno0--0
LINT189518:1:Tyes1477--0
LINT267671:1:Tno0--1130
LJOH257314:0:Tyes0--0
LLAC272622:5:Tyes0--0
LLAC272623:0:Tyes0--0
LMES203120:1:Tyes1240--0
LMON169963:0:Tno0--0
LMON265669:0:Tyes0--0
LPLA220668:0:Tyes0---
LPNE272624:0:Tno18400-1840
LPNE297245:1:Fno17210-1721
LPNE297246:1:Fyes18480-1848
LPNE400673:0:Tno0645-0
LREU557436:0:Tyes0--0
LSAK314315:0:Tyes0--0
LWEL386043:0:Tyes0--0
MACE188937:0:Tyes---0
MAER449447:0:Tyes03613-590
MAQU351348:2:Tyes60-6
MBAR269797:1:Tyes---0
MBOV233413:0:Tno0---
MBOV410289:0:Tno0---
MCAP243233:0:Tyes16150-1615
MEXT419610:0:Tyes-0--
MFLA265072:0:Tyes0--0
MHUN323259:0:Tyes---0
MLOT266835:2:Tyes0--0
MMAG342108:0:Tyes0--0
MMAR368407:0:Tyes---0
MMAZ192952:0:Tyes---0
MSP400668:0:Tyes01-0
MSP409:2:Tyes0--0
MSUC221988:0:Tyes0--0
MTBCDC:0:Tno0---
MTBRV:0:Tno0---
MTHE264732:0:Tyes0--0
MTUB336982:0:Tno0---
MTUB419947:0:Tyes0---
MXAN246197:0:Tyes-0--
NEUR228410:0:Tyes---0
NEUT335283:2:Tyes0--0
NHAM323097:2:Tyes10730--
NMUL323848:3:Tyes---0
NSP103690:6:Tyes30780-1318
NSP387092:0:Tyes-311-0
NWIN323098:0:Tyes0---
OCAR504832:0:Tyes0---
OIHE221109:0:Tyes0--0
PAER208963:0:Tyes3725013
PAER208964:0:Tno1287320
PARC259536:0:Tyes0--0
PATL342610:0:Tyes-0--
PCAR338963:0:Tyes---0
PDIS435591:0:Tyes1466--0
PENT384676:0:Tyes-0-1897
PFLU205922:0:Tyes0148514841482
PFLU216595:1:Tyes3013
PFLU220664:0:Tyes0320
PGIN242619:0:Tyes0--0
PINT246198:1:Tyes---0
PLUM243265:0:Fyes3013
PLUT319225:0:Tyes-1-0
PMAR146891:0:Tyes-0-355
PMAR167539:0:Tyes0925-1317
PMAR167540:0:Tyes---0
PMAR167542:0:Tyes---0
PMAR167546:0:Tyes---0
PMAR167555:0:Tyes-0-318
PMAR59920:0:Tno-0-298
PMAR74546:0:Tyes---0
PMAR74547:0:Tyes5910-421
PMAR93060:0:Tyes---0
PPEN278197:0:Tyes0--0
PPRO298386:1:Tyes01-0
PPUT160488:0:Tno10--
PPUT351746:0:Tyes10--
PPUT76869:0:Tno02847--
PRUM264731:0:Tyes0--0
PSP117:0:Tyes-3802-0
PSP296591:2:Tyes0---
PSP312153:0:Tyes3503
PSYR205918:0:Tyes0320
PSYR223283:2:Tyes-0--
RALB246199:0:Tyes0---
RCAS383372:0:Tyes36--0
RETL347834:5:Tyes0--0
REUT264198:2:Tyes--03
REUT264198:3:Tyes13190--
REUT381666:1:Tyes-063
REUT381666:2:Tyes0---
RFER338969:1:Tyes20--
RLEG216596:6:Tyes0--0
RMET266264:0:Tyes-0--
RMET266264:1:Tyes--30
RMET266264:2:Tyes0---
RPAL258594:0:Tyes01408--
RPAL316055:0:Tyes0---
RPAL316056:0:Tyes545--0
RPAL316057:0:Tyes15810--
RPAL316058:0:Tyes01085--
RRUB269796:1:Tyes---0
RSOL267608:0:Tyes-0--
RSOL267608:1:Tyes3-03
RSP357808:0:Tyes31--0
SAGA205921:0:Tno0--0
SAGA208435:0:Tno0--0
SAGA211110:0:Tyes0--0
SARE391037:0:Tyes0--0
SAUR158878:1:Tno0--0
SAUR158879:1:Tno0--0
SAUR196620:0:Tno0--0
SAUR273036:0:Tno0--0
SAUR282458:0:Tno0--0
SAUR282459:0:Tno0--0
SAUR359786:1:Tno0--0
SAUR359787:1:Tno0--0
SAUR367830:3:Tno0--0
SAUR418127:0:Tyes0--0
SAUR426430:0:Tno0--0
SAUR93061:0:Fno0--0
SAUR93062:1:Tno0--0
SBAL399599:3:Tyes-0--
SBAL402882:1:Tno-0--
SBOY300268:1:Tyes0320
SCO:2:Fyes1715--0
SDEG203122:0:Tyes01659-1660
SDYS300267:1:Tyes-320
SENT209261:0:Tno1651013
SENT220341:0:Tno0172217211719
SENT295319:0:Tno1748013
SENT321314:2:Tno1823210
SENT454169:2:Tno1909320
SEPI176279:1:Tyes0--0
SEPI176280:0:Tno0--0
SERY405948:0:Tyes0--0
SFLE198214:0:Tyes0193019291927
SFLE373384:0:Tno0195119501948
SFUM335543:0:Tyes-0-781
SGLO343509:3:Tyes0158315841586
SGOR29390:0:Tyes0--0
SHAE279808:0:Tyes0--0
SHIGELLA:0:Tno0186918681866
SMED366394:3:Tyes---0
SMEL266834:2:Tyes---0
SMUT210007:0:Tyes0--0
SONE211586:1:Tyes-0--
SPEA398579:0:Tno10-1
SPNE1313:0:Tyes0--0
SPNE170187:0:Tyes0--0
SPNE171101:0:Tno0--0
SPNE487213:0:Tno0--0
SPNE487214:0:Tno0--0
SPNE488221:0:Tno0--0
SPRO399741:1:Tyes0320
SPYO160490:0:Tno0--0
SPYO186103:0:Tno0--0
SPYO193567:0:Tno0--0
SPYO198466:0:Tno0--0
SPYO286636:0:Tno0--0
SPYO293653:0:Tno0--0
SPYO319701:0:Tyes0--0
SPYO370551:0:Tno0--0
SPYO370552:0:Tno0--0
SPYO370553:0:Tno0--0
SPYO370554:0:Tyes0--0
SRUB309807:1:Tyes---0
SSAP342451:2:Tyes0---
SSED425104:0:Tyes0213214216
SSON300269:1:Tyes0320
SSP1131:0:Tyes0438-182
SSP1148:0:Tyes17100-1710
SSP321327:0:Tyes7470-747
SSP321332:0:Tyes0542-0
SSP387093:0:Tyes0---
SSP64471:0:Tyes-1673-0
SSP84588:0:Tyes01739-1987
SSP94122:1:Tyes-0--
SSUI391295:0:Tyes0---
SSUI391296:0:Tyes0---
STHE264199:0:Tyes0--0
STHE299768:0:Tno0--0
STHE322159:2:Tyes0--0
STYP99287:1:Tyes0172617251723
TDEN292415:0:Tyes-0--
TERY203124:0:Tyes02346-2882
TROS309801:1:Tyes---0
TTUR377629:0:Tyes01383-0
UMET351160:0:Tyes---0
VPAR223926:1:Tyes-0--
XAUT78245:1:Tyes02209-0
XAXO190486:0:Tyes0752-0
XCAM190485:0:Tyes0883-0
XCAM314565:0:Tno02586-0
XCAM316273:0:Tno26330-2633
XCAM487884:0:Tno02675-0
XFAS160492:2:Tno0763-0
XFAS183190:1:Tyes01586-0
XFAS405440:0:Tno01644-0
XORY291331:0:Tno12360-1236
XORY342109:0:Tyes11750-1175
XORY360094:0:Tno48590-4859
YENT393305:1:Tyes3013
YPES187410:5:Tno0320
YPES214092:3:Tno3013
YPES349746:2:Tno3013
YPES360102:3:Tyes3013
YPES377628:2:Tno3013
YPES386656:2:Tno0320
YPSE273123:2:Tno3013
YPSE349747:2:Tno-540



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