CANDIDATE ID: 793

CANDIDATE ID: 793

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9906600e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6531 (pgaA) (b1024)
   Products of gene:
     - G6531-MONOMER (partially N-deacetylated poly-β-1,6-N-acetyl-D-glucosamine outer membrane porin)
       Reactions:
        partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine[periplasmic space]  ->  partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine[extracellular space]

- G6530 (pgaB) (b1023)
   Products of gene:
     - G6530-MONOMER (poly-β-1,6-N-acetyl-D-glucosamine N-deacetylase)
       Reactions:
        poly-beta-1,6-N-acetyl-D-glucosamine + H2O  =  partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine + acetate + H+

- G6529 (pgaC) (b1022)
   Products of gene:
     - G6529-MONOMER (UDP-N-acetyl-D-glucosamine β-1,6-N-acetyl-D-glucosaminyl transferase)
       Reactions:
        UDP-alpha-N-acetyl-D-glucosamine + UDP-[N-acetyl-D-glucosamine]n  =  poly-beta-1,6-N-acetyl-D-glucosamine + UDP

- G6215 (yaiP) (b0363)
   Products of gene:
     - G6215-MONOMER (predicted glucosyltransferase)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 85
Effective number of orgs (counting one per cluster within 468 clusters): 51

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12513
STHE292459 ncbi Symbiobacterium thermophilum IAM 148633
SONE211586 ncbi Shewanella oneidensis MR-13
SFLE373384 ncbi Shigella flexneri 5 str. 84013
SEPI176279 ncbi Staphylococcus epidermidis RP62A3
SCO ncbi Streptomyces coelicolor A3(2)3
SBAL399599 ncbi Shewanella baltica OS1953
SAVE227882 ncbi Streptomyces avermitilis MA-46803
SACI56780 ncbi Syntrophus aciditrophicus SB3
RSOL267608 ncbi Ralstonia solanacearum GMI10004
PPRO298386 ncbi Photobacterium profundum SS94
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E3
MSP189918 ncbi Mycobacterium sp. KMS3
MSP164757 ncbi Mycobacterium sp. JLS3
MSP164756 ncbi Mycobacterium sp. MCS3
MAER449447 ncbi Microcystis aeruginosa NIES-8433
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
HCHE349521 ncbi Hahella chejuensis KCTC 23963
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237793
GURA351605 ncbi Geobacter uraniireducens Rf43
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585057 ncbi Escherichia coli IAI394
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S883
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DRED349161 ncbi Desulfotomaculum reducens MI-13
DPSY177439 ncbi Desulfotalea psychrophila LSv544
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CTET212717 ncbi Clostridium tetani E883
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6573
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBOT498213 ncbi Clostridium botulinum B1 str. Okra3
CBOT441772 ncbi Clostridium botulinum F str. Langeland3
CBOT441771 ncbi Clostridium botulinum A str. Hall3
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193973
CBOT36826 Clostridium botulinum A3
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CACE272562 ncbi Clostridium acetobutylicum ATCC 8243
BVIE269482 ncbi Burkholderia vietnamiensis G43
BSP36773 Burkholderia sp.4
BPSE320372 ncbi Burkholderia pseudomallei 1710b3
BPSE272560 ncbi Burkholderia pseudomallei K962433
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BCER288681 ncbi Bacillus cereus E33L3
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAMB398577 ncbi Burkholderia ambifaria MC40-63
BAMB339670 ncbi Burkholderia ambifaria AMMD3
ASP62977 ncbi Acinetobacter sp. ADP13
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL033
APLE416269 ncbi Actinobacillus pleuropneumoniae L203
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3


Names of the homologs of the genes in the group in each of these orgs
  G6531   G6530   G6529   G6215   
YPSE349747 YPSIP31758_2131YPSIP31758_2130YPSIP31758_2129YPSIP31758_2129
YPSE273123 YPTB1949YPTB1950YPTB1951YPTB1951
YPES386656 YPDSF_1171YPDSF_1170YPDSF_1169YPDSF_1169
YPES360102 YPA_1334YPA_1335YPA_1336YPA_1336
YPES349746 YPANGOLA_A2141YPANGOLA_A2142YPANGOLA_A2143YPANGOLA_A2143
YPES214092 YPO1951YPO1952YPO1953YPO1953
YPES187410 Y2359Y2358Y2357Y2357
YENT393305 YE2484YE2483YE2482YE2482
XORY360094 XOOORF_0981XOOORF_0980XOOORF_0979XOOORF_0979
XORY342109 XOO3691XOO3692XOO3693XOO3693
XORY291331 XOO3911XOO3912XOO3913XOO3913
XAXO190486 XAC1813XAC1812XAC1811XAC1811
TDEN326298 TMDEN_0751TMDEN_0752TMDEN_0752
STHE292459 STH2350STH2817STH1362
SONE211586 SO_4616SO_4179SO_4179
SFLE373384 SFV_0120SFV_1033SFV_1033
SEPI176279 SERP2295SERP2293SERP2293
SCO SCO5053SCO2962SCO4554
SBAL399599 SBAL195_4321SBAL195_0448SBAL195_0448
SAVE227882 SAV6571SAV5115SAV4829
SACI56780 SYN_00858SYN_00856SYN_01103
RSOL267608 RSP0286RSP0287RSP0288RSP0288
PPRO298386 PBPRB0458PBPRB0457PBPRB0456PBPRB0456
PFLU220664 PFL_0161PFL_0162PFL_0163PFL_0163
PFLU216595 PFLU0143PFLU0144PFLU0145PFLU0145
PFLU205922 PFL_0177PFL_0178PFL_0179PFL_0179
PCAR338963 PCAR_2792PCAR_2791PCAR_2790PCAR_1758
MTHE264732 MOTH_1858MOTH_2154MOTH_2154
MSUC221988 MS1113MS1112MS1112
MSP189918 MKMS_4730MKMS_3416MKMS_3416
MSP164757 MJLS_5025MJLS_3365MJLS_3365
MSP164756 MMCS_4642MMCS_3354MMCS_3354
MAER449447 MAE_49260MAE_58600MAE_09020
KPNE272620 GKPORF_B3875GKPORF_B3874GKPORF_B3873GKPORF_B3873
JSP375286 MMA_2649MMA_2648MMA_2647MMA_2647
HCHE349521 HCH_05590HCH_05591HCH_05591
HAUR316274 HAUR_1595HAUR_2689HAUR_1456
GURA351605 GURA_0976GURA_1567GURA_4279
EFER585054 EFER_1904EFER_1905EFER_1906EFER_1906
ECOO157 YCDSYCDRYCDQYCDQ
ECOL83334 ECS1270ECS1269ECS1268ECS1268
ECOL585057 ECIAI39_2132ECIAI39_2133ECIAI39_2134ECIAI39_0318
ECOL585055 EC55989_1135EC55989_1134EC55989_1133EC55989_0370
ECOL585035 ECS88_1039ECS88_1038ECS88_0360
ECOL481805 ECOLC_2572ECOLC_2573ECOLC_2574ECOLC_3265
ECOL469008 ECBD_2570ECBD_2571ECBD_2572ECBD_2572
ECOL413997 ECB_01026ECB_01025ECB_01024ECB_01024
ECOL409438 ECSE_1089ECSE_1088ECSE_1087ECSE_0385
ECOL405955 APECO1_115APECO1_114APECO1_113APECO1_1641
ECOL364106 UTI89_C1087UTI89_C1086UTI89_C1085UTI89_C2240
ECOL362663 ECP_1023ECP_1022ECP_1021ECP_1999
ECOL331111 ECE24377A_1144ECE24377A_1143ECE24377A_1142ECE24377A_0385
ECOL316407 ECK1014:JW1010:B1024ECK1013:JW5142:B1023ECK1012:JW1007:B1022ECK0360:JW0355:B0363
ECOL199310 C1163C1162C1161C0469
ECAR218491 ECA4454ECA4453ECA4452ECA4452
DRED349161 DRED_3052DRED_1593DRED_1593
DPSY177439 DP1636DP1635DP1637DP2580
CVIO243365 CV_2943CV_4277CV_2941CV_2941
CTET212717 CTC_01186CTC_00838CTC_00838
CBOT536232 CLM_0112CLM_1457CLM_1457
CBOT515621 CLJ_B0102CLJ_B1345CLJ_B1345
CBOT508765 CLL_A0355CLL_A1715CLL_A1715
CBOT498213 CLD_0718CLD_3270CLD_3270
CBOT441772 CLI_0125CLI_1383CLI_1383
CBOT441771 CLC_0116CLC_1336CLC_1336
CBOT441770 CLB_0104CLB_1326CLB_1326
CBOT36826 CBO0068CBO1297CBO1297
CBEI290402 CBEI_2350CBEI_4236CBEI_4236
CACE272562 CAC0436CAC2589CAC2173
BVIE269482 BCEP1808_4663BCEP1808_4662BCEP1808_4662
BSP36773 BCEP18194_B1940BCEP18194_B1941BCEP18194_B1942BCEP18194_B1942
BPSE320372 BURPS1710B_B1701BURPS1710B_B1334BURPS1710B_A2604
BPSE272560 BPSS2302BPSS2015BPSL1471
BPER257313 BP1944BP1943BP1942BP1942
BPAR257311 BPP2318BPP2317BPP2316BPP2316
BCER288681 BCE33L4976BCE33L3135BCE33L3135
BCEN331272 BCEN2424_4104BCEN2424_4103BCEN2424_4102BCEN2424_4102
BCEN331271 BCEN_4262BCEN_4263BCEN_4264BCEN_4264
BBRO257310 BB1769BB1768BB1767BB1767
BAMB398577 BAMMC406_3997BAMMC406_3996BAMMC406_3996
BAMB339670 BAMB_3514BAMB_3513BAMB_3513
ASP62977 ACIAD1029ACIAD1030ACIAD1030
APLE434271 APJL_1969APJL_1970APJL_1970
APLE416269 APL_1922APL_1923APL_1923
ADEH290397 ADEH_2926ADEH_2925ADEH_2925


Organism features enriched in list (features available for 82 out of the 85 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000244628112
Disease:Botulism 0.000049555
Disease:Bubonic_plague 0.000257256
Disease:Gastroenteritis 0.0041834613
Disease:Rice_bacterial_blight_disease 0.002695433
Endospores:No 0.000228616211
Endospores:Yes 0.00228021553
GC_Content_Range4:0-40 6.822e-613213
GC_Content_Range4:40-60 0.002019243224
GC_Content_Range7:30-40 8.905e-94166
GC_Content_Range7:50-60 0.003525724107
Genome_Size_Range5:2-4 0.001060216197
Genome_Size_Range5:4-6 2.051e-950184
Genome_Size_Range5:6-10 0.00017491647
Genome_Size_Range9:2-3 0.00108047120
Genome_Size_Range9:4-5 0.00003552796
Genome_Size_Range9:5-6 0.00050732388
Genome_Size_Range9:6-8 0.00070591338
Gram_Stain:Gram_Neg 0.004679857333
Habitat:Multiple 0.000012542178
Habitat:Specialized 0.0097110253
Motility:No 0.000678310151
Motility:Yes 0.001170750267
Optimal_temp.:28-30 0.008317947
Oxygen_Req:Facultative 0.009501437201
Pathogenic_in:No 0.000613819226
Pathogenic_in:Rice 0.002695433
Pathogenic_in:Rodent 0.008317947
Shape:Coccus 0.0001766282
Shape:Rod 4.557e-870347
Temp._range:Mesophilic 0.001166076473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 396
Effective number of orgs (counting one per cluster within 468 clusters): 318

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPES377628 ncbi Yersinia pestis Nepal5161
XFAS405440 ncbi Xylella fastidiosa M121
XFAS183190 ncbi Xylella fastidiosa Temecula11
XFAS160492 ncbi Xylella fastidiosa 9a5c1
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP60
VVUL196600 ncbi Vibrio vulnificus YJ0160
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
VCHO345073 ncbi Vibrio cholerae O3950
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169610
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.1
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-10
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TFUS269800 ncbi Thermobifida fusca YX0
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT21
STRO369723 ncbi Salinispora tropica CNB-4400
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SMUT210007 ncbi Streptococcus mutans UA1591
SMEL266834 ncbi Sinorhizobium meliloti 10211
SMED366394 ncbi Sinorhizobium medicae WSM4191
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SLAC55218 Ruegeria lacuscaerulensis0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4761
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91501
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT181
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty21
SELO269084 ncbi Synechococcus elongatus PCC 63011
SDEN318161 ncbi Shewanella denitrificans OS2170
SBAL402882 ncbi Shewanella baltica OS1851
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-31
RPAL316058 ncbi Rhodopseudomonas palustris HaA21
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H160
REUT264198 ncbi Ralstonia eutropha JMP1341
RETL347834 ncbi Rhizobium etli CFN 421
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97901
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30001
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a0
PSTU379731 ncbi Pseudomonas stutzeri A15011
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PRUM264731 ncbi Prevotella ruminicola 231
PPUT76869 ncbi Pseudomonas putida GB-11
PPUT351746 ncbi Pseudomonas putida F11
PPUT160488 ncbi Pseudomonas putida KT24401
PMUL272843 ncbi Pasteurella multocida multocida Pm701
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO11
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PING357804 ncbi Psychromonas ingrahamii 371
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1251
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PATL342610 ncbi Pseudoalteromonas atlantica T6c1
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712020
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM51
OANT439375 ncbi Ochrobactrum anthropi ATCC 491881
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534421
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X141
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C911
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
MXAN246197 ncbi Myxococcus xanthus DK 16221
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP409 Methylobacterium sp.1
MSP400668 ncbi Marinomonas sp. MWYL11
MSP266779 ncbi Chelativorans sp. BNC10
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT1
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT81
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3341
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP1
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans1
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-151
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-001
FTUL418136 ncbi Francisella tularensis tularensis WY96-34181
FTUL393115 ncbi Francisella tularensis tularensis FSC1981
FTUL393011 ncbi Francisella tularensis holarctica OSU181
FTUL351581 Francisella tularensis holarctica FSC2001
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S41
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRAD243230 ncbi Deinococcus radiodurans R10
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1951
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
DARO159087 ncbi Dechloromonas aromatica RCB1
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSP376 Bradyrhizobium sp.1
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BCLA66692 ncbi Bacillus clausii KSM-K161
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER405917 Bacillus cereus W1
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP232721 ncbi Acidovorax sp. JS420
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AHYD196024 Aeromonas hydrophila dhakensis0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232701
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACAU438753 ncbi Azorhizobium caulinodans ORS 5711
ABOR393595 ncbi Alcanivorax borkumensis SK21
ABAU360910 ncbi Bordetella avium 197N1
AAVE397945 ncbi Acidovorax citrulli AAC00-10


Names of the homologs of the genes in the group in each of these orgs
  G6531   G6530   G6529   G6215   
YPES377628 YPN_0685
XFAS405440 XFASM12_0811
XFAS183190 PD_0687
XFAS160492 XF1469
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAUT78245 XAUT_4423
WSUC273121 WS1905
WPIP955
WPIP80849
VVUL216895
VVUL196600
VEIS391735
VCHO345073
VCHO
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TSP28240
TSP1755 TETH514_1549
TPSE340099 TETH39_1112
TPET390874
TPAL243276
TMAR243274
TLET416591
TFUS269800
TELO197221 TLR1854
TDEN292415
TDEN243275
TCRU317025 TCR_0020
TACI273075
STYP99287 STM0303
STRO369723
STHE299768 STR1485
STHE264199 STU1485
SSUI391296
SSUI391295
SSP94122 SHEWANA3_4000
SSP84588 SYNW0060OR1153
SSP64471 GSYN0066
SSP387093
SSP1148 SLL1377
SSP1131 SYNCC9605_0060
SSOL273057 SSO2389
SSAP342451
SPYO370554
SPYO370553 MGAS2096_SPY1882
SPYO370552
SPYO370551 MGAS9429_SPY1862
SPYO319701
SPYO293653 M5005_SPY1851
SPYO286636 M6_SPY1869
SPYO198466 SPYM3_1851
SPYO193567 SPS1847
SPYO186103 SPYM18_2236
SPYO160490 SPY2200
SPNE488221 SP70585_1815
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579 SPEA_4008
SMUT210007 SMU_1434C
SMEL266834 SMA0866
SMED366394 SMED_6186
SMAR399550
SLOI323850 SHEW_0108
SLAC55218
SHAL458817 SHAL_0249
SHAE279808
SGOR29390
SGLO343509 SG0290
SERY405948
SEPI176280
SENT454169 SEHA_C0204
SENT295319 SPA2460
SENT220341 STY0338
SENT209261 T2556
SELO269084 SYC0466_C
SDEN318161
SBAL402882 SHEW185_4190
SARE391037
SALA317655
SAGA208435 SAG_1548
RXYL266117 RXYL_1238
RTYP257363
RSPH349102 RSPH17025_4173
RSPH349101
RSPH272943
RSP101510
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200 SPO_1540
RPAL316058 RPB_2860
RPAL316057 RPD_2612
RPAL316056 RPC_2600
RPAL316055 RPE_2780
RPAL258594 RPA2655
RMET266264 RMET_0656
RMAS416276
RFER338969
RFEL315456
REUT381666
REUT264198 REUT_B4949
RETL347834 RHE_CH03197
RDEN375451
RCON272944
RCAS383372 RCAS_1328
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_3698
RAKA293614
PTOR263820 PTO0968
PSYR223283 PSPTO_1330
PSYR205918
PSTU379731 PST_0048
PSP56811
PSP312153
PSP296591
PRUM264731 GFRORF1395
PPUT76869 PPUTGB1_1135
PPUT351746 PPUT_4198
PPUT160488 PP_1526
PMUL272843 PM1140
PMOB403833
PMEN399739
PMAR93060 P9215_19321
PMAR74547 PMT0058
PMAR74546 PMT9312_1751
PMAR59920
PMAR167555
PMAR167540 PMM1659
PMAR167539 PRO_1819
PLUM243265 PLU3015
PISL384616
PINT246198 PIN_A1860
PING357804 PING_0455
PHAL326442 PSHAA2863
PDIS435591 BDI_1297
PCRY335284
PATL342610 PATL_4235
PAST100379
PARS340102
PARC259536
PAER178306 PAE1555
PACN267747
OTSU357244
OIHE221109
OCAR504832 OCAR_6797
OANT439375 OANT_0414
NWIN323098 NWI_1789
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833 NMCC_1138
NMEN272831
NMEN122587
NMEN122586
NHAM323097 NHAM_1779
NGON242231
NFAR247156
NEUT335283 NEUT_1975
NEUR228410 NE1334
MXAN246197 MXAN_5740
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860 MSP_0218
MSP409 M446_3373
MSP400668 MMWYL1_3791
MSP266779
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAR444158
MMAR426368 MMARC7_1612
MMAR402880 MMARC5_1627
MMAR368407
MMAR267377 MMP0590
MLEP272631
MLAB410358 MLAB_0663
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_2117
MGIL350054
MGEN243273
MFLO265311
MFLA265072 MFLA_1372
MCAP340047
MCAP243233
MBUR259564 MBUR_2237
MBOV410289
MBOV233413
MAVI243243
MART243272
MAQU351348 MAQU_1077
MAEO419665
MABS561007
LXYL281090 LXX23220
LPNE400673 LPC_2000
LPNE297246 LPP2543
LPNE297245 LPL2398
LPNE272624 LPG2478
LMES203120
LINT363253 LI0471
LHEL405566
LGAS324831 LGAS_0081
LDEL390333
LDEL321956
LCHO395495
LCAS321967 LSEI_1089
JSP290400
ILOI283942 IL0251
IHOS453591
HWAL362976
HSP64091
HSOM228400 HSM_0976
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914 HMUK_1657
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279 HH_0204
HHAL349124
HDUC233412 HD_0466
HBUT415426
HARS204773 HEAR2596
HACI382638
GTHE420246 GTNG_3086
GOXY290633
GMET269799 GMET_0897
GKAU235909 GK1041
GBET391165
FTUL458234 FTA_1511
FTUL418136 FTW_0595
FTUL393115 FTF0798
FTUL393011 FTH_1386
FTUL351581 FTL_1423
FSUC59374 FSU0958
FSP1855
FSP106370 FRANCCI3_1587
FRANT FT.0799
FPHI484022 FPHI_1082
FNUC190304 FN0393
FNOD381764 FNOD_0228
FMAG334413
FJOH376686 FJOH_4840
FALN326424 FRAAL0797
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRAD243230
DOLE96561 DOLE_0534
DNOD246195
DHAF138119 DSY2456
DGEO319795
DETH243164 DET_1141
DDES207559 DDE_1658
DARO159087 DARO_0156
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSAL290398
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380 CPR_0367
CPER195103 CPF_0372
CPER195102 CPE0384
CPEL335992
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKLU431943 CKL_3772
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHUT269798 CHU_0603
CHOM360107 CHAB381_0659
CGLU196627
CFET360106 CFF8240_1782
CFEL264202
CEFF196164
CDIP257309
CDES477974 DAUD_2105
CCUR360105 CCV52592_1233
CCON360104 CCC13826_0340
CCHL340177 CAG_0340
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BXEN266265
BWEI315730 BCERKBAB4_5030
BTUR314724
BTRI382640
BTHE226186 BT_1353
BSUI470137
BSUI204722
BSP376 BRADO3754
BSP107806
BQUI283165
BPET94624
BOVI236
BMEL359391
BMEL224914
BLON206672
BLIC279010 BL00180
BJAP224911 BLR4614
BHER314723
BHEN283166
BGAR290434
BFRA295405 BF4042
BCLA66692 ABC2648
BCIC186490
BCER405917 BCE_5356
BCER315749 BCER98_3771
BCAN483179
BBUR224326
BBAC360095
BBAC264462 BD2270
BAPH372461
BAPH198804
BAFZ390236
BABO262698
AYEL322098
AURANTIMONAS
ASP76114
ASP232721
ASP1667
APHA212042
APER272557
AORE350688 CLOS_0614
ANAE240017
AMAR234826
ALAI441768
AHYD196024
AFUL224325
AFER243159 AFE_0927
AEHR187272
ACRY349163 ACRY_2146
ACAU438753 AZC_3816
ABOR393595 ABO_2295
ABAU360910 BAV2234
AAVE397945


Organism features enriched in list (features available for 367 out of the 396 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0001271317
Arrangment:Pairs 2.733e-747112
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0003003111
Disease:Wide_range_of_infections 0.00581401111
Endospores:Yes 0.00001811953
Genome_Size_Range5:0-2 6.543e-17138155
Genome_Size_Range5:4-6 1.045e-1179184
Genome_Size_Range5:6-10 0.00154472047
Genome_Size_Range9:0-1 2.587e-62727
Genome_Size_Range9:1-2 2.161e-11111128
Genome_Size_Range9:4-5 0.00008384496
Genome_Size_Range9:5-6 9.667e-73588
Genome_Size_Range9:6-8 0.00137591538
Gram_Stain:Gram_Pos 0.002547081150
Habitat:Host-associated 0.0000838150206
Habitat:Multiple 3.896e-688178
Motility:Yes 0.0003174149267
Optimal_temp.:30-37 0.0000545318
Oxygen_Req:Facultative 0.0001552107201
Shape:Rod 0.0006542201347
Shape:Sphere 0.00825761719



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-981 (taurine degradation IV)106480.4174



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6530   G6529   G6215   
G65310.9990230.9989620.998667
G65300.9991270.998899
G65290.999718
G6215



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PAIRWISE BLAST SCORES:

  G6531   G6530   G6529   G6215   
G65310.0f0---
G6530-0.0f0--
G6529--0.0f0-
G6215--4.2e-100.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6529 G6530 G6531 (centered at G6530)
G6215 (centered at G6215)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6531   G6530   G6529   G6215   
45/623172/623278/623246/623
AAEO224324:0:Tyes--0347
AAUR290340:2:Tyes--00
ABAC204669:0:Tyes--00
ABAU360910:0:Tyes-0--
ABOR393595:0:Tyes---0
ABUT367737:0:Tyes--0358
ACAU438753:0:Tyes--0-
ACEL351607:0:Tyes--00
ACRY349163:8:Tyes--0-
ADEH290397:0:Tyes-100
AFER243159:0:Tyes-0--
AMAR329726:9:Tyes-02479-
AMET293826:0:Tyes--5730
AORE350688:0:Tyes--0-
APLE416269:0:Tyes-011
APLE434271:0:Tno-011
ASAL382245:5:Tyes--00
ASP62928:0:Tyes-0-56
ASP62977:0:Tyes-011
AVAR240292:3:Tyes--13730
BAMB339670:2:Tno-100
BAMB398577:2:Tno-100
BAMY326423:0:Tyes--02706
BANT260799:0:Tno--00
BANT261594:2:Tno--00
BANT568206:2:Tyes--00
BANT592021:2:Tno--00
BBAC264462:0:Tyes---0
BBRO257310:0:Tyes2100
BCEN331271:1:Tno0122
BCEN331272:2:Tyes2100
BCER226900:1:Tyes--030
BCER288681:0:Tno-185200
BCER315749:1:Tyes--0-
BCER405917:1:Tyes--0-
BCER572264:1:Tno--00
BCLA66692:0:Tyes--0-
BFRA272559:1:Tyes--03540
BFRA295405:0:Tno---0
BHAL272558:0:Tyes--9050
BJAP224911:0:Fyes--0-
BLIC279010:0:Tyes--0-
BMAL243160:0:Tno-0--
BMAL243160:1:Tno---0
BMAL320388:0:Tno-0--
BMAL320388:1:Tno---0
BMAL320389:0:Tyes-0--
BMAL320389:1:Tyes---0
BPAR257311:0:Tno2100
BPER257313:0:Tyes2100
BPSE272560:0:Tyes-2900-
BPSE272560:1:Tyes---0
BPSE320372:0:Tno-3660-
BPSE320372:1:Tno---0
BPSE320373:0:Tno--0-
BPSE320373:1:Tno---0
BPUM315750:0:Tyes--02848
BSP36773:1:Tyes0122
BSP376:0:Tyes--0-
BSUB:0:Tyes--00
BTHA271848:0:Tno--0-
BTHA271848:1:Tno---0
BTHE226186:0:Tyes---0
BTHU281309:1:Tno--00
BTHU412694:1:Tno--00
BVIE269482:6:Tyes-100
BWEI315730:4:Tyes--0-
CACE272562:1:Tyes-021351723
CBEI290402:0:Tyes-018381838
CBOT36826:1:Tno-012071207
CBOT441770:0:Tyes-011881188
CBOT441771:0:Tno-011881188
CBOT441772:1:Tno-012191219
CBOT498213:1:Tno-012281228
CBOT508765:1:Tyes-013151315
CBOT515621:2:Tyes-012081208
CBOT536232:0:Tno-012871287
CCHL340177:0:Tyes--0-
CCON360104:2:Tyes-0--
CCUR360105:0:Tyes-0--
CDES477974:0:Tyes-0--
CDIF272563:1:Tyes--00
CFET360106:0:Tyes-0--
CHOM360107:1:Tyes-0--
CHUT269798:0:Tyes-0--
CHYD246194:0:Tyes-777-0
CJAP155077:0:Tyes-0278-
CKLU431943:1:Tyes-0--
CKOR374847:0:Tyes--00
CNOV386415:0:Tyes-0457-
CPER195102:1:Tyes-0--
CPER195103:0:Tno-0--
CPER289380:3:Tyes-0--
CPHY357809:0:Tyes-01-
CPSY167879:0:Tyes-02942-
CSP501479:4:Fyes--0-
CSP501479:8:Fyes---0
CSP78:2:Tyes--00
CTET212717:0:Tyes-32200
CVIO243365:0:Tyes2139700
DARO159087:0:Tyes-0--
DDES207559:0:Tyes-0--
DETH243164:0:Tyes---0
DHAF138119:0:Tyes-0--
DOLE96561:0:Tyes---0
DPSY177439:2:Tyes102971
DRED349161:0:Tyes-147100
ECAR218491:0:Tyes2100
ECOL199310:0:Tno6846836820
ECOL316407:0:Tno6616606590
ECOL331111:6:Tno7267257240
ECOL362663:0:Tno210977
ECOL364106:1:Tno2101154
ECOL405955:2:Tyes6066056040
ECOL409438:6:Tyes7217207190
ECOL413997:0:Tno2100
ECOL439855:4:Tno-0-237
ECOL469008:0:Tno0122
ECOL481805:0:Tno012701
ECOL585034:0:Tno-0-226
ECOL585035:0:Tno-6656640
ECOL585055:0:Tno7667657640
ECOL585056:2:Tno-0-270
ECOL585057:0:Tno1812181318140
ECOL585397:0:Tno-0-233
ECOL83334:0:Tno2100
ECOLI:0:Tno6676666650
ECOO157:0:Tno2100
EFAE226185:3:Tyes--00
EFER585054:1:Tyes0122
ESP42895:1:Tyes-0-1414
FALN326424:0:Tyes--0-
FJOH376686:0:Tyes--0-
FNOD381764:0:Tyes--0-
FNUC190304:0:Tyes-0--
FPHI484022:1:Tyes---0
FRANT:0:Tno---0
FSP106370:0:Tyes-0--
FSUC59374:0:Tyes--0-
FTUL351581:0:Tno---0
FTUL393011:0:Tno---0
FTUL393115:0:Tyes---0
FTUL401614:0:Tyes--0755
FTUL418136:0:Tno---0
FTUL458234:0:Tno---0
GFOR411154:0:Tyes--60
GKAU235909:1:Tyes--0-
GMET269799:1:Tyes-0--
GSUL243231:0:Tyes-10880-
GTHE420246:1:Tyes-0--
GURA351605:0:Tyes-05923284
GVIO251221:0:Tyes-02131-
HARS204773:0:Tyes---0
HAUR316274:2:Tyes-14012380
HCHE349521:0:Tyes-011
HDUC233412:0:Tyes--0-
HHEP235279:0:Tyes---0
HMOD498761:0:Tyes-0805-
HMUK485914:1:Tyes--0-
HSOM228400:0:Tno--0-
ILOI283942:0:Tyes-0--
JSP375286:0:Tyes2100
KPNE272620:2:Tyes2100
KRAD266940:2:Fyes--05
LACI272621:0:Tyes--00
LBIF355278:2:Tyes--7890
LBIF456481:2:Tno--8290
LBOR355276:1:Tyes-8720-
LBOR355277:1:Tno-0722-
LBRE387344:2:Tyes--00
LCAS321967:1:Tyes---0
LGAS324831:0:Tyes--0-
LINN272626:1:Tno--00
LINT189518:1:Tyes-13790-
LINT267671:1:Tno-01025-
LINT363253:3:Tyes-0--
LJOH257314:0:Tyes--0327
LLAC272622:5:Tyes--00
LLAC272623:0:Tyes--00
LMON169963:0:Tno--00
LMON265669:0:Tyes--00
LPLA220668:0:Tyes--00
LPNE272624:0:Tno---0
LPNE297245:1:Fno---0
LPNE297246:1:Fyes---0
LPNE400673:0:Tno---0
LREU557436:0:Tyes--00
LSAK314315:0:Tyes--00
LSPH444177:1:Tyes-2520-
LWEL386043:0:Tyes--00
LXYL281090:0:Tyes--0-
MACE188937:0:Tyes--00
MAER449447:0:Tyes-405850020
MAQU351348:2:Tyes--0-
MBAR269797:1:Tyes--00
MBUR259564:0:Tyes---0
MEXT419610:0:Tyes--00
MFLA265072:0:Tyes--0-
MHUN323259:0:Tyes---0
MLAB410358:0:Tyes--0-
MLOT266835:2:Tyes--8650
MMAG342108:0:Tyes-4173-0
MMAR267377:0:Tyes---0
MMAR394221:0:Tyes--16410
MMAR402880:1:Tyes---0
MMAR426368:0:Tyes---0
MMAZ192952:0:Tyes--00
MSED399549:0:Tyes--00
MSME246196:0:Tyes-10-
MSP164756:1:Tno-130500
MSP164757:0:Tno-166800
MSP189918:2:Tyes-133300
MSP400668:0:Tyes-0--
MSP409:2:Tyes--0-
MSTA339860:0:Tyes---0
MSUC221988:0:Tyes-100
MTHE264732:0:Tyes-0285285
MXAN246197:0:Tyes--0-
NARO279238:0:Tyes--00
NEUR228410:0:Tyes--0-
NEUT335283:2:Tyes--0-
NHAM323097:2:Tyes--0-
NMEN374833:0:Tno--0-
NSP103690:6:Tyes--18910
NSP35761:1:Tyes--8640
NSP387092:0:Tyes--00
NWIN323098:0:Tyes--0-
OANT439375:5:Tyes-0--
OCAR504832:0:Tyes---0
PABY272844:0:Tyes--10300
PAER178306:0:Tyes---0
PAER208963:0:Tyes--00
PAER208964:0:Tno--00
PATL342610:0:Tyes-0--
PCAR338963:0:Tyes1035103410330
PDIS435591:0:Tyes--0-
PENT384676:0:Tyes--1530
PFLU205922:0:Tyes0122
PFLU216595:1:Tyes0122
PFLU220664:0:Tyes0122
PFUR186497:0:Tyes--01163
PGIN242619:0:Tyes--00
PHAL326442:1:Tyes-0--
PHOR70601:0:Tyes--00
PING357804:0:Tyes-0--
PINT246198:1:Tyes--0-
PLUM243265:0:Fyes--0-
PLUT319225:0:Tyes--00
PMAR146891:0:Tyes--1420
PMAR167539:0:Tyes--0-
PMAR167540:0:Tyes--0-
PMAR167542:0:Tyes--1520
PMAR167546:0:Tyes--1370
PMAR74546:0:Tyes--0-
PMAR74547:0:Tyes--0-
PMAR93060:0:Tyes--0-
PMUL272843:1:Tyes--0-
PNAP365044:8:Tyes--00
PPEN278197:0:Tyes--0203
PPRO298386:1:Tyes2100
PPUT160488:0:Tno--0-
PPUT351746:0:Tyes--0-
PPUT76869:0:Tno--0-
PRUM264731:0:Tyes---0
PSP117:0:Tyes--80
PSTU379731:0:Tyes--0-
PSYR223283:2:Tyes---0
PTHE370438:0:Tyes-11830-
PTOR263820:0:Tyes---0
RALB246199:0:Tyes-0--
RCAS383372:0:Tyes--0-
RETL347834:5:Tyes-0--
REUT264198:2:Tyes--0-
RLEG216596:3:Tyes--0-
RLEG216596:6:Tyes-0--
RMET266264:2:Tyes---0
RPAL258594:0:Tyes--0-
RPAL316055:0:Tyes--0-
RPAL316056:0:Tyes--0-
RPAL316057:0:Tyes--0-
RPAL316058:0:Tyes--0-
RPOM246200:1:Tyes--0-
RSOL267608:0:Tyes0122
RSP357808:0:Tyes--2110
RSPH349102:3:Tyes--0-
RXYL266117:0:Tyes---0
SACI330779:0:Tyes--00
SACI56780:0:Tyes-211221140
SAGA205921:0:Tno--00
SAGA208435:0:Tno---0
SAGA211110:0:Tyes--00
SAUR158878:1:Tno--00
SAUR158879:1:Tno--00
SAUR196620:0:Tno--00
SAUR273036:0:Tno--00
SAUR282458:0:Tno--00
SAUR282459:0:Tno--00
SAUR359786:1:Tno--00
SAUR359787:1:Tno--00
SAUR367830:3:Tno--00
SAUR418127:0:Tyes--00
SAUR426430:0:Tno--00
SAUR93061:0:Fno--00
SAUR93062:1:Tno--00
SAVE227882:1:Fyes-17682940
SBAL399599:3:Tyes-396200
SBAL402882:1:Tno-0--
SBOY300268:0:Tyes-0--
SBOY300268:1:Tyes---0
SCO:2:Fyes-212101618
SDEG203122:0:Tyes-03182-
SDYS300267:1:Tyes-0-2285
SELO269084:0:Tyes--0-
SENT209261:0:Tno-0--
SENT220341:0:Tno-0--
SENT295319:0:Tno-0--
SENT321314:2:Tno-0-304
SENT454169:2:Tno-0--
SEPI176279:1:Tyes-200
SFLE198214:0:Tyes-0-2111
SFLE373384:0:Tno-0867867
SFUM335543:0:Tyes-02418-
SGLO343509:3:Tyes---0
SHAL458817:0:Tyes-0--
SHIGELLA:0:Tno-0-2050
SLOI323850:0:Tyes-0--
SMED366394:1:Tyes--0-
SMEL266834:0:Tyes--0-
SMUT210007:0:Tyes--0-
SONE211586:1:Tyes-42700
SPEA398579:0:Tno-0--
SPNE488221:0:Tno---0
SPRO399741:1:Tyes-1862-0
SPYO160490:0:Tno--0-
SPYO186103:0:Tno--0-
SPYO193567:0:Tno--0-
SPYO198466:0:Tno--0-
SPYO286636:0:Tno--0-
SPYO293653:0:Tno--0-
SPYO370551:0:Tno--0-
SPYO370553:0:Tno--0-
SRUB309807:1:Tyes--21260
SSED425104:0:Tyes-02284-
SSOL273057:0:Tyes--0-
SSON300269:0:Tyes-0--
SSON300269:1:Tyes---0
SSP1131:0:Tyes--0-
SSP1148:0:Tyes--0-
SSP292414:2:Tyes--00
SSP321327:0:Tyes-2510-
SSP321332:0:Tyes-01586-
SSP644076:6:Fyes--00
SSP64471:0:Tyes--0-
SSP84588:0:Tyes--0-
SSP94122:1:Tyes-0--
STHE264199:0:Tyes---0
STHE292459:0:Tyes-100114940
STHE299768:0:Tno---0
STHE322159:2:Tyes--01115
STOK273063:0:Tyes--00
STYP99287:1:Tyes-0--
SWOL335541:0:Tyes--2790
TCRU317025:0:Tyes-0--
TDEN326298:0:Tyes-011
TELO197221:0:Tyes--0-
TERY203124:0:Tyes--01171
TKOD69014:0:Tyes--4040
TPEN368408:1:Tyes--00
TPSE340099:0:Tyes---0
TROS309801:1:Tyes-0-1198
TSP1755:0:Tyes---0
TTEN273068:0:Tyes-1136-0
TTUR377629:0:Tyes-0-176
VFIS312309:1:Tyes--00
VPAR223926:0:Tyes--00
WSUC273121:0:Tyes-0--
XAUT78245:1:Tyes--0-
XAXO190486:0:Tyes2100
XFAS160492:2:Tno-0--
XFAS183190:1:Tyes-0--
XFAS405440:0:Tno-0--
XORY291331:0:Tno0122
XORY342109:0:Tyes0122
XORY360094:0:Tno4200
YENT393305:1:Tyes2100
YPES187410:5:Tno2100
YPES214092:3:Tno0122
YPES349746:2:Tno0122
YPES360102:3:Tyes0122
YPES377628:2:Tno-0--
YPES386656:2:Tno2100
YPSE273123:2:Tno0122
YPSE349747:2:Tno2100
ZMOB264203:0:Tyes--00



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