CANDIDATE ID: 795

CANDIDATE ID: 795

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9915567e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   1.6500000e-43

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7906 (insO-2) (b4285)
   Products of gene:
     - G7906-MONOMER (KpLE2 phage-like element; partial transposase)

- G7904 (insN-2) (b4283)
   Products of gene:
     - G7904-MONOMER (KpLE2 phage-like element; partial regulator of insertion element IS911B (interrupted))

- G6132 (insO-1) (b0257)
   Products of gene:
     - G6132-MONOMER (CP4-6 prophage; partial transposase of insertion element IS911A, interrupted by insertion of IS30 element)

- G6130 (insN-1) (b0255)
   Products of gene:
     - G6130-MONOMER (CP4-6 prophage; partial regulator of insertion element IS911A)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 75
Effective number of orgs (counting one per cluster within 468 clusters): 51

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
VVUL216895 ncbi Vibrio vulnificus CMCP64
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SSON300269 ncbi Shigella sonnei Ss0463
SPRO399741 ncbi Serratia proteamaculans 5684
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SBOY300268 ncbi Shigella boydii Sb2274
SBAL399599 ncbi Shewanella baltica OS1954
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RMET266264 ncbi Ralstonia metallidurans CH344
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PPUT76869 ncbi Pseudomonas putida GB-13
PPUT351746 ncbi Pseudomonas putida F13
PPUT160488 ncbi Pseudomonas putida KT24404
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 373
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PENT384676 ncbi Pseudomonas entomophila L484
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
NEUT335283 ncbi Nitrosomonas eutropha C914
MXAN246197 ncbi Myxococcus xanthus DK 16223
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL14
MLOT266835 ncbi Mesorhizobium loti MAFF3030993
MAQU351348 ncbi Marinobacter aquaeolei VT84
LPNE400673 ncbi Legionella pneumophila Corby3
LCHO395495 ncbi Leptothrix cholodnii SP-63
HARS204773 ncbi Herminiimonas arsenicoxydans3
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-23
FSP1855 Frankia sp. EAN1pec3
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a3
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL481805 ncbi Escherichia coli ATCC 87393
ECOL469008 ncbi Escherichia coli BL21(DE3)3
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
DRED349161 ncbi Desulfotomaculum reducens MI-13
DPSY177439 ncbi Desulfotalea psychrophila LSv543
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G203
CJAP155077 Cellvibrio japonicus4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BCEN331272 ncbi Burkholderia cenocepacia HI24244
AMAR329726 ncbi Acaryochloris marina MBIC110173
ABOR393595 ncbi Alcanivorax borkumensis SK23


Names of the homologs of the genes in the group in each of these orgs
  G7906   G7904   G6132   G6130   
YPSE273123 PYV0035PYV0009PYV0035PYV0009
YPES386656 YPDSF_4005YPDSF_4028YPDSF_4005YPDSF_4028
YPES360102 YPA_CD0046YPA_CD0045YPA_CD0066YPA_CD0045
YPES349746 YPANGOLA_B0081YPANGOLA_B0082YPANGOLA_B0081YPANGOLA_B0082
YPES214092 YPCD1.15CYPCD1.16CYPCD1.82CYPCD1.16C
YENT393305 YE3877YE3878YE3877YE3878
VVUL216895 VV1_0385VV1_0386VV1_0385VV1_0386
VCHO345073 VC0395_A2359VC0395_A2360VC0395_A2359VC0395_A2360
VCHO VCA0508VCA0507VCA0508VCA0507
TCRU317025 TCR_2076TCR_1853TCR_2076TCR_1853
SSON300269 SSO_2298SSO_2452SSO_P120
SPRO399741 SPRO_3135SPRO_3134SPRO_3135SPRO_3134
SONE211586 SO_A0145SO_4581SO_A0090SO_4581
SLOI323850 SHEW_3830SHEW_3829SHEW_3830SHEW_3829
SHIGELLA S0235S2565S0234S2565
SFLE373384 SFV_0551SFV_1350SFV_0551SFV_1923
SFLE198214 AAN45642.1AAN45641.1AAN45642.1AAN45641.1
SERY405948 SACE_2566SACE_2551SACE_2566SACE_2551
SENT321314 SCH_2698SCH_2697SCH_2698SCH_2697
SDYS300267 SDY_4470SDY_0722SDY_1992SDY_0722
SDEN318161 SDEN_1049SDEN_1050SDEN_1049SDEN_1050
SBOY300268 SBO_P146SBO_P145SBO_0268SBO_P145
SBAL399599 SBAL195_4651SBAL195_4658SBAL195_4651SBAL195_4658
RSOL267608 RSC2313RSC2314RSC2313RSC2314
RMET266264 RMET_3942RMET_3943RMET_1564RMET_3943
PSYR223283 PSPTO_3044PSPTO_4695PSPTO_3044PSPTO_4695
PSYR205918 PSYR_0988PSYR_0987PSYR_0988PSYR_0987
PSTU379731 PST_1864PST_1865PST_1864PST_1865
PSP56811 PSYCPRWF_0234PSYCPRWF_0235PSYCPRWF_0234PSYCPRWF_0235
PPUT76869 PPUTGB1_3806PPUTGB1_3805PPUTGB1_5425
PPUT351746 PPUT_0415PPUT_1373PPUT_1373
PPUT160488 PP_4420PP_4419PP_4420PP_4419
PLUM243265 PLU1024PLU1023PLU1024PLU1023
PING357804 PING_1183PING_1182PING_1182
PFLU216595 PFLU2402PFLU5851PFLU2402PFLU5851
PENT384676 PSEEN3944PSEEN1974PSEEN3944PSEEN1974
PCAR338963 PCAR_2833PCAR_2834PCAR_2833PCAR_2834
PARC259536 PSYC_1453PSYC_1452PSYC_1453PSYC_1452
PAER208964 PA0978PA0979PA0978PA0979
PAER208963 PA14_03300PA14_03290PA14_03300PA14_03290
NEUT335283 NEUT_1814NEUT_1813NEUT_2192NEUT_1813
MXAN246197 MXAN_5436MXAN_1765MXAN_1765
MSP409 M446_0188M446_6988M446_0188
MSP400668 MMWYL1_1763MMWYL1_1762MMWYL1_1763MMWYL1_1762
MLOT266835 MLR6150MSR5972MSR5972
MAQU351348 MAQU_1001MAQU_3970MAQU_1001MAQU_3970
LPNE400673 LPC_2156LPC_2155LPC_2155
LCHO395495 LCHO_4143LCHO_4144LCHO_4144
HARS204773 HEAR1140HEAR1141HEAR1141
GTHE420246 GTNG_0758GTNG_1592GTNG_0758
FSP1855 FRANEAN1_4469FRANEAN1_3068FRANEAN1_4469
ECOO157 Z5089Z5088Z5089Z5088
ECOL83334 ECS4537ECS4535ECS4537ECS4535
ECOL585397 ECED1_5145ECED1_2842ECED1_5145
ECOL585057 ECIAI39_4763ECIAI39_4762ECIAI39_4763ECIAI39_4762
ECOL585056 ECUMN_4852ECUMN_0318ECUMN_4846ECUMN_4851
ECOL585055 EC55989_3273EC55989_3271EC55989_3273EC55989_3271
ECOL585035 ECS88_4857ECS88_4703ECS88_4857ECS88_4855
ECOL481805 ECOLC_3407ECOLC_3409ECOLC_3407
ECOL469008 ECBD_3759ECBD_3755ECBD_3759
ECOL439855 ECSMS35_1101ECSMS35_A0090ECSMS35_A0092ECSMS35_A0090
ECOL413997 ECB_04146ECB_04145ECB_04146ECB_04145
ECOL409438 ECSE_1419ECSE_4580ECSE_1419ECSE_4580
ECOL405955 APECO1_2258APECO1_2269APECO1_2258APECO1_2269
ECOL362663 ECP_3806ECP_3807ECP_3806ECP_3807
ECOL331111 ECE24377A_3328ECE24377A_3329ECE24377A_3328ECE24377A_3329
ECOL316407 ECK0259:JW0247:B0257ECK0257:JW5024:B0255ECK0259:JW0247:B0257ECK0257:JW5024:B0255
DRED349161 DRED_1014DRED_1013DRED_1014
DPSY177439 DP1714DP1713DP1713
DDES207559 DDE_1298DDE_1745DDE_1745
CJAP155077 CJA_1427CJA_1428CJA_1427CJA_1428
BPSE272560 BPSS2148BPSS2148ABPSS2148BPSS2148A
BCEN331272 BCEN2424_3233BCEN2424_3234BCEN2424_3233BCEN2424_3234
AMAR329726 AM1_A0193AM1_A0196AM1_A0193
ABOR393595 ABO_2081ABO_0227ABO_0227


Organism features enriched in list (features available for 70 out of the 75 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0000392192
Disease:Bubonic_plague 0.002265746
Disease:Dysentery 2.467e-666
Disease:Gastroenteritis 0.0018506613
Disease:Plant_rot 0.001666133
Disease:Urinary_tract_infection 0.005894434
Endospores:No 0.002158815211
GC_Content_Range4:0-40 5.204e-141213
GC_Content_Range4:40-60 1.254e-1153224
GC_Content_Range7:30-40 3.496e-101166
GC_Content_Range7:40-50 0.006170422117
GC_Content_Range7:50-60 4.753e-831107
Genome_Size_Range5:2-4 0.000203011197
Genome_Size_Range5:4-6 1.394e-945184
Genome_Size_Range5:6-10 0.00037881447
Genome_Size_Range9:2-3 0.00004533120
Genome_Size_Range9:4-5 0.00001522596
Genome_Size_Range9:5-6 0.00095302088
Genome_Size_Range9:6-8 0.00212531138
Gram_Stain:Gram_Neg 4.613e-860333
Gram_Stain:Gram_Pos 6.919e-73150
Habitat:Multiple 0.006947030178
Motility:No 0.00002145151
Motility:Yes 0.000025048267
Oxygen_Req:Facultative 0.000019740201
Shape:Rod 1.460e-862347
Temp._range:Mesophilic 0.006843264473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 515
Effective number of orgs (counting one per cluster within 468 clusters): 403

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317580
YPES377628 ncbi Yersinia pestis Nepal5160
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110181
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103311
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae1
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-101
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80041
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3061
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL196600 ncbi Vibrio vulnificus YJ0160
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106330
VFIS312309 ncbi Vibrio fischeri ES1140
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252591
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT20
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB31
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SMUT210007 ncbi Streptococcus mutans UA1590
SMEL266834 ncbi Sinorhizobium meliloti 10211
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis1
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91500
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT180
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty20
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT264198 ncbi Ralstonia eutropha JMP1340
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 230
PPRO298386 ncbi Photobacterium profundum SS90
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp1
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU220664 ncbi Pseudomonas fluorescens Pf-50
PFLU205922 ncbi Pseudomonas fluorescens Pf0-11
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491881
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP266779 ncbi Chelativorans sp. BNC11
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM11
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE297246 ncbi Legionella pneumophila Paris0
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785780
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL11
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ESP42895 Enterobacter sp.0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECOL585034 ncbi Escherichia coli IAI10
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10430
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
DRAD243230 ncbi Deinococcus radiodurans R10
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124720
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE450
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CAULO ncbi Caulobacter crescentus CB150
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BTHA271848 ncbi Burkholderia thailandensis E2640
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BSP376 Bradyrhizobium sp.0
BSP36773 Burkholderia sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPSE320373 ncbi Burkholderia pseudomallei 6680
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BMAL320389 ncbi Burkholderia mallei NCTC 102470
BMAL320388 ncbi Burkholderia mallei SAVP10
BMAL243160 ncbi Burkholderia mallei ATCC 233440
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145791
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAMB398577 ncbi Burkholderia ambifaria MC40-61
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN11
ASP62928 ncbi Azoarcus sp. BH720
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AHYD196024 Aeromonas hydrophila dhakensis0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7906   G7904   G6132   G6130   
ZMOB264203
YPSE349747
YPES377628
XORY342109 XOO2666
XORY291331 XOO2820
XFAS405440
XFAS183190
XFAS160492
XCAM487884 XCC-B100_0701
XCAM316273 XCAORF_2982
XCAM314565 XC_4233
XAXO190486 XAC2634
WSUC273121
WPIP955
WPIP80849
VVUL196600
VPAR223926
VFIS312309
VEIS391735 VEIS_4708
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415 TBD_0928
TDEN243275
TACI273075
SWOL335541
STYP99287
STRO369723
STOK273063
STHE322159 STER_1412
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SSED425104 SSED_0470
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579
SMUT210007
SMEL266834 SMC03248
SMED366394
SMAR399550
SLAC55218 SL1157_A0010
SHAL458817
SHAE279808
SGOR29390
SGLO343509
SFUM335543
SEPI176280
SEPI176279
SENT295319
SENT220341
SENT209261
SELO269084
SDEG203122
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RSP101510
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316056
RPAL316055
RPAL258594
RFER338969
RFEL315456
REUT264198
RETL347834
RDEN375451 RD1_3452
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSP312153
PSP117 RB1189
PRUM264731
PPRO298386
PPEN278197
PMUL272843
PMOB403833
PMEN399739 PMEN_4601
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PFLU220664
PFLU205922 PFL_2982
PDIS435591
PCRY335284
PATL342610
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109
OCAR504832
OANT439375 OANT_4499
NWIN323098
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156
NEUR228410 NE0155
NARO279238
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP266779 MESO_4375
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPET420662 MPE_B0586
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPNE297246
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623 L199247
LLAC272622 LACR_1672
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
KRAD266940
KPNE272620
JSP290400
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124 HHAL_1288
HDUC233412
HCHE349521
HBUT415426
HAUR316274
HACI382638
GVIO251221
GURA351605
GSUL243231
GOXY290633
GMET269799
GKAU235909 GK0159
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP106370 FRANCCI3_1727
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
FALN326424
ESP42895
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECOL585034
ECHA205920
ECAR218491
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580 DSHI_3739
DRAD243230
DOLE96561 DOLE_1212
DNOD246195
DGEO319795
DETH243164
DARO159087
CVIO243365
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP501479
CSAL290398
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIF272563
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402
CAULO
CACE272562
CABO218497
BWEI315730 BCERKBAB4_1194
BTUR314724
BTRI382640
BTHU412694
BTHU281309 BT9727_1593
BTHE226186
BTHA271848
BSUI470137
BSUI204722
BSUB
BSP376
BSP36773
BSP107806
BQUI283165
BPUM315750
BPSE320373
BPSE320372
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BMAL320389
BMAL320388
BMAL243160
BLON206672
BLIC279010
BJAP224911 BSR1972
BHER314723
BHEN283166
BHAL272558 BH3445
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264 BCA_A0177
BCER405917
BCER315749
BCER288681
BCER226900 BC_2821
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BANT592021 BAA_A0132
BANT568206 BAMEG_A0126
BANT261594
BANT260799
BAMY326423
BAMB398577 BAMMC406_6588
BAFZ390236
BABO262698
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114 EBA5506
ASP62928
ASP1667
APLE434271
APLE416269
APHA212042
APER272557
AORE350688 CLOS_0737
ANAE240017
AMET293826 AMET_4732
AMAR234826
ALAI441768
AHYD196024
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ACAU438753
ABUT367737
ABAU360910
ABAC204669
AAVE397945
AAUR290340
AAEO224324


Organism features enriched in list (features available for 482 out of the 515 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.256e-69092
Disease:Bubonic_plague 0.000718416
Disease:Gastroenteritis 0.0023015613
Disease:Opportunistic_infections 0.003567215
Endospores:No 0.0002967189211
GC_Content_Range4:0-40 4.788e-17209213
GC_Content_Range4:40-60 6.939e-11156224
GC_Content_Range7:0-30 0.00008664747
GC_Content_Range7:30-40 1.051e-11162166
GC_Content_Range7:40-50 0.003760787117
GC_Content_Range7:50-60 2.014e-769107
Genome_Size_Range5:0-2 3.472e-14154155
Genome_Size_Range5:2-4 0.0000199180197
Genome_Size_Range5:4-6 1.292e-12121184
Genome_Size_Range5:6-10 0.00001452747
Genome_Size_Range9:0-1 0.00515852727
Genome_Size_Range9:1-2 2.927e-11127128
Genome_Size_Range9:2-3 8.186e-6114120
Genome_Size_Range9:4-5 0.00001326496
Genome_Size_Range9:5-6 5.065e-65788
Genome_Size_Range9:6-8 0.00049882338
Genome_Size_Range9:8-10 0.008730249
Gram_Stain:Gram_Neg 1.231e-12245333
Gram_Stain:Gram_Pos 4.385e-10146150
Habitat:Multiple 0.0031060136178
Motility:No 9.948e-6141151
Motility:Yes 3.084e-8196267
Optimal_temp.:- 0.0062298202257
Oxygen_Req:Anaerobic 0.001662694102
Oxygen_Req:Facultative 7.985e-6147201
Shape:Coccus 9.145e-78182
Shape:Rod 9.706e-13257347
Shape:Spiral 0.00961523334
Temp._range:Mesophilic 0.0001724379473
Temp._range:Thermophilic 0.00809513435



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)195650.4417
PWY-46 (putrescine biosynthesis III)138510.4085
GALACTITOLCAT-PWY (galactitol degradation)73350.4020



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7904   G6132   G6130   
G79060.9991180.9993840.999104
G79040.9988710.999611
G61320.998846
G6130



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PAIRWISE BLAST SCORES:

  G7906   G7904   G6132   G6130   
G79060.0f0-2.9e-51-
G7904-0.0f0-3.3e-43
G61322.9e-51-0.0f0-
G6130-3.3e-43-0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6130 G6132 (centered at G6132)
G7904 G7906 (centered at G7906)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7906   G7904   G6132   G6130   
98/623103/62395/62391/623
ABOR393595:0:Tyes18930-0
AMAR329726:8:Tyes020-
AMET293826:0:Tyes-0--
AORE350688:0:Tyes-0--
ASAL382245:5:Tyes-0-0
ASP232721:2:Tyes0-0-
ASP62977:0:Tyes519-0-
ASP76114:2:Tyes--0-
BAMB339670:3:Tno-0-0
BAMB398577:0:Tno0---
BANT568206:1:Tyes--0-
BANT592021:1:Tno--0-
BCEN331271:1:Tno-0-0
BCEN331272:2:Tyes0101
BCER226900:1:Tyes--0-
BCER572264:0:Tno--0-
BHAL272558:0:Tyes-0--
BJAP224911:0:Fyes-0--
BPET94624:0:Tyes0-712-
BPSE272560:0:Tyes0101
BTHU281309:1:Tno--0-
BVIE269482:3:Tyes0-0-
BWEI315730:4:Tyes--0-
BXEN266265:0:Tyes0-0-
CDIP257309:0:Tyes-0-0
CJAP155077:0:Tyes0101
CSP78:2:Tyes0-0-
DDES207559:0:Tyes0453-453
DHAF138119:0:Tyes-0-0
DOLE96561:0:Tyes0---
DPSY177439:2:Tyes10-0
DRED349161:0:Tyes-101
DSHI398580:4:Tyes0---
ECOL199310:0:Tno--01
ECOL316407:0:Tno2020
ECOL331111:6:Tno0101
ECOL362663:0:Tno0101
ECOL364106:1:Tno-0-0
ECOL405955:2:Tyes110110
ECOL409438:6:Tyes0323703237
ECOL413997:0:Tno1010
ECOL439855:3:Tno-020
ECOL439855:4:Tno0---
ECOL469008:0:Tno-303
ECOL481805:0:Tno-020
ECOL585035:0:Tno1540154151
ECOL585055:0:Tno3030
ECOL585056:2:Tno4522045164521
ECOL585057:0:Tno1010
ECOL585397:0:Tno-223902239
ECOL83334:0:Tno2020
ECOLI:0:Tno4106410420
ECOO157:0:Tno1010
EFER585054:1:Tyes0-0-
FSP106370:0:Tyes--0-
FSP1855:0:Tyes-137101371
GKAU235909:1:Tyes--0-
GTHE420246:1:Tyes-08200
HARS204773:0:Tyes01-1
HHAL349124:0:Tyes0---
ILOI283942:0:Tyes-0-0
JSP375286:0:Tyes0-0-
LCHO395495:0:Tyes01-1
LLAC272622:5:Tyes-0--
LLAC272623:0:Tyes-0--
LPNE272624:0:Tno-0-0
LPNE297245:1:Fno-0-0
LPNE400673:0:Tno10-0
MAQU351348:0:Tyes-0-0
MAQU351348:2:Tyes0-0-
MLOT266835:2:Tyes1560-0
MPET420662:0:Tyes-0--
MSP266779:2:Tyes--0-
MSP400668:0:Tyes1010
MSP409:1:Tyes-0--
MSP409:2:Tyes0-0-
MSUC221988:0:Tyes-0-0
MXAN246197:0:Tyes35330-0
NEUR228410:0:Tyes--0-
NEUT335283:2:Tyes103700
OANT439375:3:Tyes--0-
PAER208963:0:Tyes1010
PAER208964:0:Tno0101
PARC259536:0:Tyes1010
PCAR338963:0:Tyes0101
PENT384676:0:Tyes1840018400
PFLU205922:0:Tyes0---
PFLU216595:1:Tyes0333403334
PING357804:0:Tyes10-0
PLUM243265:0:Fyes1010
PMEN399739:0:Tyes-0--
PNAP365044:7:Tyes-0-0
PPUT160488:0:Tno1010
PPUT351746:0:Tyes0976-976
PPUT76869:0:Tno101634-
PSP117:0:Tyes-0--
PSP296591:2:Tyes-0-0
PSP56811:2:Tyes0101
PSTU379731:0:Tyes0101
PSYR205918:0:Tyes1010
PSYR223283:2:Tyes0162801628
RDEN375451:4:Tyes0---
REUT381666:0:Tyes-0-0
RLEG216596:1:Tyes0-0-
RMAS416276:1:Tyes0-0-
RMET266264:1:Tyes01-1
RMET266264:2:Tyes--0-
RPAL316057:0:Tyes-0-0
RSOL267608:1:Tyes0101
SBAL399599:1:Tyes0707
SBAL402882:0:Tno-0-0
SBOY300268:0:Tyes10-0
SBOY300268:1:Tyes--0-
SDEN318161:0:Tyes0101
SDYS300267:1:Tyes3502012000
SENT321314:2:Tno1010
SENT454169:2:Tno0-0-
SERY405948:0:Tyes150150
SFLE198214:0:Tyes1010
SFLE373384:0:Tno075801294
SHIGELLA:0:Tno0203712037
SLAC55218:0:Fyes--0-
SLOI323850:0:Tyes1010
SMEL266834:2:Tyes--0-
SONE211586:0:Tyes47-0-
SONE211586:1:Tyes-0-0
SPRO399741:1:Tyes1010
SSED425104:0:Tyes0---
SSON300269:0:Tyes---0
SSON300269:1:Tyes0-151-
SSP94122:1:Tyes-0-0
STHE322159:2:Tyes-0--
TCRU317025:0:Tyes22502250
TDEN292415:0:Tyes0---
VCHO:1:Fyes1010
VCHO345073:1:Tno0101
VEIS391735:1:Tyes-0--
VVUL216895:1:Tno0101
XAUT78245:1:Tyes-0-0
XAXO190486:0:Tyes0---
XCAM190485:0:Tyes0-0-
XCAM314565:0:Tno0---
XCAM316273:0:Tno0---
XCAM487884:0:Tno0---
XORY291331:0:Tno0---
XORY342109:0:Tyes0---
XORY360094:0:Tno0-5678-
YENT393305:1:Tyes0101
YPES187410:1:Tno0-0-
YPES214092:1:Tno01631
YPES349746:0:Tno0101
YPES360102:1:Tyes10250
YPES386656:0:Tno023023
YPSE273123:1:Tno240240



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