CANDIDATE ID: 816

CANDIDATE ID: 816

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9939100e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG13238 (cobU) (b1993)
   Products of gene:
     - COBU-MONOMER (CobU)
     - COBU-CPLX (cobinamide-P guanylyltransferase / cobinamide kinase)
       Reactions:
        adenosyl-cobinamide phosphate + GTP + 3 H+  ->  adenosylcobinamide-GDP + diphosphate
         In pathways
         P381-PWY (P381-PWY)
         PWY-5507 (PWY-5507)
         PWY-5508 (PWY-5508)
         PWY-5509 (PWY-5509)
         COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)
         PWY-6269 (PWY-6269)
        adenosylcobinamide + ATP  ->  adenosyl-cobinamide phosphate + ADP + 2 H+
         In pathways
         COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)

- EG12334 (btuF) (btuF)
   Products of gene:
     - EG12334-MONOMER (periplasmic vitamin B12 binding protein)
     - ABC-5-CPLX (vitamin B12 ABC transporter)
       Reactions:
        ATP + cob(I)alamin[periplasmic space] + H2O  ->  ADP + phosphate + cob(I)alamin[cytosol]
     - CPLX0-1862 (vitamin B12 transport system)
       Reactions:
        cob(I)alamin[extracellular space]  ->  cob(I)alamin[cytosol]

- EG12151 (cobT) (b1991)
   Products of gene:
     - DMBPPRIBOSYLTRANS-MONOMER (CobT)
     - DMBPPRIBOSYLTRANS-CPLX (nicotinate-nucleotide dimethylbenzimidazole phosphoribosyltransferase)
       Reactions:
        nicotinate mononucleotide + 5,6-dimethylbenzimidazole  ->  nicotinate + alpha-ribazole-5'-P + H+
         In pathways
         P381-PWY (P381-PWY)
         PWY-5507 (PWY-5507)
         PWY-5508 (PWY-5508)
         PWY-5509 (PWY-5509)
         COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)
         PWY-6269 (PWY-6269)

- EG12150 (cobS) (b1992)
   Products of gene:
     - COBS-MONOMER (cobalamin 5'-phosphate synthase / cobalamin synthase)
       Reactions:
        adenosylcobinamide-GDP + alpha-ribazole-5'-P  =  adenosylcobalamin 5'-phosphate + GMP + H+
         In pathways
         PWY-5507 (PWY-5507)
         PWY-5509 (PWY-5509)
        adenosylcobinamide-GDP + alpha-ribazole  ->  coenzyme B12 + GMP + 3 H+
         In pathways
         P381-PWY (P381-PWY)
         PWY-5508 (PWY-5508)
         COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)
         PWY-6269 (PWY-6269)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 264
Effective number of orgs (counting one per cluster within 468 clusters): 195

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
XAUT78245 ncbi Xanthobacter autotrophicus Py23
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTHE300852 ncbi Thermus thermophilus HB84
TTHE262724 ncbi Thermus thermophilus HB274
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB43
TSP1755 Thermoanaerobacter sp.3
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332233
TLET416591 ncbi Thermotoga lettingae TMO3
TFUS269800 ncbi Thermobifida fusca YX4
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12513
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TDEN243275 ncbi Treponema denticola ATCC 354054
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STRO369723 ncbi Salinispora tropica CNB-4404
STHE292459 ncbi Symbiobacterium thermophilum IAM 148633
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSP292414 ncbi Ruegeria sp. TM10403
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4193
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis3
SHIGELLA ncbi Shigella flexneri 2a str. 2457T3
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEG203122 ncbi Saccharophagus degradans 2-404
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2273
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAVE227882 ncbi Streptomyces avermitilis MA-46803
SARE391037 ncbi Salinispora arenicola CNS-2054
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99414
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170293
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.13
RSP357808 ncbi Roseiflexus sp. RS-14
RSP101510 ncbi Rhodococcus jostii RHA13
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPOM246200 ncbi Ruegeria pomeroyi DSS-33
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL316055 ncbi Rhodopseudomonas palustris BisA533
RPAL258594 ncbi Rhodopseudomonas palustris CGA0093
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38413
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 423
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
RCAS383372 ncbi Roseiflexus castenholzii DSM 139414
PTHE370438 ncbi Pelotomaculum thermopropionicum SI3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30003
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a3
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.3
PSP296591 ncbi Polaromonas sp. JS6664
PRUM264731 ncbi Prevotella ruminicola 233
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUT319225 ncbi Chlorobium luteolum DSM 2734
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PGIN242619 ncbi Porphyromonas gingivalis W833
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PDIS435591 ncbi Parabacteroides distasonis ATCC 85033
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
PACN267747 ncbi Propionibacterium acnes KPA1712024
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NSP103690 ncbi Nostoc sp. PCC 71203
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra3
MTUB336982 ncbi Mycobacterium tuberculosis F113
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MTBRV ncbi Mycobacterium tuberculosis H37Rv3
MTBCDC ncbi Mycobacterium tuberculosis CDC15513
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP189918 ncbi Mycobacterium sp. KMS3
MSP164757 ncbi Mycobacterium sp. JLS3
MSP164756 ncbi Mycobacterium sp. MCS3
MSME246196 ncbi Mycobacterium smegmatis MC2 1553
MPET420662 ncbi Methylibium petroleiphilum PM14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK3
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath3
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P23
MBOV233413 ncbi Mycobacterium bovis AF2122/973
MAVI243243 ncbi Mycobacterium avium 1043
MAQU351348 ncbi Marinobacter aquaeolei VT84
MABS561007 ncbi Mycobacterium abscessus ATCC 199773
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53343
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LREU557436 ncbi Lactobacillus reuteri DSM 200163
LMON265669 ncbi Listeria monocytogenes 4b F23653
LMON169963 ncbi Listeria monocytogenes EGD-e3
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1304
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566014
LINN272626 ncbi Listeria innocua Clip112623
LCHO395495 ncbi Leptothrix cholodnii SP-64
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1974
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5504
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS13
HNEP81032 Hyphomonas neptunium3
HMOD498761 ncbi Heliobacterium modesticaldum Ice13
HHAL349124 ncbi Halorhodospira halophila SL14
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74213
GURA351605 ncbi Geobacter uraniireducens Rf43
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA3
GMET269799 ncbi Geobacter metallireducens GS-153
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FSP1855 Frankia sp. EAN1pec3
FSP106370 ncbi Frankia sp. CcI33
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255864
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B14
FJOH376686 ncbi Flavobacterium johnsoniae UW1013
FALN326424 ncbi Frankia alni ACN14a3
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough3
DSP255470 ncbi Dehalococcoides sp. CBDB14
DSP216389 ncbi Dehalococcoides sp. BAV14
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-13
DRAD243230 ncbi Deinococcus radiodurans R14
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DGEO319795 ncbi Deinococcus geothermalis DSM 113004
DETH243164 ncbi Dehalococcoides ethenogenes 1954
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CTET212717 ncbi Clostridium tetani E884
CTEP194439 ncbi Chlorobium tepidum TLS4
CSP78 Caulobacter sp.3
CSP501479 Citreicella sp. SE453
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPHY357809 ncbi Clostridium phytofermentans ISDg3
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CNOV386415 ncbi Clostridium novyi NT4
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130323
CEFF196164 ncbi Corynebacterium efficiens YS-3143
CDIF272563 ncbi Clostridium difficile 6303
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CCHL340177 ncbi Chlorobium chlorochromatii CaD34
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6573
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT498213 ncbi Clostridium botulinum B1 str. Okra3
CBOT441772 ncbi Clostridium botulinum F str. Langeland3
CBOT441771 ncbi Clostridium botulinum A str. Hall3
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193973
CBOT36826 Clostridium botulinum A3
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CACE272562 ncbi Clostridium acetobutylicum ATCC 8243
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23083
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHAL272558 ncbi Bacillus halodurans C-1254
BFRA295405 ncbi Bacteroides fragilis YCH463
BFRA272559 ncbi Bacteroides fragilis NCTC 93433
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9413
AVAR240292 ncbi Anabaena variabilis ATCC 294133
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
AORE350688 ncbi Alkaliphilus oremlandii OhILAs3
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ACEL351607 ncbi Acidothermus cellulolyticus 11B3
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  EG13238   EG12334   EG12151   EG12150   
YENT393305 YE2710YE0738YE2707YE2709
XORY360094 XOOORF_3966XOOORF_3965XOOORF_3963
XORY342109 XOO1240XOO1241XOO1243
XORY291331 XOO1350XOO1351XOO1353
XCAM487884 XCC-B100_1135XCC-B100_1136XCC-B100_1138
XCAM316273 XCAORF_3397XCAORF_3396XCAORF_3393
XCAM314565 XC_1098XC_1099XC_1101
XCAM190485 XCC3060XCC3059XCC3057
XAXO190486 XAC3187XAC3186XAC3184
XAUT78245 XAUT_3776XAUT_3321XAUT_4260
VVUL216895 VV1_2786VV1_0560VV1_2788VV1_2787
VVUL196600 VV1476VV0633VV1474VV1475
VPAR223926 VP1306VP0477VP1304VP1305
VCHO345073 VC0395_A0861VC0395_A1959VC0395_A0859VC0395_A0860
VCHO VC1239VC2381VC1237VC1238
TTUR377629 TERTU_3615TERTU_3620TERTU_3616TERTU_3618
TTHE300852 TTHB066TTHA0746TTHB048TTHB046
TTHE262724 TT_P0023TT_C0390TT_P0005TT_P0004
TTEN273068 TTE0381TTE0372TTE0382
TSP1755 TETH514_0305TETH514_1934TETH514_0306
TPSE340099 TETH39_1895TETH39_1904TETH39_1894
TLET416591 TLET_1237TLET_1275TLET_1236
TFUS269800 TFU_0997TFU_0656TFU_2222TFU_0996
TDEN326298 TMDEN_0112TMDEN_0117TMDEN_0111
TDEN292415 TBD_2713TBD_1122TBD_2712TBD_2710
TDEN243275 TDE_2382TDE_2234TDE_0880TDE_2383
STYP99287 STM2018STM0206STM2016STM2017
STRO369723 STROP_3313STROP_4081STROP_3546STROP_3314
STHE292459 STH1928STH1929STH1926
SSP94122 SHEWANA3_3276SHEWANA3_3272SHEWANA3_3278SHEWANA3_3277
SSP644076 SCH4B_1300SCH4B_3882SCH4B_3881
SSP321327 CYA_2240CYA_1855CYA_2408
SSP292414 TM1040_0455TM1040_0578TM1040_0577
SSON300269 SSO_2054SSO_0170SSO_2052SSO_2053
SSED425104 SSED_3732SSED_3729SSED_3734SSED_3733
SPEA398579 SPEA_3378SPEA_3374SPEA_3380SPEA_3379
SONE211586 SO_1037SO_3709SO_1035SO_1036
SMEL266834 SMC04305SMC04214SMC04215
SMED366394 SMED_1761SMED_1603SMED_1604
SLOI323850 SHEW_0716SHEW_0719SHEW_0714SHEW_0715
SLAC55218 SL1157_0582SL1157_3222SL1157_3223
SHIGELLA YADTCOBTCOBS
SHAL458817 SHAL_3455SHAL_3452SHAL_3458SHAL_3456
SFUM335543 SFUM_2608SFUM_2741SFUM_0323SFUM_2609
SFLE373384 SFV_2065SFV_0143SFV_2063SFV_2064
SFLE198214 AAN43602.1AAN41813.1AAN43600.1AAN43601.1
SERY405948 SACE_1651SACE_5743SACE_1650SACE_1649
SENT454169 SEHA_C2240SEHA_C0243SEHA_C2238SEHA_C2239
SENT321314 SCH_2026SCH_0206SCH_2024SCH_2025
SENT295319 SPA0853SPA0212SPA0855SPA0854
SENT220341 STY2221STY0228STY2219STY2220
SENT209261 T0856T0207T0858T0857
SDYS300267 SDY_2240SDY_0174SDY_2242SDY_2241
SDEG203122 SDE_3204SDE_3205SDE_0630SDE_0631
SCO SCO2173SCO7218SCO1554SCO2177
SBOY300268 SBO_0147SBO_1212SBO_1211
SBAL402882 SHEW185_0979SHEW185_0983SHEW185_0977SHEW185_0978
SBAL399599 SBAL195_1013SBAL195_1017SBAL195_1011SBAL195_1012
SAVE227882 SAV6032SAV6795SAV6026
SARE391037 SARE_3545SARE_4501SARE_3921SARE_3546
RXYL266117 RXYL_0652RXYL_2532RXYL_0647RXYL_0648
RSPH349102 RSPH17025_0481RSPH17025_1056RSPH17025_1055
RSPH349101 RSPH17029_2255RSPH17029_1091RSPH17029_1090
RSPH272943 RSP_0602RSP_2428RSP_2427
RSP357808 ROSERS_0575ROSERS_3091ROSERS_0559ROSERS_4584
RSP101510 RHA1_RO01144RHA1_RO01145RHA1_RO01146
RSOL267608 RSC2391RSC2394RSC2397RSC2396
RRUB269796 RRU_A0670RRU_A0667RRU_A0668
RPOM246200 SPO_0405SPO_1423SPO_1422
RPAL316058 RPB_0740RPB_0166RPB_3282RPB_1259
RPAL316057 RPD_0638RPD_2350RPD_2324RPD_3857
RPAL316056 RPC_3747RPC_3748RPC_1894
RPAL316055 RPE_2234RPE_2229RPE_3848
RPAL258594 RPA0714RPA2094RPA1257
RMET266264 RMET_2779RMET_2782RMET_2785RMET_2784
RLEG216596 RL2832RL2781RL2781A
RFER338969 RFER_2622RFER_2621RFER_2611RFER_2610
REUT381666 H16_A2962H16_A2965H16_A2968H16_A2967
REUT264198 REUT_A0664REUT_A0661REUT_A0658REUT_A0659
RETL347834 RHE_CH02491RHE_CH02443RHE_CH02444
RDEN375451 RD1_1196RD1_1827RD1_1826
RCAS383372 RCAS_0634RCAS_2937RCAS_0647RCAS_0173
PTHE370438 PTH_1311PTH_0931PTH_1313
PSYR223283 PSPTO_1714PSPTO_1715PSPTO_1717
PSYR205918 PSYR_3675PSYR_3674PSYR_3672
PSTU379731 PST_1298PST_0845PST_1299PST_1301
PSP56811 PSYCPRWF_0745PSYCPRWF_0843PSYCPRWF_0844
PSP296591 BPRO_2783BPRO_2782BPRO_0741BPRO_0740
PRUM264731 GFRORF1093GFRORF1094GFRORF1092
PPUT76869 PPUTGB1_1277PPUTGB1_0570PPUTGB1_1278PPUTGB1_1280
PPUT351746 PPUT_4041PPUT_0559PPUT_4040PPUT_4038
PPUT160488 PP_1678PP_0524PP_1679PP_1681
PPRO298386 PBPRB0995PBPRA0536PBPRA1182PBPRA1181
PNAP365044 PNAP_2365PNAP_2364PNAP_0642PNAP_0641
PMEN399739 PMEN_1756PMEN_3846PMEN_1757PMEN_1759
PLUT319225 PLUT_1133PLUT_1148PLUT_1132PLUT_1131
PLUM243265 PLU2986PLU0905PLU2980PLU2985
PHAL326442 PSHAA2997PSHAA2562PSHAA2999PSHAA2998
PGIN242619 PG_0701PG_0702PG_0703
PFLU220664 PFL_4425PFL_5512PFL_4424PFL_4422
PFLU216595 PFLU4484PFLU5464PFLU4483PFLU4481
PFLU205922 PFL_1647PFL_5009PFL_1648PFL_1650
PENT384676 PSEEN1384PSEEN0598PSEEN1385PSEEN1387
PDIS435591 BDI_3957BDI_3956BDI_3955
PCAR338963 PCAR_0487PCAR_0148PCAR_0486PCAR_0485
PATL342610 PATL_1137PATL_1133PATL_1139PATL_1138
PAER208964 PA1278PA4045PA1279PA1281
PAER208963 PA14_47680PA14_11530PA14_47670PA14_47650
PACN267747 PPA0441PPA0076PPA0441PPA0442
OANT439375 OANT_1875OANT_2360OANT_2361
NSP103690 ALL3174ALR3938ALR0379
NARO279238 SARO_0322SARO_0328SARO_0326
MTUB419947 MRA_0263MRA_2223MRA_2224
MTUB336982 TBFG_10257TBFG_12235TBFG_12236
MTHE264732 MOTH_1087MOTH_1721MOTH_1102
MTBRV RV0254CRV2207RV2208
MTBCDC MT0267MT2263MT2264
MSP409 M446_2430M446_4715M446_4382M446_4381
MSP400668 MMWYL1_3675MMWYL1_0251MMWYL1_1409MMWYL1_1410
MSP189918 MKMS_3366MKMS_3367MKMS_3368
MSP164757 MJLS_3315MJLS_3316MJLS_3317
MSP164756 MMCS_3304MMCS_3305MMCS_3306
MSME246196 MSMEG_4274MSMEG_4275MSMEG_4277
MPET420662 MPE_A2308MPE_B0512MPE_A2303MPE_B0520
MLOT266835 MLL1308MLR8228MLR1389MLR1388
MGIL350054 MFLV_0355MFLV_3882MFLV_2942
MFLA265072 MFLA_0113MFLA_0114MFLA_0098MFLA_0099
MEXT419610 MEXT_1447MEXT_2668MEXT_0911MEXT_0910
MCAP243233 MCA_0462MCA_0463MCA_0465
MBOV410289 BCG_0292CBCG_2223BCG_2224
MBOV233413 MB0260CMB2230MB2231
MAVI243243 MAV_2284MAV_2283MAV_2282
MAQU351348 MAQU_0268MAQU_0274MAQU_0270MAQU_0281
MABS561007 MAB_1954CMAB_1953CMAB_1952C
LWEL386043 LWE1105LWE1051LWE1106
LSPH444177 BSPH_2445BSPH_4400BSPH_1664BSPH_2447
LREU557436 LREU_1699LREU_1695LREU_1698
LMON265669 LMOF2365_1154LMOF2365_1090LMOF2365_1155
LMON169963 LMO1147LMO1073LMO1148
LINT267671 LIC_20122LIC_13403LIC_13356LIC_13357
LINT189518 LB152LA4252LA4203LA4204
LINN272626 LIN1111LIN1061LIN1112
LCHO395495 LCHO_2665LCHO_2664LCHO_2660LCHO_2659
LBOR355277 LBJ_4190LBJ_2939LBJ_2826LBJ_2827
LBOR355276 LBL_4205LBL_0124LBL_0245LBL_0244
KPNE272620 GKPORF_B2523GKPORF_B4462GKPORF_B2522GKPORF_B1726
JSP375286 MMA_1097MMA_1100MMA_1087MMA_1088
JSP290400 JANN_0905JANN_3305JANN_3306
HNEP81032 HNE_1521HNE_1510HNE_1511
HMOD498761 HM1_2396HM1_2401HM1_2402
HHAL349124 HHAL_1853HHAL_1923HHAL_1854HHAL_1856
HCHE349521 HCH_00963HCH_06832HCH_00964HCH_00965
HAUR316274 HAUR_1053HAUR_1056HAUR_3263HAUR_4390
HARS204773 HEAR0966HEAR0969HEAR0954HEAR0955
GVIO251221 GLR0747GLL0580GLL3727
GURA351605 GURA_4188GURA_4187GURA_4186
GTHE420246 GTNG_2194GTNG_2199GTNG_1683GTNG_2193
GSUL243231 GSU_3010GSU_3009GSU_3008
GMET269799 GMET_0466GMET_0467GMET_0468
GKAU235909 GK2261GK2266GK1793GK2260
GBET391165 GBCGDNIH1_0656GBCGDNIH1_0669GBCGDNIH1_0670
FSP1855 FRANEAN1_1789FRANEAN1_1785FRANEAN1_1783
FSP106370 FRANCCI3_3129FRANCCI3_3130FRANCCI3_3131
FNUC190304 FN0913FN0885FN0910FN0912
FNOD381764 FNOD_1366FNOD_0257FNOD_1365FNOD_1368
FJOH376686 FJOH_0086FJOH_0087FJOH_0089
FALN326424 FRAAL5138FRAAL5141FRAAL5142
ECOO157 COBUYADTCOBTCOBS
ECOL83334 ECS2788ECS0162ECS2786ECS2787
ECOL585397 ECED1_2329ECED1_0165ECED1_2327ECED1_2328
ECOL585057 ECIAI39_1054ECIAI39_0162ECIAI39_1056ECIAI39_1055
ECOL585056 ECUMN_2329ECUMN_0156ECUMN_2327ECUMN_2328
ECOL585055 EC55989_2227EC55989_0153EC55989_2225EC55989_2226
ECOL585035 ECS88_2058ECS88_0169ECS88_2056ECS88_2057
ECOL585034 ECIAI1_2074ECIAI1_0157ECIAI1_2072ECIAI1_2073
ECOL481805 ECOLC_1635ECOLC_3501ECOLC_1637ECOLC_1636
ECOL469008 ECBD_1656ECBD_3460ECBD_1658ECBD_1657
ECOL439855 ECSMS35_1131ECSMS35_0170ECSMS35_1133ECSMS35_1132
ECOL413997 ECB_01902ECB_00157ECB_01900ECB_01901
ECOL409438 ECSE_2277ECSE_0159ECSE_2275ECSE_2276
ECOL405955 APECO1_1074APECO1_1827APECO1_1072APECO1_1073
ECOL364106 UTI89_C2231UTI89_C0174UTI89_C2229UTI89_C2230
ECOL362663 ECP_1991ECP_0168ECP_1989ECP_1990
ECOL331111 ECE24377A_2275ECE24377A_0163ECE24377A_2273ECE24377A_2274
ECOL316407 ECK1988:JW1971:B1993ECK0157:JW0154:B0158ECK1986:JW1969:B1991ECK1987:JW1970:B1992
ECOL199310 C2479C0194C2477C2478
DVUL882 DVU_1007DVU_3279DVU_0914
DSP255470 CBDBA644CBDBA633CBDBA641CBDBA642
DSP216389 DEHABAV1_0629DEHABAV1_0620DEHABAV1_0626DEHABAV1_0627
DSHI398580 DSHI_2979DSHI_0573DSHI_0788DSHI_0787
DRED349161 DRED_1910DRED_2728DRED_2703
DRAD243230 DR_A0020DR_2588DR_A0240DR_A0239
DPSY177439 DP1953DP2980DP1952DP1951
DOLE96561 DOLE_1229DOLE_2060DOLE_2065DOLE_1230
DHAF138119 DSY2115DSY2084DSY2114DSY2116
DGEO319795 DGEO_2873DGEO_0025DGEO_2872DGEO_2367
DETH243164 DET_0694DET_0684DET_0691DET_0692
DDES207559 DDE_3495DDE_3106DDE_3777DDE_2704
DARO159087 DARO_0147DARO_0138DARO_0148DARO_0149
CVIO243365 CV_0495CV_0496CV_0493CV_0491
CTET212717 CTC_00718CTC_00785CTC_02290CTC_00719
CTEP194439 CT_0945CT_0930CT_0946CT_0948
CSP78 CAUL_2734CAUL_2742CAUL_2743
CSP501479 CSE45_3107CSE45_3108CSE45_3109
CPSY167879 CPS_3657CPS_1163CPS_3659CPS_3658
CPHY357809 CPHY_1106CPHY_0560CPHY_1105
CPER289380 CPR_1109CPR_1115CPR_1108CPR_1110
CPER195103 CPF_1290CPF_1296CPF_1289CPF_1291
CPER195102 CPE1035CPE1041CPE1034CPE1036
CNOV386415 NT01CX_2078NT01CX_2084NT01CX_2077NT01CX_2079
CKLU431943 CKL_0731CKL_2908CKL_3341
CJAP155077 CJA_3770CJA_3767CJA_2896CJA_2897
CHYD246194 CHY_0768CHY_0397CHY_0480CHY_0779
CGLU196627 CG2413CG2318CG2414
CEFF196164 CE2091CE2013CE2092
CDIF272563 CD3438CD3439CD3437
CDES477974 DAUD_1312DAUD_1317DAUD_1314DAUD_1313
CCHL340177 CAG_0846CAG_0726CAG_1058CAG_1057
CBOT536232 CLM_1056CLM_1514CLM_0963
CBOT515621 CLJ_B0958CLJ_B1455CLJ_B0863
CBOT508765 CLL_A2923CLL_A1402CLL_A2928CLL_A2922
CBOT498213 CLD_3649CLD_3216CLD_3751
CBOT441772 CLI_0996CLI_1437CLI_0902
CBOT441771 CLC_0964CLC_1375CLC_0876
CBOT441770 CLB_0950CLB_1365CLB_0862
CBOT36826 CBO0911CBO1337CBO0821
CBEI290402 CBEI_1264CBEI_3702CBEI_1262CBEI_1265
CACE272562 CAC1383CAC1372CAC1384
BVIE269482 BCEP1808_2531BCEP1808_2534BCEP1808_2537BCEP1808_2536
BTHA271848 BTH_I0843BTH_I0840BTH_I0837BTH_I0838
BSUI470137 BSUIS_A1358BSUIS_A0905BSUIS_A0904
BSUI204722 BR_1308BR_0867BR_0866
BSP376 BRADO4911BRADO4918BRADO4916
BSP36773 BCEP18194_A5778BCEP18194_A5781BCEP18194_A5784BCEP18194_A5783
BPSE320373 BURPS668_1038BURPS668_1035BURPS668_1031BURPS668_1032
BPSE320372 BURPS1710B_A1253BURPS1710B_A1250BURPS1710B_A1245BURPS1710B_A1246
BPSE272560 BPSL0986BPSL0983BPSL0979BPSL0980
BOVI236 GBOORF1318GBOORF0890GBOORF0889
BMEL359391 BAB1_1328BAB1_0886BAB1_0885
BMEL224914 BMEI0693BMEI1099BMEI1100
BMAL320389 BMA10247_1629BMA10247_1632BMA10247_1636BMA10247_1635
BMAL320388 BMASAVP1_A2317BMASAVP1_A2320BMASAVP1_A2324BMASAVP1_A2323
BMAL243160 BMA_0696BMA_0693BMA_0688BMA_0689
BJAP224911 BLL3256BLL4160BLR3276BLL3255
BHAL272558 BH1590BH1585BH0284BH1592
BFRA295405 BF2485BF2486BF2487
BFRA272559 BF2518BF2519BF2520
BCEN331272 BCEN2424_2447BCEN2424_2450BCEN2424_2453BCEN2424_2452
BCEN331271 BCEN_1836BCEN_1839BCEN_1842BCEN_1841
BCAN483179 BCAN_A1331BCAN_A0881BCAN_A0880
BAMB398577 BAMMC406_2363BAMMC406_2366BAMMC406_2369BAMMC406_2368
BAMB339670 BAMB_2495BAMB_2498BAMB_2501BAMB_2500
BABO262698 BRUAB1_1309BRUAB1_0879BRUAB1_0878
AVAR240292 AVA_3872AVA_1764AVA_2824
ASP76114 EBA4011EBA3688EBA4008EBA4005
ASP62928 AZO3557AZO3520AZO3560AZO3561
ASP232721 AJS_1098AJS_1099AJS_3176AJS_0678
AORE350688 CLOS_2210CLOS_0915CLOS_2209
AMET293826 AMET_3623AMET_3619AMET_0464AMET_3621
AEHR187272 MLG_2824MLG_2820MLG_2823MLG_2816
ACEL351607 ACEL_0941ACEL_0940ACEL_0939
ACAU438753 AZC_2256AZC_4385AZC_3909AZC_2896
ABOR393595 ABO_2380ABO_2370ABO_2378ABO_0147
AAVE397945 AAVE_1539AAVE_1540AAVE_1553AAVE_0928


Organism features enriched in list (features available for 248 out of the 264 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0008985117
Disease:Dysentery 0.005720666
Endospores:No 2.534e-664211
Endospores:Yes 0.00048473453
GC_Content_Range4:0-40 9.548e-2336213
GC_Content_Range4:60-100 1.075e-18107145
GC_Content_Range7:30-40 3.588e-2221166
GC_Content_Range7:40-50 0.003945238117
GC_Content_Range7:50-60 1.995e-667107
GC_Content_Range7:60-70 1.247e-18101134
Genome_Size_Range5:0-2 2.336e-375155
Genome_Size_Range5:2-4 0.000823667197
Genome_Size_Range5:4-6 1.017e-25136184
Genome_Size_Range5:6-10 4.177e-104047
Genome_Size_Range9:1-2 2.048e-285128
Genome_Size_Range9:2-3 5.624e-728120
Genome_Size_Range9:4-5 2.643e-96796
Genome_Size_Range9:5-6 9.881e-146988
Genome_Size_Range9:6-8 6.051e-103438
Gram_Stain:Gram_Neg 0.0008997159333
Habitat:Host-associated 5.547e-663206
Habitat:Multiple 0.000021098178
Motility:No 0.000037044151
Motility:Yes 5.176e-11152267
Optimal_temp.:25-30 0.00002111719
Pathogenic_in:Human 0.006258878213
Pathogenic_in:No 0.0086187108226
Shape:Coccus 2.578e-11982
Shape:Irregular_coccus 0.0055481217
Shape:Rod 1.327e-18198347
Shape:Sphere 0.0003185119
Shape:Spiral 0.0094894834
Temp._range:Hyperthermophilic 0.0018052323



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 316
Effective number of orgs (counting one per cluster within 468 clusters): 233

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317581
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329531
YPES386656 ncbi Yersinia pestis Pestoides F1
YPES377628 ncbi Yersinia pestis Nepal5161
YPES360102 ncbi Yersinia pestis Antiqua1
YPES349746 ncbi Yersinia pestis Angola1
YPES214092 ncbi Yersinia pestis CO921
YPES187410 ncbi Yersinia pestis KIM 101
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VFIS312309 ncbi Vibrio fischeri ES1141
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPRO399741 ncbi Serratia proteamaculans 5681
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F11
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans1
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97901
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM51
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197071
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
MXAN246197 ncbi Myxococcus xanthus DK 16221
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP266779 ncbi Chelativorans sp. BNC11
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN1
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FMAG334413 ncbi Finegoldia magna ATCC 293280
ESP42895 Enterobacter sp.1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFER585054 ncbi Escherichia fergusonii ATCC 354691
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10431
ECAN269484 ncbi Ehrlichia canis Jake0
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSAL290398 ncbi Chromohalobacter salexigens DSM 30431
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB151
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054761
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUB ncbi Bacillus subtilis subtilis 1681
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BPET94624 Bordetella petrii1
BPER257313 ncbi Bordetella pertussis Tohama I1
BPAR257311 ncbi Bordetella parapertussis 128221
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-11
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K161
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W1
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L1
BCER226900 ncbi Bacillus cereus ATCC 145791
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC360095 ncbi Bartonella bacilliformis KC5831
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor1
BANT260799 ncbi Bacillus anthracis Sterne1
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP11
ASP1667 Arthrobacter sp.0
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4491
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K11
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AHYD196024 Aeromonas hydrophila dhakensis1
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACRY349163 ncbi Acidiphilium cryptum JF-50
ABAU360910 ncbi Bordetella avium 197N1
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG13238   EG12334   EG12151   EG12150   
ZMOB264203
YPSE349747 YPSIP31758_3326
YPSE273123 YPTB0746
YPES386656 YPDSF_2973
YPES377628 YPN_0706
YPES360102 YPA_2884
YPES349746 YPANGOLA_A0990
YPES214092 YPO3385
YPES187410 Y0804
XFAS405440
XFAS183190
XFAS160492
WSUC273121 WS1125
WPIP955
WPIP80849
VFIS312309 VF1222
VEIS391735 VEIS_3080
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TSP28240 TRQ2_0867
TROS309801
TPET390874 TPET_0844
TPEN368408
TPAL243276
TMAR243274 TM_0080
TCRU317025 TCR_0962
TACI273075 TA1079
SWOL335541 SWOL_1405
STOK273063 ST2201
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP387093
SSAP342451 SSP2110
SRUB309807 SRU_1225
SPYO370554
SPYO370553 MGAS2096_SPY1555
SPYO370552 MGAS10270_SPY1596
SPYO370551 MGAS9429_SPY1532
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPRO399741 SPRO_0786
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550 SMAR_0508
SHAE279808 SH2289
SGOR29390
SGLO343509 SG1538
SEPI176280 SE_0383
SEPI176279 SERP0266
SAUR93062 SACOL0665
SAUR93061 SAOUHSC_00613
SAUR426430 NWMN_0581
SAUR418127 SAHV_0607
SAUR367830 SAUSA300_0598
SAUR359787 SAURJH1_0647
SAUR359786 SAURJH9_0632
SAUR282459 SAS0577
SAUR282458 SAR0618
SAUR273036 SAB0562
SAUR196620 MW0573
SAUR158879 SA0566
SAUR158878 SAV0609
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780 SYN_01423
SACI330779 SACI_2323
RTYP257363
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820 PTO0629
PSP312153
PSP117
PPEN278197
PMUL272843
PMOB403833 PMOB_1747
PMAR93060
PMAR59920 PMN2A_0345
PMAR167555 NATL1_10181
PMAR167546
PINT246198
PING357804
PAST100379
PARS340102
PARC259536
PAER178306
OTSU357244
OIHE221109
OCAR504832 OCAR_4888
NWIN323098
NSP387092
NSEN222891
NPHA348780 NP5306A
NOCE323261 NOC_0840
NMUL323848 NMUL_A0090
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
MXAN246197 MXAN_6576
MTHE187420 MTH1112
MSYN262723
MSUC221988
MSTA339860 MSP_1168
MSP266779 MESO_1552
MSED399549 MSED_2093
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_0405
MMAR426368
MMAR402880
MMAR394221
MMAR368407 MEMAR_0601
MMAR267377 MMP0196
MLEP272631 ML0868
MKAN190192
MJAN243232 MJ_1438
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0260
MGEN243273
MFLO265311
MCAP340047
MBAR269797
MART243272
MAEO419665
MACE188937
LXYL281090
LSAK314315
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
KRAD266940 KRAD_3274
ILOI283942
IHOS453591 IGNI_1204
HSOM228400
HSOM205914
HPYL85963
HPYL357544
HPY
HMAR272569 RRNAC3375
HINF71421
HINF374930
HINF281310
HHEP235279
HDUC233412
HBUT415426 HBUT_0171
HACI382638
GOXY290633
GFOR411154
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FRANT
FPHI484022
FMAG334413
ESP42895 ENT638_0698
ERUM302409
ERUM254945
ELIT314225
EFER585054 EFER_0181
EFAE226185 EF_1641
ECHA205920
ECAR218491 ECA3304
ECAN269484
DNOD246195
CVES412965
CTRA471473
CTRA471472
CSUL444179
CSAL290398 CSAL_1492
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMIC443906
CMIC31964
CMAQ397948 CMAQ_0513
CKOR374847
CJEJ407148 C8J_1518
CJEJ360109 JJD26997_1972
CJEJ354242 CJJ81176_1604
CJEJ195099 CJE_1789
CJEJ192222 CJ1617
CJEI306537 JK0711
CHUT269798 CHU_1388
CHOM360107
CFET360106 CFF8240_1763
CFEL264202
CCUR360105 CCV52592_0648
CCON360104
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO CC1309
CABO218497
BXEN266265
BWEI315730 BCERKBAB4_4216
BTUR314724
BTRI382640 BT_1128
BTHU412694 BALH_3955
BTHU281309 BT9727_4102
BTHE226186
BSUB BSU33180
BSP107806
BQUI283165
BPUM315750 BPUM_2981
BPET94624 BPET0492
BPER257313 BP3596
BPAR257311 BPP3985
BLON206672
BLIC279010 BL00715
BHER314723
BHEN283166 BH08100
BGAR290434
BCLA66692 ABC2981
BCIC186490
BCER572264 BCA_4481
BCER405917 BCE_4450
BCER315749
BCER288681 BCE33L4113
BCER226900 BC_4363
BBUR224326
BBRO257310 BB4458
BBAC360095 BARBAKC583_0851
BBAC264462
BAPH372461
BAPH198804
BANT592021 BAA_4617
BANT568206 BAMEG_4634
BANT261594 GBAA4597
BANT260799 BAS4265
BAMY326423 RBAM_030310
BAFZ390236
AYEL322098
AURANTIMONAS
ASP62977 ACIAD0971
ASP1667
ASAL382245 ASA_2655
APLE434271 APJL_1827
APLE416269 APL_1791
APHA212042
APER272557 APE1049
ANAE240017
AMAR234826
ALAI441768
AHYD196024 AHA_1704
AFER243159
ADEH290397 ADEH_3464
ACRY349163
ABAU360910 BAV3068
ABAC204669
AAUR290340
AAEO224324


Organism features enriched in list (features available for 295 out of the 316 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00164215992
Arrangment:Clusters 0.00012971617
Disease:Food_poisoning 0.002045699
Disease:Pharyngitis 0.004098388
Disease:Pneumonia 0.00025171212
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00050691111
Disease:Wide_range_of_infections 0.00050691111
Disease:bronchitis_and_pneumonitis 0.004098388
Disease:meningitis 0.008196577
Endospores:No 5.153e-6132211
Endospores:Yes 0.00456071853
GC_Content_Range4:0-40 3.246e-26168213
GC_Content_Range4:40-60 0.000299094224
GC_Content_Range4:60-100 5.144e-1632145
GC_Content_Range7:30-40 1.190e-23137166
GC_Content_Range7:50-60 9.326e-928107
GC_Content_Range7:60-70 9.671e-1628134
Genome_Size_Range5:0-2 5.256e-34140155
Genome_Size_Range5:4-6 4.793e-1944184
Genome_Size_Range5:6-10 1.462e-11347
Genome_Size_Range9:0-1 5.556e-92727
Genome_Size_Range9:1-2 4.912e-24113128
Genome_Size_Range9:2-3 0.000305977120
Genome_Size_Range9:4-5 2.048e-72696
Genome_Size_Range9:5-6 2.625e-101888
Genome_Size_Range9:6-8 2.738e-11138
Habitat:Aquatic 0.00024313191
Habitat:Host-associated 8.012e-11141206
Habitat:Multiple 0.001104674178
Motility:No 0.000152695151
Motility:Yes 3.643e-1196267
Optimal_temp.:25-30 0.0002253219
Optimal_temp.:30-35 0.008196577
Optimal_temp.:35-37 0.00012471313
Oxygen_Req:Anaerobic 0.003541340102
Pathogenic_in:Animal 0.00444314366
Pathogenic_in:Human 0.0000230131213
Pathogenic_in:No 0.000049192226
Pathogenic_in:Rodent 0.008196577
Shape:Coccus 3.077e-106782
Shape:Rod 3.220e-12135347
Shape:Sphere 0.00032681719



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
P381-PWY (adenosylcobalamin biosynthesis II (late cobalt incorporation))3712600.6803
PWY-5508 (adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II)4082620.6088
PWY-6268 (adenosylcobalamin salvage from cobalamin)3172280.6086
PWY-5507 (adenosylcobalamin biosynthesis I (early cobalt insertion))2992130.5611
PWY-5509 (adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I)3702380.5371
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951580.5279
GLYSYN-THR-PWY (glycine biosynthesis IV)2151610.4776
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001980.4607
P108-PWY (pyruvate fermentation to propionate I)1601280.4476
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652220.4440
PWY-6317 (galactose degradation I (Leloir pathway))4642550.4349
PWY-6269 (adenosylcobalamin salvage from cobinamide II)2671790.4323
PWY0-321 (phenylacetate degradation I (aerobic))1551230.4307
P163-PWY (lysine fermentation to acetate and butyrate)3672200.4257
PWY-5148 (acyl-CoA hydrolysis)2271590.4239
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491180.4178
PWY-5340 (sulfate activation for sulfonation)3852250.4135
P344-PWY (acrylonitrile degradation)2101480.4055
PWY-5938 ((R)-acetoin biosynthesis I)3762200.4029
GALACTCAT-PWY (D-galactonate degradation)104900.4001



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12334   EG12151   EG12150   
EG132380.9992180.9998260.999853
EG123340.9986670.998867
EG121510.999915
EG12150



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PAIRWISE BLAST SCORES:

  EG13238   EG12334   EG12151   EG12150   
EG132380.0f0---
EG12334-0.0f0--
EG12151--0.0f0-
EG12150---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I) (degree of match pw to cand: 0.600, degree of match cand to pw: 0.750, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9989 EG12150 (cobS) COBS-MONOMER (cobalamin 5'-phosphate synthase / cobalamin synthase)
             0.9974 0.9917 G6349 (cobC) RIBAZOLEPHOSPHAT-MONOMER (predicted α-ribazole-5'-P phosphatase)
   *in cand* 0.9997 0.9992 EG13238 (cobU) COBU-MONOMER (CobU)
   *in cand* 0.9996 0.9987 EG12151 (cobT) DMBPPRIBOSYLTRANS-MONOMER (CobT)
             0.9990 0.9982 EG10130 (btuR) COBALADENOSYLTRANS-MONOMER (cobinamide adenosyltransferase / cobalamin adenosyltransferase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9992 0.9987 EG12334 (btuF) EG12334-MONOMER (periplasmic vitamin B12 binding protein)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG12150 EG12151 EG13238 (centered at EG12150)
EG12334 (centered at EG12334)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG13238   EG12334   EG12151   EG12150   
287/623299/623262/623302/623
AAVE397945:0:Tyes6026036160
ABAU360910:0:Tyes-0--
ABOR393595:0:Tyes2274226422720
ABUT367737:0:Tyes10780--
ACAU438753:0:Tyes021571670647
ACEL351607:0:Tyes2-10
ADEH290397:0:Tyes-0--
AEHR187272:0:Tyes8470
AFUL224325:0:Tyes--02019
AHYD196024:0:Tyes-0--
AMAR329726:9:Tyes4000--0
AMET293826:0:Tyes3090308603088
AORE350688:0:Tyes13190-1318
APER272557:0:Tyes-0--
APLE416269:0:Tyes-0--
APLE434271:0:Tno-0--
ASAL382245:5:Tyes-0--
ASP232721:2:Tyes41541624150
ASP62928:0:Tyes3704041
ASP62977:0:Tyes-0--
ASP76114:2:Tyes2020201198
AVAR240292:3:Tyes21130-1062
BABO262698:1:Tno413-10
BAMB339670:3:Tno0365
BAMB398577:3:Tno0365
BAMY326423:0:Tyes-0--
BANT260799:0:Tno-0--
BANT261594:2:Tno-0--
BANT568206:2:Tyes-0--
BANT592021:2:Tno-0--
BBAC360095:0:Tyes--0-
BBRO257310:0:Tyes-0--
BCAN483179:1:Tno446-10
BCEN331271:2:Tno0365
BCEN331272:3:Tyes0365
BCER226900:1:Tyes-0--
BCER288681:0:Tno-0--
BCER405917:1:Tyes-0--
BCER572264:1:Tno-0--
BCLA66692:0:Tyes-0--
BFRA272559:1:Tyes0-12
BFRA295405:0:Tno0-12
BHAL272558:0:Tyes1350134501352
BHEN283166:0:Tyes--0-
BJAP224911:0:Fyes1905210
BLIC279010:0:Tyes-0--
BMAL243160:1:Tno7401
BMAL320388:1:Tno0376
BMAL320389:1:Tyes0376
BMEL224914:1:Tno0-418419
BMEL359391:1:Tno396-10
BOVI236:1:Tyes373-10
BPAR257311:0:Tno-0--
BPER257313:0:Tyes-0--
BPET94624:0:Tyes-0--
BPSE272560:1:Tyes7401
BPSE320372:1:Tno8501
BPSE320373:1:Tno7401
BPUM315750:0:Tyes-0--
BSP36773:2:Tyes0365
BSP376:0:Tyes0-75
BSUB:0:Tyes-0--
BSUI204722:1:Tyes434-10
BSUI470137:1:Tno445-10
BTHA271848:1:Tno6301
BTHU281309:1:Tno-0--
BTHU412694:1:Tno-0--
BTRI382640:1:Tyes--0-
BVIE269482:7:Tyes0365
BWEI315730:4:Tyes-0--
CACE272562:1:Tyes11-012
CAULO:0:Tyes--0-
CBEI290402:0:Tyes2237903
CBOT36826:1:Tno89501-0
CBOT441770:0:Tyes88497-0
CBOT441771:0:Tno85495-0
CBOT441772:1:Tno92532-0
CBOT498213:1:Tno102531-0
CBOT508765:1:Tyes1508015131507
CBOT515621:2:Tyes95583-0
CBOT536232:0:Tno86526-0
CCHL340177:0:Tyes1150329328
CCUR360105:0:Tyes-0--
CDES477974:0:Tyes0521
CDIF272563:1:Tyes1-20
CDIP257309:0:Tyes0-1-
CEFF196164:0:Fyes78079-
CFET360106:0:Tyes-0--
CGLU196627:0:Tyes90091-
CHUT269798:0:Tyes-0--
CHYD246194:0:Tyes366080377
CJAP155077:0:Tyes87086701
CJEI306537:0:Tyes--0-
CJEJ192222:0:Tyes-0--
CJEJ195099:0:Tno-0--
CJEJ354242:2:Tyes-0--
CJEJ360109:0:Tyes-0--
CJEJ407148:0:Tno-0--
CKLU431943:1:Tyes0-21582583
CMAQ397948:0:Tyes---0
CMET456442:0:Tyes-288-0
CNOV386415:0:Tyes1702
CPER195102:1:Tyes1702
CPER195103:0:Tno1702
CPER289380:3:Tyes1702
CPHY357809:0:Tyes5400539-
CPSY167879:0:Tyes2420024222421
CSAL290398:0:Tyes-0--
CSP501479:7:Fyes0-12
CSP78:2:Tyes0-89
CTEP194439:0:Tyes1501618
CTET212717:0:Tyes06314481
CVIO243365:0:Tyes4520
DARO159087:0:Tyes901011
DDES207559:0:Tyes80241010900
DETH243164:0:Tyes10078
DGEO319795:0:Tyes22-230
DGEO319795:1:Tyes-0--
DHAF138119:0:Tyes3103032
DOLE96561:0:Tyes08398441
DPSY177439:2:Tyes2104810
DRAD243230:2:Tyes0-215214
DRAD243230:3:Tyes-0--
DRED349161:0:Tyes0-828803
DSHI398580:5:Tyes24360221220
DSP216389:0:Tyes9067
DSP255470:0:Tno9067
DVUL882:1:Tyes93-23530
ECAR218491:0:Tyes-0--
ECOL199310:0:Tno2226022242225
ECOL316407:0:Tno1842018401841
ECOL331111:6:Tno2022020202021
ECOL362663:0:Tno1816018141815
ECOL364106:1:Tno2053020512052
ECOL405955:2:Tyes1773017711772
ECOL409438:6:Tyes2157021552156
ECOL413997:0:Tno1750017481749
ECOL439855:4:Tno9240926925
ECOL469008:0:Tno0178821
ECOL481805:0:Tno0186921
ECOL585034:0:Tno1900018981899
ECOL585035:0:Tno1826018241825
ECOL585055:0:Tno2064020622063
ECOL585056:2:Tno2181021792180
ECOL585057:0:Tno9030905904
ECOL585397:0:Tno2093020912092
ECOL83334:0:Tno2688026862687
ECOLI:0:Tno1874018721873
ECOO157:0:Tno2714027122713
EFAE226185:3:Tyes-0--
EFER585054:1:Tyes-0--
ESP42895:1:Tyes-0--
FALN326424:0:Tyes0-23
FJOH376686:0:Tyes0-13
FNOD381764:0:Tyes1138011371140
FNUC190304:0:Tyes2802527
FSP106370:0:Tyes0-12
FSP1855:0:Tyes6-20
GBET391165:0:Tyes0-1314
GKAU235909:1:Tyes4764810475
GMET269799:1:Tyes0-12
GSUL243231:0:Tyes2-10
GTHE420246:1:Tyes4965010495
GURA351605:0:Tyes2-10
GVIO251221:0:Tyes1700-3190
HARS204773:0:Tyes101301
HAUR316274:2:Tyes0322213362
HBUT415426:0:Tyes-0--
HCHE349521:0:Tyes0566712
HHAL349124:0:Tyes07113
HMAR272569:8:Tyes-0--
HMOD498761:0:Tyes0-56
HMUK485914:1:Tyes-2668-0
HNEP81032:0:Tyes11-01
HSAL478009:4:Tyes-0-167
HSP64091:2:Tno-0-162
HWAL362976:1:Tyes-222-0
IHOS453591:0:Tyes-0--
JSP290400:1:Tyes0-24292430
JSP375286:0:Tyes101301
KPNE272620:2:Tyes77726677760
KRAD266940:2:Fyes--0-
LBIF355278:2:Tyes--01
LBIF456481:2:Tno--01
LBOR355276:0:Tyes0---
LBOR355276:1:Tyes-0114113
LBOR355277:0:Tno0---
LBOR355277:1:Tno-10501
LCHO395495:0:Tyes6510
LINN272626:1:Tno500-51
LINT189518:0:Tyes0---
LINT189518:1:Tyes-4901
LINT267671:0:Tno0---
LINT267671:1:Tno-4501
LMON169963:0:Tno740-75
LMON265669:0:Tyes640-65
LREU557436:0:Tyes4-03
LSPH444177:1:Tyes73626200738
LWEL386043:0:Tyes540-55
MABS561007:1:Tyes2-10
MAER449447:0:Tyes670--0
MAQU351348:2:Tyes06213
MAVI243243:0:Tyes2-10
MBOV233413:0:Tno0-19891990
MBOV410289:0:Tno0-19441945
MBUR259564:0:Tyes-0-520
MCAP243233:0:Tyes0-13
MEXT419610:0:Tyes555177510
MFLA265072:0:Tyes151601
MGIL350054:3:Tyes035452604-
MHUN323259:0:Tyes-0--
MJAN243232:2:Tyes---0
MLAB410358:0:Tyes-0-69
MLEP272631:0:Tyes--0-
MLOT266835:2:Tyes054806463
MMAG342108:0:Tyes3883-0-
MMAR267377:0:Tyes-0--
MMAR368407:0:Tyes-0--
MMAR444158:0:Tyes0---
MPET420662:0:Tyes-0-8
MPET420662:1:Tyes5-0-
MSED399549:0:Tyes-0--
MSME246196:0:Tyes0-12
MSP164756:1:Tno0-12
MSP164757:0:Tno0-12
MSP189918:2:Tyes0-12
MSP266779:3:Tyes--0-
MSP400668:0:Tyes3465011601161
MSP409:2:Tyes0220418681867
MSTA339860:0:Tyes---0
MTBCDC:0:Tno0-20862087
MTBRV:0:Tno0-19711972
MTHE187420:0:Tyes---0
MTHE264732:0:Tyes0-62215
MTHE349307:0:Tyes-0-666
MTUB336982:0:Tno0-19661967
MTUB419947:0:Tyes0-20272028
MVAN350058:0:Tyes0-3161-
MXAN246197:0:Tyes-0--
NARO279238:0:Tyes0-64
NFAR247156:2:Tyes1-0-
NMUL323848:3:Tyes-0--
NOCE323261:1:Tyes-0--
NPHA348780:2:Tyes---0
NSP103690:6:Tyes28213590-0
NSP35761:1:Tyes0-375-
OANT439375:5:Tyes0-496497
OCAR504832:0:Tyes-0--
PABY272844:0:Tyes-476-0
PACN267747:0:Tyes3600360361
PAER208963:0:Tyes2917029162914
PAER208964:0:Tno0279413
PATL342610:0:Tyes4065
PCAR338963:0:Tyes3490348347
PCRY335284:1:Tyes--01
PDIS435591:0:Tyes2-10
PENT384676:0:Tyes7250726728
PFLU205922:0:Tyes0341013
PFLU216595:1:Tyes394620
PFLU220664:0:Tyes3106420
PFUR186497:0:Tyes-1509-0
PGIN242619:0:Tyes0-12
PHAL326442:1:Tyes4250427426
PHOR70601:0:Tyes-1360-0
PISL384616:0:Tyes-0-1125
PLUM243265:0:Fyes2124021182123
PLUT319225:0:Tyes21710
PMAR146891:0:Tyes705--0
PMAR167539:0:Tyes691--0
PMAR167540:0:Tyes611--0
PMAR167542:0:Tyes664--0
PMAR167555:0:Tyes0---
PMAR59920:0:Tno0---
PMAR74546:0:Tyes678--0
PMAR74547:0:Tyes0--1137
PMEN399739:0:Tyes0211213
PMOB403833:0:Tyes-0--
PNAP365044:8:Tyes1741174010
PPRO298386:1:Tyes0---
PPRO298386:2:Tyes-0646645
PPUT160488:0:Tno1150011511153
PPUT351746:0:Tyes3507035063504
PPUT76869:0:Tno7180719721
PRUM264731:0:Tyes1-20
PSP296591:2:Tyes2034203310
PSP56811:2:Tyes-0100101
PSTU379731:0:Tyes4510452454
PSYR205918:0:Tyes3-20
PSYR223283:2:Tyes0-13
PTHE370438:0:Tyes393-0395
PTOR263820:0:Tyes-0--
RCAS383372:0:Tyes45427194670
RDEN375451:4:Tyes0-601600
RETL347834:5:Tyes48-01
REUT264198:3:Tyes6301
REUT381666:2:Tyes0365
RFER338969:1:Tyes121110
RLEG216596:6:Tyes52-01
RMET266264:2:Tyes0365
RPAL258594:0:Tyes0-1382545
RPAL316055:0:Tyes5-01604
RPAL316056:0:Tyes1859-18610
RPAL316057:0:Tyes0172516993249
RPAL316058:0:Tyes585031421108
RPOM246200:1:Tyes0-996995
RRUB269796:1:Tyes3-01
RSOL267608:1:Tyes0365
RSP101510:3:Fyes0-12
RSP357808:0:Tyes16250403984
RSPH272943:4:Tyes1206-10
RSPH349101:2:Tno1173-10
RSPH349102:5:Tyes0-570569
RXYL266117:0:Tyes5187701
SACI330779:0:Tyes-0--
SACI56780:0:Tyes-0--
SARE391037:0:Tyes09433741
SAUR158878:1:Tno-0--
SAUR158879:1:Tno-0--
SAUR196620:0:Tno-0--
SAUR273036:0:Tno-0--
SAUR282458:0:Tno-0--
SAUR282459:0:Tno-0--
SAUR359786:1:Tno-0--
SAUR359787:1:Tno-0--
SAUR367830:3:Tno-0--
SAUR418127:0:Tyes-0--
SAUR426430:0:Tno-0--
SAUR93061:0:Fno-0--
SAUR93062:1:Tno-0--
SAVE227882:1:Fyes6-7740
SBAL399599:3:Tyes2601
SBAL402882:1:Tno2601
SBOY300268:1:Tyes-0995994
SCO:2:Fyes62257030626
SDEG203122:0:Tyes2607260801
SDEN318161:0:Tyes-1792-0
SDYS300267:1:Tyes1954019561955
SELO269084:0:Tyes0--525
SENT209261:0:Tno6150617616
SENT220341:0:Tno1786017841785
SENT295319:0:Tno6160618617
SENT321314:2:Tno1857018551856
SENT454169:2:Tno1925019231924
SEPI176279:1:Tyes-0--
SEPI176280:0:Tno-0--
SERY405948:0:Tyes2397210
SFLE198214:0:Tyes1841018391840
SFLE373384:0:Tno1812018101811
SFUM335543:0:Tyes2263239602264
SGLO343509:3:Tyes-0--
SHAE279808:0:Tyes-0--
SHAL458817:0:Tyes3064
SHIGELLA:0:Tno-017791780
SLAC55218:1:Fyes0-25892590
SLOI323850:0:Tyes2501
SMAR399550:0:Tyes-0--
SMED366394:3:Tyes152-01
SMEL266834:2:Tyes75-01
SONE211586:1:Tyes2262801
SPEA398579:0:Tno4065
SPRO399741:1:Tyes-0--
SPYO370551:0:Tno-0--
SPYO370552:0:Tno-0--
SPYO370553:0:Tno-0--
SRUB309807:1:Tyes-0--
SSAP342451:2:Tyes-0--
SSED425104:0:Tyes4065
SSOL273057:0:Tyes-0-2874
SSON300269:1:Tyes1787017851786
SSP1131:0:Tyes1095--0
SSP1148:0:Tyes0--144
SSP292414:2:Tyes0-124123
SSP321327:0:Tyes3740-529
SSP321332:0:Tyes0--1794
SSP644076:5:Fyes--10
SSP644076:7:Fyes0---
SSP64471:0:Tyes1013--0
SSP84588:0:Tyes985--0
SSP94122:1:Tyes4065
STHE292459:0:Tyes23-0
STOK273063:0:Tyes-0--
STRO369723:0:Tyes07812391
STYP99287:1:Tyes1794017921793
SWOL335541:0:Tyes--0-
TACI273075:0:Tyes---0
TCRU317025:0:Tyes-0--
TDEN243275:0:Tyes1492134501493
TDEN292415:0:Tyes1612016111609
TDEN326298:0:Tyes16-0
TELO197221:0:Tyes0--235
TERY203124:0:Tyes855--0
TFUS269800:0:Tyes34301578342
TKOD69014:0:Tyes-8-0
TLET416591:0:Tyes1380-
TMAR243274:0:Tyes-0--
TPET390874:0:Tno-0--
TPSE340099:0:Tyes110-0
TSP1755:0:Tyes01591-1
TSP28240:0:Tyes-0--
TTEN273068:0:Tyes90-10
TTHE262724:0:Tyes19-10
TTHE262724:1:Tyes-0--
TTHE300852:1:Tyes20-20
TTHE300852:2:Tyes-0--
TTUR377629:0:Tyes0413
UMET351160:0:Tyes-1461-0
VCHO:0:Tyes2115101
VCHO345073:1:Tno2107801
VEIS391735:1:Tyes-0--
VFIS312309:2:Tyes-0--
VPAR223926:1:Tyes8660864865
VVUL196600:2:Tyes8780876877
VVUL216895:1:Tno2119021212120
WSUC273121:0:Tyes-0--
XAUT78245:1:Tyes462-0951
XAXO190486:0:Tyes3-20
XCAM190485:0:Tyes3-20
XCAM314565:0:Tno0-13
XCAM316273:0:Tno3-20
XCAM487884:0:Tno0-13
XORY291331:0:Tno0-13
XORY342109:0:Tyes0-13
XORY360094:0:Tno6-40
YENT393305:1:Tyes1885018821884
YPES187410:5:Tno-0--
YPES214092:3:Tno-0--
YPES349746:2:Tno-0--
YPES360102:3:Tyes-0--
YPES377628:2:Tno-0--
YPES386656:2:Tno-0--
YPSE273123:2:Tno-0--
YPSE349747:2:Tno-0--



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