CANDIDATE ID: 821

CANDIDATE ID: 821

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9925533e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7686 (aaeA) (b3241)
   Products of gene:
     - G7686-MONOMER (AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System Protein A)
     - CPLX0-4 (AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System)
       Reactions:
        4-hydroxybenzoate[cytosol] + H+[periplasmic space]  ->  4-hydroxybenzoate[periplasmic space] + H+[cytosol]

- G7685 (aaeB) (b3240)
   Products of gene:
     - G7685-MONOMER (AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System Protein B)
     - CPLX0-4 (AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System)
       Reactions:
        4-hydroxybenzoate[cytosol] + H+[periplasmic space]  ->  4-hydroxybenzoate[periplasmic space] + H+[cytosol]

- G6884 (ydhJ) (b1644)
   Products of gene:
     - G6884-MONOMER (conserved protein)

- EG11954 (sdsR) (b4082)
   Products of gene:
     - EG11954-MONOMER (predicted membrane fusion protein of efflux pump)
     - CPLX0-7807 (SdsRQP multidrug efflux pump)
       Reactions:
        multidrug[cytosol] + H+[periplasmic space]  ->  multidrug[extracellular space] + H+[cytosol]



Back to top



ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 145
Effective number of orgs (counting one per cluster within 468 clusters): 87

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM43
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP63
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106333
VFIS312309 ncbi Vibrio fischeri ES1143
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP387093 ncbi Sulfurovum sp. NBC37-13
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB33
SPRO399741 ncbi Serratia proteamaculans 5684
SMED366394 ncbi Sinorhizobium medicae WSM4193
SLOI323850 ncbi Shewanella loihica PV-43
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170293
RSOL267608 ncbi Ralstonia solanacearum GMI10003
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38413
REUT381666 ncbi Ralstonia eutropha H163
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 423
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP296591 ncbi Polaromonas sp. JS6663
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS93
PMEN399739 ncbi Pseudomonas mendocina ymp4
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1253
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NHAM323097 ncbi Nitrobacter hamburgensis X143
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC13
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille3
GOXY290633 ncbi Gluconobacter oxydans 621H4
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL401614 ncbi Francisella novicida U1123
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL351581 Francisella tularensis holarctica FSC2003
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3313
CBUR227377 ncbi Coxiella burnetii RSA 4933
BXEN266265 ncbi Burkholderia xenovorans LB4004
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPAR257311 ncbi Bordetella parapertussis 128223
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP62977 ncbi Acinetobacter sp. ADP14
AHYD196024 Aeromonas hydrophila dhakensis4
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4


Names of the homologs of the genes in the group in each of these orgs
  G7686   G7685   G6884   EG11954   
ZMOB264203 ZMO1430ZMO1432ZMO1430
YPSE349747 YPSIP31758_0420YPSIP31758_0421YPSIP31758_0420YPSIP31758_0535
YPSE273123 YPTB3547YPTB3546YPTB3547YPTB3436
YPES386656 YPDSF_0292YPDSF_0293YPDSF_0292YPDSF_0404
YPES377628 YPN_3487YPN_3486YPN_3487YPN_0482
YPES360102 YPA_3698YPA_3699YPA_3698YPA_3171
YPES349746 YPANGOLA_A1176YPANGOLA_A1175YPANGOLA_A1176YPANGOLA_A1061
YPES214092 YPO3685YPO3686YPO3685YPO0619
YPES187410 Y0178Y0177Y0178Y3558
YENT393305 YE3795YE3794YE2146YE3530
XORY360094 XOOORF_1925XOOORF_2999XOOORF_1925
XORY291331 XOO2780XOO2000XOO2780
XCAM487884 XCC-B100_4383XCC-B100_4385XCC-B100_4383XCC-B100_4383
XCAM316273 XCAORF_4507XCAORF_4509XCAORF_4507XCAORF_4507
XCAM314565 XC_4256XC_4258XC_4256XC_4256
XCAM190485 XCC4169XCC4171XCC4169XCC4169
XAXO190486 XAC4305XAC4307XAC4305XAC4305
XAUT78245 XAUT_4935XAUT_4934XAUT_4935XAUT_4935
VVUL216895 VV2_0170VV1_3195VV1_3195
VPAR223926 VP1359VP1359VPA0097
VFIS312309 VFA0743VFA1152VFA1103
STYP99287 STM3365STM3364STM1442STM1442
SSP387093 SUN_1345SUN_1345SUN_1345
SSON300269 SSO_3383SSO_3382SSO_1512SSO_4263
SSED425104 SSED_1922SSED_0452SSED_4202
SPRO399741 SPRO_4391SPRO_4390SPRO_2212SPRO_2212
SMED366394 SMED_5668SMED_3773SMED_5668
SLOI323850 SHEW_3406SHEW_1543SHEW_0683
SHIGELLA YHCQYHCPS1803YJCR
SFLE373384 SFV_3268SFV_3267SFV_1663SFV_4129
SFLE198214 AAN44745.1AAN44744.1AAN43253.1AAN45564.1
SENT454169 SEHA_C3663SEHA_C3662SEHA_C1612SEHA_C1612
SENT321314 SCH_3303SCH_3302SCH_1461SCH_1461
SENT295319 SPA3232SPA3231SPA1411SPA1411
SENT220341 STY3546STY3545STY1680STY1680
SENT209261 T3280T3279T1310T1310
SDYS300267 SDY_3417SDY_3416SDY_1867SDY_1867
SBOY300268 SBO_1491SBO_3149SBO_1491SBO_4113
SBAL402882 SHEW185_4281SHEW185_4282SHEW185_4281SHEW185_0541
SBAL399599 SBAL195_4421SBAL195_4422SBAL195_4421SBAL195_0565
RSPH349102 RSPH17025_2257RSPH17025_2257RSPH17025_2257
RSPH349101 RSPH17029_0912RSPH17029_0912RSPH17029_3706
RSOL267608 RSC1293RSC2726RSP0440
RRUB269796 RRU_A1954RRU_A1952RRU_A1954RRU_A1954
RPAL316056 RPC_1991RPC_1992RPC_1991RPC_1991
RPAL258594 RPA2709RPA1953RPA1325RPA0515
RMET266264 RMET_4791RMET_4793RMET_4791RMET_4510
RLEG216596 RL4180RL2871PRL90059
REUT381666 H16_B1273H16_B1273H16_A2416
REUT264198 REUT_B4082REUT_B4083REUT_B4082REUT_B4352
RETL347834 RHE_PB00008RHE_CH01192RHE_PB00008
PSYR223283 PSPTO_3620PSPTO_3618PSPTO_1220PSPTO_3703
PSYR205918 PSYR_3380PSYR_3378PSYR_1048PSYR_1772
PSTU379731 PST_2122PST_2120PST_2122PST_2122
PSP296591 BPRO_3235BPRO_3235BPRO_3235
PPUT76869 PPUTGB1_4265PPUTGB1_4267PPUTGB1_4265PPUTGB1_0754
PPUT351746 PPUT_1186PPUT_1184PPUT_1186PPUT_1186
PPUT160488 PP_1152PP_1150PP_1152PP_1152
PPRO298386 PBPRA1560PBPRA1560PBPRB1792
PMEN399739 PMEN_1492PMEN_1490PMEN_1492PMEN_1492
PHAL326442 PSHAA1078PSHAA1079PSHAA1078
PFLU220664 PFL_4602PFL_1705PFL_1006PFL_4602
PFLU216595 PFLU0139PFLU0137PFLU0139PFLU0130
PFLU205922 PFL_0173PFL_0171PFL_0941PFL_2138
PENT384676 PSEEN1300PSEEN1298PSEEN1300PSEEN4553
PCAR338963 PCAR_2909PCAR_2911PCAR_2909PCAR_2909
PAER208964 PA3304PA3305PA3892PA3304
PAER208963 PA14_21290PA14_21280PA14_13560PA14_21290
OCAR504832 OCAR_4318OCAR_4316OCAR_4318OCAR_4318
OANT439375 OANT_3003OANT_3001OANT_3003OANT_4226
NHAM323097 NHAM_0616NHAM_2977NHAM_3279
MSP409 M446_4866M446_4864M446_4866M446_6591
MSP400668 MMWYL1_1291MMWYL1_1292MMWYL1_1291MMWYL1_1291
MSP266779 MESO_1920MESO_1920MESO_1920
MLOT266835 MLR4818MLR0902MLR8231MLR8231
MFLA265072 MFLA_2585MFLA_2583MFLA_2585MFLA_2585
KPNE272620 GKPORF_B2988GKPORF_B2987GKPORF_B1081GKPORF_B2650
JSP375286 MMA_1931MMA_1933MMA_1931
GOXY290633 GOX2113GOX1765GOX2113GOX2082
GBET391165 GBCGDNIH1_2131GBCGDNIH1_2133GBCGDNIH1_2131GBCGDNIH1_2131
FTUL418136 FTW_0655FTW_0655FTW_0687
FTUL401614 FTN_0718FTN_0718FTN_1276
FTUL393115 FTF0747CFTF0747CFTF1257
FTUL351581 FTL_1365FTL_1366FTL_0687
FRANT FT.0748CFT.0748CEMRA1
FPHI484022 FPHI_1605FPHI_1604FPHI_1605FPHI_1408
ESP42895 ENT638_3678ENT638_3677ENT638_1803ENT638_1803
EFER585054 EFER_3219EFER_3218EFER_1399EFER_4289
ECOO157 YHCQYHCPZ2659YJCR
ECOL83334 ECS4114ECS4113ECS2353ECS5064
ECOL585397 ECED1_3891ECED1_3890ECED1_1845ECED1_4816
ECOL585057 ECIAI39_3732ECIAI39_3731ECIAI39_1411ECIAI39_4505
ECOL585056 ECUMN_3715ECUMN_3714ECUMN_1935ECUMN_4619
ECOL585055 EC55989_3654EC55989_3653EC55989_1812EC55989_4578
ECOL585035 ECS88_3617ECS88_3616ECS88_1692ECS88_4581
ECOL585034 ECIAI1_3383ECIAI1_3382ECIAI1_1696ECIAI1_4317
ECOL481805 ECOLC_0465ECOLC_0466ECOLC_1985ECOLC_3945
ECOL469008 ECBD_0505ECBD_0506ECBD_1999ECBD_3949
ECOL439855 ECSMS35_3537ECSMS35_3536ECSMS35_1554ECSMS35_4546
ECOL413997 ECB_03101ECB_03100ECB_01614ECB_03954
ECOL409438 ECSE_3520ECSE_3519ECSE_1767ECSE_4379
ECOL405955 APECO1_3203APECO1_3204APECO1_726APECO1_2369
ECOL364106 UTI89_C3672UTI89_C3671UTI89_C1835UTI89_C4677
ECOL362663 ECP_3325ECP_3324ECP_1590ECP_4323
ECOL331111 ECE24377A_3724ECE24377A_3723ECE24377A_1855ECE24377A_4639
ECOL316407 ECK3230:JW3210:B3241ECK3229:JW3209:B3240ECK1640:JW1636:B1644ECK4075:JW4043:B4082
ECOL199310 C3996C3995C2036C5087
ECAR218491 ECA0278ECA0279ECA0278ECA0278
CVIO243365 CV_2847CV_2845CV_2847CV_2847
CSAL290398 CSAL_0215CSAL_2682CSAL_2681CSAL_0552
CBUR434922 COXBU7E912_0866COXBU7E912_0866COXBU7E912_0866
CBUR360115 COXBURSA331_A1150COXBURSA331_A1150COXBURSA331_A1150
CBUR227377 CBU_0798CBU_0798CBU_0798
BXEN266265 BXE_B2614BXE_B2612BXE_B2614BXE_B2119
BVIE269482 BCEP1808_1408BCEP1808_5467BCEP1808_1408BCEP1808_4148
BTHA271848 BTH_I2628BTH_I2626BTH_I2628BTH_I2560
BSUI470137 BSUIS_B0750BSUIS_B0752BSUIS_B0750BSUIS_A1104
BSUI204722 BR_A0758BR_A0760BR_A0758BR_1060
BSP376 BRADO4671BRADO4671BRADO4671
BSP36773 BCEP18194_A4591BCEP18194_C7722BCEP18194_A4591BCEP18194_C6554
BPSE320373 BURPS668_1675BURPS668_1677BURPS668_1675BURPS668_1624
BPSE320372 BURPS1710B_A2011BURPS1710B_A2013BURPS1710B_A2011BURPS1710B_A1961
BPSE272560 BPSL1975BPSL1973BPSL1975BPSL2020
BPET94624 BPET2608BPET2606BPET1203BPET2608
BPAR257311 BPP1645BPP1645BPP1645
BOVI236 GBOORFA0777GBOORFA0777GBOORFA0119
BMEL359391 BAB2_0481BAB2_0479BAB2_0481BAB2_0481
BMEL224914 BMEII0533BMEII0531BMEII0533BMEII1118
BMAL320389 BMA10247_0746BMA10247_0748BMA10247_0746BMA10247_0690
BMAL320388 BMASAVP1_A1465BMASAVP1_A1467BMASAVP1_A1465BMASAVP1_A1408
BMAL243160 BMA_0932BMA_0934BMA_0932BMA_0883
BJAP224911 BLR3853BLR3852BLR0261BLR7593
BCEN331272 BCEN2424_1446BCEN2424_4581BCEN2424_1446BCEN2424_4720
BCEN331271 BCEN_0964BCEN_3787BCEN_0964BCEN_3647
BCAN483179 BCAN_B0767BCAN_B0769BCAN_B0767BCAN_A1075
BBRO257310 BB3083BB3081BB3083BB3083
BAMB398577 BAMMC406_1367BAMMC406_5771BAMMC406_1367BAMMC406_4577
BAMB339670 BAMB_1328BAMB_6015BAMB_1328BAMB_4112
BABO262698 BRUAB2_0474BRUAB2_0472BRUAB2_0474BRUAB2_0474
ASP62977 ACIAD0351ACIAD0349ACIAD0351ACIAD0351
AHYD196024 AHA_3758AHA_3757AHA_3758AHA_3758
ADEH290397 ADEH_1574ADEH_1574ADEH_1574
ACAU438753 AZC_1077AZC_1076AZC_1357AZC_1077
ABOR393595 ABO_1136ABO_0015ABO_1136ABO_0017
ABAU360910 BAV2024BAV2022BAV2024BAV1010


Organism features enriched in list (features available for 135 out of the 145 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00174561192
Arrangment:Pairs 0.008260035112
Arrangment:Singles 0.002027980286
Disease:Brucellosis 0.000628455
Disease:Bubonic_plague 0.000141366
Disease:Dysentery 0.000141366
Disease:Gastroenteritis 0.0004103913
Disease:Opportunistic_infections 0.000628455
Endospores:No 2.433e-823211
Endospores:Yes 7.273e-6153
GC_Content_Range4:0-40 1.031e-226213
GC_Content_Range4:40-60 0.000024872224
GC_Content_Range4:60-100 1.699e-757145
GC_Content_Range7:30-40 2.918e-156166
GC_Content_Range7:50-60 1.698e-848107
GC_Content_Range7:60-70 1.545e-856134
Genome_Size_Range5:0-2 9.671e-155155
Genome_Size_Range5:2-4 5.843e-821197
Genome_Size_Range5:4-6 2.730e-1581184
Genome_Size_Range5:6-10 1.706e-82847
Genome_Size_Range9:1-2 4.466e-115128
Genome_Size_Range9:2-3 1.158e-78120
Genome_Size_Range9:4-5 0.00001303996
Genome_Size_Range9:5-6 1.966e-84288
Genome_Size_Range9:6-8 6.204e-92538
Gram_Stain:Gram_Neg 8.387e-26126333
Habitat:Aquatic 0.00460331291
Habitat:Multiple 2.840e-663178
Habitat:Specialized 0.0048123553
Motility:No 9.823e-813151
Motility:Yes 3.585e-787267
Optimal_temp.:25-30 2.599e-61419
Oxygen_Req:Anaerobic 7.603e-112102
Oxygen_Req:Facultative 9.802e-770201
Pathogenic_in:Animal 0.00077242666
Pathogenic_in:Human 0.001000464213
Pathogenic_in:No 0.000071034226
Pathogenic_in:Plant 0.0017418915
Shape:Coccobacillus 0.0038048711
Shape:Coccus 1.829e-6482
Shape:Rod 1.538e-15118347
Shape:Spiral 0.0010537134
Temp._range:Mesophilic 0.0000659124473



Back to top



ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 442
Effective number of orgs (counting one per cluster within 468 clusters): 353

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
VCHO345073 ncbi Vibrio cholerae O3950
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169610
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B1
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63011
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO11
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197071
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534421
NMEN272831 ncbi Neisseria meningitidis FAM181
NMEN122587 ncbi Neisseria meningitidis Z24911
NMEN122586 ncbi Neisseria meningitidis MC581
NGON242231 ncbi Neisseria gonorrhoeae FA 10901
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23961
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-001
FTUL393011 ncbi Francisella tularensis holarctica OSU181
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25941
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB1
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CAULO ncbi Caulobacter crescentus CB151
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUB ncbi Bacillus subtilis subtilis 1680
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse1
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-11
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5831
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62928 ncbi Azoarcus sp. BH720
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232701
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7686   G7685   G6884   EG11954   
XFAS405440
XFAS183190
XFAS160492
WSUC273121
WPIP955
WPIP80849
VEIS391735
VCHO345073
VCHO
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025 TCR_1531
TACI273075
SWOL335541
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP644076 SCH4B_3704
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SLAC55218
SHAE279808
SGOR29390
SGLO343509
SFUM335543 SFUM_0764
SERY405948
SEPI176280
SEPI176279
SELO269084 SYC1736_C
SDEN318161
SDEG203122
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RXYL266117
RTYP257363
RSP357808
RSP101510
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316057
RMAS416276
RFEL315456
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSP312153
PSP117
PRUM264731
PPEN278197
PNAP365044
PMUL272843
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225 PLUT_0055
PLUM243265 PLU1276
PISL384616
PINT246198
PING357804
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PCRY335284 PCRYO_1008
PAST100379
PARS340102
PARC259536 PSYC_1357
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109
NWIN323098
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NOCE323261 NOC_1129
NMUL323848
NMEN374833 NMCC_1826
NMEN272831 NMC1853
NMEN122587 NMA2169
NMEN122586 NMB_0318
NGON242231 NGO1683
NFAR247156
NEUT335283
NEUR228410
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPNE297246 LPP0015
LPNE297245 LPL0015
LPNE272624 LPG0015
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
KRAD266940
JSP290400
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HHEP235279
HHAL349124
HDUC233412
HCHE349521 HCH_06942
HBUT415426
HAUR316274
HARS204773
HACI382638
GVIO251221
GTHE420246
GKAU235909
GFOR411154
FTUL458234 FTA_0726
FTUL393011 FTH_0689
FSUC59374
FSP1855
FSP106370
FNUC190304
FNOD381764
FMAG334413
FJOH376686 FJOH_4903
FALN326424
ERUM302409
ERUM254945
ELIT314225 ELI_15015
EFAE226185
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DRED349161
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DGEO319795
DETH243164
DDES207559
DARO159087 DARO_3829
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439 CT_0105
CSUL444179
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_0645
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHYD246194 CHY_1863
CHUT269798 CHU_0942
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402 CBEI_4100
CAULO CC3714
CACE272562
CABO218497
BWEI315730
BTUR314724
BTHU412694
BTHU281309
BTHE226186
BSUB
BSP107806
BQUI283165 BQ10020
BPUM315750
BLON206672
BLIC279010
BHER314723
BHEN283166 BH12700
BHAL272558
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264
BCER405917
BCER315749
BCER288681
BCER226900
BBUR224326
BBAC360095 BARBAKC583_1088
BBAC264462
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114
ASP62928
ASP1667
APLE434271
APLE416269
APHA212042
APER272557
AORE350688
ANAE240017
AMET293826
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159 AFE_2771
AEHR187272
ACRY349163 ACRY_1890
ACEL351607
ABUT367737
ABAC204669
AAVE397945
AAUR290340
AAEO224324


Organism features enriched in list (features available for 415 out of the 442 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00020037992
Arrangment:Clusters 0.00280861717
Disease:Gastroenteritis 0.0003521313
Endospores:No 2.380e-10182211
Endospores:Yes 1.311e-75253
GC_Content_Range4:0-40 3.468e-24201213
GC_Content_Range4:40-60 0.0000516139224
GC_Content_Range4:60-100 1.238e-974145
GC_Content_Range7:0-30 5.169e-84747
GC_Content_Range7:30-40 3.247e-15154166
GC_Content_Range7:50-60 8.367e-853107
GC_Content_Range7:60-70 3.069e-1164134
Genome_Size_Range5:0-2 4.915e-17147155
Genome_Size_Range5:2-4 3.935e-10171197
Genome_Size_Range5:4-6 1.190e-2379184
Genome_Size_Range5:6-10 7.636e-71847
Genome_Size_Range9:0-1 0.00008022727
Genome_Size_Range9:1-2 1.913e-12120128
Genome_Size_Range9:2-3 1.308e-9110120
Genome_Size_Range9:4-5 2.310e-84596
Genome_Size_Range9:5-6 2.945e-123488
Genome_Size_Range9:6-8 1.553e-71238
Gram_Stain:Gram_Neg 1.233e-36174333
Gram_Stain:Gram_Pos 3.776e-27150150
Habitat:Multiple 1.765e-6103178
Habitat:Specialized 0.00311634653
Motility:No 3.160e-11137151
Motility:Yes 5.669e-12153267
Optimal_temp.:25-30 1.329e-9119
Optimal_temp.:30-37 0.00197491818
Oxygen_Req:Anaerobic 4.457e-1298102
Oxygen_Req:Facultative 1.890e-8114201
Pathogenic_in:No 0.0007228177226
Pathogenic_in:Plant 0.0082962615
Shape:Coccus 4.673e-87782
Shape:Irregular_coccus 0.00280861717
Shape:Rod 3.696e-21199347
Shape:Spiral 0.00068433234
Temp._range:Hyperthermophilic 0.00033572323
Temp._range:Mesophilic 0.0000230320473
Temp._range:Thermophilic 4.414e-63535



Back to top



ORGANISMS ENRICHED FOR GROUP:




Back to top



ORGANISMS DEPLETED FOR GROUP:




Back to top



PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112890.6225
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491010.5906
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951170.5866
GLYCOCAT-PWY (glycogen degradation I)2461320.5808
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96770.5750
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001420.5487
GALACTITOLCAT-PWY (galactitol degradation)73630.5434
PWY-5918 (heme biosynthesis I)2721340.5414
PWY0-981 (taurine degradation IV)106780.5391
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901380.5369
PWY-4041 (γ-glutamyl cycle)2791350.5352
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911380.5350
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961390.5333
AST-PWY (arginine degradation II (AST pathway))120830.5304
TYRFUMCAT-PWY (tyrosine degradation I)1841060.5260
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861350.5216
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181160.5197
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761020.5150
PWY-1269 (CMP-KDO biosynthesis I)3251430.5122
GALACTCAT-PWY (D-galactonate degradation)104740.5072
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251160.5032
PWY0-1182 (trehalose degradation II (trehalase))70580.5016
PWY-5148 (acyl-CoA hydrolysis)2271160.4986
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)156930.4970
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391430.4889
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911030.4823
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491200.4811
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491200.4811
PWY-3162 (tryptophan degradation V (side chain pathway))94670.4788
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135830.4755
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138840.4746
PWY-5028 (histidine degradation II)130810.4743
P601-PWY (D-camphor degradation)95670.4743
PWY-1501 (mandelate degradation I)73570.4725
PWY-5913 (TCA cycle variation IV)3011320.4708
GLUCONSUPER-PWY (D-gluconate degradation)2291130.4703
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481420.4667
GLUTAMINDEG-PWY (glutamine degradation I)1911010.4658
GLUCARDEG-PWY (D-glucarate degradation I)152870.4566
PWY-46 (putrescine biosynthesis III)138820.4563
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))183970.4537
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291360.4522
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001290.4499
KDOSYN-PWY (KDO transfer to lipid IVA I)180940.4367
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))191970.4329
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)179930.4309
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551150.4299
PWY-6087 (4-chlorocatechol degradation)2231060.4286
P344-PWY (acrylonitrile degradation)2101020.4269
PWY-2361 (3-oxoadipate degradation)82570.4260
GALACTARDEG-PWY (D-galactarate degradation I)151830.4242
4-HYDROXYMANDELATE-DEGRADATION-PWY (4-hydroxymandelate degradation)102650.4235
LIPASYN-PWY (phospholipases)2121020.4221
THREONINE-DEG2-PWY (threonine degradation II)2141020.4175
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135760.4110
PWY-5386 (methylglyoxal degradation I)3051250.4104
REDCITCYC (TCA cycle variation II)174880.4022



Back to top



PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7685   G6884   EG11954   
G76860.9995560.999560.999342
G76850.9991830.998726
G68840.999165
EG11954



Back to top



PAIRWISE BLAST SCORES:

  G7686   G7685   G6884   EG11954   
G76860.0f0-7.2e-481.2e-12
G7685-0.0f0--
G68842.8e-46-0.0f07.6e-21
EG119541.1e-22-6.7e-320.0f0



Back to top



PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-4 (AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9994 0.9987 G7685 (aaeB) G7685-MONOMER (AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System Protein B)
   *in cand* 0.9996 0.9993 G7686 (aaeA) G7686-MONOMER (AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport System Protein A)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9987 EG11954 (sdsR) EG11954-MONOMER (predicted membrane fusion protein of efflux pump)
   *in cand* 0.9995 0.9992 G6884 (ydhJ) G6884-MONOMER (conserved protein)



Back to top



GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7685 G7686 (centered at G7686)
EG11954 (centered at EG11954)
G6884 (centered at G6884)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7686   G7685   G6884   EG11954   
181/623118/623170/623185/623
ABAU360910:0:Tyes1011100910110
ABOR393595:0:Tyes1142011422
ACAU438753:0:Tyes102821
ACRY349163:8:Tyes0---
ADEH290397:0:Tyes0-00
AFER243159:0:Tyes---0
AHYD196024:0:Tyes1011
ASAL382245:5:Tyes--00
ASP232721:2:Tyes1650-0-
ASP62977:0:Tyes2022
BABO262698:0:Tno2022
BAMB339670:1:Tno-0--
BAMB339670:2:Tno---0
BAMB339670:3:Tno0-0-
BAMB398577:1:Tno-0--
BAMB398577:2:Tno---0
BAMB398577:3:Tno0-0-
BBAC360095:0:Tyes---0
BBRO257310:0:Tyes2022
BCAN483179:0:Tno020-
BCAN483179:1:Tno---0
BCEN331271:1:Tno-140-0
BCEN331271:2:Tno0-0-
BCEN331272:2:Tyes-0-139
BCEN331272:3:Tyes0-0-
BHEN283166:0:Tyes---0
BJAP224911:0:Fyes3616361407382
BMAL243160:1:Tno4749470
BMAL320388:1:Tno5759570
BMAL320389:1:Tyes5658560
BMEL224914:0:Tno202592
BMEL359391:0:Tno2022
BOVI236:0:Tyes499-4990
BPAR257311:0:Tno0-00
BPER257313:0:Tyes---0
BPET94624:0:Tyes1409140701409
BPSE272560:1:Tyes20247
BPSE320372:1:Tno5052500
BPSE320373:1:Tno5153510
BQUI283165:0:Tyes---0
BSP36773:0:Tyes-1163-0
BSP36773:2:Tyes0-0-
BSP376:0:Tyes0-00
BSUI204722:0:Tyes020-
BSUI204722:1:Tyes---0
BSUI470137:0:Tno020-
BSUI470137:1:Tno---0
BTHA271848:1:Tno6664660
BTRI382640:1:Tyes0--0
BVIE269482:5:Tyes-0--
BVIE269482:6:Tyes---0
BVIE269482:7:Tyes0-0-
BXEN266265:1:Tyes020491
CAULO:0:Tyes---0
CBEI290402:0:Tyes0---
CBUR227377:1:Tyes0-00
CBUR360115:1:Tno0-00
CBUR434922:2:Tno0-00
CHUT269798:0:Tyes0---
CHYD246194:0:Tyes--0-
CKLU431943:1:Tyes0---
CPSY167879:0:Tyes0--0
CSAL290398:0:Tyes025182517348
CSP501479:4:Fyes--00
CSP78:2:Tyes0--2409
CTEP194439:0:Tyes0---
CVIO243365:0:Tyes2022
DARO159087:0:Tyes--0-
DSHI398580:5:Tyes0--0
ECAR218491:0:Tyes0100
ECOL199310:0:Tno1931193003007
ECOL316407:0:Tno1585158402417
ECOL331111:6:Tno1796179502672
ECOL362663:0:Tno1742174102725
ECOL364106:1:Tno1834183302823
ECOL405955:2:Tyes1732173102598
ECOL409438:6:Tyes1789178802683
ECOL413997:0:Tno1507150602382
ECOL439855:4:Tno1927192602890
ECOL469008:0:Tno0115033432
ECOL481805:0:Tno0115293488
ECOL585034:0:Tno1670166902559
ECOL585035:0:Tno1868186702786
ECOL585055:0:Tno1817181602720
ECOL585056:2:Tno1787178602683
ECOL585057:0:Tno2317231603091
ECOL585397:0:Tno2010200902914
ECOL83334:0:Tno1806180502794
ECOLI:0:Tno1627162602480
ECOO157:0:Tno1777177602725
EFER585054:1:Tyes1824182302856
ELIT314225:0:Tyes---0
ESP42895:1:Tyes1885188400
FJOH376686:0:Tyes0---
FPHI484022:1:Tyes2012002010
FRANT:0:Tno0-0468
FTUL351581:0:Tno581-5820
FTUL393011:0:Tno---0
FTUL393115:0:Tyes0-0465
FTUL401614:0:Tyes0-0554
FTUL418136:0:Tno0-024
FTUL458234:0:Tno---0
GBET391165:0:Tyes0200
GMET269799:1:Tyes-698-0
GOXY290633:5:Tyes3480348317
GSUL243231:0:Tyes0--0
GURA351605:0:Tyes379--0
HCHE349521:0:Tyes--0-
HINF281310:0:Tyes0-0-
HINF374930:0:Tyes0-0-
HINF71421:0:Tno0-0-
ILOI283942:0:Tyes-2330-0
JSP375286:0:Tyes020-
KPNE272620:2:Tyes1869186801536
LPNE272624:0:Tno0---
LPNE297245:1:Fno0---
LPNE297246:1:Fyes0---
LPNE400673:0:Tno0-2567-
MEXT419610:0:Tyes0-0-
MFLA265072:0:Tyes2022
MLOT266835:2:Tyes3031058105810
MMAG342108:0:Tyes--02122
MPET420662:1:Tyes0-0-
MSP266779:3:Tyes0-00
MSP400668:0:Tyes0100
MSP409:2:Tyes2021681
NARO279238:0:Tyes0--0
NGON242231:0:Tyes---0
NHAM323097:2:Tyes0-22702546
NMEN122586:0:Tno---0
NMEN122587:0:Tyes---0
NMEN272831:0:Tno---0
NMEN374833:0:Tno---0
NOCE323261:1:Tyes--0-
OANT439375:4:Tyes2021217
OCAR504832:0:Tyes2022
PAER208963:0:Tyes6236220623
PAER208964:0:Tno015890
PARC259536:0:Tyes---0
PATL342610:0:Tyes--29090
PCAR338963:0:Tyes0200
PCRY335284:1:Tyes---0
PENT384676:0:Tyes2023072
PFLU205922:0:Tyes207801997
PFLU216595:1:Tyes9790
PFLU220664:0:Tyes354369203543
PHAL326442:1:Tyes010-
PLUM243265:0:Fyes--0-
PLUT319225:0:Tyes0---
PMEN399739:0:Tyes2022
PPRO298386:1:Tyes---0
PPRO298386:2:Tyes0-0-
PPUT160488:0:Tno2022
PPUT351746:0:Tyes2022
PPUT76869:0:Tno3546354835460
PSP296591:2:Tyes0-00
PSP56811:2:Tyes0--0
PSTU379731:0:Tyes2022
PSYR205918:0:Tyes233823360730
PSYR223283:2:Tyes2370236802451
RDEN375451:4:Tyes0--0
RETL347834:0:Tyes0--0
RETL347834:5:Tyes--0-
REUT264198:2:Tyes010266
REUT381666:1:Tyes0-0-
REUT381666:2:Tyes---0
RFER338969:1:Tyes0-2246-
RLEG216596:2:Tyes---0
RLEG216596:6:Tyes1308-0-
RMET266264:1:Tyes2782802780
RPAL258594:0:Tyes220414428150
RPAL316055:0:Tyes0--1887
RPAL316056:0:Tyes0100
RPAL316058:0:Tyes--01790
RRUB269796:1:Tyes2022
RSOL267608:0:Tyes---0
RSOL267608:1:Tyes0-1458-
RSPH272943:4:Tyes0-0-
RSPH349101:1:Tno---0
RSPH349101:2:Tno0-0-
RSPH349102:5:Tyes0-00
SALA317655:1:Tyes1042--0
SBAL399599:3:Tyes3946394739460
SBAL402882:1:Tno3797379837970
SBOY300268:1:Tyes0157002484
SDYS300267:1:Tyes1457145600
SELO269084:0:Tyes--0-
SENT209261:0:Tno1881188000
SENT220341:0:Tno1693169200
SENT295319:0:Tno1758175700
SENT321314:2:Tno1871187000
SENT454169:2:Tno1973197200
SFLE198214:0:Tyes1540153902394
SFLE373384:0:Tno1525152402340
SFUM335543:0:Tyes--0-
SHAL458817:0:Tyes0--0
SHIGELLA:0:Tno1462146101566
SLOI323850:0:Tyes2801-8880
SMED366394:1:Tyes0--0
SMED366394:2:Tyes--0-
SMEL266834:1:Tyes0--0
SONE211586:1:Tyes--0555
SPEA398579:0:Tno1283--0
SPRO399741:1:Tyes2201220000
SSED425104:0:Tyes1510-03863
SSON300269:1:Tyes1783178202603
SSP387093:0:Tyes0-00
SSP644076:3:Fyes---0
SSP94122:1:Tyes--0699
STYP99287:1:Tyes1911191000
TCRU317025:0:Tyes0---
VFIS312309:1:Tyes0-409360
VPAR223926:0:Tyes---0
VPAR223926:1:Tyes0-0-
VVUL196600:1:Tyes--00
VVUL216895:0:Tno0---
VVUL216895:1:Tno--00
XAUT78245:0:Tyes1011
XAXO190486:0:Tyes0200
XCAM190485:0:Tyes0200
XCAM314565:0:Tno0200
XCAM316273:0:Tno0200
XCAM487884:0:Tno0200
XORY291331:0:Tno795-0795
XORY342109:0:Tyes0--0
XORY360094:0:Tno0-20870
YENT393305:1:Tyes1615161401350
YPES187410:5:Tno1013420
YPES214092:3:Tno2940294129400
YPES349746:2:Tno1131121130
YPES360102:3:Tyes5385395380
YPES377628:2:Tno3064306330640
YPES386656:2:Tno010109
YPSE273123:2:Tno1061051060
YPSE349747:2:Tno010115
ZMOB264203:0:Tyes020-



Back to top