CANDIDATE ID: 846

CANDIDATE ID: 846

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9930183e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG12040 (yejE) (b2179)
   Products of gene:
     - YEJE-MONOMER (YejE)
     - ABC-41-CPLX (YejA/YejB/YejE/YejF ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- EG12038 (yejB) (b2178)
   Products of gene:
     - YEJB-MONOMER (YejB)
     - ABC-41-CPLX (YejA/YejB/YejE/YejF ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- EG12037 (yejA) (b2177)
   Products of gene:
     - YEJA-MONOMER (YejA)
     - ABC-41-CPLX (YejA/YejB/YejE/YejF ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- EG11528 (fabI) (b1288)
   Products of gene:
     - ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
       Reactions:
        an enoylglutaryl-[acp] methyl ester + NADPH + H+  ->  a glutaryl-[acp] methyl ester + NADP+
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        an enoylpimeloyl-[acp] methyl ester + NADPH + H+  ->  a pimeloyl-[acp] methyl ester + NADP+
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        a trans-delta3-cis-delta7-tetradecenoyl-[acp] + NADPH + H+  ->  a cis-delta7-tetradecenoyl-[acp] + NADP+
         In pathways
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-6285 (PWY-6285)
         PWY-6282 (palmitoleate biosynthesis I)
        a trans-delta3-cis-delta9-hexadecenoyl-[acp] + NADPH + H+  ->  a palmitoleoyl-[acp] + NADP+
         In pathways
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-6285 (PWY-6285)
         PWY-6282 (palmitoleate biosynthesis I)
        a trans-delta3-cis-delta5-dodecenoyl-[acp] + NADPH + H+  ->  NADP+ + a cis-delta5-dodecenoyl-[acp]
         In pathways
         PWY-6285 (PWY-6285)
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         PWY0-862 (cis-dodecenoyl biosynthesis)
        NADPH + a trans-delta2-enoyl-acyl-[acp]  ->  a 2,3,4-saturated fatty acyl-[acp] + NADP+
         In pathways
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-ELONG-PWY (fatty acid elongation -- saturated)
        a trans-delta2-enoyl-acyl-[acp] + NADH + H+  ->  a 2,3,4-saturated fatty acyl-[acp] + NAD+
         In pathways
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-ELONG-PWY (fatty acid elongation -- saturated)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 244
Effective number of orgs (counting one per cluster within 468 clusters): 166

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317583
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329533
YPES386656 ncbi Yersinia pestis Pestoides F3
YPES377628 ncbi Yersinia pestis Nepal5163
YPES360102 ncbi Yersinia pestis Antiqua3
YPES349746 ncbi Yersinia pestis Angola3
YPES214092 ncbi Yersinia pestis CO923
YPES187410 ncbi Yersinia pestis KIM 103
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80813
XAUT78245 ncbi Xanthobacter autotrophicus Py24
WSUC273121 ncbi Wolinella succinogenes DSM 17404
VVUL216895 ncbi Vibrio vulnificus CMCP63
VVUL196600 ncbi Vibrio vulnificus YJ0163
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106333
VFIS312309 ncbi Vibrio fischeri ES1143
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3953
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169613
TSP28240 Thermotoga sp.3
TROS309801 ncbi Thermomicrobium roseum DSM 51593
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332233
TMAR243274 ncbi Thermotoga maritima MSB83
TLET416591 ncbi Thermotoga lettingae TMO3
TELO197221 ncbi Thermosynechococcus elongatus BP-13
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STRO369723 ncbi Salinispora tropica CNB-4403
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP644076 Silicibacter sp. TrichCH4B4
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSP292414 ncbi Ruegeria sp. TM10404
SSP1148 ncbi Synechocystis sp. PCC 68033
SSON300269 ncbi Shigella sonnei Ss0464
SPRO399741 ncbi Serratia proteamaculans 5683
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB3
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SBOY300268 ncbi Shigella boydii Sb2274
SAUR93062 ncbi Staphylococcus aureus aureus COL3
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83253
SAUR426430 ncbi Staphylococcus aureus aureus Newman3
SAUR418127 ncbi Staphylococcus aureus aureus Mu33
SAUR367830 Staphylococcus aureus aureus USA3003
SAUR359787 ncbi Staphylococcus aureus aureus JH13
SAUR359786 ncbi Staphylococcus aureus aureus JH93
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4763
SAUR196620 ncbi Staphylococcus aureus aureus MW23
SAUR158879 ncbi Staphylococcus aureus aureus N3153
SAUR158878 ncbi Staphylococcus aureus aureus Mu503
SARE391037 ncbi Salinispora arenicola CNS-2053
SACI56780 ncbi Syntrophus aciditrophicus SB3
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-13
PPUT351746 ncbi Pseudomonas putida F13
PPUT160488 ncbi Pseudomonas putida KT24403
PPRO298386 ncbi Photobacterium profundum SS93
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO13
PING357804 ncbi Psychromonas ingrahamii 373
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW253
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L483
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP387092 ncbi Nitratiruptor sp. SB155-23
NSP103690 ncbi Nostoc sp. PCC 71203
NOCE323261 ncbi Nitrosococcus oceani ATCC 197073
NHAM323097 ncbi Nitrobacter hamburgensis X144
MSP409 Methylobacterium sp.4
MSP266779 ncbi Chelativorans sp. BNC14
MMAR394221 ncbi Maricaulis maris MCS103
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT3
MEXT419610 ncbi Methylobacterium extorquens PA14
MAQU351348 ncbi Marinobacter aquaeolei VT84
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-004
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1303
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566013
LCHO395495 ncbi Leptothrix cholodnii SP-64
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1973
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5503
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)3
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)3
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS14
HSOM228400 ncbi Haemophilus somnus 23363
HPYL85963 ncbi Helicobacter pylori J994
HPYL357544 ncbi Helicobacter pylori HPAG14
HPY ncbi Helicobacter pylori 266954
HNEP81032 Hyphomonas neptunium3
HHEP235279 ncbi Helicobacter hepaticus ATCC 514494
HHAL349124 ncbi Halorhodospira halophila SL14
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
HARS204773 ncbi Herminiimonas arsenicoxydans4
HACI382638 ncbi Helicobacter acinonychis Sheeba3
GVIO251221 ncbi Gloeobacter violaceus PCC 74213
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-23
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GMET269799 ncbi Geobacter metallireducens GS-154
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S853
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a3
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough4
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DOLE96561 ncbi Desulfococcus oleovorans Hxd33
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30433
CJAP155077 Cellvibrio japonicus3
CCHL340177 ncbi Chlorobium chlorochromatii CaD33
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6573
CBOT498213 ncbi Clostridium botulinum B1 str. Okra3
CBOT441772 ncbi Clostridium botulinum F str. Langeland3
CBOT441771 ncbi Clostridium botulinum A str. Hall3
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193973
CBOT36826 Clostridium botulinum A3
BXEN266265 ncbi Burkholderia xenovorans LB4003
BWEI315730 ncbi Bacillus weihenstephanensis KBAB43
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHU412694 ncbi Bacillus thuringiensis Al Hakam3
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1683
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BPUM315750 ncbi Bacillus pumilus SAFR-0323
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii3
BPER257313 ncbi Bordetella pertussis Tohama I3
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-14
BHAL272558 ncbi Bacillus halodurans C-1253
BCLA66692 ncbi Bacillus clausii KSM-K164
BCER572264 ncbi Bacillus cereus 03BB1023
BCER405917 Bacillus cereus W3
BCER315749 ncbi Bacillus cytotoxicus NVH 391-983
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145793
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1003
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-63
BAMB339670 ncbi Burkholderia ambifaria AMMD3
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP62977 ncbi Acinetobacter sp. ADP14
ASP232721 ncbi Acidovorax sp. JS424
AORE350688 ncbi Alkaliphilus oremlandii OhILAs3
AMET293826 ncbi Alkaliphilus metalliredigens QYMF3
AMAR329726 ncbi Acaryochloris marina MBIC110173
AHYD196024 Aeromonas hydrophila dhakensis3
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABUT367737 ncbi Arcobacter butzleri RM40183
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N3
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  EG12040   EG12038   EG12037   EG11528   
YPSE349747 YPSIP31758_2713YPSIP31758_2712YPSIP31758_2711
YPSE273123 YPTB1305YPTB1306YPTB1307
YPES386656 YPDSF_2423YPDSF_2422YPDSF_2421
YPES377628 YPN_2705YPN_2704YPN_2703
YPES360102 YPA_0989YPA_0990YPA_0991
YPES349746 YPANGOLA_A1495YPANGOLA_A1496YPANGOLA_A1497
YPES214092 YPO1271YPO1272YPO1273
YPES187410 Y2912Y2911Y2910
YENT393305 YE1428YE1429YE1430
XAUT78245 XAUT_2635XAUT_2634XAUT_2633XAUT_4143
WSUC273121 WS0569WS0568WS0567WS0423
VVUL216895 VV1_2975VV1_0841VV2_1291
VVUL196600 VV1307VV0251VVA0132
VPAR223926 VP0171VP0170VP0172
VFIS312309 VF0689VF0688VF0690
VEIS391735 VEIS_3812VEIS_3813VEIS_3814VEIS_3815
VCHO345073 VC0395_0533VC0395_0534VC0395_0535
VCHO VCA0589VCA0590VCA0591
TSP28240 TRQ2_0508TRQ2_0405TRQ2_1592
TROS309801 TRD_0396TRD_A0700TRD_1628
TPSE340099 TETH39_1687TETH39_0201TETH39_0202
TMAR243274 TM_1065TM_0532TM_1226
TLET416591 TLET_1529TLET_1687TLET_2026
TELO197221 TLR1151TLR1261TLL1693
STYP99287 STM2218STM2217STM2216STM1700
STRO369723 STROP_1670STROP_1669STROP_3024
STHE292459 STH2743STH145STH144STH2927
SSP644076 SCH4B_2726SCH4B_2727SCH4B_2728SCH4B_4621
SSP321332 CYB_1186CYB_0850CYB_1160
SSP321327 CYA_0051CYA_2362CYA_1682
SSP292414 TM1040_2550TM1040_2551TM1040_2552TM1040_1147
SSP1148 SLL0833SLL0312SLR1051
SSON300269 SSO_2235SSO_2234SSO_2233SSO_1852
SPRO399741 SPRO_3248SPRO_3247SPRO_3246
SMEL266834 SMC02830SMC02831SMC02832SMC00005
SMED366394 SMED_3364SMED_3365SMED_3366SMED_3448
SLAC55218 SL1157_1519SL1157_1518SL1157_1517SL1157_2772
SHIGELLA YEJEYEJBYEJAFABI
SGLO343509 SG0949SG0950SG0951SG1513
SFUM335543 SFUM_1414SFUM_1413SFUM_1411
SFLE373384 SFV_2257SFV_2256SFV_2255SFV_1302
SFLE198214 AAN43785.1AAN43784.1AAN43783.1AAN42904.1
SENT454169 SEHA_C2455SEHA_C2454SEHA_C2453SEHA_C1885
SENT321314 SCH_2234SCH_2233SCH_2232SCH_1694
SENT295319 SPA0633SPA0634SPA0635SPA1177
SENT220341 STY2454STY2453STY2452STY1352
SENT209261 T0637T0638T0639T1613
SDYS300267 SDY_0900SDY_0901SDY_0902SDY_1368
SBOY300268 SBO_2145SBO_2146SBO_2147SBO_1774
SAUR93062 SACOL0992SACOL0999SACOL1016
SAUR93061 SAOUHSC_00924SAOUHSC_00931SAOUHSC_00947
SAUR426430 NWMN_0857NWMN_0864NWMN_0881
SAUR418127 SAHV_0982SAHV_0989SAHV_1005
SAUR367830 SAUSA300_0888SAUSA300_0895SAUSA300_0912
SAUR359787 SAURJH1_1005SAURJH1_1012SAURJH1_1028
SAUR359786 SAURJH9_0986SAURJH9_0993SAURJH9_1009
SAUR282459 SAS0857SAS0864SAS0880
SAUR196620 MW0869MW0876MW0892
SAUR158879 SA0846SA0853SA0869
SAUR158878 SAV0987SAV0994SAV1011
SARE391037 SARE_0256SARE_1661SARE_3250
SACI56780 SYN_01342SYN_01341SYN_00608
RSPH349102 RSPH17025_0528RSPH17025_0527RSPH17025_0526RSPH17025_1051
RSPH349101 RSPH17029_2357RSPH17029_2358RSPH17029_2359RSPH17029_1019
RSPH272943 RSP_0702RSP_0703RSP_0704RSP_2344
RSOL267608 RSC1175RSC1174RSC1173RSC1172
RRUB269796 RRU_A3168RRU_A3167RRU_A3166RRU_A2624
RPOM246200 SPO_3535SPO_3536SPO_3537SPO_2142
RPAL316058 RPB_1773RPB_1772RPB_1770RPB_1211
RPAL316057 RPD_3532RPD_3533RPD_3535RPD_1312
RPAL316056 RPC_3726RPC_3727RPC_3729RPC_0347
RPAL316055 RPE_3764RPE_3765RPE_3767RPE_4591
RPAL258594 RPA3689RPA3690RPA3692RPA1199
RMET266264 RMET_2144RMET_2145RMET_2146RMET_2147
RLEG216596 RL0187RL0186RL0185RL1011
RFER338969 RFER_2130RFER_2129RFER_2128RFER_2127
REUT381666 H16_A2407H16_A2408H16_A2409H16_A2410
REUT264198 REUT_A2127REUT_A2128REUT_A2129REUT_A2130
RETL347834 RHE_CH00177RHE_CH00176RHE_CH00175RHE_CH00109
RDEN375451 RD1_1265RD1_1264RD1_1263RD1_3199
PSYR223283 PSPTO_3719PSPTO_3718PSPTO_3717PSPTO_3721
PSYR205918 PSYR_1756PSYR_1757PSYR_1758PSYR_1754
PSTU379731 PST_2260PST_2259PST_2258PST_2262
PSP56811 PSYCPRWF_1409PSYCPRWF_1410PSYCPRWF_1412PSYCPRWF_0956
PSP312153 PNUC_1235PNUC_1236PNUC_1237PNUC_1238
PSP296591 BPRO_2422BPRO_2421BPRO_2420BPRO_2419
PPUT76869 PPUTGB1_3721PPUTGB1_3720PPUTGB1_3719
PPUT351746 PPUT_1716PPUT_1717PPUT_1718
PPUT160488 PP_4149PP_4148PP_4147
PPRO298386 PBPRA2937PBPRA2938PBPRA2936
PNAP365044 PNAP_2015PNAP_2016PNAP_2017PNAP_2018
PMEN399739 PMEN_2058PMEN_2059PMEN_2060PMEN_2056
PLUM243265 PLU2491PLU0301PLU2592
PING357804 PING_0291PING_0290PING_0289
PFLU220664 PFL_3304PFL_3303PFL_3301PFL_3306
PFLU216595 PFLU2637PFLU2638PFLU2640
PFLU205922 PFL_3118PFL_2180PFL_2181PFL_2177
PENT384676 PSEEN3567PSEEN3566PSEEN3565
PCRY335284 PCRYO_1430PCRYO_1431PCRYO_1433PCRYO_1424
PCAR338963 PCAR_1867PCAR_1869PCAR_1870PCAR_2044
PARC259536 PSYC_1040PSYC_1039PSYC_1037PSYC_1045
PAER208964 PA1808PA1809PA1810PA1806
PAER208963 PA14_41150PA14_41140PA14_41130PA14_41170
OCAR504832 OCAR_7429OCAR_7430OCAR_7432OCAR_6903
OANT439375 OANT_0012OANT_0013OANT_0015OANT_0741
NWIN323098 NWI_0291NWI_0290NWI_0288NWI_0032
NSP387092 NIS_1486NIS_1607NIS_1489
NSP103690 ALL2011ALR4583ALL4391
NOCE323261 NOC_2772NOC_2771NOC_1769
NHAM323097 NHAM_0381NHAM_0380NHAM_0378NHAM_0040
MSP409 M446_4411M446_1614M446_1616M446_2227
MSP266779 MESO_4081MESO_4082MESO_4084MESO_0727
MMAR394221 MMAR10_0862MMAR10_0861MMAR10_3058
MMAG342108 AMB4387AMB4388AMB4389AMB1591
MLOT266835 MLL5492MLL5491MLL5494MLR7458
MFLA265072 MFLA_1541MFLA_1542MFLA_1539
MEXT419610 MEXT_2515MEXT_0344MEXT_0342MEXT_0426
MAQU351348 MAQU_1540MAQU_1539MAQU_1538MAQU_1542
LSPH444177 BSPH_1478BSPH_2220BSPH_4232BSPH_1902
LINT363253 LI0250LI0251LI0169LI0350
LINT267671 LIC_13383LIC_13382LIC_11013
LINT189518 LA4228LA4227LA3083
LCHO395495 LCHO_1273LCHO_1274LCHO_1277LCHO_1698
LBOR355277 LBJ_2906LBJ_2905LBJ_0843
LBOR355276 LBL_0157LBL_0158LBL_2239
LBIF456481 LEPBI_I0327LEPBI_I0326LEPBI_I2322
LBIF355278 LBF_0318LBF_0317LBF_2256
KPNE272620 GKPORF_B1903GKPORF_B1902GKPORF_B1901GKPORF_B0307
JSP375286 MMA_1206MMA_1205MMA_1204MMA_1203
JSP290400 JANN_3861JANN_3862JANN_3863JANN_2476
HSOM228400 HSM_0694HSM_0695HSM_1002
HPYL85963 JHP0236JHP1172JHP1173JHP0181
HPYL357544 HPAG1_0254HPAG1_1194HPAG1_1195HPAG1_0189
HPY HP0251HP1251HP1252HP0195
HNEP81032 HNE_2880HNE_2879HNE_3436
HHEP235279 HH_1785HH_1784HH_0473HH_1313
HHAL349124 HHAL_0595HHAL_0596HHAL_0597HHAL_0598
HCHE349521 HCH_02520HCH_02521HCH_02522HCH_02517
HAUR316274 HAUR_1225HAUR_1224HAUR_4683HAUR_3260
HARS204773 HEAR2324HEAR2325HEAR2326HEAR2327
HACI382638 HAC_0241HAC_0233HAC_0380
GVIO251221 GLL4124GLL4125GLR4188
GURA351605 GURA_2052GURA_2050GURA_2049GURA_0906
GTHE420246 GTNG_0693GTNG_1998GTNG_0714
GSUL243231 GSU_1435GSU_1434GSU_1433GSU_1008
GMET269799 GMET_1236GMET_1235GMET_1234GMET_2558
GBET391165 GBCGDNIH1_1988GBCGDNIH1_1989GBCGDNIH1_1990GBCGDNIH1_0225
FSUC59374 FSU0512FSU0250FSU2542
ESP42895 ENT638_2775ENT638_2774ENT638_2773ENT638_2178
EFER585054 EFER_2269EFER_2268EFER_2267EFER_1665
ECOO157 YEJEYEJBYEJAFABI
ECOL83334 ECS3071ECS3070ECS3069ECS1861
ECOL585397 ECED1_2630ECED1_2629ECED1_1499
ECOL585057 ECIAI39_2320ECIAI39_2319ECIAI39_2318ECIAI39_1630
ECOL585056 ECUMN_2516ECUMN_2515ECUMN_2514ECUMN_1592
ECOL585055 EC55989_2433EC55989_2432EC55989_2431EC55989_1450
ECOL585035 ECS88_2328ECS88_2327ECS88_2326ECS88_1430
ECOL585034 ECIAI1_2261ECIAI1_2260ECIAI1_2259ECIAI1_1313
ECOL481805 ECOLC_1468ECOLC_1469ECOLC_1470ECOLC_2337
ECOL469008 ECBD_1478ECBD_1479ECBD_1480ECBD_2329
ECOL439855 ECSMS35_2328ECSMS35_2327ECSMS35_2326ECSMS35_1839
ECOL413997 ECB_02109ECB_02108ECB_02107ECB_01265
ECOL409438 ECSE_2448ECSE_2447ECSE_2446ECSE_1340
ECOL405955 APECO1_4375APECO1_4376APECO1_4377APECO1_447
ECOL364106 UTI89_C2456UTI89_C2455UTI89_C2454UTI89_C1561
ECOL362663 ECP_2220ECP_2219ECP_2218ECP_1342
ECOL331111 ECE24377A_2477ECE24377A_2476ECE24377A_2475ECE24377A_1494
ECOL316407 ECK2173:JW2167:B2179ECK2172:JW2166:B2178ECK2171:JW2165:B2177ECK1283:JW1281:B1288
ECOL199310 C2716C2715C2714C1759
ECAR218491 ECA2738ECA2737ECA2736ECA1972
DVUL882 DVU_2386DVU_2385DVU_2384DVU_0794
DSHI398580 DSHI_0657DSHI_0656DSHI_0655DSHI_1790
DOLE96561 DOLE_0943DOLE_0944DOLE_0942
DDES207559 DDE_0450DDE_0449DDE_0448DDE_1006
CSP501479 CSE45_4021CSE45_4020CSE45_4019CSE45_1781
CSAL290398 CSAL_1948CSAL_1947CSAL_1946
CJAP155077 CJA_2251CJA_2252CJA_2249
CCHL340177 CAG_1157CAG_1766CAG_0404
CBOT536232 CLM_1381CLM_1382CLM_1530
CBOT515621 CLJ_B1266CLJ_B1267CLJ_B1473
CBOT498213 CLD_1388CLD_3342CLD_3182
CBOT441772 CLI_1310CLI_1311CLI_1453
CBOT441771 CLC_1266CLC_1267CLC_1391
CBOT441770 CLB_1254CLB_1255CLB_1381
CBOT36826 CBO1225CBO1226CBO1355
BXEN266265 BXE_B0755BXE_B1565BXE_C0050
BWEI315730 BCERKBAB4_0805BCERKBAB4_0209BCERKBAB4_1126
BVIE269482 BCEP1808_4954BCEP1808_4953BCEP1808_1968BCEP1808_6177
BTHU412694 BALH_0818BALH_0220BALH_1080
BTHU281309 BT9727_0824BT9727_4233BT9727_4231BT9727_1119
BTHA271848 BTH_I1980BTH_I1979BTH_I1978BTH_I1977
BSUI470137 BSUIS_A0007BSUIS_A0008BSUIS_A0010BSUIS_A2008
BSUI204722 BR_0007BR_0008BR_0010BR_2171
BSUB BSU12940BSU11390BSU11720
BSP376 BRADO1005BRADO1004BRADO1002BRADO2151
BSP36773 BCEP18194_A5369BCEP18194_A5000BCEP18194_A5371BCEP18194_B2636
BPUM315750 BPUM_1186BPUM_1185BPUM_1101
BPSE320373 BURPS668_2491BURPS668_2492BURPS668_2493BURPS668_2494
BPSE320372 BURPS1710B_A2860BURPS1710B_A2861BURPS1710B_A2862BURPS1710B_A2863
BPSE272560 BPSL2201BPSL2202BPSL2203BPSL2204
BPET94624 BPET2850BPET1583BPET0628
BPER257313 BP1824BP0284BP3215
BPAR257311 BPP1445BPP2882BPP0424BPP3838
BOVI236 GBOORF0007GBOORF0008GBOORF0010GBOORF2163
BMEL359391 BAB1_0007BAB1_0008BAB1_0010BAB1_2172
BMEL224914 BMEI1937BMEI1936BMEI1934BMEI1958
BMAL320389 BMA10247_1380BMA10247_1381BMA10247_1382BMA10247_1384
BMAL320388 BMASAVP1_A2107BMASAVP1_A2108BMASAVP1_A2109BMASAVP1_A2111
BMAL243160 BMA_1605BMA_1606BMA_1607BMA_1608
BLIC279010 BL03320BL03319BL03318BL05113
BJAP224911 BLR1427BLR1426BLR1424BLR2629
BHEN283166 BH02390BH02380BH08740BH04310
BHAL272558 BH0349BH0348BH2843
BCLA66692 ABC3091ABC0777ABC1605ABC2517
BCER572264 BCA_0957BCA_0270BCA_1261
BCER405917 BCE_1002BCE_0249BCE_1339
BCER315749 BCER98_0220BCER98_0219BCER98_0920
BCER288681 BCE33L0809BCE33L4245BCE33L4243BCE33L1113
BCER226900 BC_0909BC_0242BC_1216
BCEN331272 BCEN2424_2060BCEN2424_1709BCEN2424_2062BCEN2424_4869
BCEN331271 BCEN_6017BCEN_6369BCEN_6015BCEN_3497
BCAN483179 BCAN_A0007BCAN_A0008BCAN_A0010BCAN_A2213
BBRO257310 BB2519BB3203BB0426BB4282
BBAC264462 BD0360BD0358BD0357
BANT592021 BAA_1013BAA_4748BAA_4746BAA_1308
BANT568206 BAMEG_3652BAMEG_4767BAMEG_4765BAMEG_3358
BANT261594 GBAA0910GBAA4732GBAA4729GBAA1232
BANT260799 BAS0860BAS4392BAS4390BAS1139
BAMY326423 RBAM_011400RBAM_011390RBAM_011380RBAM_011730
BAMB398577 BAMMC406_1962BAMMC406_1963BAMMC406_1964
BAMB339670 BAMB_2092BAMB_2093BAMB_2094
BABO262698 BRUAB1_0007BRUAB1_0008BRUAB1_0010BRUAB1_2144
ASP62977 ACIAD1141ACIAD1140ACIAD1139ACIAD3116
ASP232721 AJS_1812AJS_1811AJS_1810AJS_1809
AORE350688 CLOS_1343CLOS_1342CLOS_1209
AMET293826 AMET_2913AMET_2914AMET_2915
AMAR329726 AM1_2080AM1_2084AM1_3154
AHYD196024 AHA_3431AHA_3432AHA_2859
AEHR187272 MLG_2270MLG_2271MLG_2274MLG_2277
ACAU438753 AZC_0132AZC_0133AZC_0135AZC_1754
ABUT367737 ABU_0216ABU_0096ABU_2135
ABOR393595 ABO_1217ABO_1218ABO_1219ABO_1215
ABAU360910 BAV1646BAV2195BAV2938
AAVE397945 AAVE_3252AAVE_3253AAVE_3254AAVE_3255


Organism features enriched in list (features available for 226 out of the 244 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.002283156112
Disease:Botulism 0.008517755
Disease:Brucellosis 0.008517755
Disease:Bubonic_plague 0.003256866
Disease:Dysentery 0.003256866
Disease:Gastroenteritis 0.00466571013
Disease:Opportunistic_infections 0.008517755
Endospores:No 2.986e-754211
GC_Content_Range4:0-40 9.268e-1147213
GC_Content_Range4:40-60 0.0033039101224
GC_Content_Range4:60-100 0.000021477145
GC_Content_Range7:0-30 0.0001580747
GC_Content_Range7:30-40 1.415e-640166
GC_Content_Range7:50-60 5.889e-764107
GC_Content_Range7:60-70 2.918e-777134
Genome_Size_Range5:0-2 7.502e-279155
Genome_Size_Range5:2-4 0.002512062197
Genome_Size_Range5:4-6 2.231e-20122184
Genome_Size_Range5:6-10 4.154e-63347
Genome_Size_Range9:1-2 1.066e-199128
Genome_Size_Range9:2-3 1.722e-625120
Genome_Size_Range9:4-5 2.522e-126896
Genome_Size_Range9:5-6 1.874e-65488
Genome_Size_Range9:6-8 1.086e-62938
Gram_Stain:Gram_Neg 7.316e-10164333
Gram_Stain:Gram_Pos 0.000063039150
Habitat:Host-associated 0.000765963206
Habitat:Multiple 0.000044590178
Habitat:Terrestrial 0.00509821931
Motility:No 5.677e-734151
Motility:Yes 8.071e-11141267
Optimal_temp.:25-30 0.00579261319
Optimal_temp.:28-30 0.001241777
Oxygen_Req:Anaerobic 0.000070223102
Oxygen_Req:Facultative 0.000222797201
Pathogenic_in:Animal 0.00469203566
Shape:Coccus 0.00010001782
Shape:Rod 8.404e-11171347
Shape:Sphere 0.0055930219
Temp._range:Hyperthermophilic 0.0010852223
Temp._range:Mesophilic 0.0002227199473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 326
Effective number of orgs (counting one per cluster within 468 clusters): 255

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM41
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79011
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252591
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-30
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-10
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-401
SCO ncbi Streptomyces coelicolor A3(2)1
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 230
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT31
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534421
NMEN272831 ncbi Neisseria meningitidis FAM181
NMEN122587 ncbi Neisseria meningitidis Z24911
NMEN122586 ncbi Neisseria meningitidis MC581
NGON242231 ncbi Neisseria gonorrhoeae FA 10901
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C911
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MXAN246197 ncbi Myxococcus xanthus DK 16221
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP400668 ncbi Marinomonas sp. MWYL11
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath1
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HDUC233412 ncbi Haemophilus ducreyi 35000HP1
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
GOXY290633 ncbi Gluconobacter oxydans 621H1
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-001
FTUL418136 ncbi Francisella tularensis tularensis WY96-34181
FTUL401614 ncbi Francisella novicida U1121
FTUL393115 ncbi Francisella tularensis tularensis FSC1981
FTUL393011 ncbi Francisella tularensis holarctica OSU181
FTUL351581 Francisella tularensis holarctica FSC2001
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S41
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ELIT314225 ncbi Erythrobacter litoralis HTCC25941
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DRED349161 ncbi Desulfotomaculum reducens MI-11
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DARO159087 ncbi Dechloromonas aromatica RCB1
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E880
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)1
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.921
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN1
CBLO203907 ncbi Candidatus Blochmannia floridanus1
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CAULO ncbi Caulobacter crescentus CB151
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/31
BTUR314724 ncbi Borrelia turicatae 91E1351
BTRI382640 ncbi Bartonella tribocorum CIP 1054761
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BQUI283165 ncbi Bartonella quintana Toulouse1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola1
BBUR224326 ncbi Borrelia burgdorferi B311
BBAC360095 ncbi Bartonella bacilliformis KC5831
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62928 ncbi Azoarcus sp. BH721
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232701
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  EG12040   EG12038   EG12037   EG11528   
ZMOB264203 ZMO1692
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WPIP955 WD_0085
WPIP80849 WB_0711
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629 TERTU_2102
TPEN368408
TPAL243276
TKOD69014
TFUS269800 TFU_1842
TDEN292415 TBD_1672
TCRU317025 TCR_1181
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP94122
SSP84588 SYNW0225OR1262
SSP64471 GSYN0274
SSP387093 SUN_0717
SSP1131 SYNCC9605_0219
SSOL273057
SSED425104
SSAP342451 SSP1774
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579
SONE211586
SMUT210007
SMAR399550
SLOI323850
SHAL458817
SHAE279808 SH1947
SGOR29390
SEPI176280 SE_0712
SEPI176279 SERP0601
SDEN318161
SDEG203122 SDE_2030
SCO SCO1814
SBAL402882
SBAL399599
SAVE227882 SAV6463
SAUR282458 SAR0978
SALA317655 SALA_0657
SAGA211110
SAGA208435
SAGA205921
SACI330779
RTYP257363 RT0353
RSP101510 RHA1_RO04335
RSAL288705
RRIC452659 RRIOWA_0588
RRIC392021 A1G_02800
RPRO272947 RP365
RMAS416276 RMA_0512
RFEL315456 RF_0575
RCON272944 RC0494
RCAN293613 A1E_03635
RBEL391896 A1I_01015
RBEL336407 RBE_1255
RALB246199
RAKA293614 A1C_02720
PTOR263820
PTHE370438
PSP117 RB10790
PRUM264731
PMAR93060 P9215_03071
PMAR74547 PMT1881
PMAR74546 PMT9312_0284
PMAR59920 PMN2A_1648
PMAR167555 NATL1_03621
PMAR167546 P9301ORF_0311
PMAR167542 P9515ORF_0328
PMAR167540 PMM0282
PMAR167539 PRO_0314
PMAR146891 A9601_03051
PISL384616
PINT246198
PHOR70601 PH0807
PHAL326442
PGIN242619
PFUR186497
PDIS435591
PATL342610
PAST100379
PARS340102
PAER178306
PACN267747
OTSU357244 OTBS_0706
NSP35761
NSEN222891 NSE_0043
NPHA348780
NMUL323848 NMUL_A2335
NMEN374833 NMCC_1807
NMEN272831 NMC1834
NMEN122587 NMA2152
NMEN122586 NMB_0336
NGON242231 NGO1666
NFAR247156
NEUT335283 NEUT_0663
NEUR228410 NE2205
NARO279238 SARO_0051
MXAN246197 MXAN_6034
MVAN350058 MVAN_3773
MTUB419947 MRA_3698
MTUB336982 TBFG_13694
MTHE349307 MTHE_0510
MTHE264732
MTHE187420
MTBRV RV3664C
MTBCDC MT3765
MSYN262723
MSTA339860
MSP400668 MMWYL1_3823
MSP189918
MSP164757
MSP164756
MSME246196 MSMEG_4385
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM0001
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MGIL350054 MFLV_2761
MGEN243273
MFLO265311
MCAP340047
MCAP243233 MCA_1263
MBUR259564
MBOV410289 BCG_3722C
MBOV233413 MB3688C
MBAR269797 MBAR_A1345
MAVI243243 MAV_0466
MART243272
MAEO419665
MABS561007 MAB_0428
LXYL281090
LWEL386043 LWE0952
LSAK314315 LSA0823
LREU557436 LREU_0981
LPNE400673 LPC_1299
LPNE297246 LPP1821
LPNE297245 LPL1820
LPNE272624 LPG1854
LMON265669 LMOF2365_0990
LMON169963 LMO0970
LMES203120 LEUM_1931
LLAC272623 L161132
LLAC272622 LACR_0587
LJOH257314
LINN272626 LIN0969
LHEL405566 LHV_1922
LGAS324831
LACI272621
KRAD266940
ILOI283942
IHOS453591
HWAL362976 HQ2476A
HSP64091
HSOM205914 HS_0662
HSAL478009
HMUK485914 HMUK_0115
HMOD498761
HMAR272569 RRNAC3298
HDUC233412 HD_1266
HBUT415426
GOXY290633 GOX1990
GFOR411154
FTUL458234 FTA_1529
FTUL418136 FTW_0579
FTUL401614 FTN_1228
FTUL393115 FTF0782
FTUL393011 FTH_1403
FTUL351581 FTL_1442
FSP106370
FRANT FABI
FPHI484022 FPHI_1460
FJOH376686
FALN326424
ERUM302409 ERGA_CDS_02870
ERUM254945 ERWE_CDS_02920
ELIT314225 ELI_13405
ECHA205920 ECH_0811
ECAN269484 ECAJ_0269
DSP255470 CBDBA1038
DSP216389 DEHABAV1_0942
DRED349161 DRED_2452
DHAF138119
DGEO319795 DGEO_0260
DETH243164
DARO159087 DARO_1935
CVES412965 COSY_0600
CTRA471473 CTLON_0734
CTRA471472 CTL0739
CTET212717
CSUL444179
CSP78 CAUL_5064
CRUT413404 RMAG_0654
CPSY167879
CPRO264201 PC0101
CPNE182082 CPB0621
CPNE138677 CPJ0597
CPNE115713 CPN0597
CPNE115711 CP_0151
CPHY357809 CPHY_0807
CPER289380 CPR_2257
CPER195103 CPF_2554
CPER195102 CPE2272
CPEL335992 SAR11_0395
CMUR243161 TC_0763
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_1050
CJEJ407148 C8J_1314
CJEJ360109 JJD26997_1734
CJEJ354242 CJJ81176_1399
CJEJ195099 CJE_1587
CJEJ192222 CJ1400C
CJEI306537
CHUT269798
CHOM360107 CHAB381_0780
CGLU196627
CFET360106 CFF8240_1426
CFEL264202 CF0863
CEFF196164
CDIP257309
CDIF272563
CDES477974
CCUR360105 CCV52592_1245
CCAV227941 CCA_00144
CBUR434922
CBUR360115
CBUR227377
CBOT508765 CLL_A2492
CBLO291272 BPEN_436
CBLO203907 BFL424
CBEI290402 CBEI_3980
CAULO CC3717
CACE272562 CAC2375
CABO218497 CAB142
BTUR314724 BT0333
BTRI382640 BT_0644
BTHE226186
BSP107806 BU265
BQUI283165 BQ03500
BLON206672
BHER314723 BH0333
BGAR290434 BG0332
BFRA295405
BFRA272559
BCIC186490 BCI_0296
BBUR224326 BB_0332
BBAC360095 BARBAKC583_0396
BAPH372461 BCC_167
BAPH198804 BUSG255
BAFZ390236 BAPKO_0340
AYEL322098
AURANTIMONAS
ASP62928 AZO1569
ASP1667
APLE434271 APJL_0756
APLE416269 APL_0755
APHA212042 APH_0473
APER272557
ANAE240017
AMAR234826 AM428
ALAI441768
AFUL224325
AFER243159 AFE_2617
ADEH290397 ADEH_3480
ACRY349163 ACRY_0830
ACEL351607 ACEL_1152
AAUR290340


Organism features enriched in list (features available for 306 out of the 326 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.001260445112
Disease:Gastroenteritis 0.0008115113
Disease:Pharyngitis 0.005511988
Disease:Wide_range_of_infections 0.00076351111
Disease:bronchitis_and_pneumonitis 0.005511988
Endospores:No 7.178e-8141211
GC_Content_Range4:0-40 5.873e-11149213
GC_Content_Range4:40-60 0.000455799224
GC_Content_Range4:60-100 0.000185158145
GC_Content_Range7:0-30 0.00002083847
GC_Content_Range7:30-40 4.366e-6111166
GC_Content_Range7:50-60 7.325e-636107
GC_Content_Range7:60-70 0.000011249134
Genome_Size_Range5:0-2 6.280e-25134155
Genome_Size_Range5:4-6 7.350e-1652184
Genome_Size_Range5:6-10 0.00001751147
Genome_Size_Range9:0-1 1.562e-82727
Genome_Size_Range9:1-2 1.182e-16107128
Genome_Size_Range9:2-3 0.001287877120
Genome_Size_Range9:4-5 1.661e-92496
Genome_Size_Range9:5-6 0.00001232888
Genome_Size_Range9:6-8 7.421e-6738
Gram_Stain:Gram_Neg 2.415e-7145333
Gram_Stain:Gram_Pos 0.000633095150
Habitat:Host-associated 0.0000252131206
Habitat:Multiple 0.000527476178
Habitat:Terrestrial 0.0003809731
Motility:No 1.095e-6104151
Motility:Yes 1.528e-8107267
Oxygen_Req:Facultative 0.000116985201
Pathogenic_in:Animal 0.00819472666
Shape:Coccus 0.00014575882
Shape:Irregular_coccus 0.00172681517
Shape:Pleomorphic 0.005511988
Shape:Rod 3.396e-9148347
Shape:Sphere 0.00307881619



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951470.5008
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491210.4829
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561200.4471
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761280.4314
GALACTARDEG-PWY (D-galactarate degradation I)1511150.4287
GLUCARDEG-PWY (D-glucarate degradation I)1521150.4247
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861760.4222
GLYCOCAT-PWY (glycogen degradation I)2461590.4215
ACETATEUTIL-PWY (superpathway of acetate utilization and formation)2371550.4212
PWY-6196 (serine racemization)102870.4181
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251490.4168
P163-PWY (lysine fermentation to acetate and butyrate)3672060.4162
P344-PWY (acrylonitrile degradation)2101420.4157
PWY-5918 (heme biosynthesis I)2721690.4142
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001800.4114
PANTO-PWY (pantothenate biosynthesis I)4722380.4078
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652040.4075
GALACTITOLCAT-PWY (galactitol degradation)73680.4029
PWY-561 (superpathway of glyoxylate cycle)1621170.4015
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)1351030.4001



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12038   EG12037   EG11528   
EG120400.9999050.9997980.998793
EG120380.9998710.998649
EG120370.998795
EG11528



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PAIRWISE BLAST SCORES:

  EG12040   EG12038   EG12037   EG11528   
EG120400.0f0---
EG12038-0.0f0--
EG12037--0.0f0-
EG11528---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-41-CPLX (YejA/YejB/YejE/YejF ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.750, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9988 EG12037 (yejA) YEJA-MONOMER (YejA)
   *in cand* 0.9996 0.9988 EG12040 (yejE) YEJE-MONOMER (YejE)
   *in cand* 0.9996 0.9986 EG12038 (yejB) YEJB-MONOMER (YejB)
             0.9994 0.9984 EG12041 (yejF) YEJF-MONOMER (YejF)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9986 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG12037 EG12038 EG12040 (centered at EG12038)
EG11528 (centered at EG11528)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12040   EG12038   EG12037   EG11528   
289/623289/623234/623339/623
AAEO224324:0:Tyes-0-750
AAVE397945:0:Tyes0123
ABAC204669:0:Tyes0--1897
ABAU360910:0:Tyes0-5511299
ABOR393595:0:Tyes2340
ABUT367737:0:Tyes-12002033
ACAU438753:0:Tyes0131644
ACEL351607:0:Tyes---0
ACRY349163:8:Tyes---0
ADEH290397:0:Tyes---0
AEHR187272:0:Tyes0147
AFER243159:0:Tyes---0
AHYD196024:0:Tyes5575580-
AMAR234826:0:Tyes---0
AMAR329726:9:Tyes-041065
AMET293826:0:Tyes012-
AORE350688:0:Tyes1351340-
APHA212042:0:Tyes---0
APLE416269:0:Tyes---0
APLE434271:0:Tno---0
ASAL382245:5:Tyes0-1-
ASP232721:2:Tyes3210
ASP62928:0:Tyes---0
ASP62977:0:Tyes2101828
ASP76114:2:Tyes--0592
AVAR240292:3:Tyes-0-821
BABO262698:1:Tno0132050
BAFZ390236:2:Fyes-0--
BAMB339670:3:Tno012-
BAMB398577:3:Tno012-
BAMY326423:0:Tyes21035
BANT260799:0:Tno035063504275
BANT261594:2:Tno035083506283
BANT568206:2:Tyes293134513430
BANT592021:2:Tno036943692294
BAPH198804:0:Tyes---0
BAPH372461:0:Tyes---0
BBAC264462:0:Tyes210-
BBAC360095:0:Tyes---0
BBRO257310:0:Tyes2113279503899
BBUR224326:21:Fno-0--
BCAN483179:1:Tno0132131
BCEN331271:0:Tno23630-
BCEN331271:1:Tno---0
BCEN331272:2:Tyes---0
BCEN331272:3:Tyes3500352-
BCER226900:1:Tyes6540-959
BCER288681:0:Tno034153413301
BCER315749:1:Tyes-10669
BCER405917:1:Tyes7210-1037
BCER572264:1:Tno5930-897
BCIC186490:0:Tyes---0
BCLA66692:0:Tyes236008571785
BGAR290434:2:Fyes-0--
BHAL272558:0:Tyes10-2551
BHEN283166:0:Tyes10601181
BHER314723:0:Fyes0---
BJAP224911:0:Fyes3201210
BLIC279010:0:Tyes21040
BMAL243160:1:Tno0123
BMAL320388:1:Tno0123
BMAL320389:1:Tyes0124
BMEL224914:1:Tno32024
BMEL359391:1:Tno0131979
BOVI236:1:Tyes0131862
BPAR257311:0:Tno980234103266
BPER257313:0:Tyes-137802646
BPET94624:0:Tyes2241964-0
BPSE272560:1:Tyes0123
BPSE320372:1:Tno0123
BPSE320373:1:Tno0123
BPUM315750:0:Tyes8685-0
BQUI283165:0:Tyes---0
BSP107806:2:Tyes---0
BSP36773:1:Tyes---0
BSP36773:2:Tyes3800382-
BSP376:0:Tyes3201091
BSUB:0:Tyes1710-36
BSUI204722:1:Tyes0132090
BSUI470137:1:Tno0131940
BTHA271848:1:Tno3210
BTHU281309:1:Tno033823380289
BTHU412694:1:Tno6130-861
BTRI382640:1:Tyes---0
BTUR314724:0:Fyes0---
BVIE269482:5:Tyes---0
BVIE269482:6:Tyes10--
BVIE269482:7:Tyes--0-
BWEI315730:4:Tyes6630-973
BXEN266265:0:Tyes---0
BXEN266265:1:Tyes800-0-
CABO218497:0:Tyes0---
CACE272562:1:Tyes-0--
CAULO:0:Tyes---0
CBEI290402:0:Tyes-0--
CBLO203907:0:Tyes---0
CBLO291272:0:Tno---0
CBOT36826:1:Tno01120-
CBOT441770:0:Tyes01125-
CBOT441771:0:Tno01125-
CBOT441772:1:Tno01143-
CBOT498213:1:Tno19320158-
CBOT508765:1:Tyes-0--
CBOT515621:2:Tyes01201-
CBOT536232:0:Tno01144-
CCAV227941:1:Tyes0---
CCHL340177:0:Tyes75913710-
CCON360104:2:Tyes--2350
CCUR360105:0:Tyes---0
CFEL264202:1:Tyes0---
CFET360106:0:Tyes---0
CHOM360107:1:Tyes---0
CHYD246194:0:Tyes01--
CJAP155077:0:Tyes230-
CJEJ192222:0:Tyes---0
CJEJ195099:0:Tno---0
CJEJ354242:2:Tyes---0
CJEJ360109:0:Tyes---0
CJEJ407148:0:Tno---0
CKLU431943:1:Tyes-0--
CMUR243161:1:Tyes0---
CNOV386415:0:Tyes10--
CPEL335992:0:Tyes---0
CPER195102:1:Tyes-0--
CPER195103:0:Tno-0--
CPER289380:3:Tyes-0--
CPHY357809:0:Tyes0---
CPNE115711:1:Tyes0---
CPNE115713:0:Tno0---
CPNE138677:0:Tno0---
CPNE182082:0:Tno0---
CPRO264201:0:Fyes0---
CRUT413404:0:Tyes---0
CSAL290398:0:Tyes210-
CSP501479:6:Fyes210-
CSP501479:8:Fyes---0
CSP78:2:Tyes---0
CTEP194439:0:Tyes0265--
CTRA471472:0:Tyes0---
CTRA471473:0:Tno0---
CVES412965:0:Tyes---0
CVIO243365:0:Tyes2818--0
DARO159087:0:Tyes---0
DDES207559:0:Tyes210568
DGEO319795:1:Tyes---0
DNOD246195:0:Tyes372--0
DOLE96561:0:Tyes120-
DPSY177439:2:Tyes--1580
DRAD243230:2:Tyes0---
DRAD243230:3:Tyes---0
DRED349161:0:Tyes0---
DSHI398580:5:Tyes2101148
DSP216389:0:Tyes-0--
DSP255470:0:Tno-0--
DVUL882:1:Tyes1583158215810
ECAN269484:0:Tyes---0
ECAR218491:0:Tyes7657647630
ECHA205920:0:Tyes---0
ECOL199310:0:Tno9399389370
ECOL316407:0:Tno8988978960
ECOL331111:6:Tno9509499480
ECOL362663:0:Tno8768758740
ECOL364106:1:Tno8948938920
ECOL405955:2:Tyes8478468450
ECOL409438:6:Tyes1119111811170
ECOL413997:0:Tno8368358340
ECOL439855:4:Tno4834824810
ECOL469008:0:Tno012826
ECOL481805:0:Tno012852
ECOL585034:0:Tno9349339320
ECOL585035:0:Tno8528518500
ECOL585055:0:Tno9659649630
ECOL585056:2:Tno9269259240
ECOL585057:0:Tno6656646630
ECOL585397:0:Tno10781077-0
ECOL83334:0:Tno1234123312320
ECOLI:0:Tno9199189170
ECOO157:0:Tno8768758740
EFAE226185:3:Tyes579--0
EFER585054:1:Tyes5965955940
ELIT314225:0:Tyes---0
ERUM254945:0:Tyes---0
ERUM302409:0:Tno---0
ESP42895:1:Tyes5975965950
FMAG334413:1:Tyes10160--
FNOD381764:0:Tyes-100-
FNUC190304:0:Tyes2-0-
FPHI484022:1:Tyes---0
FRANT:0:Tno---0
FSP1855:0:Tyes-2680-
FSUC59374:0:Tyes25602231-
FTUL351581:0:Tno---0
FTUL393011:0:Tno---0
FTUL393115:0:Tyes---0
FTUL401614:0:Tyes---0
FTUL418136:0:Tno---0
FTUL458234:0:Tno---0
GBET391165:0:Tyes1763176417650
GKAU235909:1:Tyes0--21
GMET269799:1:Tyes2101331
GOXY290633:5:Tyes---0
GSUL243231:0:Tyes4224214200
GTHE420246:1:Tyes01277-21
GURA351605:0:Tyes1145114311420
GVIO251221:0:Tyes01-65
HACI382638:1:Tyes-80141
HARS204773:0:Tyes0123
HAUR316274:2:Tyes1034812042
HCHE349521:0:Tyes3450
HDUC233412:0:Tyes---0
HHAL349124:0:Tyes0123
HHEP235279:0:Tyes133413330860
HINF281310:0:Tyes-0-667
HINF374930:0:Tyes-530-0
HINF71421:0:Tno-0-602
HMAR272569:8:Tyes-0--
HMUK485914:1:Tyes-0--
HNEP81032:0:Tyes10-552
HPY:0:Tno56107410750
HPYL357544:1:Tyes66103310340
HPYL85963:0:Tno539819820
HSOM205914:1:Tyes---0
HSOM228400:0:Tno01-316
HWAL362976:1:Tyes-0--
JSP290400:1:Tyes1407140814090
JSP375286:0:Tyes3210
KPNE272620:2:Tyes1587158615850
LBIF355278:2:Tyes101917-
LBIF456481:2:Tno101979-
LBOR355276:1:Tyes011895-
LBOR355277:1:Tno183518340-
LBRE387344:2:Tyes774--0
LCAS321967:1:Tyes4440--
LCHO395495:0:Tyes014431
LDEL321956:0:Tyes-380-0
LDEL390333:0:Tyes-315-0
LHEL405566:0:Tyes---0
LINN272626:1:Tno---0
LINT189518:1:Tyes115911580-
LINT267671:1:Tno232423230-
LINT363253:3:Tyes81820181
LLAC272622:5:Tyes---0
LLAC272623:0:Tyes---0
LMES203120:1:Tyes-0--
LMON169963:0:Tno---0
LMON265669:0:Tyes---0
LPLA220668:0:Tyes0--363
LPNE272624:0:Tno---0
LPNE297245:1:Fno---0
LPNE297246:1:Fyes---0
LPNE400673:0:Tno---0
LREU557436:0:Tyes---0
LSAK314315:0:Tyes---0
LSPH444177:1:Tyes07072614414
LWEL386043:0:Tyes---0
MABS561007:1:Tyes0---
MACE188937:0:Tyes-05-
MAER449447:0:Tyes-3908-0
MAQU351348:2:Tyes2104
MAVI243243:0:Tyes0---
MBAR269797:1:Tyes--0-
MBOV233413:0:Tno0---
MBOV410289:0:Tno0---
MCAP243233:0:Tyes---0
MEXT419610:0:Tyes21892083
MFLA265072:0:Tyes230-
MGIL350054:3:Tyes--0-
MHUN323259:0:Tyes-023-
MLOT266835:2:Tyes0131625
MMAG342108:0:Tyes2796279727980
MMAR394221:0:Tyes10-2185
MMAZ192952:0:Tyes--0-
MPET420662:1:Tyes-1767-0
MSME246196:0:Tyes--0-
MSP266779:3:Tyes3376337733790
MSP400668:0:Tyes-0--
MSP409:2:Tyes267502577
MSUC221988:0:Tyes0--104
MTBCDC:0:Tno0---
MTBRV:0:Tno0---
MTHE349307:0:Tyes--0-
MTUB336982:0:Tno0---
MTUB419947:0:Tyes0---
MVAN350058:0:Tyes--0-
MXAN246197:0:Tyes---0
NARO279238:0:Tyes---0
NEUR228410:0:Tyes---0
NEUT335283:2:Tyes---0
NGON242231:0:Tyes---0
NHAM323097:2:Tyes3373363340
NMEN122586:0:Tno---0
NMEN122587:0:Tyes---0
NMEN272831:0:Tno---0
NMEN374833:0:Tno---0
NMUL323848:3:Tyes---0
NOCE323261:1:Tyes997996-0
NSEN222891:0:Tyes---0
NSP103690:6:Tyes02599-2406
NSP387092:0:Tyes-01203
NWIN323098:0:Tyes2642632610
OANT439375:5:Tyes013736
OCAR504832:0:Tyes5255265280
OIHE221109:0:Tyes-2086-0
OTSU357244:0:Fyes---0
PABY272844:0:Tyes10--
PAER208963:0:Tyes2104
PAER208964:0:Tno2340
PARC259536:0:Tyes3208
PCAR338963:0:Tyes023178
PCRY335284:1:Tyes6790
PENT384676:0:Tyes210-
PFLU205922:0:Tyes945340
PFLU216595:1:Tyes013-
PFLU220664:0:Tyes3205
PHOR70601:0:Tyes--0-
PING357804:0:Tyes210-
PLUM243265:0:Fyes22400-2342
PLUT319225:0:Tyes0272--
PMAR146891:0:Tyes---0
PMAR167539:0:Tyes---0
PMAR167540:0:Tyes---0
PMAR167542:0:Tyes---0
PMAR167546:0:Tyes---0
PMAR167555:0:Tyes---0
PMAR59920:0:Tno---0
PMAR74546:0:Tyes---0
PMAR74547:0:Tyes---0
PMAR93060:0:Tyes---0
PMEN399739:0:Tyes2340
PMOB403833:0:Tyes-8370-
PMUL272843:1:Tyes1726--0
PNAP365044:8:Tyes0123
PPEN278197:0:Tyes0--430
PPRO298386:2:Tyes120-
PPUT160488:0:Tno210-
PPUT351746:0:Tyes012-
PPUT76869:0:Tno210-
PSP117:0:Tyes---0
PSP296591:2:Tyes3210
PSP312153:0:Tyes0123
PSP56811:2:Tyes4524534550
PSTU379731:0:Tyes2104
PSYR205918:0:Tyes2340
PSYR223283:2:Tyes2104
RAKA293614:0:Fyes---0
RBEL336407:0:Tyes---0
RBEL391896:0:Fno---0
RCAN293613:0:Fyes---0
RCAS383372:0:Tyes-0-2976
RCON272944:0:Tno---0
RDEN375451:4:Tyes2101818
RETL347834:5:Tyes6867660
REUT264198:3:Tyes0123
REUT381666:2:Tyes0123
RFEL315456:2:Tyes---0
RFER338969:1:Tyes3210
RLEG216596:6:Tyes210840
RMAS416276:1:Tyes---0
RMET266264:2:Tyes0123
RPAL258594:0:Tyes2505250625080
RPAL316055:0:Tyes013818
RPAL316056:0:Tyes3383338433860
RPAL316057:0:Tyes2243224422460
RPAL316058:0:Tyes5625615590
RPOM246200:1:Tyes1363136413650
RPRO272947:0:Tyes---0
RRIC392021:0:Fno---0
RRIC452659:0:Tyes---0
RRUB269796:1:Tyes5425415400
RSOL267608:1:Tyes3210
RSP101510:3:Fyes0---
RSP357808:0:Tyes-3015-0
RSPH272943:4:Tyes1399140014010
RSPH349101:2:Tno1348134913500
RSPH349102:5:Tyes210520
RTYP257363:0:Tno---0
RXYL266117:0:Tyes15--0
SACI56780:0:Tyes101130-
SALA317655:1:Tyes---0
SARE391037:0:Tyes-013802893
SAUR158878:1:Tno06-23
SAUR158879:1:Tno07-23
SAUR196620:0:Tno07-23
SAUR273036:0:Tno0--18
SAUR282458:0:Tno---0
SAUR282459:0:Tno07-23
SAUR359786:1:Tno07-23
SAUR359787:1:Tno07-23
SAUR367830:3:Tno07-24
SAUR418127:0:Tyes07-23
SAUR426430:0:Tno07-24
SAUR93061:0:Fno07-23
SAUR93062:1:Tno07-22
SAVE227882:1:Fyes---0
SBOY300268:1:Tyes3533543550
SCO:2:Fyes---0
SDEG203122:0:Tyes0---
SDYS300267:1:Tyes012445
SELO269084:0:Tyes--01019
SENT209261:0:Tno012915
SENT220341:0:Tno9889879860
SENT295319:0:Tno012522
SENT321314:2:Tno5505495480
SENT454169:2:Tno5445435420
SEPI176279:1:Tyes---0
SEPI176280:0:Tno---0
SERY405948:0:Tyes--01560
SFLE198214:0:Tyes9008998980
SFLE373384:0:Tno8918908890
SFUM335543:0:Tyes320-
SGLO343509:3:Tyes012576
SHAE279808:0:Tyes---0
SHIGELLA:0:Tno8378368350
SLAC55218:1:Fyes2101234
SMED366394:3:Tyes01281
SMEL266834:2:Tyes012754
SPRO399741:1:Tyes210-
SSAP342451:2:Tyes---0
SSON300269:1:Tyes3683673660
SSP1131:0:Tyes---0
SSP1148:0:Tyes21171769-0
SSP292414:2:Tyes1429143014310
SSP321327:0:Tyes02203-1549
SSP321332:0:Tyes3310-305
SSP387093:0:Tyes---0
SSP644076:5:Fyes---0
SSP644076:6:Fyes012-
SSP64471:0:Tyes---0
SSP84588:0:Tyes---0
STHE292459:0:Tyes2698102881
STRO369723:0:Tyes-101333
STYP99287:1:Tyes5165155140
TCRU317025:0:Tyes---0
TDEN243275:0:Tyes085--
TDEN292415:0:Tyes---0
TDEN326298:0:Tyes--01691
TELO197221:0:Tyes0111-551
TERY203124:0:Tyes-0-1378
TFUS269800:0:Tyes---0
TLET416591:0:Tyes0160510-
TMAR243274:0:Tyes5240684-
TPET390874:0:Tno13190--
TPSE340099:0:Tyes145101-
TROS309801:0:Tyes-0--
TROS309801:1:Tyes0-1186-
TSP1755:0:Tyes0-1568-
TSP28240:0:Tyes11201210-
TTEN273068:0:Tyes0-261-
TTHE262724:1:Tyes-0-729
TTHE300852:2:Tyes-1056-0
TTUR377629:0:Tyes0---
VCHO:1:Fyes012-
VCHO345073:0:Tno012-
VEIS391735:1:Tyes0123
VFIS312309:2:Tyes102-
VPAR223926:1:Tyes102-
VVUL196600:1:Tyes--0-
VVUL196600:2:Tyes10930--
VVUL216895:0:Tno--0-
VVUL216895:1:Tno20290--
WPIP80849:0:Tyes---0
WPIP955:0:Tyes---0
WSUC273121:0:Tyes1361351340
XAUT78245:1:Tyes2101512
YENT393305:1:Tyes012-
YPES187410:5:Tno210-
YPES214092:3:Tno012-
YPES349746:2:Tno012-
YPES360102:3:Tyes012-
YPES377628:2:Tno210-
YPES386656:2:Tno210-
YPSE273123:2:Tno012-
YPSE349747:2:Tno210-
ZMOB264203:0:Tyes---0



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