CANDIDATE ID: 848

CANDIDATE ID: 848

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9940483e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG12303 (ycfH) (b1100)
   Products of gene:
     - EG12303-MONOMER (predicted metallodependent hydrolase)

- EG12302 (tmk) (b1098)
   Products of gene:
     - DTMPKI-MONOMER (dTMP kinase)
       Reactions:
        dTMP + ATP  ->  dTDP + ADP + H+
         In pathways
         PWY0-166 (pyrimidine deoxyribonucleotides de novo biosynthesis I)
         PWY-6545 (PWY-6545)
         P1-PWY (P1-PWY)

- EG11619 (mfd) (b1114)
   Products of gene:
     - EG11619-MONOMER (transcription-repair coupling factor)

- EG11500 (holB) (b1099)
   Products of gene:
     - EG11500-MONOMER (DNA polymerase III, δ prime subunit)
     - CPLX0-3801 (DNA polymerase III, preinitiation complex)
     - CPLX0-3803 (DNA polymerase III, holoenzyme)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 342
Effective number of orgs (counting one per cluster within 468 clusters): 238

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP1755 Thermoanaerobacter sp.4
TROS309801 ncbi Thermomicrobium roseum DSM 51594
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STRO369723 ncbi Salinispora tropica CNB-4403
STHE322159 ncbi Streptococcus thermophilus LMD-94
STHE299768 ncbi Streptococcus thermophilus CNRZ10664
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
STHE264199 ncbi Streptococcus thermophilus LMG 183114
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B3
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSP292414 ncbi Ruegeria sp. TM10403
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153053
SRUB309807 ncbi Salinibacter ruber DSM 138553
SPYO370554 ncbi Streptococcus pyogenes MGAS107504
SPYO370553 ncbi Streptococcus pyogenes MGAS20964
SPYO370552 ncbi Streptococcus pyogenes MGAS102704
SPYO370551 ncbi Streptococcus pyogenes MGAS94294
SPYO319701 ncbi Streptococcus pyogenes MGAS61804
SPYO293653 ncbi Streptococcus pyogenes MGAS50054
SPYO286636 ncbi Streptococcus pyogenes MGAS103944
SPYO198466 ncbi Streptococcus pyogenes MGAS3154
SPYO193567 ncbi Streptococcus pyogenes SSI-14
SPYO186103 ncbi Streptococcus pyogenes MGAS82324
SPYO160490 ncbi Streptococcus pyogenes M1 GAS4
SPRO399741 ncbi Serratia proteamaculans 5684
SPNE488221 ncbi Streptococcus pneumoniae 705853
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-63
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-143
SPNE171101 ncbi Streptococcus pneumoniae R63
SPNE170187 ncbi Streptococcus pneumoniae G543
SPNE1313 Streptococcus pneumoniae3
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMUT210007 ncbi Streptococcus mutans UA1594
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis3
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGOR29390 Streptococcus gordonii Challis3
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23383
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63013
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SCO ncbi Streptomyces coelicolor A3(2)3
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAUR93062 ncbi Staphylococcus aureus aureus COL3
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83253
SAUR426430 ncbi Staphylococcus aureus aureus Newman3
SAUR418127 ncbi Staphylococcus aureus aureus Mu33
SAUR367830 Staphylococcus aureus aureus USA3003
SAUR359787 ncbi Staphylococcus aureus aureus JH13
SAUR359786 ncbi Staphylococcus aureus aureus JH93
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4763
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2523
SAUR273036 ncbi Staphylococcus aureus RF1223
SAUR196620 ncbi Staphylococcus aureus aureus MW23
SAUR158879 ncbi Staphylococcus aureus aureus N3153
SAUR158878 ncbi Staphylococcus aureus aureus Mu503
SARE391037 ncbi Salinispora arenicola CNS-2053
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SAGA211110 ncbi Streptococcus agalactiae NEM3163
SAGA208435 ncbi Streptococcus agalactiae 2603V/R3
SAGA205921 ncbi Streptococcus agalactiae A9093
SACI56780 ncbi Syntrophus aciditrophicus SB3
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170293
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.13
RSP357808 ncbi Roseiflexus sp. RS-13
RSOL267608 ncbi Ralstonia solanacearum GMI10003
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332093
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPOM246200 ncbi Ruegeria pomeroyi DSS-33
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RPAL316057 ncbi Rhodopseudomonas palustris BisB53
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL316055 ncbi Rhodopseudomonas palustris BisA533
RPAL258594 ncbi Rhodopseudomonas palustris CGA0093
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
RCAS383372 ncbi Roseiflexus castenholzii DSM 139413
PTHE370438 ncbi Pelotomaculum thermopropionicum SI3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6663
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24403
PPRO298386 ncbi Photobacterium profundum SS94
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257454
PNAP365044 ncbi Polaromonas naphthalenivorans CJ23
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
PACN267747 ncbi Propionibacterium acnes KPA1712023
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM54
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2553
NSP35761 Nocardioides sp.3
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16223
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MLOT266835 ncbi Mesorhizobium loti MAFF3030993
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA13
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53343
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LSAK314315 ncbi Lactobacillus sakei sakei 23K3
LREU557436 ncbi Lactobacillus reuteri DSM 200164
LPNE400673 ncbi Legionella pneumophila Corby3
LPNE297246 ncbi Legionella pneumophila Paris3
LPNE297245 ncbi Legionella pneumophila Lens3
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 13
LMON265669 ncbi Listeria monocytogenes 4b F23653
LMON169963 ncbi Listeria monocytogenes EGD-e3
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82933
LLAC272623 ncbi Lactococcus lactis lactis Il14034
LLAC272622 ncbi Lactococcus lactis cremoris SK114
LJOH257314 ncbi Lactobacillus johnsonii NCC 5333
LINN272626 ncbi Listeria innocua Clip112623
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118423
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3653
LCHO395495 ncbi Leptothrix cholodnii SP-64
LCAS321967 ncbi Lactobacillus casei ATCC 3343
LBRE387344 ncbi Lactobacillus brevis ATCC 3673
LACI272621 ncbi Lactobacillus acidophilus NCFM3
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS13
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL13
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans3
GURA351605 ncbi Geobacter uraniireducens Rf43
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GOXY290633 ncbi Gluconobacter oxydans 621H3
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-003
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL401614 ncbi Francisella novicida U1123
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL393011 ncbi Francisella tularensis holarctica OSU183
FTUL351581 Francisella tularensis holarctica FSC2003
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S853
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
FMAG334413 ncbi Finegoldia magna ATCC 293283
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25943
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5833
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DSHI398580 ncbi Dinoroseobacter shibae DFL 123
DRED349161 ncbi Desulfotomaculum reducens MI-14
DPSY177439 ncbi Desulfotalea psychrophila LSv543
DOLE96561 ncbi Desulfococcus oleovorans Hxd33
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CSP501479 Citreicella sp. SE453
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)3
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CNOV386415 ncbi Clostridium novyi NT3
CJAP155077 Cellvibrio japonicus4
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
BWEI315730 ncbi Bacillus weihenstephanensis KBAB43
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHU412694 ncbi Bacillus thuringiensis Al Hakam3
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSUB ncbi Bacillus subtilis subtilis 1684
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)4
BPUM315750 ncbi Bacillus pumilus SAFR-0323
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23083
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BHAL272558 ncbi Bacillus halodurans C-1253
BCLA66692 ncbi Bacillus clausii KSM-K163
BCIC186490 Candidatus Baumannia cicadellinicola3
BCER572264 ncbi Bacillus cereus 03BB1023
BCER315749 ncbi Bacillus cytotoxicus NVH 391-983
BCER226900 ncbi Bacillus cereus ATCC 145793
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1004
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)3
BANT592021 ncbi Bacillus anthracis A02483
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor3
BANT260799 ncbi Bacillus anthracis Sterne3
BAMY326423 ncbi Bacillus amyloliquefaciens FZB423
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9413
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP13
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AORE350688 ncbi Alkaliphilus oremlandii OhILAs4
AMET293826 ncbi Alkaliphilus metalliredigens QYMF3
AMAR329726 ncbi Acaryochloris marina MBIC110173
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-13
ACEL351607 ncbi Acidothermus cellulolyticus 11B4
ACAU438753 ncbi Azorhizobium caulinodans ORS 5713
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAEO224324 ncbi Aquifex aeolicus VF53


Names of the homologs of the genes in the group in each of these orgs
  EG12303   EG12302   EG11619   EG11500   
YPSE349747 YPSIP31758_1585YPSIP31758_1583YPSIP31758_1598YPSIP31758_1584
YPSE273123 YPTB2464YPTB2466YPTB2443YPTB2465
YPES386656 YPDSF_1840YPDSF_1842YPDSF_1824YPDSF_1841
YPES377628 YPN_2022YPN_2024YPN_2007YPN_2023
YPES360102 YPA_1918YPA_1920YPA_1900YPA_1919
YPES349746 YPANGOLA_A3491YPANGOLA_A3493YPANGOLA_A2864YPANGOLA_A3492
YPES214092 YPO1607YPO1605YPO1625YPO1606
YPES187410 Y1766Y1764Y1784Y1765
YENT393305 YE1642YE1640YE1709YE1641
XAUT78245 XAUT_4330XAUT_4325XAUT_4262XAUT_4326
VVUL216895 VV1_3000VV1_3002VV1_2078VV1_3001
VVUL196600 VV1282VV1280VV2365VV1281
VPAR223926 VP2047VP2049VP0975VP2048
VFIS312309 VF1733VF1735VFA0459VF1734
VEIS391735 VEIS_1008VEIS_1005VEIS_4359VEIS_0511
VCHO345073 VC0395_A1600VC0395_A1602VC0395_A1476VC0395_A1601
VCHO VC2014VC2016VC1886VC2015
TTUR377629 TERTU_1729TERTU_1725TERTU_1948TERTU_1727
TTEN273068 TTE0111TTE0094TTE2565TTE0039
TSP1755 TETH514_0067TETH514_0053TETH514_0593TETH514_0056
TROS309801 TRD_0742TRD_0201TRD_0670TRD_0002
TPSE340099 TETH39_2136TETH39_2150TETH39_0169TETH39_2147
TDEN292415 TBD_1540TBD_1543TBD_1656TBD_1542
TCRU317025 TCR_0720TCR_0718TCR_1168TCR_0719
SWOL335541 SWOL_0050SWOL_0040SWOL_0073
STYP99287 STM1202STM1200STM1216STM1201
STRO369723 STROP_4023STROP_0884STROP_4022
STHE322159 STER_1774STER_0526STER_0007STER_0527
STHE299768 STR1801STR0489STR0006STR0490
STHE292459 STH3251STH3258STH3235STH13
STHE264199 STU1801STU0489STU0006STU0490
SSP94122 SHEWANA3_1769SHEWANA3_1766SHEWANA3_2289SHEWANA3_1767
SSP644076 SCH4B_0497SCH4B_0495SCH4B_2294
SSP321332 CYB_2464CYB_0832CYB_1207
SSP321327 CYA_2780CYA_2830CYA_1763
SSP292414 TM1040_3593TM1040_3591TM1040_1349
SSON300269 SSO_1120SSO_1118SSO_1134SSO_1119
SSED425104 SSED_2645SSED_2648SSED_2833SSED_2647
SSAP342451 SSP2265SSP2274SSP2253
SRUB309807 SRU_1299SRU_2701SRU_0857
SPYO370554 MGAS10750_SPY0215MGAS10750_SPY0326MGAS10750_SPY0006MGAS10750_SPY0327
SPYO370553 MGAS2096_SPY0238MGAS2096_SPY0350MGAS2096_SPY0006MGAS2096_SPY0351
SPYO370552 MGAS10270_SPY0220MGAS10270_SPY0326MGAS10270_SPY0006MGAS10270_SPY0327
SPYO370551 MGAS9429_SPY0221MGAS9429_SPY0332MGAS9429_SPY0006MGAS9429_SPY0333
SPYO319701 M28_SPY0214M28_SPY0319M28_SPY0006M28_SPY0320
SPYO293653 M5005_SPY0220M5005_SPY0330M5005_SPY0006M5005_SPY0331
SPYO286636 M6_SPY0252M6_SPY0356M6_SPY0006M6_SPY0357
SPYO198466 SPYM3_0188SPYM3_0289SPYM3_0006SPYM3_0290
SPYO193567 SPS0193SPS1570SPS0006SPS1569
SPYO186103 SPYM18_0243SPYM18_0449SPYM18_0007SPYM18_0450
SPYO160490 SPY0260SPY0399SPY0008SPY0400
SPRO399741 SPRO_1913SPRO_1911SPRO_1998SPRO_1912
SPNE488221 SP70585_2063SP70585_0973SP70585_0006
SPNE487214 SPH_2133SPH_1043SPH_0006
SPNE487213 SPT_1971SPT_1265SPT_0040
SPNE171101 SPR1805SPR0835SPR0006
SPNE170187 SPN09022SPN06108SPN01079
SPNE1313 SPJ_1984SPJ_0874SPJ_0006
SPEA398579 SPEA_1926SPEA_1923SPEA_1543SPEA_1924
SONE211586 SO_2610SO_2613SO_2255SO_2612
SMUT210007 SMU_341SMU_1663SMU_08SMU_1662
SMEL266834 SMC01193SMC01189SMC04450
SMED366394 SMED_1289SMED_1292SMED_1399SMED_1291
SLOI323850 SHEW_1582SHEW_1579SHEW_1630SHEW_1580
SLAC55218 SL1157_3309SL1157_3307SL1157_2698
SHIGELLA YCFHTMKMFDHOLB
SHAL458817 SHAL_2373SHAL_2376SHAL_1613SHAL_2375
SGOR29390 SGO_0188SGO_1539SGO_2140
SGLO343509 SG1067SG1065SG1075SG1066
SFUM335543 SFUM_3626SFUM_0398SFUM_3479SFUM_0156
SFLE373384 SFV_1120SFV_1118SFV_1134SFV_1119
SFLE198214 AAN42723.1AAN42721.1AAN42736.1AAN42722.1
SERY405948 SACE_0800SACE_0826SACE_0379
SENT454169 SEHA_C1316SEHA_C1314SEHA_C1330SEHA_C1315
SENT321314 SCH_1152SCH_1150SCH_1166SCH_1151
SENT295319 SPA1649SPA1651SPA1634SPA1650
SENT220341 STY1241STY1239STY1256STY1240
SENT209261 T1718T1720T1704T1719
SELO269084 SYC2506_DSYC1411_CSYC0227_C
SDYS300267 SDY_2050SDY_2052SDY_2036SDY_2051
SDEN318161 SDEN_2048SDEN_2051SDEN_1674SDEN_2050
SDEG203122 SDE_1654SDE_1634SDE_1796SDE_1652
SCO SCO3151SCO3542SCO3109
SBOY300268 SBO_1963SBO_1965SBO_1947SBO_1964
SBAL402882 SHEW185_2449SHEW185_2452SHEW185_2395SHEW185_2451
SBAL399599 SBAL195_2569SBAL195_2572SBAL195_2511SBAL195_2571
SAUR93062 SACOL0534SACOL0524SACOL0547
SAUR93061 SAOUHSC_00462SAOUHSC_00451SAOUHSC_00477
SAUR426430 NWMN_0454NWMN_0446NWMN_0466
SAUR418127 SAHV_0488SAHV_0479SAHV_0500
SAUR367830 SAUSA300_0468SAUSA300_0459SAUSA300_0481
SAUR359787 SAURJH1_0525SAURJH1_0516SAURJH1_0538
SAUR359786 SAURJH9_0512SAURJH9_0503SAURJH9_0525
SAUR282459 SAS0448SAS0439SAS0460
SAUR282458 SAR0492SAR0483SAR0504
SAUR273036 SAB0440SAB0431SAB0452
SAUR196620 MW0446MW0437MW0458
SAUR158879 SA0449SA0440SA0461
SAUR158878 SAV0491SAV0482SAV0503
SARE391037 SARE_4404SARE_0829SARE_4403
SALA317655 SALA_1260SALA_1257SALA_1653SALA_1258
SAGA211110 GBS1825GBS1626GBS0008
SAGA208435 SAG_1782SAG_1575SAG_0008
SAGA205921 SAK_1804SAK_1591SAK_0008
SACI56780 SYN_03204SYN_03606SYN_02759
RSPH349102 RSPH17025_0555RSPH17025_1236RSPH17025_1500
RSPH349101 RSPH17029_2329RSPH17029_2202RSPH17029_1443
RSPH272943 RSP_0675RSP_0551RSP_2850
RSP357808 ROSERS_0316ROSERS_3232ROSERS_3660
RSOL267608 RSC1787RSC1784RSC1642
RSAL288705 RSAL33209_0398RSAL33209_2974RSAL33209_0397
RRUB269796 RRU_A1700RRU_A1703RRU_A1726
RPOM246200 SPO_2742SPO_2740SPO_2074
RPAL316058 RPB_2682RPB_2679RPB_2850
RPAL316057 RPD_2718RPD_2715RPD_2622
RPAL316056 RPC_2706RPC_2703RPC_2610
RPAL316055 RPE_2868RPE_2865RPE_2790
RPAL258594 RPA2778RPA2775RPA2663
RMET266264 RMET_1825RMET_1828RMET_1955RMET_1827
RLEG216596 RL2472RL2476RL2386RL2475
RFER338969 RFER_2258RFER_2255RFER_1331RFER_2256
REUT381666 H16_A1573H16_A1569H16_A1455H16_A1570
REUT264198 REUT_A1437REUT_A1434REUT_A1360REUT_A1435
RETL347834 RHE_CH02156RHE_CH02160RHE_CH02095RHE_CH02159
RDEN375451 RD1_3468RD1_3466RD1_2746
RCAS383372 RCAS_0246RCAS_3720RCAS_1478
PTHE370438 PTH_0070PTH_0062PTH_0063
PSYR223283 PSPTO_3824PSPTO_3827PSPTO_2101PSPTO_3826
PSYR205918 PSYR_1655PSYR_1652PSYR_1896PSYR_1653
PSTU379731 PST_2614PST_2617PST_2657PST_2616
PSP56811 PSYCPRWF_1914PSYCPRWF_0126PSYCPRWF_1636PSYCPRWF_1391
PSP312153 PNUC_0964PNUC_0966PNUC_0929PNUC_0965
PSP296591 BPRO_2516BPRO_2717BPRO_2518
PPUT76869 PPUTGB1_1497PPUTGB1_1495PPUTGB1_1689PPUTGB1_1496
PPUT351746 PPUT_3793PPUT_3795PPUT_3594PPUT_3794
PPUT160488 PP_1967PP_2148PP_1966
PPRO298386 PBPRA1202PBPRA1200PBPRA2392PBPRA1201
PPEN278197 PEPE_0267PEPE_1481PEPE_1552PEPE_1479
PNAP365044 PNAP_1951PNAP_2550PNAP_1670
PMUL272843 PM1675PM1673PM1041PM1674
PMEN399739 PMEN_1636PMEN_1633PMEN_1593PMEN_1634
PLUM243265 PLU2826PLU2828PLU2815PLU2827
PING357804 PING_1096PING_1094PING_2204PING_1095
PHAL326442 PSHAA1800PSHAA1803PSHAA1836PSHAA1802
PFLU220664 PFL_1803PFL_1801PFL_1954PFL_1802
PFLU216595 PFLU4698PFLU4700PFLU1565PFLU4699
PFLU205922 PFL_4149PFL_4152PFL_3866PFL_4151
PENT384676 PSEEN1627PSEEN1624PSEEN3715PSEEN1625
PCRY335284 PCRYO_1532PCRYO_0155PCRYO_1664PCRYO_1065
PCAR338963 PCAR_1695PCAR_1691PCAR_0091PCAR_1692
PATL342610 PATL_2115PATL_2117PATL_1725PATL_2116
PARC259536 PSYC_0890PSYC_0145PSYC_1484PSYC_1313
PAER208964 PA2959PA2962PA3002PA2961
PAER208963 PA14_25780PA14_25740PA14_25230PA14_25760
PACN267747 PPA0243PPA0541PPA0244
OIHE221109 OB0047OB0036OB0063OB0039
OCAR504832 OCAR_6124OCAR_6127OCAR_6210OCAR_6126
NWIN323098 NWI_1461NWI_1464NWI_1513
NSP35761 NOCA_0386NOCA_0924NOCA_0387
NOCE323261 NOC_1657NOC_1660NOC_1642NOC_1659
NMUL323848 NMUL_A1381NMUL_A1387NMUL_A0639
NMEN374833 NMCC_0735NMCC_0623NMCC_1194NMCC_0733
NMEN272831 NMC0724NMC0619NMC1214NMC0722
NMEN122587 NMA0982NMA0869NMA1491NMA0980
NMEN122586 NMB_0771NMB_0670NMB_1281NMB_0769
NHAM323097 NHAM_2007NHAM_2010NHAM_2053NHAM_2009
NGON242231 NGO0349NGO0239NGO0623NGO0347
NEUT335283 NEUT_1285NEUT_0536NEUT_0129NEUT_0590
NEUR228410 NE1516NE2181NE0008NE2180
NARO279238 SARO_1938SARO_1941SARO_1982SARO_1357
MXAN246197 MXAN_2806MXAN_1013MXAN_2800
MTHE264732 MOTH_0049MOTH_0042MOTH_0081MOTH_0043
MSUC221988 MS0571MS0569MS0216MS0570
MSP409 M446_6467M446_6278M446_6308
MSP400668 MMWYL1_2265MMWYL1_2267MMWYL1_1709MMWYL1_2266
MSP266779 MESO_1584MESO_1581MESO_1702MESO_1582
MPET420662 MPE_A1857MPE_B0240MPE_A1569MPE_A1859
MMAG342108 AMB2447AMB2450AMB2465
MLOT266835 MLL0418MLL0424MLL0827
MFLA265072 MFLA_1497MFLA_1500MFLA_1748MFLA_1499
MEXT419610 MEXT_4186MEXT_4191MEXT_4163
MCAP243233 MCA_1993MCA_1996MCA_1864MCA_1995
MAQU351348 MAQU_3661MAQU_1862MAQU_1933MAQU_1574
LWEL386043 LWE0154LWE2642LWE0176
LSPH444177 BSPH_0059BSPH_0048BSPH_0075BSPH_0051
LSAK314315 LSA1657LSA0340LSA1604
LREU557436 LREU_0211LREU_0330LREU_0262LREU_0332
LPNE400673 LPC_0818LPC_0815LPC_2333
LPNE297246 LPP1357LPP1354LPP1016
LPNE297245 LPL1353LPL1350LPL0983
LPNE272624 LPG1402LPG1399LPG0954
LMON265669 LMOF2365_0196LMOF2365_2672LMOF2365_0225
LMON169963 LMO0185LMO2693LMO0214
LMES203120 LEUM_1615LEUM_0279LEUM_0399
LLAC272623 L87336L3846L0263L0280
LLAC272622 LACR_0715LACR_0445LACR_0011LACR_0446
LJOH257314 LJ_0203LJ_0427LJ_0277
LINN272626 LIN0224LIN2841LIN0246
LDEL390333 LDB0343LDB1631LDB0363
LDEL321956 LBUL_0298LBUL_1511LBUL_0318
LCHO395495 LCHO_1881LCHO_1878LCHO_2006LCHO_1879
LCAS321967 LSEI_2595LSEI_2259LSEI_2547
LBRE387344 LVIS_0456LVIS_0604LVIS_0516
LACI272621 LBA0214LBA0381LBA0273
KPNE272620 GKPORF_B0011GKPORF_B0009GKPORF_B0027GKPORF_B0010
JSP375286 MMA_1982MMA_1986MMA_1408MMA_1985
JSP290400 JANN_1275JANN_1277JANN_2322
ILOI283942 IL1333IL1336IL1520IL1335
HSOM228400 HSM_0516HSM_0514HSM_1578HSM_0515
HSOM205914 HS_1485HS_1487HS_1161HS_1486
HMOD498761 HM1_0751HM1_0759HM1_0721HM1_0758
HINF71421 HI_0454HI_0456HI_1258HI_0455
HINF374930 CGSHIEE_00720CGSHIEE_00710CGSHIEE_04040CGSHIEE_00715
HINF281310 NTHI0581NTHI0586NTHI1906NTHI0582
HHAL349124 HHAL_0006HHAL_1257HHAL_0007
HDUC233412 HD_1936HD_1933HD_0975HD_1935
HCHE349521 HCH_02416HCH_02148HCH_02683HCH_02670
HARS204773 HEAR1400HEAR1396HEAR1914
GURA351605 GURA_2510GURA_3153GURA_0140
GTHE420246 GTNG_0031GTNG_0023GTNG_0048GTNG_0024
GSUL243231 GSU_2489GSU_2229GSU_0017GSU_0094
GOXY290633 GOX0015GOX0018GOX0055
GMET269799 GMET_2464GMET_2318GMET_3547GMET_3422
GKAU235909 GK0032GK0024GK0048GK0025
GBET391165 GBCGDNIH1_1078GBCGDNIH1_1075GBCGDNIH1_0836
FTUL458234 FTA_0653FTA_1757FTA_0967
FTUL418136 FTW_0442FTW_0202FTW_1085
FTUL401614 FTN_1408FTN_1598FTN_1039
FTUL393115 FTF1439CFTF0117FTF0644C
FTUL393011 FTH_0623FTH_1601FTH_0897
FTUL351581 FTL_0620FTL_1660FTL_0917
FSUC59374 FSU0068FSU1935FSU0697
FRANT FT.1441CTMKMFD
FPHI484022 FPHI_1278FPHI_1019FPHI_1551
FMAG334413 FMG_0545FMG_1129FMG_0481
ESP42895 ENT638_1615ENT638_1613ENT638_1629ENT638_1614
ELIT314225 ELI_06230ELI_06215ELI_05115
EFER585054 EFER_1827EFER_1829EFER_1278EFER_1828
EFAE226185 EF_0934EF_2764EF_0257
ECOO157 YCFHTMKMFDHOLB
ECOL83334 ECS1478ECS1476ECS1492ECS1477
ECOL585397 ECED1_1243ECED1_1241ECED1_1257ECED1_1242
ECOL585057 ECIAI39_2061ECIAI39_2063ECIAI39_2046ECIAI39_2062
ECOL585056 ECUMN_1277ECUMN_1275ECUMN_1292ECUMN_1276
ECOL585055 EC55989_1212EC55989_1210EC55989_1226EC55989_1211
ECOL585035 ECS88_1114ECS88_1112ECS88_1128ECS88_1113
ECOL585034 ECIAI1_1135ECIAI1_1133ECIAI1_1151ECIAI1_1134
ECOL481805 ECOLC_2501ECOLC_2503ECOLC_2487ECOLC_2502
ECOL469008 ECBD_2501ECBD_2503ECBD_2487ECBD_2502
ECOL439855 ECSMS35_2027ECSMS35_2029ECSMS35_2012ECSMS35_2028
ECOL413997 ECB_01096ECB_01094ECB_01110ECB_01095
ECOL409438 ECSE_1164ECSE_1162ECSE_1179ECSE_1163
ECOL405955 APECO1_181APECO1_179APECO1_195APECO1_180
ECOL364106 UTI89_C1227UTI89_C1225UTI89_C1242UTI89_C1226
ECOL362663 ECP_1092ECP_1090ECP_1106ECP_1091
ECOL331111 ECE24377A_1221ECE24377A_1219ECE24377A_1236ECE24377A_1220
ECOL316407 ECK1086:JW1086:B1100ECK1084:JW1084:B1098ECK1100:JW1100:B1114ECK1085:JW1085:B1099
ECOL199310 C1372C1370C1389C1371
ECAR218491 ECA1804ECA1802ECA1821ECA1803
DSHI398580 DSHI_0920DSHI_0922DSHI_1561
DRED349161 DRED_0066DRED_0059DRED_0111DRED_0060
DPSY177439 DP2779DP0282DP0784
DOLE96561 DOLE_1165DOLE_1705DOLE_0542
DARO159087 DARO_2194DARO_2197DARO_1965DARO_2196
CVIO243365 CV_3720CV_3723CV_1146CV_3722
CVES412965 COSY_0077COSY_0214COSY_0922
CSP501479 CSE45_1081CSE45_2688CSE45_1943
CSAL290398 CSAL_1609CSAL_1606CSAL_1567CSAL_1607
CRUT413404 RMAG_0071RMAG_0220RMAG_1021
CPSY167879 CPS_2305CPS_2302CPS_2139CPS_2303
CNOV386415 NT01CX_0686NT01CX_0761NT01CX_1020
CJAP155077 CJA_1986CJA_1993CJA_1764CJA_1989
CDES477974 DAUD_0042DAUD_0036DAUD_0072DAUD_0037
CBUR434922 COXBU7E912_1574COXBU7E912_1577COXBU7E912_1246COXBU7E912_1576
CBUR360115 COXBURSA331_A0611COXBURSA331_A0608COXBURSA331_A1299COXBURSA331_A0609
CBUR227377 CBU_0502CBU_0499CBU_1148CBU_0500
CBLO291272 BPEN_411BPEN_413BPEN_412
CBLO203907 BFL399BFL401BFL400
BWEI315730 BCERKBAB4_0034BCERKBAB4_0048BCERKBAB4_0026
BVIE269482 BCEP1808_1815BCEP1808_1817BCEP1808_1871BCEP1808_1816
BTHU412694 BALH_0035BALH_0026BALH_0048
BTHA271848 BTH_I2157BTH_I2154BTH_I2088BTH_I2155
BSUI470137 BSUIS_A1040BSUIS_A1036BSUIS_B0575
BSUI204722 BR_0996BR_0992BR_A0579
BSUB BSU00390BSU00280BSU00550BSU00310
BSP376 BRADO3830BRADO3827BRADO3771
BSP36773 BCEP18194_A5191BCEP18194_A5193BCEP18194_A5255BCEP18194_A5192
BSP107806 BU355BU353BU294BU354
BPUM315750 BPUM_0023BPUM_0012BPUM_0039
BPSE320373 BURPS668_2278BURPS668_2281BURPS668_2359BURPS668_2280
BPSE272560 BPSL1439BPSL1436BPSL2100BPSL1437
BPET94624 BPET2502BPET2504BPET1694BPET3553
BPER257313 BP1849BP1847BP0864BP1549
BPAR257311 BPP1561BPP1559BPP3367BPP1221
BOVI236 GBOORF0992GBOORF0989GBOORFA0597
BMEL359391 BAB1_1015BAB1_1011BAB2_0661
BMEL224914 BMEI0986BMEI0989BMEII0688
BMAL320389 BMA10247_1186BMA10247_1189BMA10247_1260BMA10247_1188
BMAL320388 BMASAVP1_A1913BMASAVP1_A1916BMASAVP1_A1988BMASAVP1_A1915
BMAL243160 BMA_1422BMA_1425BMA_1491BMA_1424
BLIC279010 BL00532BL02509BL00515BL00541
BJAP224911 BLL4515BLL4518BLL4601
BHAL272558 BH0054BH0042BH0069
BCLA66692 ABC0067ABC0050ABC0083
BCIC186490 BCI_0429BCI_0431BCI_0430
BCER572264 BCA_0048BCA_0039BCA_0063
BCER315749 BCER98_0034BCER98_0025BCER98_0048
BCER226900 BC_0044BC_0036BC_0058
BCEN331272 BCEN2424_1891BCEN2424_1893BCEN2424_1944BCEN2424_1892
BCEN331271 BCEN_6188BCEN_6186BCEN_6135BCEN_6187
BCAN483179 BCAN_A1013BCAN_A1009BCAN_B0579
BBRO257310 BB2639BB2637BB3818BB1438
BBAC264462 BD1042BD1040BD3893BD1041
BAPH198804 BUSG343BUSG341BUSG342
BANT592021 BAA_0048BAA_0039BAA_0063
BANT568206 BAMEG_0048BAMEG_0039BAMEG_0063
BANT261594 GBAA0037GBAA0027GBAA0052
BANT260799 BAS0038BAS0029BAS0052
BAMY326423 RBAM_000480RBAM_000370RBAM_000640
BAMB398577 BAMMC406_1800BAMMC406_1802BAMMC406_1859BAMMC406_1801
BAMB339670 BAMB_1828BAMB_1830BAMB_1932BAMB_1829
BABO262698 BRUAB1_1002BRUAB1_0998BRUAB2_0645
ASP76114 EBA5421EBA5415EBA6555EBA5417
ASP62977 ACIAD2359ACIAD2588ACIAD1395
ASP62928 AZO1598AZO1595AZO1673AZO1596
ASP232721 AJS_1720AJS_1717AJS_3157AJS_2350
ASAL382245 ASA_2047ASA_2049ASA_1881ASA_2048
APLE434271 APJL_1846APJL_1853APJL_1357APJL_1852
APLE416269 APL_1810APL_1817APL_1339APL_1816
AORE350688 CLOS_2661CLOS_0060CLOS_2642CLOS_0062
AMET293826 AMET_0111AMET_0082AMET_0160
AMAR329726 AM1_3591AM1_6041AM1_4147
AHYD196024 AHA_2258AHA_2256AHA_2003AHA_2257
AFER243159 AFE_2055AFE_1174AFE_2663AFE_1173
AEHR187272 MLG_1416MLG_1800MLG_1415
ACEL351607 ACEL_0176ACEL_1971ACEL_1913ACEL_1970
ACAU438753 AZC_2178AZC_2173AZC_1221
ABOR393595 ABO_1077ABO_1074ABO_1028ABO_1075
ABAU360910 BAV1766BAV1764BAV1061BAV0914
ABAC204669 ACID345_2029ACID345_3227ACID345_4549
AAVE397945 AAVE_3409AAVE_3412AAVE_1580AAVE_3411
AAEO224324 AQ_2060AQ_969AQ_1855


Organism features enriched in list (features available for 322 out of the 342 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.007657919
Arrangment:Chains 0.00181006392
Arrangment:Pairs 0.003067174112
Arrangment:Singles 0.0000439135286
Disease:Pneumonia 0.00073391212
Disease:Wide_range_of_infections 0.00134981111
Endospores:No 5.788e-886211
GC_Content_Range4:0-40 7.656e-790213
GC_Content_Range4:40-60 0.0008485141224
GC_Content_Range7:0-30 3.438e-11547
GC_Content_Range7:50-60 2.442e-680107
GC_Content_Range7:60-70 0.001663888134
Genome_Size_Range5:0-2 1.031e-1642155
Genome_Size_Range5:4-6 2.363e-10136184
Genome_Size_Range9:0-1 0.0000625527
Genome_Size_Range9:1-2 7.215e-1237128
Genome_Size_Range9:4-5 0.00012356996
Genome_Size_Range9:5-6 6.768e-66788
Gram_Stain:Gram_Neg 7.565e-8215333
Habitat:Host-associated 0.000984897206
Habitat:Multiple 6.559e-6122178
Habitat:Specialized 0.00324822053
Motility:Yes 0.0051766161267
Optimal_temp.:35-37 0.00039841313
Optimal_temp.:37 4.806e-638106
Oxygen_Req:Anaerobic 1.674e-1126102
Oxygen_Req:Facultative 1.080e-21164201
Shape:Coccobacillus 0.00134981111
Shape:Coccus 0.00177495782
Shape:Rod 0.0000135216347
Shape:Sphere 0.0003543319
Shape:Spiral 5.554e-7534
Temp._range:Hyperthermophilic 2.446e-6223
Temp._range:Psychrophilic 0.004546299



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 186
Effective number of orgs (counting one per cluster within 468 clusters): 154

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP84588 ncbi Synechococcus sp. WH 81021
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP101510 ncbi Rhodococcus jostii RHA11
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 230
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71201
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GFOR411154 ncbi Gramella forsetii KT08031
FSP106370 ncbi Frankia sp. CcI31
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E881
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CDIF272563 ncbi Clostridium difficile 6301
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BPSE320372 ncbi Burkholderia pseudomallei 1710b1
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40180


Names of the homologs of the genes in the group in each of these orgs
  EG12303   EG12302   EG11619   EG11500   
WSUC273121
WPIP955 WD_1120
WPIP80849 WB_0380
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA1607
TTHE262724 TT_C1243
TPEN368408
TPAL243276
TKOD69014
TDEN243275
TACI273075
STOK273063
SSP84588 SYNW2238OR2604
SSP387093 SUN_1230
SSOL273057
SMAR399550
SACI330779
RTYP257363 RT0677
RSP101510 RHA1_RO05760
RRIC452659 RRIOWA_1246
RRIC392021 A1G_05805
RPRO272947 RP682
RMAS416276 RMA_1080
RFEL315456 RF_0236
RCON272944 RC1045
RCAN293613 A1E_04535
RBEL391896 A1I_06685
RBEL336407 RBE_0239
RALB246199 GRAORF_2004
RAKA293614 A1C_05325
PTOR263820
PSP117 RB12445
PRUM264731
PMOB403833 PMOB_0051
PMAR74547 PMT1990
PMAR167539 PRO_0152
PLUT319225 PLUT_1310
PISL384616
PINT246198
PHOR70601
PGIN242619 PG_0932
PFUR186497 PF1730
PDIS435591
PAST100379
PARS340102
PAER178306
PABY272844 PAB0319
OTSU357244 OTBS_1946
NSP387092
NSP103690 ALL4708
NSEN222891 NSE_0357
NPHA348780
NFAR247156 NFA48750
MTUB419947 MRA_3679
MTUB336982 TBFG_13673
MTHE349307
MTHE187420
MTBRV RV3644C
MTBCDC MT3747
MSYN262723 MS53_0052
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632 MSC_0046
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML0202
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_1396
MGEN243273
MFLO265311 MFL676
MCAP340047 MCAP_0010
MBUR259564
MBOV410289 BCG_3702C
MBOV233413 MB3668C
MBAR269797
MAVI243243
MART243272
MAER449447 MAE_54490
MAEO419665
MACE188937
LXYL281090 LXX04070
LINT363253 LI0760
LINT267671 LIC_13481
LINT189518 LA4339
LBOR355277 LBJ_0025
LBOR355276 LBL_2979
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HBUT415426
HACI382638
GFOR411154 GFO_3295
FSP106370 FRANCCI3_3926
FNUC190304 FN1343
FJOH376686
ERUM302409 ERGA_CDS_03030
ERUM254945 ERWE_CDS_03080
ECHA205920 ECH_0793
ECAN269484 ECAJ_0283
DVUL882 DVU_2140
DETH243164 DET_0778
CTRA471473 CTLON_0435
CTRA471472 CTL0440
CTET212717 CTC_00244
CTEP194439 CT_1313
CSUL444179
CPNE182082 CPB0280
CPNE138677 CPJ0273
CPNE115713 CPN0273
CPNE115711 CP_0486
CPHY357809
CPEL335992 SAR11_1002
CMIC443906 CMM_0928
CMIC31964 CMS0188
CMET456442
CMAQ397948
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK1951
CHUT269798
CHOM360107
CFET360106 CFF8240_1192
CFEL264202 CF0500
CDIP257309 DIP0333
CDIF272563 CD3539
CCUR360105 CCV52592_0460
CCON360104 CCC13826_1985
CCHL340177 CAG_0925
CBOT536232 CLM_4031
CBOT515621 CLJ_B3869
CBOT498213 CLD_0944
CBOT441772 CLI_3759
CBOT441771 CLC_3517
CBOT441770 CLB_3620
CBOT36826 CBO3539
CBEI290402 CBEI_0086
CABO218497 CAB495
BXEN266265
BTUR314724
BTHE226186
BPSE320372 BURPS1710B_A2574
BHER314723
BGAR290434
BFRA295405
BFRA272559
BBUR224326
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042 APH_0528
APER272557
AMAR234826 AM447
ALAI441768 ACL_1402
AFUL224325
ABUT367737


Organism features enriched in list (features available for 176 out of the 186 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00487751892
Arrangment:Pairs 0.000476420112
Arrangment:Singles 7.699e-6110286
Disease:Botulism 0.002408855
Disease:Leptospirosis 0.008108744
Disease:None 0.0014384858
Disease:Pharyngitis 0.009920968
Disease:bronchitis_and_pneumonitis 0.009920968
Endospores:No 3.762e-1097211
GC_Content_Range4:0-40 8.662e-790213
GC_Content_Range4:60-100 0.000137527145
GC_Content_Range7:0-30 8.248e-133747
GC_Content_Range7:50-60 0.000102617107
GC_Content_Range7:60-70 0.000051623134
Genome_Size_Range5:0-2 4.056e-2093155
Genome_Size_Range5:4-6 5.372e-927184
Genome_Size_Range5:6-10 0.0067456747
Genome_Size_Range9:0-1 2.096e-72127
Genome_Size_Range9:1-2 1.552e-1272128
Genome_Size_Range9:3-4 0.00458161477
Genome_Size_Range9:4-5 0.00469621996
Genome_Size_Range9:5-6 3.027e-7888
Genome_Size_Range9:6-8 0.0075997538
Gram_Stain:Gram_Neg 0.000034979333
Gram_Stain:Gram_Pos 0.000232629150
Habitat:Host-associated 0.000153581206
Habitat:Multiple 5.859e-632178
Habitat:Specialized 0.00120882653
Optimal_temp.:37 3.729e-754106
Optimal_temp.:85 0.008108744
Oxygen_Req:Anaerobic 1.464e-957102
Oxygen_Req:Facultative 4.728e-1423201
Oxygen_Req:Microaerophilic 0.00105411218
Pathogenic_in:No 0.003618855226
Shape:Coccus 0.00172531482
Shape:Irregular_coccus 3.540e-81617
Shape:Pleomorphic 0.009920968
Shape:Rod 1.913e-777347
Shape:Sphere 1.037e-61619
Shape:Spiral 1.093e-82634
Temp._range:Hyperthermophilic 0.00001131723
Temp._range:Mesophilic 0.0013664130473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181910.4824
VALDEG-PWY (valine degradation I)2902310.4643
GLYCOCAT-PWY (glycogen degradation I)2462030.4485
PWY-5918 (heme biosynthesis I)2722150.4272
PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)5193340.4246
PWY-5386 (methylglyoxal degradation I)3052330.4231
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951670.4171
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831590.4146
THISYN-PWY (thiamin biosynthesis I)5023260.4112
P163-PWY (lysine fermentation to acetate and butyrate)3672640.4100
IDNCAT-PWY (L-idonate degradation)2461970.4089
PWY-5686 (uridine-5'-phosphate biosynthesis)5263340.4026
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491350.4023
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862190.4013



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12302   EG11619   EG11500   
EG123030.9998730.9992770.999829
EG123020.998960.999901
EG116190.998589
EG11500



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PAIRWISE BLAST SCORES:

  EG12303   EG12302   EG11619   EG11500   
EG123030.0f0---
EG12302-0.0f0--
EG11619--0.0f0-
EG11500---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11500 EG12302 EG12303 (centered at EG11500)
EG11619 (centered at EG11619)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12303   EG12302   EG11619   EG11500   
417/623410/623413/623271/623
AAEO224324:0:Tyes7730-631
AAUR290340:2:Tyes-0461-
AAVE397945:0:Tyes1797180001799
ABAC204669:0:Tyes012052545-
ABAU360910:0:Tyes8508481450
ABOR393595:0:Tyes4946047
ACAU438753:0:Tyes9699640-
ACEL351607:0:Tyes0179217341791
ACRY349163:8:Tyes0-849-
ADEH290397:0:Tyes0-3045-
AEHR187272:0:Tyes-13800
AFER243159:0:Tyes871114680
AHYD196024:0:Tyes2492470248
ALAI441768:0:Tyes---0
AMAR234826:0:Tyes0---
AMAR329726:9:Tyes02421555-
AMET293826:0:Tyes28072-
ANAE240017:0:Tyes-6200-
AORE350688:0:Tyes2661026422
APHA212042:0:Tyes0---
APLE416269:0:Tyes5035080507
APLE434271:0:Tno5165230522
ASAL382245:5:Tyes1591610160
ASP1667:3:Tyes-0534-
ASP232721:2:Tyes301394611
ASP62928:0:Tyes30841
ASP62977:0:Tyes88711000-
ASP76114:2:Tyes306791
AVAR240292:3:Tyes22440--
BABO262698:0:Tno--0-
BABO262698:1:Tno40--
BAMB339670:3:Tno021071
BAMB398577:3:Tno02591
BAMY326423:0:Tyes11027-
BANT260799:0:Tno9023-
BANT261594:2:Tno9024-
BANT568206:2:Tyes9024-
BANT592021:2:Tno9024-
BAPH198804:0:Tyes20-1
BAPH372461:0:Tyes1--0
BBAC264462:0:Tyes2026421
BBAC360095:0:Tyes18-0-
BBRO257310:0:Tyes1212121024010
BCAN483179:0:Tno--0-
BCAN483179:1:Tno40--
BCEN331271:0:Tno5654055
BCEN331272:3:Tyes02531
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