CANDIDATE ID: 850

CANDIDATE ID: 850

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9931683e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG12303 (ycfH) (b1100)
   Products of gene:
     - EG12303-MONOMER (predicted metallodependent hydrolase)

- EG12302 (tmk) (b1098)
   Products of gene:
     - DTMPKI-MONOMER (dTMP kinase)
       Reactions:
        dTMP + ATP  ->  dTDP + ADP + H+
         In pathways
         PWY0-166 (pyrimidine deoxyribonucleotides de novo biosynthesis I)
         PWY-6545 (PWY-6545)
         P1-PWY (P1-PWY)

- EG11619 (mfd) (b1114)
   Products of gene:
     - EG11619-MONOMER (transcription-repair coupling factor)

- EG11481 (tatD) (b3841 (obsolete))
   Products of gene:
     - EG11481-MONOMER (Tat-linked protein quality control)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 376
Effective number of orgs (counting one per cluster within 468 clusters): 267

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM43
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO923
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-23
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79013
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP28240 Thermotoga sp.3
TSP1755 Thermoanaerobacter sp.4
TROS309801 ncbi Thermomicrobium roseum DSM 51594
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TPET390874 ncbi Thermotoga petrophila RKU-13
TMAR243274 ncbi Thermotoga maritima MSB83
TERY203124 ncbi Trichodesmium erythraeum IMS1013
TELO197221 ncbi Thermosynechococcus elongatus BP-13
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252593
TCRU317025 ncbi Thiomicrospira crunogena XCL-23
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE322159 ncbi Streptococcus thermophilus LMD-94
STHE299768 ncbi Streptococcus thermophilus CNRZ10664
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
STHE264199 ncbi Streptococcus thermophilus LMG 183114
SSUI391295 ncbi Streptococcus suis 05ZYH333
SSP94122 ncbi Shewanella sp. ANA-34
SSP64471 ncbi Synechococcus sp. CC93113
SSP644076 Silicibacter sp. TrichCH4B4
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP292414 ncbi Ruegeria sp. TM10404
SSP1148 ncbi Synechocystis sp. PCC 68033
SSP1131 Synechococcus sp. CC96053
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153053
SRUB309807 ncbi Salinibacter ruber DSM 138553
SPYO370554 ncbi Streptococcus pyogenes MGAS107503
SPYO370553 ncbi Streptococcus pyogenes MGAS20963
SPYO370552 ncbi Streptococcus pyogenes MGAS102703
SPYO370551 ncbi Streptococcus pyogenes MGAS94293
SPYO319701 ncbi Streptococcus pyogenes MGAS61803
SPYO293653 ncbi Streptococcus pyogenes MGAS50053
SPYO286636 ncbi Streptococcus pyogenes MGAS103943
SPYO198466 ncbi Streptococcus pyogenes MGAS3153
SPYO193567 ncbi Streptococcus pyogenes SSI-13
SPYO186103 ncbi Streptococcus pyogenes MGAS82323
SPYO160490 ncbi Streptococcus pyogenes M1 GAS3
SPRO399741 ncbi Serratia proteamaculans 5684
SPNE488221 ncbi Streptococcus pneumoniae 705854
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-64
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-144
SPNE171101 ncbi Streptococcus pneumoniae R64
SPNE170187 ncbi Streptococcus pneumoniae G544
SPNE1313 Streptococcus pneumoniae4
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMUT210007 ncbi Streptococcus mutans UA1593
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4193
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis3
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14353
SGOR29390 Streptococcus gordonii Challis3
SGLO343509 ncbi Sodalis glossinidius morsitans3
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1973
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SCO ncbi Streptomyces coelicolor A3(2)3
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SAGA211110 ncbi Streptococcus agalactiae NEM3164
SAGA208435 ncbi Streptococcus agalactiae 2603V/R4
SAGA205921 ncbi Streptococcus agalactiae A9094
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170293
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.13
RSP357808 ncbi Roseiflexus sp. RS-14
RSOL267608 ncbi Ralstonia solanacearum GMI10003
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH343
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1183
REUT381666 ncbi Ralstonia eutropha H163
REUT264198 ncbi Ralstonia eutropha JMP1343
RETL347834 ncbi Rhizobium etli CFN 423
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
RCAS383372 ncbi Roseiflexus castenholzii DSM 139414
PTHE370438 ncbi Pelotomaculum thermopropionicum SI3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.3
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-13
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24403
PPRO298386 ncbi Photobacterium profundum SS94
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257454
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PMAR93060 ncbi Prochlorococcus marinus MIT 92153
PMAR74546 ncbi Prochlorococcus marinus MIT 93123
PMAR59920 ncbi Prochlorococcus marinus NATL2A3
PMAR167555 ncbi Prochlorococcus marinus NATL1A3
PMAR167546 ncbi Prochlorococcus marinus MIT 93013
PMAR167542 ncbi Prochlorococcus marinus MIT 95153
PMAR167540 Prochlorococcus marinus pastoris MED4ax3
PMAR146891 ncbi Prochlorococcus marinus AS96013
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K53
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-43
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NOCE323261 ncbi Nitrosococcus oceani ATCC 197073
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NMEN374833 ncbi Neisseria meningitidis 0534423
NMEN272831 ncbi Neisseria meningitidis FAM183
NMEN122587 ncbi Neisseria meningitidis Z24913
NMEN122586 ncbi Neisseria meningitidis MC583
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10903
NEUT335283 ncbi Nitrosomonas eutropha C913
NEUR228410 ncbi Nitrosomonas europaea ATCC 197183
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM13
MMAR394221 ncbi Maricaulis maris MCS103
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath3
MAQU351348 ncbi Marinobacter aquaeolei VT83
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53344
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LSAK314315 ncbi Lactobacillus sakei sakei 23K4
LREU557436 ncbi Lactobacillus reuteri DSM 200164
LPNE400673 ncbi Legionella pneumophila Corby3
LPNE297246 ncbi Legionella pneumophila Paris3
LPNE297245 ncbi Legionella pneumophila Lens3
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 13
LPLA220668 ncbi Lactobacillus plantarum WCFS13
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82934
LLAC272623 ncbi Lactococcus lactis lactis Il14034
LLAC272622 ncbi Lactococcus lactis cremoris SK114
LJOH257314 ncbi Lactobacillus johnsonii NCC 5333
LINN272626 ncbi Listeria innocua Clip112624
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118423
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3653
LCHO395495 ncbi Leptothrix cholodnii SP-63
LCAS321967 ncbi Lactobacillus casei ATCC 3344
LBRE387344 ncbi Lactobacillus brevis ATCC 3674
LACI272621 ncbi Lactobacillus acidophilus NCFM3
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille3
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23363
HSOM205914 ncbi Haemophilus somnus 129PT3
HNEP81032 Hyphomonas neptunium3
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL13
HDUC233412 ncbi Haemophilus ducreyi 35000HP3
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237793
HARS204773 ncbi Herminiimonas arsenicoxydans3
GVIO251221 ncbi Gloeobacter violaceus PCC 74213
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GOXY290633 ncbi Gluconobacter oxydans 621H3
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-003
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL401614 ncbi Francisella novicida U1123
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL393011 ncbi Francisella tularensis holarctica OSU183
FTUL351581 Francisella tularensis holarctica FSC2003
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
FMAG334413 ncbi Finegoldia magna ATCC 293284
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DSP255470 ncbi Dehalococcoides sp. CBDB13
DSP216389 ncbi Dehalococcoides sp. BAV13
DSHI398580 ncbi Dinoroseobacter shibae DFL 123
DRED349161 ncbi Desulfotomaculum reducens MI-14
DPSY177439 ncbi Desulfotalea psychrophila LSv543
DOLE96561 ncbi Desulfococcus oleovorans Hxd33
DNOD246195 ncbi Dichelobacter nodosus VCS1703A3
DHAF138119 ncbi Desulfitobacterium hafniense Y513
DARO159087 ncbi Dechloromonas aromatica RCB3
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CSP78 Caulobacter sp.3
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)3
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPER289380 ncbi Clostridium perfringens SM1013
CPER195103 ncbi Clostridium perfringens ATCC 131243
CPER195102 ncbi Clostridium perfringens 133
CNOV386415 ncbi Clostridium novyi NT4
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3313
CBUR227377 ncbi Coxiella burnetii RSA 4933
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CAULO ncbi Caulobacter crescentus CB153
CACE272562 ncbi Clostridium acetobutylicum ATCC 8243
BWEI315730 ncbi Bacillus weihenstephanensis KBAB43
BVIE269482 ncbi Burkholderia vietnamiensis G43
BTRI382640 ncbi Bartonella tribocorum CIP 1054763
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-273
BTHA271848 ncbi Burkholderia thailandensis E2643
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1684
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.3
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)3
BQUI283165 ncbi Bartonella quintana Toulouse3
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6683
BPSE272560 ncbi Burkholderia pseudomallei K962433
BPET94624 Bordetella petrii3
BPER257313 ncbi Bordetella pertussis Tohama I3
BPAR257311 ncbi Bordetella parapertussis 128223
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102473
BMAL320388 ncbi Burkholderia mallei SAVP13
BMAL243160 ncbi Burkholderia mallei ATCC 233443
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-13
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W3
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L3
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24243
BCEN331271 ncbi Burkholderia cenocepacia AU 10543
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB503
BBAC360095 ncbi Bartonella bacilliformis KC5833
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1004
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-63
BAMB339670 ncbi Burkholderia ambifaria AMMD3
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294133
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP13
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS423
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL033
APLE416269 ncbi Actinobacillus pleuropneumoniae L203
AORE350688 ncbi Alkaliphilus oremlandii OhILAs4
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-13
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3
ACRY349163 ncbi Acidiphilium cryptum JF-53
ACEL351607 ncbi Acidothermus cellulolyticus 11B4
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N3
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-13
AAEO224324 ncbi Aquifex aeolicus VF53


Names of the homologs of the genes in the group in each of these orgs
  EG12303   EG12302   EG11619   EG11481   
ZMOB264203 ZMO1093ZMO1646ZMO1093
YPSE349747 YPSIP31758_1585YPSIP31758_1583YPSIP31758_1598YPSIP31758_0277
YPSE273123 YPTB2464YPTB2466YPTB2443YPTB0261
YPES386656 YPDSF_1840YPDSF_1842YPDSF_1824YPDSF_3392
YPES377628 YPN_2022YPN_2024YPN_2007YPN_0189
YPES360102 YPA_1918YPA_1920YPA_1900YPA_0249
YPES349746 YPANGOLA_A3491YPANGOLA_A3493YPANGOLA_A2864YPANGOLA_A3635
YPES214092 YPO1607YPO1605YPO1625
YPES187410 Y1766Y1764Y1784Y0455
YENT393305 YE1642YE1640YE1709YE0262
XAUT78245 XAUT_4330XAUT_4325XAUT_4262XAUT_4330
VVUL216895 VV1_3000VV1_3002VV1_2078VV1_0903
VVUL196600 VV1282VV1280VV2365VV0184
VPAR223926 VP2047VP2049VP0975VP2439
VFIS312309 VF1733VF1735VFA0459VF0052
VEIS391735 VEIS_1008VEIS_1005VEIS_4359
VCHO345073 VC0395_A1600VC0395_A1602VC0395_A1476VC0395_A2415
VCHO VC2014VC2016VC1886VC0103
TTUR377629 TERTU_1729TERTU_1725TERTU_1948
TTEN273068 TTE0111TTE0094TTE2565TTE0111
TSP28240 TRQ2_0262TRQ2_1717TRQ2_0262
TSP1755 TETH514_0067TETH514_0053TETH514_0593TETH514_0067
TROS309801 TRD_0742TRD_0201TRD_0670TRD_0742
TPSE340099 TETH39_2136TETH39_2150TETH39_0169TETH39_2136
TPET390874 TPET_0264TPET_1644TPET_0264
TMAR243274 TM_0667TM_1099TM_0667
TERY203124 TERY_2940TERY_1564TERY_2940
TELO197221 TLL1187TLR2055TLL1187
TDEN292415 TBD_1540TBD_1543TBD_1656
TCRU317025 TCR_0720TCR_0718TCR_1168
SWOL335541 SWOL_0050SWOL_0040SWOL_0073SWOL_0050
STYP99287 STM1202STM1200STM1216STM3976
STHE322159 STER_1774STER_0526STER_0007STER_1774
STHE299768 STR1801STR0489STR0006STR1801
STHE292459 STH3251STH3258STH3235STH3251
STHE264199 STU1801STU0489STU0006STU1801
SSUI391295 SSU05_0661SSU05_0008SSU05_2011
SSP94122 SHEWANA3_1769SHEWANA3_1766SHEWANA3_2289SHEWANA3_3732
SSP64471 GSYN2500GSYN2739GSYN2500
SSP644076 SCH4B_0497SCH4B_0495SCH4B_2294SCH4B_0497
SSP321332 CYB_2464CYB_0832CYB_1207CYB_2464
SSP321327 CYA_2780CYA_2830CYA_1763CYA_2780
SSP292414 TM1040_3593TM1040_3591TM1040_1349TM1040_3593
SSP1148 SLL1786SLL0377SLL1786
SSP1131 SYNCC9605_2068SYNCC9605_2380SYNCC9605_2068
SSON300269 SSO_1120SSO_1118SSO_1134SSO_4014
SSED425104 SSED_2645SSED_2648SSED_2833SSED_4103
SSAP342451 SSP2265SSP2274SSP2253
SRUB309807 SRU_1299SRU_2701SRU_1299
SPYO370554 MGAS10750_SPY0215MGAS10750_SPY0326MGAS10750_SPY0006
SPYO370553 MGAS2096_SPY0238MGAS2096_SPY0350MGAS2096_SPY0006
SPYO370552 MGAS10270_SPY0220MGAS10270_SPY0326MGAS10270_SPY0006
SPYO370551 MGAS9429_SPY0221MGAS9429_SPY0332MGAS9429_SPY0006
SPYO319701 M28_SPY0214M28_SPY0319M28_SPY0006
SPYO293653 M5005_SPY0220M5005_SPY0330M5005_SPY0006
SPYO286636 M6_SPY0252M6_SPY0356M6_SPY0006
SPYO198466 SPYM3_0188SPYM3_0289SPYM3_0006
SPYO193567 SPS0193SPS1570SPS0006
SPYO186103 SPYM18_0243SPYM18_0449SPYM18_0007
SPYO160490 SPY0260SPY0399SPY0008
SPRO399741 SPRO_1913SPRO_1911SPRO_1998SPRO_0254
SPNE488221 SP70585_2063SP70585_0973SP70585_0006SP70585_2063
SPNE487214 SPH_2133SPH_1043SPH_0006SPH_2133
SPNE487213 SPT_1971SPT_1265SPT_0040SPT_1971
SPNE171101 SPR1805SPR0835SPR0006SPR1805
SPNE170187 SPN09022SPN06108SPN01079SPN09022
SPNE1313 SPJ_1984SPJ_0874SPJ_0006SPJ_1984
SPEA398579 SPEA_1926SPEA_1923SPEA_1543SPEA_3799
SONE211586 SO_2610SO_2613SO_2255SO_4206
SMUT210007 SMU_341SMU_1663SMU_08
SMEL266834 SMC01193SMC01189SMC04450
SMED366394 SMED_1289SMED_1292SMED_1399
SLOI323850 SHEW_1582SHEW_1579SHEW_1630SHEW_3380
SLAC55218 SL1157_3309SL1157_3307SL1157_2698
SHIGELLA YCFHTMKMFDYIGW
SHAL458817 SHAL_2373SHAL_2376SHAL_1613SHAL_3886
SHAE279808 SH2520SH2508SH2520
SGOR29390 SGO_0188SGO_1539SGO_2140
SGLO343509 SG1067SG1065SG1075
SFUM335543 SFUM_3626SFUM_0398SFUM_3479SFUM_3626
SFLE373384 SFV_1120SFV_1118SFV_1134SFV_3659
SFLE198214 AAN42723.1AAN42721.1AAN42736.1AAN45352.1
SENT454169 SEHA_C1316SEHA_C1314SEHA_C1330SEHA_C4303
SENT321314 SCH_1152SCH_1150SCH_1166SCH_3874
SENT295319 SPA1649SPA1651SPA1634SPA3817
SENT220341 STY1241STY1239STY1256STY3583
SENT209261 T1718T1720T1704T3321
SELO269084 SYC2506_DSYC1411_CSYC0227_CSYC2506_D
SDYS300267 SDY_2050SDY_2052SDY_2036
SDEN318161 SDEN_2048SDEN_2051SDEN_1674SDEN_0454
SDEG203122 SDE_1654SDE_1634SDE_1796SDE_1654
SCO SCO3151SCO3542SCO3109
SBOY300268 SBO_1963SBO_1965SBO_1947SBO_3853
SBAL402882 SHEW185_2449SHEW185_2452SHEW185_2395SHEW185_0412
SBAL399599 SBAL195_2569SBAL195_2572SBAL195_2511SBAL195_0424
SAUR93062 SACOL0534SACOL0524SACOL0547SACOL0534
SAUR93061 SAOUHSC_00462SAOUHSC_00451SAOUHSC_00477SAOUHSC_00462
SAUR426430 NWMN_0454NWMN_0446NWMN_0466NWMN_0454
SAUR418127 SAHV_0488SAHV_0479SAHV_0500SAHV_0488
SAUR367830 SAUSA300_0468SAUSA300_0459SAUSA300_0481SAUSA300_0468
SAUR359787 SAURJH1_0525SAURJH1_0516SAURJH1_0538SAURJH1_0525
SAUR359786 SAURJH9_0512SAURJH9_0503SAURJH9_0525SAURJH9_0512
SAUR282459 SAS0448SAS0439SAS0460SAS0448
SAUR282458 SAR0492SAR0483SAR0504SAR0492
SAUR273036 SAB0440SAB0431SAB0452SAB0440
SAUR196620 MW0446MW0437MW0458MW0446
SAUR158879 SA0449SA0440SA0461SA0449
SAUR158878 SAV0491SAV0482SAV0503SAV0491
SALA317655 SALA_1260SALA_1257SALA_1653SALA_1260
SAGA211110 GBS1825GBS1626GBS0008GBS1825
SAGA208435 SAG_1782SAG_1575SAG_0008SAG_1782
SAGA205921 SAK_1804SAK_1591SAK_0008SAK_1804
SACI56780 SYN_03204SYN_03606SYN_02759SYN_03204
RSPH349102 RSPH17025_0555RSPH17025_1236RSPH17025_1500
RSPH349101 RSPH17029_2329RSPH17029_2202RSPH17029_1443
RSPH272943 RSP_0675RSP_0551RSP_2850
RSP357808 ROSERS_0316ROSERS_3232ROSERS_3660ROSERS_0316
RSOL267608 RSC1787RSC1784RSC1642
RRUB269796 RRU_A1700RRU_A1703RRU_A1726RRU_A1700
RPOM246200 SPO_2742SPO_2740SPO_2074SPO_2742
RPAL316058 RPB_2682RPB_2679RPB_2850RPB_2682
RPAL316057 RPD_2718RPD_2715RPD_2622RPD_2718
RPAL316056 RPC_2706RPC_2703RPC_2610RPC_2706
RPAL316055 RPE_2868RPE_2865RPE_2790RPE_2868
RPAL258594 RPA2778RPA2775RPA2663RPA2778
RMET266264 RMET_1825RMET_1828RMET_1955
RLEG216596 RL2472RL2476RL2386RL2472
RFER338969 RFER_2258RFER_2255RFER_1331
REUT381666 H16_A1573H16_A1569H16_A1455
REUT264198 REUT_A1437REUT_A1434REUT_A1360
RETL347834 RHE_CH02156RHE_CH02160RHE_CH02095
RDEN375451 RD1_3468RD1_3466RD1_2746
RCAS383372 RCAS_0246RCAS_3720RCAS_1478RCAS_0246
PTHE370438 PTH_0070PTH_0062PTH_0070
PSYR223283 PSPTO_3824PSPTO_3827PSPTO_2101PSPTO_2255
PSYR205918 PSYR_1655PSYR_1652PSYR_1896PSYR_2060
PSTU379731 PST_2614PST_2617PST_2657PST_2013
PSP56811 PSYCPRWF_1914PSYCPRWF_0126PSYCPRWF_1636
PSP312153 PNUC_0964PNUC_0966PNUC_0929
PPUT76869 PPUTGB1_1497PPUTGB1_1495PPUTGB1_1689PPUTGB1_1913
PPUT351746 PPUT_3793PPUT_3795PPUT_3594PPUT_3458
PPUT160488 PP_1967PP_2148PP_2311
PPRO298386 PBPRA1202PBPRA1200PBPRA2392PBPRA0122
PPEN278197 PEPE_0267PEPE_1481PEPE_1552PEPE_0267
PMUL272843 PM1675PM1673PM1041PM1675
PMEN399739 PMEN_1636PMEN_1633PMEN_1593PMEN_2443
PMAR93060 P9215_17551P9215_01471P9215_17551
PMAR74546 PMT9312_1579PMT9312_0132PMT9312_1579
PMAR59920 PMN2A_1017PMN2A_1496PMN2A_1017
PMAR167555 NATL1_18871NATL1_02021NATL1_18871
PMAR167546 P9301ORF_1709P9301ORF_0151P9301ORF_1709
PMAR167542 P9515ORF_1737P9515ORF_0165P9515ORF_1737
PMAR167540 PMM1486PMM0130PMM1486
PMAR146891 A9601_16901A9601_01471A9601_16901
PLUM243265 PLU2826PLU2828PLU2815PLU2826
PING357804 PING_1096PING_1094PING_2204PING_0317
PHAL326442 PSHAA1800PSHAA1803PSHAA1836PSHAA2933
PFLU220664 PFL_1803PFL_1801PFL_1954PFL_4286
PFLU216595 PFLU4698PFLU4700PFLU1565PFLU1688
PFLU205922 PFL_4149PFL_4152PFL_3866PFL_4021
PENT384676 PSEEN1627PSEEN1624PSEEN3715PSEEN1879
PCRY335284 PCRYO_1532PCRYO_0155PCRYO_1664
PCAR338963 PCAR_1695PCAR_1691PCAR_0091PCAR_1695
PATL342610 PATL_2115PATL_2117PATL_1725PATL_4217
PARC259536 PSYC_0890PSYC_0145PSYC_1484
PAER208964 PA2959PA2962PA3002PA2866
PAER208963 PA14_25780PA14_25740PA14_25230PA14_27020
OIHE221109 OB0047OB0036OB0063OB0047
OCAR504832 OCAR_6124OCAR_6127OCAR_6210OCAR_6124
OANT439375 OANT_2080OANT_3640OANT_2080
NWIN323098 NWI_1461NWI_1464NWI_1513NWI_1461
NOCE323261 NOC_1657NOC_1660NOC_1642
NMUL323848 NMUL_A1381NMUL_A1387NMUL_A0639
NMEN374833 NMCC_0735NMCC_0623NMCC_1194
NMEN272831 NMC0724NMC0619NMC1214
NMEN122587 NMA0982NMA0869NMA1491
NMEN122586 NMB_0771NMB_0670NMB_1281
NHAM323097 NHAM_2007NHAM_2010NHAM_2053NHAM_2007
NGON242231 NGO0349NGO0239NGO0623
NEUT335283 NEUT_1285NEUT_0536NEUT_0129
NEUR228410 NE1516NE2181NE0008
NARO279238 SARO_1938SARO_1941SARO_1982SARO_1938
MTHE264732 MOTH_0049MOTH_0042MOTH_0081MOTH_0049
MSUC221988 MS0571MS0569MS0216MS0571
MSP409 M446_6467M446_6278M446_6308M446_6467
MSP400668 MMWYL1_2265MMWYL1_2267MMWYL1_1709MMWYL1_2211
MSP266779 MESO_1584MESO_1581MESO_1702MESO_1584
MPET420662 MPE_A1857MPE_B0240MPE_A1569
MMAR394221 MMAR10_1454MMAR10_1485MMAR10_1452
MMAG342108 AMB2447AMB2450AMB2465AMB2447
MLOT266835 MLL0418MLL0424MLL0827MLL0418
MFLA265072 MFLA_1497MFLA_1500MFLA_1748MFLA_1914
MEXT419610 MEXT_4186MEXT_4191MEXT_4163MEXT_4186
MCAP243233 MCA_1993MCA_1996MCA_1864
MAQU351348 MAQU_3661MAQU_1862MAQU_1933
LWEL386043 LWE0154LWE2642LWE0176LWE0154
LSPH444177 BSPH_0059BSPH_0048BSPH_0075BSPH_0059
LSAK314315 LSA1657LSA0340LSA1604LSA1657
LREU557436 LREU_0211LREU_0330LREU_0262LREU_0211
LPNE400673 LPC_0818LPC_0815LPC_2333
LPNE297246 LPP1357LPP1354LPP1016
LPNE297245 LPL1353LPL1350LPL0983
LPNE272624 LPG1402LPG1399LPG0954
LPLA220668 LP_0703LP_0539LP_0456
LMON265669 LMOF2365_0196LMOF2365_2672LMOF2365_0225LMOF2365_0196
LMON169963 LMO0185LMO2693LMO0214LMO0185
LMES203120 LEUM_1615LEUM_0279LEUM_0399LEUM_1615
LLAC272623 L87336L3846L0263L87336
LLAC272622 LACR_0715LACR_0445LACR_0011LACR_0715
LJOH257314 LJ_0203LJ_0427LJ_0277
LINN272626 LIN0224LIN2841LIN0246LIN0224
LDEL390333 LDB0343LDB1631LDB0363
LDEL321956 LBUL_0298LBUL_1511LBUL_0318
LCHO395495 LCHO_1881LCHO_1878LCHO_2006
LCAS321967 LSEI_2595LSEI_2259LSEI_2547LSEI_2595
LBRE387344 LVIS_0456LVIS_0604LVIS_0516LVIS_0456
LACI272621 LBA0214LBA0381LBA0273
KPNE272620 GKPORF_B0011GKPORF_B0009GKPORF_B0027GKPORF_B3688
JSP375286 MMA_1982MMA_1986MMA_1408
JSP290400 JANN_1275JANN_1277JANN_2322JANN_1275
ILOI283942 IL1333IL1336IL1520IL2367
HSOM228400 HSM_0516HSM_0514HSM_1578
HSOM205914 HS_1485HS_1487HS_1161
HNEP81032 HNE_1813HNE_1985HNE_1811
HMOD498761 HM1_0751HM1_0759HM1_0721HM1_0751
HINF71421 HI_0454HI_0456HI_1258HI_0454
HINF374930 CGSHIEE_00720CGSHIEE_00710CGSHIEE_04040CGSHIEE_00720
HINF281310 NTHI0581NTHI0586NTHI1906NTHI0581
HHAL349124 HHAL_0006HHAL_1257HHAL_0172
HDUC233412 HD_1936HD_1933HD_0975
HCHE349521 HCH_02416HCH_02148HCH_02683HCH_04446
HAUR316274 HAUR_0963HAUR_2656HAUR_0963
HARS204773 HEAR1400HEAR1396HEAR1914
GVIO251221 GLR0678GLL3837GLL2367
GURA351605 GURA_2510GURA_3153GURA_0140GURA_2510
GTHE420246 GTNG_0031GTNG_0023GTNG_0048GTNG_0031
GSUL243231 GSU_2489GSU_2229GSU_0017GSU_2489
GOXY290633 GOX0015GOX0018GOX0055
GMET269799 GMET_2464GMET_2318GMET_3547GMET_2464
GKAU235909 GK0032GK0024GK0048GK0032
GBET391165 GBCGDNIH1_1078GBCGDNIH1_1075GBCGDNIH1_0836
FTUL458234 FTA_0653FTA_1757FTA_0967
FTUL418136 FTW_0442FTW_0202FTW_1085
FTUL401614 FTN_1408FTN_1598FTN_1039
FTUL393115 FTF1439CFTF0117FTF0644C
FTUL393011 FTH_0623FTH_1601FTH_0897
FTUL351581 FTL_0620FTL_1660FTL_0917
FRANT FT.1441CTMKMFD
FPHI484022 FPHI_1278FPHI_1019FPHI_1551
FMAG334413 FMG_0545FMG_1129FMG_0481FMG_0545
ESP42895 ENT638_1615ENT638_1613ENT638_1629ENT638_3954
ELIT314225 ELI_06230ELI_06215ELI_05115ELI_06230
EFER585054 EFER_1827EFER_1829EFER_1278EFER_3641
EFAE226185 EF_0934EF_2764EF_0257EF_0934
ECOO157 YCFHTMKMFDTATD
ECOL83334 ECS1478ECS1476ECS1492ECS4769
ECOL585397 ECED1_1243ECED1_1241ECED1_1257ECED1_4543
ECOL585057 ECIAI39_2061ECIAI39_2063ECIAI39_2046ECIAI39_3156
ECOL585056 ECUMN_1277ECUMN_1275ECUMN_1292ECUMN_4365
ECOL585055 EC55989_1212EC55989_1210EC55989_1226EC55989_4316
ECOL585035 ECS88_1114ECS88_1112ECS88_1128ECS88_4289
ECOL585034 ECIAI1_1135ECIAI1_1133ECIAI1_1151ECIAI1_4034
ECOL481805 ECOLC_2501ECOLC_2503ECOLC_2487ECOLC_4169
ECOL469008 ECBD_2501ECBD_2503ECBD_2487ECBD_4184
ECOL439855 ECSMS35_2027ECSMS35_2029ECSMS35_2012ECSMS35_4223
ECOL413997 ECB_01096ECB_01094ECB_01110ECB_03732
ECOL409438 ECSE_1164ECSE_1162ECSE_1179ECSE_4127
ECOL405955 APECO1_181APECO1_179APECO1_195APECO1_2616
ECOL364106 UTI89_C1227UTI89_C1225UTI89_C1242UTI89_C4426
ECOL362663 ECP_1092ECP_1090ECP_1106ECP_4054
ECOL331111 ECE24377A_1221ECE24377A_1219ECE24377A_1236ECE24377A_4361
ECOL316407 ECK1086:JW1086:B1100ECK1084:JW1084:B1098ECK1100:JW1100:B1114ECK3833:JW5931:B4483
ECOL199310 C1372C1370C1389C4788
ECAR218491 ECA1804ECA1802ECA1821ECA0202
DSP255470 CBDBA752CBDBA1211CBDBA887
DSP216389 DEHABAV1_0704DEHABAV1_1092DEHABAV1_0818
DSHI398580 DSHI_0920DSHI_0922DSHI_1561
DRED349161 DRED_0066DRED_0059DRED_0111DRED_0066
DPSY177439 DP2779DP0282DP2779
DOLE96561 DOLE_1165DOLE_1705DOLE_0315
DNOD246195 DNO_1213DNO_0689DNO_0727
DHAF138119 DSY0129DSY0189DSY0129
DARO159087 DARO_2194DARO_2197DARO_1965
CVIO243365 CV_3720CV_3723CV_1146CV_3720
CVES412965 COSY_0077COSY_0214COSY_0922
CSP78 CAUL_2699CAUL_2619CAUL_2697
CSP501479 CSE45_1081CSE45_2688CSE45_1943CSE45_1081
CSAL290398 CSAL_1609CSAL_1606CSAL_1567CSAL_2399
CRUT413404 RMAG_0071RMAG_0220RMAG_1021
CPSY167879 CPS_2305CPS_2302CPS_2139CPS_0167
CPER289380 CPR_2529CPR_2493CPR_2529
CPER195103 CPF_2843CPF_2807CPF_2843
CPER195102 CPE2520CPE2484CPE2520
CNOV386415 NT01CX_0686NT01CX_0761NT01CX_1020NT01CX_0686
CKLU431943 CKL_3765CKL_0152CKL_3765
CJAP155077 CJA_1986CJA_1993CJA_1764CJA_1986
CHYD246194 CHY_0050CHY_0200CHY_2620
CDES477974 DAUD_0042DAUD_0036DAUD_0072DAUD_0042
CBUR434922 COXBU7E912_1574COXBU7E912_1577COXBU7E912_1246
CBUR360115 COXBURSA331_A0611COXBURSA331_A0608COXBURSA331_A1299
CBUR227377 CBU_0502CBU_0499CBU_1148
CBOT508765 CLL_A0113CLL_A0152CLL_A0113
CAULO CC1824CC1844CC1822
CACE272562 CAC2989CAC3216CAC2989
BWEI315730 BCERKBAB4_0034BCERKBAB4_0048BCERKBAB4_0034
BVIE269482 BCEP1808_1815BCEP1808_1817BCEP1808_1871
BTRI382640 BT_1168BT_1197BT_1168
BTHU412694 BALH_0035BALH_0026BALH_0048BALH_0035
BTHU281309 BT9727_0035BT9727_0048BT9727_0035
BTHA271848 BTH_I2157BTH_I2154BTH_I2088
BSUI470137 BSUIS_A1040BSUIS_A1036BSUIS_B0575BSUIS_A1040
BSUI204722 BR_0996BR_0992BR_A0579BR_0996
BSUB BSU00390BSU00280BSU00550BSU00390
BSP376 BRADO3830BRADO3827BRADO3771BRADO3830
BSP36773 BCEP18194_A5191BCEP18194_A5193BCEP18194_A5255
BSP107806 BU355BU353BU294
BQUI283165 BQ06080BQ05840BQ06080
BPUM315750 BPUM_0023BPUM_0012BPUM_0039BPUM_0023
BPSE320373 BURPS668_2278BURPS668_2281BURPS668_2359
BPSE272560 BPSL1439BPSL1436BPSL2100
BPET94624 BPET2502BPET2504BPET1694
BPER257313 BP1849BP1847BP0864
BPAR257311 BPP1561BPP1559BPP3367
BOVI236 GBOORF0992GBOORF0989GBOORFA0597GBOORF0992
BMEL359391 BAB1_1015BAB1_1011BAB2_0661BAB1_1015
BMEL224914 BMEI0986BMEI0989BMEII0688BMEI0986
BMAL320389 BMA10247_1186BMA10247_1189BMA10247_1260
BMAL320388 BMASAVP1_A1913BMASAVP1_A1916BMASAVP1_A1988
BMAL243160 BMA_1422BMA_1425BMA_1491
BLIC279010 BL00532BL02509BL00515BL00532
BJAP224911 BLL4515BLL4518BLL4601BLL4515
BHEN283166 BH08490BH08750BH08490
BHAL272558 BH0054BH0042BH0069BH0054
BCLA66692 ABC0067ABC0050ABC0083ABC0067
BCER572264 BCA_0048BCA_0039BCA_0063BCA_0048
BCER405917 BCE_0037BCE_0051BCE_0037
BCER315749 BCER98_0034BCER98_0025BCER98_0048BCER98_0034
BCER288681 BCE33L0035BCE33L0048BCE33L0035
BCER226900 BC_0044BC_0036BC_0058BC_0044
BCEN331272 BCEN2424_1891BCEN2424_1893BCEN2424_1944
BCEN331271 BCEN_6188BCEN_6186BCEN_6135
BCAN483179 BCAN_A1013BCAN_A1009BCAN_B0579BCAN_A1013
BBRO257310 BB2639BB2637BB3818
BBAC360095 BARBAKC583_0819BARBAKC583_0798BARBAKC583_0819
BBAC264462 BD1042BD1040BD3893BD1042
BANT592021 BAA_0048BAA_0039BAA_0063BAA_0048
BANT568206 BAMEG_0048BAMEG_0039BAMEG_0063BAMEG_0048
BANT261594 GBAA0037GBAA0027GBAA0052GBAA0037
BANT260799 BAS0038BAS0029BAS0052BAS0038
BAMY326423 RBAM_000480RBAM_000370RBAM_000640RBAM_000480
BAMB398577 BAMMC406_1800BAMMC406_1802BAMMC406_1859
BAMB339670 BAMB_1828BAMB_1830BAMB_1932
BABO262698 BRUAB1_1002BRUAB1_0998BRUAB2_0645BRUAB1_1002
AVAR240292 AVA_4206AVA_1962AVA_4206
ASP76114 EBA5421EBA5415EBA6555EBA5421
ASP62977 ACIAD2359ACIAD2588ACIAD1395
ASP62928 AZO1598AZO1595AZO1673AZO1697
ASP232721 AJS_1720AJS_1717AJS_3157
ASAL382245 ASA_2047ASA_2049ASA_1881ASA_4303
APLE434271 APJL_1846APJL_1853APJL_1357
APLE416269 APL_1810APL_1817APL_1339
AORE350688 CLOS_2661CLOS_0060CLOS_2642CLOS_2661
AMET293826 AMET_0111AMET_0082AMET_0160AMET_0111
AMAR329726 AM1_3591AM1_6041AM1_4147AM1_3591
AHYD196024 AHA_2258AHA_2256AHA_2003AHA_0090
AFER243159 AFE_2055AFE_1174AFE_2663AFE_2055
AEHR187272 MLG_1416MLG_1800MLG_1579
ADEH290397 ADEH_1315ADEH_4332ADEH_1315
ACRY349163 ACRY_0906ACRY_1754ACRY_0906
ACEL351607 ACEL_0176ACEL_1971ACEL_1913ACEL_0176
ACAU438753 AZC_2178AZC_2173AZC_1221AZC_2178
ABOR393595 ABO_1077ABO_1074ABO_1028ABO_1007
ABAU360910 BAV1766BAV1764BAV1061
ABAC204669 ACID345_2029ACID345_3227ACID345_4549ACID345_2029
AAVE397945 AAVE_3409AAVE_3412AAVE_1580
AAEO224324 AQ_2060AQ_969AQ_2060


Organism features enriched in list (features available for 352 out of the 376 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00011227192
Arrangment:Pairs 0.000312783112
Arrangment:Singles 5.169e-6147286
Disease:Pneumonia 0.00217601212
Disease:Wide_range_of_infections 0.00365001111
Endospores:No 8.535e-1093211
GC_Content_Range4:0-40 0.0001041108213
GC_Content_Range4:40-60 0.0001788155224
GC_Content_Range7:0-30 2.513e-12647
GC_Content_Range7:50-60 0.000046682107
GC_Content_Range7:70-100 0.0045192211
Genome_Size_Range5:0-2 3.613e-1454155
Genome_Size_Range5:4-6 4.276e-8140184
Genome_Size_Range9:0-1 5.431e-9227
Genome_Size_Range9:1-2 1.665e-752128
Genome_Size_Range9:4-5 0.00020247396
Genome_Size_Range9:5-6 0.00035846788
Gram_Stain:Gram_Neg 1.709e-6228333
Habitat:Host-associated 6.865e-6100206
Habitat:Multiple 8.726e-7133178
Habitat:Specialized 0.00170982253
Motility:No 0.000620375151
Motility:Yes 0.0018450177267
Optimal_temp.:- 0.0042117169257
Optimal_temp.:25-35 0.00735121314
Optimal_temp.:35-37 0.00129571313
Optimal_temp.:37 7.070e-644106
Oxygen_Req:Aerobic 0.005115999185
Oxygen_Req:Anaerobic 1.228e-738102
Oxygen_Req:Facultative 1.182e-18169201
Shape:Coccobacillus 0.00365001111
Shape:Coccus 0.00651795982
Shape:Irregular_coccus 2.818e-6117
Shape:Rod 2.116e-6236347
Shape:Sphere 0.0000617319
Shape:Spiral 2.024e-8534
Temp._range:Hyperthermophilic 0.0001196523



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 160
Effective number of orgs (counting one per cluster within 468 clusters): 131

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278151
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP101510 ncbi Rhodococcus jostii RHA11
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
NSP387092 ncbi Nitratiruptor sp. SB155-21
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GFOR411154 ncbi Gramella forsetii KT08031
FSP106370 ncbi Frankia sp. CcI31
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40180


Names of the homologs of the genes in the group in each of these orgs
  EG12303   EG12302   EG11619   EG11481   
WSUC273121
WPIP955 WD_1120
WPIP80849 WB_0380
UURE95667 UU017
UURE95664 UUR10_0017
UPAR505682 UPA3_0017
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA1607
TTHE262724 TT_C1243
TPEN368408
TPAL243276
TKOD69014
TDEN243275
TACI273075
STOK273063
SSOL273057
SMAR399550
SACI330779
RTYP257363 RT0677
RSP101510 RHA1_RO05760
RRIC452659 RRIOWA_1246
RRIC392021 A1G_05805
RPRO272947 RP682
RMAS416276 RMA_1080
RFEL315456 RF_0236
RCON272944 RC1045
RCAN293613 A1E_04535
RBEL391896 A1I_06685
RBEL336407 RBE_0239
RAKA293614 A1C_05325
PTOR263820
PRUM264731 GFRORF1824
PISL384616
PINT246198 PIN_0244
PHOR70601
PGIN242619
PFUR186497 PF1730
PDIS435591
PAST100379 PAM605
PARS340102
PAER178306
PABY272844 PAB0319
NSP387092 NIS_0774
NPHA348780
NFAR247156 NFA48750
MVAN350058 MVAN_4777
MTUB419947
MTUB336982
MTHE349307 MTHE_1299
MTHE187420
MTBRV
MTBCDC
MSYN262723 MS53_0052
MSTA339860 MSP_0974
MSP189918 MKMS_4331
MSP164757 MJLS_4624
MSP164756 MMCS_4245
MSME246196 MSMEG_5423
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632 MSC_0046
MMOB267748
MMAZ192952
MMAR444158 MMARC6_1100
MMAR426368 MMARC7_0817
MMAR402880 MMARC5_0006
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311 MFL676
MCAP340047 MCAP_0010
MBUR259564
MBOV410289
MBOV233413
MBAR269797 MBAR_A0943
MAVI243243
MART243272
MAEO419665 MAEO_1279
MACE188937 MA4616
MABS561007 MAB_1157
LXYL281090 LXX04070
LINT363253 LI0760
LINT267671 LIC_13481
LINT189518 LA4339
LBOR355277 LBJ_0025
LBOR355276 LBL_2979
LBIF456481 LEPBI_I3468
LBIF355278 LBF_3353
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279 HH_1322
HBUT415426
HACI382638
GFOR411154 GFO_0084
FSP106370 FRANCCI3_3926
FJOH376686 FJOH_4741
ERUM302409 ERGA_CDS_03030
ERUM254945 ERWE_CDS_03080
DVUL882 DVU_2140
CSUL444179
CPNE182082 CPB0280
CPNE138677 CPJ0273
CPNE115713 CPN0273
CPNE115711 CP_0486
CPHY357809 CPHY_3900
CMIC443906 CMM_0928
CMIC31964 CMS0188
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0603
CJEJ360109 JJD26997_1355
CJEJ354242 CJJ81176_0672
CJEJ195099 CJE_0747
CJEJ192222 CJ0644
CJEI306537
CHUT269798
CHOM360107 CHAB381_0299
CGLU196627 CG1099
CEFF196164 CE1034
CDIP257309
BXEN266265
BTUR314724
BTHE226186
BPSE320372
BHER314723
BGAR290434
BFRA295405
BFRA272559
BBUR224326
BAPH372461 BCC_220
BAFZ390236
AYEL322098 AYWB_140
AURANTIMONAS
APHA212042 APH_0528
APER272557
ALAI441768 ACL_0189
AFUL224325
ABUT367737


Organism features enriched in list (features available for 153 out of the 160 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0000177992
Arrangment:Pairs 6.050e-612112
Arrangment:Singles 0.000248593286
Disease:Leptospirosis 0.004606944
Endospores:No 1.469e-1698211
Endospores:Yes 8.906e-6253
GC_Content_Range4:0-40 0.000322173213
GC_Content_Range4:40-60 0.003525346224
GC_Content_Range7:0-30 7.089e-62647
GC_Content_Range7:50-60 0.000169714107
Genome_Size_Range5:0-2 1.031e-1681155
Genome_Size_Range5:2-4 0.005141940197
Genome_Size_Range5:4-6 5.581e-823184
Genome_Size_Range9:0-1 9.573e-71927
Genome_Size_Range9:1-2 3.921e-1062128
Genome_Size_Range9:4-5 0.00140941496
Genome_Size_Range9:5-6 0.0000463988
Gram_Stain:Gram_Neg 0.000044067333
Gram_Stain:Gram_Pos 0.004038828150
Habitat:Host-associated 0.000335771206
Habitat:Multiple 0.000015627178
Habitat:Specialized 0.00208522353
Motility:No 0.002722252151
Optimal_temp.:37 0.000026145106
Optimal_temp.:85 0.004606944
Oxygen_Req:Aerobic 0.008838059185
Oxygen_Req:Anaerobic 0.000050943102
Oxygen_Req:Facultative 1.907e-924201
Shape:Coccus 0.00140591182
Shape:Irregular_coccus 8.868e-81517
Shape:Rod 4.843e-863347
Shape:Sphere 1.167e-71619
Shape:Spiral 3.119e-92534
Temp._range:Hyperthermophilic 1.286e-61723
Temp._range:Mesophilic 0.0090180115473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)5193670.4731
PWY-5386 (methylglyoxal degradation I)3052540.4590
GLUT-REDOX-PWY (glutathione redox reactions II)2462160.4533
ARO-PWY (chorismate biosynthesis I)5103610.4530
PROSYN-PWY (proline biosynthesis I)4753450.4497
PWY-5686 (uridine-5'-phosphate biosynthesis)5263670.4484
THISYN-PWY (thiamin biosynthesis I)5023570.4481
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392720.4441
FASYN-ELONG-PWY (fatty acid elongation -- saturated)5213630.4306
PWY-841 (purine nucleotides de novo biosynthesis II)4983530.4297
PWY0-862 (cis-dodecenoyl biosynthesis)3432710.4221
GLYCOCAT-PWY (glycogen degradation I)2462100.4131
PWY-5918 (heme biosynthesis I)2722260.4091
PWY-6124 (inosine-5'-phosphate biosynthesis II)5353660.4062
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4583310.4059
P163-PWY (lysine fermentation to acetate and butyrate)3672820.4035
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181900.4020
VALDEG-PWY (valine degradation I)2902360.4011



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12302   EG11619   EG11481   
EG123030.9998730.9992770.999931
EG123020.998960.999275
EG116190.998585
EG11481



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PAIRWISE BLAST SCORES:

  EG12303   EG12302   EG11619   EG11481   
EG123030.0f0---
EG12302-0.0f0--
EG11619--0.0f0-
EG11481---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG12302 EG12303 (centered at EG12303)
EG11481 (centered at EG11481)
EG11619 (centered at EG11619)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12303   EG12302   EG11619   EG11481   
417/623410/623413/623356/623
AAEO224324:0:Tyes7730-773
AAUR290340:2:Tyes-0461-
AAVE397945:0:Tyes179718000-
ABAC204669:0:Tyes0120525450
ABAU360910:0:Tyes7057030-
ABOR393595:0:Tyes7067210
ACAU438753:0:Tyes9699640969
ACEL351607:0:Tyes0179217340
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