CANDIDATE ID: 852

CANDIDATE ID: 852

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9928917e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11651 (yafE) (b0210)
   Products of gene:
     - EG11651-MONOMER (predicted S-adenosylmethionine-dependent methyltransferase)

- EG11476 (ubiB) (b3835)
   Products of gene:
     - 2-OCTAPRENYLPHENOL-HYDROX-MONOMER (2-octaprenylphenol hydroxylase)
       Reactions:
        2-octaprenylphenol + oxygen + 2 H+  ->  2-octaprenyl-6-hydroxyphenol + H2O
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))

- EG11474 (yigP) (b3834)
   Products of gene:
     - EG11474-MONOMER (conserved protein)

- EG11473 (ubiE) (b3833)
   Products of gene:
     - 2-OCTAPRENYL-METHOXY-BENZOQ-METH-MONOMER (bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase)
       Reactions:
        demethylmenaquinol-8 + S-adenosyl-L-methionine  ->  menaquinol-8 + S-adenosyl-L-homocysteine + H+
         In pathways
         PWY-5838 (superpathway of menaquinone-8 biosynthesis I)
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         MENAQUINONESYN-PWY (menaquinone-8 biosynthesis)
        2-octaprenyl-6-methoxy-1,4-benzoquinol + S-adenosyl-L-methionine  ->  2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol + S-adenosyl-L-homocysteine + H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         PWY-5870 (PWY-5870)
         UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 181
Effective number of orgs (counting one per cluster within 468 clusters): 121

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
XAUT78245 ncbi Xanthobacter autotrophicus Py23
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106333
VFIS312309 ncbi Vibrio fischeri ES1143
VCHO345073 ncbi Vibrio cholerae O3953
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169613
TTUR377629 ncbi Teredinibacter turnerae T79013
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252593
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP94122 ncbi Shewanella sp. ANA-34
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SRUB309807 ncbi Salinibacter ruber DSM 138553
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans3
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB3
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63013
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-403
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99413
RSP357808 ncbi Roseiflexus sp. RS-13
RSP101510 ncbi Rhodococcus jostii RHA13
RMET266264 ncbi Ralstonia metallidurans CH343
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38413
RFER338969 ncbi Rhodoferax ferrireducens T1183
REUT381666 ncbi Ralstonia eutropha H163
REUT264198 ncbi Ralstonia eutropha JMP1343
RCAS383372 ncbi Roseiflexus castenholzii DSM 139413
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30003
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a3
PSTU379731 ncbi Pseudomonas stutzeri A15013
PSP296591 ncbi Polaromonas sp. JS6663
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24403
PPRO298386 ncbi Photobacterium profundum SS93
PNAP365044 ncbi Polaromonas naphthalenivorans CJ23
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO13
PING357804 ncbi Psychromonas ingrahamii 373
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L483
PCAR338963 ncbi Pelobacter carbinolicus DSM 23803
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-43
PAER208964 ncbi Pseudomonas aeruginosa PAO13
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA143
OIHE221109 ncbi Oceanobacillus iheyensis HTE8313
NSP103690 ncbi Nostoc sp. PCC 71203
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MXAN246197 ncbi Myxococcus xanthus DK 16223
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSP409 Methylobacterium sp.3
MSP266779 ncbi Chelativorans sp. BNC13
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MEXT419610 ncbi Methylobacterium extorquens PA13
MAQU351348 ncbi Marinobacter aquaeolei VT83
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP290400 ncbi Jannaschia sp. CCS13
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HHAL349124 ncbi Halorhodospira halophila SL13
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237793
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-23
GKAU235909 ncbi Geobacillus kaustophilus HTA4263
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL351581 Francisella tularensis holarctica FSC2003
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25943
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DSHI398580 ncbi Dinoroseobacter shibae DFL 123
DHAF138119 ncbi Desulfitobacterium hafniense Y513
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C3
BVIE269482 ncbi Burkholderia vietnamiensis G43
BTHA271848 ncbi Burkholderia thailandensis E2643
BSP36773 Burkholderia sp.3
BPSE320373 ncbi Burkholderia pseudomallei 6683
BPSE320372 ncbi Burkholderia pseudomallei 1710b3
BPSE272560 ncbi Burkholderia pseudomallei K962433
BPET94624 Bordetella petrii3
BPER257313 ncbi Bordetella pertussis Tohama I3
BPAR257311 ncbi Bordetella parapertussis 128223
BMAL320389 ncbi Burkholderia mallei NCTC 102473
BMAL320388 ncbi Burkholderia mallei SAVP13
BMAL243160 ncbi Burkholderia mallei ATCC 233443
BHAL272558 ncbi Bacillus halodurans C-1253
BCLA66692 ncbi Bacillus clausii KSM-K163
BCER405917 Bacillus cereus W3
BCEN331272 ncbi Burkholderia cenocepacia HI24243
BCEN331271 ncbi Burkholderia cenocepacia AU 10543
BBRO257310 ncbi Bordetella bronchiseptica RB503
BAMB398577 ncbi Burkholderia ambifaria MC40-63
BAMB339670 ncbi Burkholderia ambifaria AMMD3
AVAR240292 ncbi Anabaena variabilis ATCC 294133
ASP62977 ncbi Acinetobacter sp. ADP13
ASP62928 ncbi Azoarcus sp. BH723
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AHYD196024 Aeromonas hydrophila dhakensis3
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232703
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ACAU438753 ncbi Azorhizobium caulinodans ORS 5713
ABAU360910 ncbi Bordetella avium 197N3
AAUR290340 ncbi Arthrobacter aurescens TC13


Names of the homologs of the genes in the group in each of these orgs
  EG11651   EG11476   EG11474   EG11473   
YPSE349747 YPSIP31758_3145YPSIP31758_0273YPSIP31758_0272YPSIP31758_0271
YPSE273123 YPTB0908YPTB0257YPTB0256YPTB0255
YPES386656 YPDSF_2846YPDSF_3396YPDSF_3397YPDSF_3398
YPES377628 YPN_0876YPN_0185YPN_0184YPN_0183
YPES360102 YPA_2709YPA_0245YPA_0244YPA_0243
YPES349746 YPANGOLA_A3296YPANGOLA_A3639YPANGOLA_A3640YPANGOLA_A3641
YPES214092 YPO3218YPO3779YPO3780YPO3781
YPES187410 Y0970Y0451Y0450Y0449
YENT393305 YE3193YE0258YE0257YE0256
XORY360094 XOOORF_4465XOOORF_5038XOOORF_0909
XORY342109 XOO0859XOO0322XOO3758
XORY291331 XOO0939XOO0350XOO3987
XCAM487884 XCC-B100_0868XCC-B100_0246XCC-B100_0709
XCAM316273 XCAORF_3662XCAORF_4299XCAORF_3822
XCAM314565 XC_0835XC_0234XC_0673
XCAM190485 XCC3329XCC0224XCC3488
XAXO190486 XAC1561XAC0242XAC0643
XAUT78245 XAUT_0336XAUT_2017XAUT_2016
VVUL216895 VV1_2941VV1_0907VV1_0908VV1_0909
VVUL196600 VV1329VV0179VV0178VV0177
VPAR223926 VP0097VP0096VP0095
VFIS312309 VF0048VF0047VF0046
VCHO345073 VC0395_A2430VC0395_A2431VC0395_A2432
VCHO VC0085VC0084VC0083
TTUR377629 TERTU_3278TERTU_3597TERTU_3595
TDEN292415 TBD_2758TBD_0213TBD_0215
STYP99287 STM0259STM3972STM3971STM3970
SSP94122 SHEWANA3_3725SHEWANA3_3727SHEWANA3_3726SHEWANA3_3725
SSP321332 CYB_2396CYB_0946CYB_0364
SSON300269 SSO_0224SSO_4010SSO_4009SSO_4008
SSED425104 SSED_4096SSED_4098SSED_4097SSED_4096
SRUB309807 SRU_0824SRU_2686SRU_0824
SPRO399741 SPRO_1008SPRO_0250SPRO_0249SPRO_0248
SPEA398579 SPEA_3792SPEA_3794SPEA_3793SPEA_3792
SONE211586 SO_4199SO_4201SO_4200SO_4199
SLOI323850 SHEW_3373SHEW_3375SHEW_3374SHEW_3373
SHIGELLA YAFEYIGRYIGPUBIE
SHAL458817 SHAL_3879SHAL_3881SHAL_3880SHAL_3879
SGLO343509 SG0111SG0110SG0109
SFUM335543 SFUM_1190SFUM_1817SFUM_3273
SFLE373384 SFV_0194SFV_3663SFV_3664SFV_3665
SFLE198214 AAN41858.1AAN45348.1AAN45347.1AAN45346.1
SENT454169 SEHA_C0297SEHA_C4299SEHA_C4298SEHA_C4297
SENT321314 SCH_0255SCH_3870SCH_3869SCH_3868
SENT295319 SPA2510SPA3813SPA3812SPA3811
SENT220341 STY0280STY3587STY3588STY3589
SENT209261 T2606T3325T3326T3327
SELO269084 SYC0147_CSYC0672_CSYC0450_D
SDYS300267 SDY_0229SDY_3908SDY_3909SDY_3910
SDEN318161 SDEN_0461SDEN_0459SDEN_0460SDEN_0461
SDEG203122 SDE_2702SDE_2701SDE_2700
SBOY300268 SBO_0199SBO_3849SBO_3848SBO_3847
SBAL402882 SHEW185_0419SHEW185_0417SHEW185_0418SHEW185_0419
SBAL399599 SBAL195_0431SBAL195_0429SBAL195_0430SBAL195_0431
RXYL266117 RXYL_0600RXYL_1337RXYL_1973
RSP357808 ROSERS_0400ROSERS_0578ROSERS_2185
RSP101510 RHA1_RO04166RHA1_RO02440RHA1_RO01993
RMET266264 RMET_0529RMET_0374RMET_0371
RLEG216596 RL0814RL0370RL0371
RFER338969 RFER_3515RFER_1294RFER_1291
REUT381666 H16_A0600H16_A0448H16_A0445
REUT264198 REUT_A0587REUT_A0434REUT_A0431
RCAS383372 RCAS_2312RCAS_0631RCAS_1295
PSYR223283 PSPTO_5152PSPTO_5151PSPTO_5150
PSYR205918 PSYR_0387PSYR_0388PSYR_0389
PSTU379731 PST_0338PST_0339PST_0340
PSP296591 BPRO_3308BPRO_0863BPRO_0860
PPUT76869 PPUTGB1_1518PPUTGB1_5063PPUTGB1_5062PPUTGB1_5061
PPUT351746 PPUT_3772PPUT_4887PPUT_4886PPUT_4885
PPUT160488 PP_1987PP_5012PP_5011
PPRO298386 PBPRA0118PBPRA0117PBPRA0116
PNAP365044 PNAP_0781PNAP_0784PNAP_0781
PMUL272843 PM1686PM1688PM1687PM1686
PMEN399739 PMEN_0523PMEN_0521PMEN_0522PMEN_0523
PLUM243265 PLU4411PLU4412PLU4413
PING357804 PING_0321PING_0322PING_0323
PHAL326442 PSHAA2926PSHAA2928PSHAA2927PSHAA2926
PFLU220664 PFL_2065PFL_0425PFL_0426PFL_0427
PFLU216595 PFLU4194PFLU0387PFLU0388PFLU0389
PFLU205922 PFL_1891PFL_0385PFL_0386PFL_0387
PENT384676 PSEEN5075PSEEN5074PSEEN5073
PCAR338963 PCAR_1066PCAR_2342PCAR_2359
PATL342610 PATL_4209PATL_4211PATL_4210PATL_4209
PARC259536 PSYC_0713PSYC_0711PSYC_0713
PAER208964 PA3119PA5065PA5063
PAER208963 PA14_23770PA14_66920PA14_66900
OIHE221109 OB1496OB1309OB1789
NSP103690 ALL7630ALR4515ALR5252
NOCE323261 NOC_2926NOC_2345NOC_2344NOC_2343
NMUL323848 NMUL_A0988NMUL_A0989NMUL_A2269
NARO279238 SARO_2319SARO_0594SARO_0595
MXAN246197 MXAN_0408MXAN_3899MXAN_3525
MTHE264732 MOTH_1280MOTH_0233MOTH_1280
MSP409 M446_2361M446_6251M446_6252
MSP266779 MESO_2088MESO_4090MESO_4089
MMAG342108 AMB0315AMB0630AMB0631
MEXT419610 MEXT_4752MEXT_3928MEXT_3929
MAQU351348 MAQU_3415MAQU_3417MAQU_3415
LPNE400673 LPC_3203LPC_3206LPC_3204LPC_3203
LPNE297246 LPP2970LPP2972LPP2971LPP2970
LPNE297245 LPL2818LPL2820LPL2819LPL2818
LPNE272624 LPG2903LPG2905LPG2904LPG2903
KPNE272620 GKPORF_B4515GKPORF_B3683GKPORF_B3682GKPORF_B3681
JSP290400 JANN_4209JANN_4208JANN_4209
ILOI283942 IL2373IL2371IL2372IL2373
HSOM228400 HSM_1655HSM_1657HSM_1656HSM_1655
HSOM205914 HS_0542HS_0544HS_0543HS_0542
HHAL349124 HHAL_1207HHAL_1206HHAL_1205
HDUC233412 HD_0719HD_0717HD_0718HD_0719
HCHE349521 HCH_01082HCH_01080HCH_01081HCH_01082
HAUR316274 HAUR_0110HAUR_4721HAUR_4330
GTHE420246 GTNG_2145GTNG_1650GTNG_2145
GKAU235909 GK2211GK1754GK2211
FTUL418136 FTW_1051FTW_0749FTW_0751
FTUL393115 FTF0677CFTF1298FTF1296
FTUL351581 FTL_0953FTL_0407FTL_0405
FRANT FT.0678CUBIBUBIE
FPHI484022 FPHI_0382FPHI_0384FPHI_0382
ESP42895 ENT638_0744ENT638_3958ENT638_3959ENT638_3960
ELIT314225 ELI_10100ELI_10545ELI_10550
EFER585054 EFER_0239EFER_3645EFER_3646EFER_3647
ECOO157 Z0233YIGRYIGPUBIE
ECOL83334 ECS0206ECS4765ECS4764ECS4763
ECOL585397 ECED1_0215ECED1_4539ECED1_4538ECED1_4537
ECOL585057 ECIAI39_0439ECIAI39_3160ECIAI39_3161ECIAI39_3162
ECOL585056 ECUMN_0207ECUMN_4361ECUMN_4360ECUMN_4359
ECOL585055 EC55989_0209EC55989_4312EC55989_4311EC55989_4310
ECOL585035 ECS88_0225ECS88_4285ECS88_4284ECS88_4283
ECOL585034 ECIAI1_0218ECIAI1_4030ECIAI1_4029ECIAI1_4028
ECOL481805 ECOLC_3455ECOLC_4173ECOLC_4174ECOLC_4175
ECOL469008 ECBD_3414ECBD_4188ECBD_4189ECBD_4190
ECOL439855 ECSMS35_0224ECSMS35_4218ECSMS35_4217ECSMS35_4216
ECOL413997 ECB_00203ECB_03728ECB_03727ECB_03726
ECOL409438 ECSE_0206ECSE_4123ECSE_4122ECSE_4121
ECOL405955 APECO1_1780APECO1_2620APECO1_2621APECO1_2622
ECOL364106 UTI89_C0229UTI89_C4422UTI89_C4421UTI89_C4420
ECOL362663 ECP_0216ECP_4050ECP_4049ECP_4048
ECOL331111 ECE24377A_0215ECE24377A_4356ECE24377A_4355ECE24377A_4354
ECOL316407 ECK0210:JW0200:B0210ECK3829:JW3812:B3835ECK3828:JW3811:B3834ECK3827:JW5581:B3833
ECOL199310 C0247C4784C4783C4782
ECAR218491 ECA3470ECA0198ECA0197ECA0196
DSHI398580 DSHI_3368DSHI_3367DSHI_3368
DHAF138119 DSY2329DSY2082DSY1907
CSAL290398 CSAL_0597CSAL_0595CSAL_0596CSAL_0597
CPSY167879 CPS_0294CPS_0296CPS_0295CPS_0294
CKLU431943 CKL_2432CKL_3479CKL_1495
CJAP155077 CJA_0102CJA_3645CJA_3644CJA_3643
CHYD246194 CHY_0555CHY_1218CHY_1809
CDES477974 DAUD_1458DAUD_1733DAUD_1087
BVIE269482 BCEP1808_2511BCEP1808_2835BCEP1808_2838
BTHA271848 BTH_I0870BTH_I0556BTH_I0553
BSP36773 BCEP18194_A5754BCEP18194_A6056BCEP18194_A6059
BPSE320373 BURPS668_1068BURPS668_0670BURPS668_0667
BPSE320372 BURPS1710B_A1283BURPS1710B_A0897BURPS1710B_A0894
BPSE272560 BPSL1012BPSL0640BPSL0637
BPET94624 BPET0495BPET0484BPET0482
BPER257313 BP3838BP0164BP0161
BPAR257311 BPP3982BPP3992BPP3995
BMAL320389 BMA10247_1602BMA10247_2401BMA10247_2398
BMAL320388 BMASAVP1_A2288BMASAVP1_A2757BMASAVP1_A2760
BMAL243160 BMA_0726BMA_0189BMA_0186
BHAL272558 BH2331BH2708BH1649
BCLA66692 ABC1664ABC1821ABC1886
BCER405917 BCE_2929BCE_4898BCE_1640
BCEN331272 BCEN2424_2427BCEN2424_2729BCEN2424_2732
BCEN331271 BCEN_1815BCEN_2117BCEN_2120
BBRO257310 BB4455BB4465BB4468
BAMB398577 BAMMC406_2336BAMMC406_2647BAMMC406_2650
BAMB339670 BAMB_2470BAMB_2780BAMB_2783
AVAR240292 AVA_4668AVA_3381AVA_1422
ASP62977 ACIAD0758ACIAD0382ACIAD0384
ASP62928 AZO1319AZO0377AZO0162
ASAL382245 ASA_4307ASA_4308ASA_4309
APLE434271 APJL_2030APJL_2032APJL_2031APJL_2030
APLE416269 APL_1982APL_1984APL_1983APL_1982
AHYD196024 AHA_0086AHA_0085AHA_0084
AFER243159 AFE_2416AFE_2723AFE_2738
AEHR187272 MLG_1633MLG_0071MLG_0070MLG_0069
ACAU438753 AZC_4346AZC_3918AZC_3919
ABAU360910 BAV3065BAV3075BAV3089
AAUR290340 AAUR_3638AAUR_2838AAUR_3102


Organism features enriched in list (features available for 171 out of the 181 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00004581292
Disease:Bubonic_plague 0.000597966
Disease:Dysentery 0.000597966
Disease:Gastroenteritis 0.00041331013
Disease:Legionnaire's_disease 0.007218544
Endospores:No 3.252e-834211
GC_Content_Range4:0-40 7.036e-2215213
GC_Content_Range4:40-60 7.853e-894224
GC_Content_Range4:60-100 0.000026362145
GC_Content_Range7:30-40 2.949e-1315166
GC_Content_Range7:50-60 1.540e-652107
GC_Content_Range7:60-70 2.443e-661134
Genome_Size_Range5:0-2 6.339e-215155
Genome_Size_Range5:2-4 5.042e-733197
Genome_Size_Range5:4-6 7.357e-22104184
Genome_Size_Range5:6-10 1.171e-62947
Genome_Size_Range9:1-2 8.037e-165128
Genome_Size_Range9:2-3 9.749e-715120
Genome_Size_Range9:4-5 1.604e-75096
Genome_Size_Range9:5-6 7.169e-125488
Genome_Size_Range9:6-8 2.339e-72638
Gram_Stain:Gram_Neg 3.266e-22148333
Gram_Stain:Gram_Pos 5.070e-1312150
Motility:No 2.120e-819151
Motility:Yes 7.319e-16122267
Optimal_temp.:- 0.005107288257
Optimal_temp.:37 0.009142322106
Oxygen_Req:Anaerobic 8.213e-98102
Oxygen_Req:Facultative 4.197e-785201
Pathogenic_in:No 0.005297754226
Shape:Coccus 2.756e-8582
Shape:Rod 1.572e-18147347
Shape:Sphere 0.0099389119
Shape:Spiral 0.0005570234
Temp._range:Hyperthermophilic 0.0028522123
Temp._range:Psychrophilic 0.003147279



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 230
Effective number of orgs (counting one per cluster within 468 clusters): 187

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS11
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.1
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis0
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96011
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
NSP387092 ncbi Nitratiruptor sp. SB155-20
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR267377 ncbi Methanococcus maripaludis S21
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GOXY290633 ncbi Gluconobacter oxydans 621H1
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
EFAE226185 ncbi Enterococcus faecalis V5830
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DRED349161 ncbi Desulfotomaculum reducens MI-11
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DETH243164 ncbi Dehalococcoides ethenogenes 1951
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDIF272563 ncbi Clostridium difficile 6301
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG11
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40180
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG11651   EG11476   EG11474   EG11473   
WSUC273121 WS1220
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX580
TWHI218496 TW0058
TWHI203267 TW053
TVOL273116 TVN0896
TTEN273068 TTE1190
TSP28240
TSP1755 TETH514_1464
TPSE340099 TETH39_1025
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TDEN326298
TDEN243275
TACI273075
SWOL335541 SWOL_0342
STOK273063
STHE322159 STER_1047
STHE299768 STR1062
STHE264199 STU1062
SSUI391296
SSUI391295
SSP84588 SYNW2524OR1109
SSP64471 GSYN3114
SSP387093
SSP1148 SLL0095
SSP1131 SYNCC9605_2693
SSOL273057
SPYO370554 MGAS10750_SPY1411
SPYO370553 MGAS2096_SPY1321
SPYO370552 MGAS10270_SPY1417
SPYO370551 MGAS9429_SPY1296
SPYO319701 M28_SPY1343
SPYO293653 M5005_SPY1302
SPYO286636 M6_SPY1320
SPYO198466 SPYM3_1283
SPYO193567 SPS0578
SPYO186103
SPYO160490 SPY1582
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SGOR29390
SAGA211110 GBS0486
SAGA208435
SAGA205921 SAK_0522
SACI56780 SYN_00297
SACI330779
RSAL288705 RSAL33209_2638
RALB246199 GRAORF_4043
PTOR263820
PRUM264731 GFRORF0722
PPEN278197
PMOB403833
PMAR93060 P9215_19861
PMAR74547 PMT2272
PMAR74546 PMT9312_1806
PMAR59920 PMN2A_1325
PMAR167555 NATL1_21981
PMAR167546 P9301ORF_1946
PMAR167542
PMAR167540 PMM1714
PMAR167539 PRO_1883
PMAR146891 A9601_19231
PLUT319225 PLUT_1697
PISL384616 PISL_1338
PINT246198 PIN_A1773
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747 PPA1943
PABY272844
NSP387092
MTHE349307 MTHE_1429
MTHE187420 MTH1645
MSYN262723
MSUC221988
MSTA339860 MSP_1282
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368 MMARC7_1594
MMAR402880
MMAR267377 MMP1179
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0208
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1648
MART243272
MAEO419665
LXYL281090 LXX01820
LSAK314315
LLAC272623
LINT363253
LINT267671 LIC_20171
LINT189518 LB215
LHEL405566
LDEL390333
LDEL321956
LCAS321967
LBOR355277 LBJ_4143
LBOR355276 LBL_4158
LBIF456481
LBIF355278
LACI272621
IHOS453591
HWAL362976 HQ3251A
HSP64091 VNG1770C
HSAL478009 OE3490R
HPYL85963
HPYL357544
HPY
HMUK485914 HMUK_1274
HMAR272569 RRNAC3151
HINF71421
HINF374930
HINF281310
HHEP235279
HBUT415426
HACI382638
GOXY290633 GOX2499
FSUC59374 FSU2226
FNUC190304
FNOD381764
FMAG334413
FJOH376686 FJOH_1467
EFAE226185
DVUL882 DVU_3174
DSP255470 CBDBA349
DSP216389 DEHABAV1_0377
DRED349161 DRED_2198
DPSY177439 DP1332
DETH243164 DET_0398
DDES207559 DDE_3185
CTRA471473
CTRA471472
CTET212717 CTC_02188
CSUL444179
CPRO264201 PC1060
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CNOV386415
CMUR243161
CMIC31964 CMS3012
CMET456442 MBOO_2205
CMAQ397948 CMAQ_0864
CKOR374847 KCR_0412
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK1865
CHUT269798 CHU_2710
CHOM360107
CFET360106
CFEL264202
CDIF272563 CD2747
CCUR360105
CCON360104
CCHL340177 CAG_0560
CCAV227941
CBOT536232 CLM_0029
CBOT515621 CLJ_B0028
CBOT508765 CLL_A0101
CBOT498213 CLD_0793
CBOT441772 CLI_0039
CBOT441771 CLC_0043
CBOT441770 CLB_0035
CBOT36826 CBO0026
CBEI290402 CBEI_2963
CACE272562 CAC0033
CABO218497
BXEN266265 BXE_B1986
BTUR314724
BTHE226186 BT_4216
BSP107806
BPUM315750 BPUM_2006
BLON206672
BLIC279010 BL02783
BHER314723
BGAR290434
BFRA295405 BF0917
BFRA272559 BF0839
BCIC186490
BCER315749 BCER98_1236
BBUR224326
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
APER272557
AORE350688
ANAE240017 ANA_1626
AMET293826 AMET_2350
ALAI441768
AFUL224325
ADEH290397 ADEH_1699
ACRY349163 ACRY_1724
ACEL351607 ACEL_0265
ABUT367737
AAEO224324


Organism features enriched in list (features available for 215 out of the 230 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 6.644e-75592
Arrangment:Singles 0.0046340119286
Disease:Botulism 0.006621855
Disease:Pharyngitis 0.000314788
Disease:Wide_range_of_infections 0.00001451111
Disease:bronchitis_and_pneumonitis 0.000314788
Disease:meningitis 0.000871477
Endospores:No 4.432e-14120211
GC_Content_Range4:0-40 1.215e-18128213
GC_Content_Range4:40-60 0.008633371224
GC_Content_Range4:60-100 3.038e-1615145
GC_Content_Range7:0-30 7.239e-93647
GC_Content_Range7:30-40 4.009e-992166
GC_Content_Range7:50-60 1.402e-619107
GC_Content_Range7:60-70 1.391e-1513134
Genome_Size_Range5:0-2 6.601e-30116155
Genome_Size_Range5:4-6 1.003e-2119184
Genome_Size_Range5:6-10 5.976e-7347
Genome_Size_Range9:0-1 1.619e-72327
Genome_Size_Range9:1-2 6.402e-2193128
Genome_Size_Range9:4-5 1.672e-61696
Genome_Size_Range9:5-6 1.504e-15388
Genome_Size_Range9:6-8 3.561e-6238
Gram_Stain:Gram_Neg 1.786e-891333
Habitat:Multiple 0.004555853178
Habitat:Specialized 0.00108153053
Motility:No 0.000928671151
Optimal_temp.:- 0.002625980257
Optimal_temp.:25-30 0.0015632119
Optimal_temp.:37 0.000090956106
Oxygen_Req:Aerobic 1.802e-1035185
Oxygen_Req:Anaerobic 8.420e-1775102
Oxygen_Req:Facultative 0.004289061201
Oxygen_Req:Microaerophilic 0.00680091218
Pathogenic_in:Animal 0.00075711366
Pathogenic_in:Swine 0.006621855
Salinity:Non-halophilic 0.004872250106
Shape:Coccus 0.00161634282
Shape:Irregular_coccus 8.970e-71617
Shape:Oval 0.006621855
Shape:Rod 2.709e-1583347
Shape:Sphere 0.00002151619
Shape:Spiral 2.330e-103034
Temp._range:Hyperthermophilic 2.182e-92223



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
AST-PWY (arginine degradation II (AST pathway))1201050.6288
GLYCOCAT-PWY (glycogen degradation I)2461490.5607
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181360.5386
PWY-4041 (γ-glutamyl cycle)2791530.5115
PWY-5918 (heme biosynthesis I)2721500.5060
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951210.4906
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911520.4780
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861500.4747
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961530.4744
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901510.4731
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001540.4730
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391650.4721
TYRFUMCAT-PWY (tyrosine degradation I)1841140.4692
PWY0-1182 (trehalose degradation II (trehalase))70620.4664
GLUCONSUPER-PWY (D-gluconate degradation)2291300.4654
PWY0-981 (taurine degradation IV)106800.4630
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149990.4617
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491360.4595
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491360.4595
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81670.4569
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911150.4563
PWY-5386 (methylglyoxal degradation I)3051530.4554
PWY-5148 (acyl-CoA hydrolysis)2271270.4485
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761080.4466
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251250.4389
GALACTITOLCAT-PWY (galactitol degradation)73610.4374
PWY-1269 (CMP-KDO biosynthesis I)3251560.4358
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481620.4336
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96710.4222
PWY-5913 (TCA cycle variation IV)3011470.4213
GLUCARDEG-PWY (D-glucarate degradation I)152950.4185
PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)1781050.4170
PWY-5340 (sulfate activation for sulfonation)3851680.4085
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981710.4075
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291530.4066
GLUTAMINDEG-PWY (glutamine degradation I)1911080.4026
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94680.4019
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651620.4016



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11476   EG11474   EG11473   
EG116510.9985340.9985960.999399
EG114760.9996490.999919
EG114740.999638
EG11473



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PAIRWISE BLAST SCORES:

  EG11651   EG11476   EG11474   EG11473   
EG116510.0f0---
EG11476-0.0f0--
EG11474--0.0f0-
EG11473---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ALL-CHORISMATE-PWY (superpathway of chorismate) (degree of match pw to cand: 0.035, degree of match cand to pw: 0.500, average score: 0.580)
  Genes in pathway or complex:
             0.0247 0.0014 EG10799 (purN) GART-MONOMER (phosphoribosylglycinamide formyltransferase 1)
             0.7597 0.4393 EG11375 (folE) GTP-CYCLOHYDRO-I-MONOMER (GTP cyclohydrolase I monomer)
             0.7200 0.1475 EG11138 (nudB) H2NEOPTERINP3PYROPHOSPHOHYDRO-MONOMER (dihydroneopterin triphosphate pyrophosphohydrolase)
             0.5896 0.2151 EG11673 (folB) H2NEOPTERINALDOL-MONOMER (FolB)
             0.4134 0.0814 EG11374 (folK) H2PTERIDINEPYROPHOSPHOKIN-MONOMER (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase)
             0.8016 0.6494 G6862 (folM) G6862-MONOMER (dihydromonapterin reductase / dihydrofolate reductase)
             0.7356 0.5002 EG10326 (folA) DIHYDROFOLATEREDUCT-MONOMER (dihydrofolate reductase)
             0.6011 0.0272 EG10327 (folC) FOLC-MONOMER (bifunctional folypolyglutamate synthetase / dihydrofolate synthetase)
             0.3636 0.0578 EG10328 (folD) FOLD-MONOMER (FolD)
             0.6353 0.2165 EG10682 (pabA) PABASYN-COMPII-MONOMER (PabA)
             0.1215 0.0028 EG10683 (pabB) PABASYN-COMPI-MONOMER (PabB)
             0.3411 0.0580 EG50011 (folP) H2PTEROATESYNTH-MONOMER (FolP)
             0.2100 0.0035 EG11493 (pabC) ADCLY-MONOMER (pabC)
             0.9381 0.7988 EG11369 (ubiC) CHORPYRLY-MONOMER (chorismate lyase)
             0.9752 0.9250 EG11370 (ubiA) 4OHBENZOATE-OCTAPRENYLTRANSFER-MONOMER (4-hydroxybenzoate octaprenyltransferase)
             0.6774 0.3492 EG11044 (ubiX) UBIX-MONOMER (3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG)
             0.9380 0.7598 EG11396 (ubiD) EG11396-MONOMER (3-octaprenyl-4-hydroxybenzoate carboxy-lyase monomer)
   *in cand* 0.9995 0.9985 EG11476 (ubiB) 2-OCTAPRENYLPHENOL-HYDROX-MONOMER (2-octaprenylphenol hydroxylase)
             0.4585 0.0272 EG11143 (ubiG) DHHB-METHYLTRANSFER-MONOMER (UbiG)
             0.9329 0.7813 EG11324 (ubiH) OCTAPRENYL-METHOXYPHENOL-OH-MONOMER (2-octaprenyl-6-methoxyphenol hydroxylase)
             0.8027 0.5544 G6365 (ubiF) OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-MON (2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase)
             0.5940 0.4686 EG11040 (tyrB) TYRB-MONOMER (TyrB)
             0.2845 0.0293 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.3878 0.0645 EG10707 (pheA) CHORISMUTPREPHENDEHYDRAT-MONOMER (PheA)
             0.3093 0.1721 EG11039 (tyrA) CHORISMUTPREPHENDEHYDROG-MONOMER (TyrA)
             0.9882 0.9719 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.1733 0.0021 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
             0.2166 0.0006 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
             0.3808 0.0278 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
             0.4735 0.0377 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
             0.5399 0.0376 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
             0.0685 0.0278 EG10075 (aroC) AROC-MONOMER (AroC)
             0.5206 0.0276 EG10073 (aroA) AROA-MONOMER (3-phosphoshikimate-1-carboxyvinyltransferase)
             0.9871 0.9832 EG10082 (aroL) AROL-MONOMER (shikimate kinase II)
             0.9723 0.9258 EG10081 (aroK) AROK-MONOMER (shikimate kinase I)
             0.9736 0.9221 EG10077 (aroE) AROE-MONOMER (shikimate dehydrogenase)
             0.2940 0.0702 EG10076 (aroD) AROD-MONOMER (AroD)
             0.9845 0.9607 EG10074 (aroB) AROB-MONOMER (3-dehydroquinate synthase)
             0.1846 0.0407 EG10079 (aroG) AROG-MONOMER (AroG)
             0.0736 0.0032 EG10080 (aroH) AROH-MONOMER (AroH)
             0.2495 0.1161 EG10078 (aroF) AROF-MONOMER (AroF)
             0.9005 0.7280 EG11234 (ydiB) EG11234-MONOMER (YdiB)
             0.7239 0.5731 EG10261 (entC) ENTC-MONOMER (isochorismate synthase 1)
             0.2692 0.0734 EG10259 (entA) ENTA-MONOMER (EntA)
             0.4306 0.1997 EG10263 (entE) ENTE-MONOMER (EntE)
             0.3286 0.0990 EG10264 (entF) ENTF-PANT (aryl carrier protein / serine activating enzyme)
             0.3032 0.1213 EG10262 (entD) ENTD-MONOMER (phosphopantetheinyl transferase)
             0.3452 0.1383 EG10260 (entB) ENTB-MONOMER (EntB)
             0.2391 0.0444 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
             0.8092 0.6016 EG11368 (menB) NAPHTHOATE-SYN-MONOMER (MenB)
             0.4400 0.1315 EG12438 (menH) EG12438-MONOMER ((1R,6R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase)
             0.6643 0.3725 EG10579 (menD) MEND-MONOMER (MenD)
             0.6329 0.4102 EG12362 (menF) MENF-MONOMER (MenF)
             0.6415 0.4616 EG11532 (menC) O-SUCCINYLBENZOATE-COA-SYN-MONOMER (o-succinylbenzoate synthase)
             0.5510 0.2331 EG12437 (menE) O-SUCCINYLBENZOATE-COA-LIG-MONOMER (MenE)
             0.9310 0.7537 EG11880 (menA) DMK-MONOMER (1,4-dihydroxy-2-naphthoate octaprenyltransferase)
   *in cand* 0.9997 0.9994 EG11473 (ubiE) 2-OCTAPRENYL-METHOXY-BENZOQ-METH-MONOMER (bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG11474 (yigP) EG11474-MONOMER (conserved protein)
   *in cand* 0.9991 0.9985 EG11651 (yafE) EG11651-MONOMER (predicted S-adenosylmethionine-dependent methyltransferase)
   This pathway has holes

- UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic)) (degree of match pw to cand: 0.222, degree of match cand to pw: 0.500, average score: 0.803)
  Genes in pathway or complex:
             0.8027 0.5544 G6365 (ubiF) OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-MON (2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase)
   *in cand* 0.9997 0.9994 EG11473 (ubiE) 2-OCTAPRENYL-METHOXY-BENZOQ-METH-MONOMER (bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase)
             0.9329 0.7813 EG11324 (ubiH) OCTAPRENYL-METHOXYPHENOL-OH-MONOMER (2-octaprenyl-6-methoxyphenol hydroxylase)
             0.4585 0.0272 EG11143 (ubiG) DHHB-METHYLTRANSFER-MONOMER (UbiG)
   *in cand* 0.9995 0.9985 EG11476 (ubiB) 2-OCTAPRENYLPHENOL-HYDROX-MONOMER (2-octaprenylphenol hydroxylase)
             0.9380 0.7598 EG11396 (ubiD) EG11396-MONOMER (3-octaprenyl-4-hydroxybenzoate carboxy-lyase monomer)
             0.6774 0.3492 EG11044 (ubiX) UBIX-MONOMER (3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG)
             0.9752 0.9250 EG11370 (ubiA) 4OHBENZOATE-OCTAPRENYLTRANSFER-MONOMER (4-hydroxybenzoate octaprenyltransferase)
             0.9381 0.7988 EG11369 (ubiC) CHORPYRLY-MONOMER (chorismate lyase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG11474 (yigP) EG11474-MONOMER (conserved protein)
   *in cand* 0.9991 0.9985 EG11651 (yafE) EG11651-MONOMER (predicted S-adenosylmethionine-dependent methyltransferase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11473 EG11474 EG11476 (centered at EG11474)
EG11651 (centered at EG11651)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11651   EG11476   EG11474   EG11473   
288/623350/623100/623416/623
AAUR290340:2:Tyes7930-258
AAVE397945:0:Tyes-0-3
ABAC204669:0:Tyes0--1461
ABAU360910:0:Tyes010-24
ABOR393595:0:Tyes-2-0
ACAU438753:0:Tyes4390-1
ACEL351607:0:Tyes---0
ACRY349163:8:Tyes---0
ADEH290397:0:Tyes-0--
AEHR187272:0:Tyes1553210
AFER243159:0:Tyes0301-316
AHYD196024:0:Tyes-210
AMAR234826:0:Tyes-0-443
AMAR329726:9:Tyes01295--
AMET293826:0:Tyes-0--
ANAE240017:0:Tyes---0
APHA212042:0:Tyes-0-85
APLE416269:0:Tyes0210
APLE434271:0:Tno0210
ASAL382245:5:Tyes-012
ASP1667:3:Tyes0--1192
ASP232721:2:Tyes-3-0
ASP62928:0:Tyes1188219-0
ASP62977:0:Tyes3460-2
ASP76114:2:Tyes-346-0
AVAR240292:3:Tyes32551965-0
BABO262698:0:Tno-0-1
BAMB339670:3:Tno0312-315
BAMB398577:3:Tno0313-316
BAMY326423:0:Tyes0--1482
BANT260799:0:Tno1261--0
BANT261594:2:Tno1241--0
BANT568206:2:Tyes0--1339
BANT592021:2:Tno1334--0
BBAC264462:0:Tyes-0-2832
BBAC360095:0:Tyes-1-0
BBRO257310:0:Tyes010-13
BCAN483179:0:Tno-0-1
BCEN331271:2:Tno0304-307
BCEN331272:3:Tyes0302-305
BCER226900:1:Tyes1348--0
BCER288681:0:Tno1215--0
BCER315749:1:Tyes---0
BCER405917:1:Tyes12083089-0
BCER572264:1:Tno1387--0
BCLA66692:0:Tyes0162-227
BFRA272559:1:Tyes---0
BFRA295405:0:Tno---0
BHAL272558:0:Tyes6821059-0
BHEN283166:0:Tyes-0-1
BJAP224911:0:Fyes-0-1
BLIC279010:0:Tyes---0
BMAL243160:1:Tno4963-0
BMAL320388:1:Tno0458-461
BMAL320389:1:Tyes0780-777
BMEL224914:0:Tno-1-0
BMEL359391:0:Tno-0-1
BOVI236:0:Tyes-0-1
BPAR257311:0:Tno-0-3
BPER257313:0:Tyes33353-0
BPET94624:0:Tyes132-0
BPSE272560:1:Tyes3783-0
BPSE320372:1:Tno3873-0
BPSE320373:1:Tno3903-0
BPUM315750:0:Tyes---0
BQUI283165:0:Tyes-0-1
BSP36773:2:Tyes0304-307
BSP376:0:Tyes-1-0
BSUB:0:Tyes0--2079
BSUI204722:0:Tyes-0-1
BSUI470137:0:Tno-0-1
BTHA271848:1:Tno3163-0
BTHE226186:0:Tyes---0
BTHU281309:1:Tno1239--0
BTHU412694:1:Tno1170--0
BTRI382640:1:Tyes-0-1
BVIE269482:7:Tyes0317-320
BWEI315730:4:Tyes1214--0
BXEN266265:1:Tyes-0--
CACE272562:1:Tyes-0--
CAULO:0:Tyes-1-0
CBEI290402:0:Tyes---0
CBLO203907:0:Tyes-0-1
CBLO291272:0:Tno-0-1
CBOT36826:1:Tno-0--
CBOT441770:0:Tyes-0--
CBOT441771:0:Tno-0--
CBOT441772:1:Tno-0--
CBOT498213:1:Tno-0--
CBOT508765:1:Tyes-0--
CBOT515621:2:Tyes-0--
CBOT536232:0:Tno-0--
CBUR227377:1:Tyes-2-0
CBUR360115:1:Tno-0-2
CBUR434922:2:Tno-2-0
CCHL340177:0:Tyes0---
CDES477974:0:Tyes374649-0
CDIF272563:1:Tyes-0--
CDIP257309:0:Tyes0--0
CEFF196164:0:Fyes0--0
CGLU196627:0:Tyes0--0
CHUT269798:0:Tyes---0
CHYD246194:0:Tyes0646-1220
CJAP155077:0:Tyes0347734763475
CJEI306537:0:Tyes---0
CKLU431943:1:Tyes9301956-0
CKOR374847:0:Tyes0---
CMAQ397948:0:Tyes0---
CMET456442:0:Tyes-0--
CMIC31964:2:Tyes---0
CMIC443906:2:Tyes0--1358
CPEL335992:0:Tyes-0-1
CPER195102:1:Tyes02441--
CPER195103:0:Tno02587--
CPER289380:3:Tyes02284--
CPRO264201:0:Fyes---0
CPSY167879:0:Tyes0210
CRUT413404:0:Tyes-2-0
CSAL290398:0:Tyes2012
CSP501479:7:Fyes-0-1
CSP78:2:Tyes-0-2
CTEP194439:0:Tyes0--0
CTET212717:0:Tyes0---
CVES412965:0:Tyes-2-0
CVIO243365:0:Tyes-2-0
DARO159087:0:Tyes-0-247
DDES207559:0:Tyes---0
DETH243164:0:Tyes0---
DGEO319795:1:Tyes0--0
DHAF138119:0:Tyes427178-0
DNOD246195:0:Tyes-2-0
DOLE96561:0:Tyes-0-847
DPSY177439:2:Tyes---0
DRAD243230:3:Tyes0--1279
DRED349161:0:Tyes---0
DSHI398580:5:Tyes10-1
DSP216389:0:Tyes0---
DSP255470:0:Tno0---
DVUL882:1:Tyes---0
ECAN269484:0:Tyes-0-560
ECAR218491:0:Tyes3322210
ECHA205920:0:Tyes-0-149
ECOL199310:0:Tno0444944484447
ECOL316407:0:Tno0322632273228
ECOL331111:6:Tno0397639753974
ECOL362663:0:Tno0382138203819
ECOL364106:1:Tno0417941784177
ECOL405955:2:Tyes0370036993698
ECOL409438:6:Tyes0399239913990
ECOL413997:0:Tno0354635453544
ECOL439855:4:Tno0386938683867
ECOL469008:0:Tno0787788789
ECOL481805:0:Tno0736737738
ECOL585034:0:Tno0376737663765
ECOL585035:0:Tno0392639253924
ECOL585055:0:Tno0405340524051
ECOL585056:2:Tno0415441534152
ECOL585057:0:Tno0274727482749
ECOL585397:0:Tno0420142004199
ECOL83334:0:Tno0466746664665
ECOLI:0:Tno0369736963695
ECOO157:0:Tno0468846874686
EFER585054:1:Tyes0338833893390
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