CANDIDATE ID: 856

CANDIDATE ID: 856

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9908967e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   4.0600000e-21

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7031 (uspC) (b1895)
   Products of gene:
     - G7031-MONOMER (universal stress protein)

- G6699 (uspF) (b1376)
   Products of gene:
     - G6699-MONOMER (nucleotide binding filament protein)

- G6334 (uspG) (b0607)
   Products of gene:
     - G6334-MONOMER (universal stress protein UP12)
     - CPLX0-3939 (universal stress protein UP12)

- EG11390 (uspA) (b3495)
   Products of gene:
     - EG11390-MONOMER (universal stress global stress response regulator)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 111
Effective number of orgs (counting one per cluster within 468 clusters): 73

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-23
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP644076 Silicibacter sp. TrichCH4B3
SSP292414 ncbi Ruegeria sp. TM10403
SSON300269 ncbi Shigella sonnei Ss0464
SRUB309807 ncbi Salinibacter ruber DSM 138553
SPRO399741 ncbi Serratia proteamaculans 5684
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122283
SEPI176279 ncbi Staphylococcus epidermidis RP62A3
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEG203122 ncbi Saccharophagus degradans 2-403
SBOY300268 ncbi Shigella boydii Sb2274
RFER338969 ncbi Rhodoferax ferrireducens T1183
REUT264198 ncbi Ralstonia eutropha JMP1343
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15013
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257453
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-13
PENT384676 ncbi Pseudomonas entomophila L484
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO13
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA143
NPHA348780 ncbi Natronomonas pharaonis DSM 21603
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30913
MSP400668 ncbi Marinomonas sp. MWYL14
MHUN323259 ncbi Methanospirillum hungatei JF-13
MBAR269797 ncbi Methanosarcina barkeri Fusaro3
MAQU351348 ncbi Marinobacter aquaeolei VT84
LSAK314315 ncbi Lactobacillus sakei sakei 23K3
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
HSP64091 ncbi Halobacterium sp. NRC-13
HSOM228400 ncbi Haemophilus somnus 23363
HSOM205914 ncbi Haemophilus somnus 129PT3
HSAL478009 ncbi Halobacterium salinarum R13
HMAR272569 ncbi Haloarcula marismortui ATCC 430493
HINF71421 ncbi Haemophilus influenzae Rd KW203
HINF374930 ncbi Haemophilus influenzae PittEE3
HINF281310 ncbi Haemophilus influenzae 86-028NP3
HCHE349521 ncbi Hahella chejuensis KCTC 23964
GFOR411154 ncbi Gramella forsetii KT08034
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DGEO319795 ncbi Deinococcus geothermalis DSM 113003
CTEP194439 ncbi Chlorobium tepidum TLS3
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
BVIE269482 ncbi Burkholderia vietnamiensis G44
BSP36773 Burkholderia sp.3
ASP62977 ncbi Acinetobacter sp. ADP13
ASP232721 ncbi Acidovorax sp. JS423
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
AHYD196024 Aeromonas hydrophila dhakensis4
ABOR393595 ncbi Alcanivorax borkumensis SK24


Names of the homologs of the genes in the group in each of these orgs
  G7031   G6699   G6334   EG11390   
VVUL216895 VV1_1115VV1_0677VV1_0677VV1_1115
VVUL196600 VV0075VV0463VV0463VV0075
VPAR223926 VP0076VP0319VP0319VP0076
VFIS312309 VF0083VF0272VF0272VF0083
VEIS391735 VEIS_1173VEIS_1627VEIS_0644
VCHO345073 VC0395_A2438VC0395_A2846VC0395_A2846VC0395_A2438
VCHO VC0076VC0428VC0428VC0076
TCRU317025 TCR_1714TCR_1714TCR_1714TCR_1714
STYP99287 STM1927STM1652STM0614STM3591
SSP644076 SCH4B_2351SCH4B_2351SCH4B_2351
SSP292414 TM1040_1250TM1040_1250TM1040_1250
SSON300269 SSO_1222SSO_1749SSO_0559SSO_3730
SRUB309807 SRU_0676SRU_0802SRU_1736
SPRO399741 SPRO_2991SPRO_1834SPRO_1834SPRO_4691
SHIGELLA USPAYNAFYBDQUSPA
SFLE373384 SFV_1939SFV_1813SFV_0561SFV_3507
SFLE198214 AAN44983.1AAN43389.1AAN42172.1AAN44983.1
SEPI176280 SE_1385SE_1385SE_1385
SEPI176279 SERP1273SERP1273SERP1273
SENT454169 SEHA_C2143SEHA_C1834SEHA_C0726SEHA_C3904
SENT321314 SCH_1934SCH_1646SCH_0645SCH_3520
SENT295319 SPA0941SPA1234SPA2120SPA3448
SENT220341 STY2136STY1416STY0662STY4212
SENT209261 T0950T1555T2253T3925
SDYS300267 SDY_1192SDY_1458SDY_0542SDY_3567
SDEG203122 SDE_1780SDE_1780SDE_1780
SBOY300268 SBO_1113SBO_1690SBO_0472SBO_3493
RFER338969 RFER_1926RFER_0916RFER_2198
REUT264198 REUT_A1112REUT_A1213REUT_A3201
PSYR223283 PSPTO_3520PSPTO_3520PSPTO_3520PSPTO_3520
PSYR205918 PSYR_3293PSYR_3293PSYR_3293PSYR_3293
PSTU379731 PST_2483PST_2483PST_2483
PSP296591 BPRO_1197BPRO_1206BPRO_1206BPRO_4298
PPUT76869 PPUTGB1_1674PPUTGB1_1674PPUTGB1_1674PPUTGB1_1674
PPUT351746 PPUT_3608PPUT_3608PPUT_3608PPUT_3608
PPUT160488 PP_2132PP_2132PP_2132PP_2132
PPRO298386 PBPRA0125PBPRA0387PBPRA0387PBPRA0125
PPEN278197 PEPE_0355PEPE_1300PEPE_0355
PNAP365044 PNAP_2298PNAP_2306PNAP_2298PNAP_2306
PMUL272843 PM1286PM0669PM0474PM1286
PMEN399739 PMEN_1578PMEN_1578PMEN_1578PMEN_1578
PLUM243265 PLU0121PLU2032PLU2030PLU0121
PING357804 PING_1234PING_2734PING_2734PING_0955
PFLU220664 PFL_1938PFL_1938PFL_1938PFL_1938
PFLU216595 PFLU1551PFLU1551PFLU1551PFLU1551
PFLU205922 PFL_3881PFL_3881PFL_3881
PENT384676 PSEEN3731PSEEN3731PSEEN3731PSEEN3731
PATL342610 PATL_2094PATL_2094PATL_2094PATL_2094
PAER208964 PA3017PA3017PA3017
PAER208963 PA14_25040PA14_25040PA14_25040
NPHA348780 NP4806ANP0056ANP5138A
NMUL323848 NMUL_A1974NMUL_A1974NMUL_A0991NMUL_A1974
NEUT335283 NEUT_2476NEUT_2476NEUT_2130NEUT_1683
NEUR228410 NE1028NE1028NE1028NE1028
MSUC221988 MS0349MS1076MS0329MS0349
MSTA339860 MSP_1410MSP_1410MSP_0696
MSP400668 MMWYL1_2111MMWYL1_2111MMWYL1_2111MMWYL1_2111
MHUN323259 MHUN_0848MHUN_0542MHUN_0848
MBAR269797 MBAR_A0487MBAR_A3218MBAR_A3038
MAQU351348 MAQU_1142MAQU_2171MAQU_1142MAQU_1142
LSAK314315 LSA0038LSA0836LSA0038
LPNE400673 LPC_0961LPC_2355LPC_2355LPC_0961
LPNE297246 LPP1497LPP0997LPP0997LPP1497
LPNE297245 LPL1486LPL0966LPL0966LPL1486
LPNE272624 LPG1540LPG0935LPG0935LPG1540
KPNE272620 GKPORF_B1553GKPORF_B0423GKPORF_B5075GKPORF_B3210
HSP64091 VNG1752CVNG1752CVNG1752C
HSOM228400 HSM_1059HSM_1358HSM_1059
HSOM205914 HS_1121HS_0879HS_1121
HSAL478009 OE3466ROE3466ROE3466R
HMAR272569 RRNAC3553RRNAC2455PNG7373
HINF71421 HI_0815HI_1426HI_0815
HINF374930 CGSHIEE_07985CGSHIEE_04710CGSHIEE_07985
HINF281310 NTHI0979NTHI1708NTHI0979
HCHE349521 HCH_04760HCH_04760HCH_04760HCH_04760
GFOR411154 GFO_1570GFO_0155GFO_0155GFO_1570
ESP42895 ENT638_2471ENT638_4244ENT638_1147ENT638_3909
EFER585054 EFER_1128EFER_1624EFER_2485EFER_3488
ECOO157 YECGYNAFYBDQUSPA
ECOL83334 ECS2603ECS1997ECS0646ECS4367
ECOL585397 ECED1_2161ECED1_1558ECED1_0606ECED1_4164
ECOL585057 ECIAI39_1157ECIAI39_1696ECIAI39_0585ECIAI39_3985
ECOL585056 ECUMN_2190ECUMN_1642ECUMN_0702ECUMN_3980
ECOL585055 EC55989_2072EC55989_1511EC55989_0600EC55989_3933
ECOL585035 ECS88_1950ECS88_1491ECS88_0649ECS88_3900
ECOL585034 ECIAI1_1980ECIAI1_1375ECIAI1_0592ECIAI1_3640
ECOL481805 ECOLC_1739ECOLC_2280ECOLC_3036ECOLC_0221
ECOL469008 ECBD_1745ECBD_2248ECBD_3045ECBD_0246
ECOL439855 ECSMS35_1290ECSMS35_1777ECSMS35_0628ECSMS35_3784
ECOL413997 ECB_01864ECB_01347ECB_00576ECB_03344
ECOL409438 ECSE_2128ECSE_1459ECSE_0675ECSE_3760
ECOL405955 APECO1_941APECO1_549APECO1_1442APECO1_2958
ECOL364106 UTI89_C2096UTI89_C1617UTI89_C0610UTI89_C4014
ECOL362663 ECP_1837ECP_1401ECP_0640ECP_3585
ECOL331111 ECE24377A_2127ECE24377A_1559ECE24377A_0628ECE24377A_3977
ECOL316407 ECK1894:JW1884:B1895ECK1371:JW1370:B1376ECK0601:JW0600:B0607ECK3480:JW3462:B3495
ECOL199310 C2309C1821C0696C4293
ECAR218491 ECA0050ECA1769ECA1769ECA0050
DGEO319795 DGEO_2742DGEO_1279DGEO_1279
CTEP194439 CT_0797CT_0106CT_1011
CSAL290398 CSAL_2397CSAL_2397CSAL_1094CSAL_2397
CBUR434922 COXBU7E912_2080COXBU7E912_2080COXBU7E912_2080COXBU7E912_2080
CBUR360115 COXBURSA331_A0102COXBURSA331_A2117COXBURSA331_A0102COXBURSA331_A0102
CBUR227377 CBU_1983CBU_1916CBU_1983CBU_1983
BVIE269482 BCEP1808_5654BCEP1808_1955BCEP1808_1549BCEP1808_6354
BSP36773 BCEP18194_A5358BCEP18194_A4735BCEP18194_B3137
ASP62977 ACIAD1238ACIAD2005ACIAD1238
ASP232721 AJS_1081AJS_1081AJS_1081
ASAL382245 ASA_0046ASA_0896ASA_0896ASA_0046
AHYD196024 AHA_0051AHA_3418AHA_3418AHA_0051
ABOR393595 ABO_1011ABO_1011ABO_1011ABO_1011


Organism features enriched in list (features available for 106 out of the 111 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0001069592
Arrangment:Pairs 0.004051430112
Disease:Dysentery 0.000032166
Disease:Gastroenteritis 0.0030622713
Disease:Legionnaire's_disease 0.001042744
Disease:chronic_bronchitis 0.005871733
GC_Content_Range4:0-40 6.831e-816213
GC_Content_Range4:40-60 7.667e-865224
GC_Content_Range7:0-30 0.0005978147
GC_Content_Range7:30-40 0.000081515166
GC_Content_Range7:50-60 1.122e-943107
Genome_Size_Range5:0-2 1.867e-96155
Genome_Size_Range5:4-6 7.219e-959184
Genome_Size_Range9:1-2 5.919e-76128
Genome_Size_Range9:4-5 0.00150622896
Genome_Size_Range9:5-6 0.00001583188
Gram_Stain:Gram_Neg 3.120e-1291333
Gram_Stain:Gram_Pos 7.807e-105150
Habitat:Multiple 0.004619343178
Motility:No 0.000034712151
Motility:Yes 2.305e-874267
Oxygen_Req:Anaerobic 0.00027187102
Oxygen_Req:Facultative 1.276e-862201
Shape:Coccobacillus 0.0057050611
Shape:Coccus 0.0050337782
Shape:Rod 4.078e-683347
Shape:Spiral 0.0070676134
Temp._range:Mesophilic 0.001904796473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 372
Effective number of orgs (counting one per cluster within 468 clusters): 297

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae1
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-101
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80041
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339131
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3061
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TTUR377629 ncbi Teredinibacter turnerae T79011
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148631
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA11
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RALB246199 Ruminococcus albus 80
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PRUM264731 ncbi Prevotella ruminicola 230
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT31
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1251
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
OCAR504832 ncbi Oligotropha carboxidovorans OM51
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71201
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NOCE323261 ncbi Nitrosococcus oceani ATCC 197071
NMEN374833 ncbi Neisseria meningitidis 0534421
NMEN272831 ncbi Neisseria meningitidis FAM181
NMEN122587 ncbi Neisseria meningitidis Z24911
NMEN122586 ncbi Neisseria meningitidis MC581
NGON242231 ncbi Neisseria gonorrhoeae FA 10901
NFAR247156 ncbi Nocardia farcinica IFM 101520
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MXAN246197 ncbi Myxococcus xanthus DK 16221
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR394221 ncbi Maricaulis maris MCS100
MMAR267377 ncbi Methanococcus maripaludis S21
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MKAN190192 ncbi Methanopyrus kandleri AV190
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCHO395495 ncbi Leptothrix cholodnii SP-61
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP375286 ncbi Janthinobacterium sp. Marseille1
ILOI283942 ncbi Idiomarina loihiensis L2TR1
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf41
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GOXY290633 ncbi Gluconobacter oxydans 621H0
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A1
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CVIO243365 ncbi Chromobacterium violaceum ATCC 124721
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6301
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CAULO ncbi Caulobacter crescentus CB150
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BTHA271848 ncbi Burkholderia thailandensis E2641
BSUB ncbi Bacillus subtilis subtilis 1680
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPSE320373 ncbi Burkholderia pseudomallei 6680
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BPSE272560 ncbi Burkholderia pseudomallei K962430
BPET94624 Bordetella petrii1
BPER257313 ncbi Bordetella pertussis Tohama I1
BPAR257311 ncbi Bordetella parapertussis 128221
BMAL320389 ncbi Burkholderia mallei NCTC 102470
BMAL320388 ncbi Burkholderia mallei SAVP10
BMAL243160 ncbi Burkholderia mallei ATCC 233440
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K161
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62928 ncbi Azoarcus sp. BH720
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-11
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451
AAVE397945 ncbi Acidovorax citrulli AAC00-11
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7031   G6699   G6334   EG11390   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884 XCC-B100_4216
XCAM316273 XCAORF_0238
XCAM314565 XC_4113
XCAM190485 XCC4024
XAXO190486 XAC4149
XAUT78245
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116 TVN0646
TTUR377629 TERTU_2456
TTHE300852 TTHA0295
TTHE262724 TT_C1692
TTEN273068 TTE1900
TSP28240
TSP1755
TROS309801 TRD_1976
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014 TK2034
TFUS269800
TERY203124
TDEN326298
TDEN243275
TACI273075
SWOL335541
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459 STH924
STHE264199
SSUI391296 SSU98_0337
SSUI391295
SSP84588 SYNW2328OR2543
SSP64471 GSYN0558
SSP387093
SSP321332
SSP321327
SSP1148 SLL1388
SSP1131
SSOL273057 SSO1865
SSAP342451 SSP1056
SPYO370554 MGAS10750_SPY1574
SPYO370553 MGAS2096_SPY1541
SPYO370552 MGAS10270_SPY1582
SPYO370551 MGAS9429_SPY1515
SPYO319701 M28_SPY1503
SPYO293653 M5005_SPY1514
SPYO286636 M6_SPY1507
SPYO198466 SPYM3_1546
SPYO193567 SPS0320
SPYO186103 SPYM18_1850
SPYO160490 SPY1780
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMAR399550
SGOR29390
SERY405948 SACE_4517
SELO269084
SCO
SAVE227882
SARE391037
SALA317655
SAGA211110 GBS1721
SAGA208435 SAG_1677
SAGA205921 SAK_1689
SACI330779
RSP101510 RHA1_RO01263
RSOL267608
RSAL288705
RALB246199
PTOR263820
PTHE370438
PSP56811
PSP312153 PNUC_0463
PRUM264731
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PISL384616
PINT246198
PHOR70601 PH0823
PHAL326442 PSHAA1851
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PCAR338963 PCAR_2016
PAST100379
PARS340102 PARS_2339
PARC259536
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109 OB2190
OCAR504832 OCAR_6832
NWIN323098 NWI_2683
NSP387092
NSP35761
NSP103690 ALL1122
NSEN222891
NOCE323261 NOC_2210
NMEN374833 NMCC_1407
NMEN272831 NMC1431
NMEN122587 NMA1703
NMEN122586 NMB_1500
NGON242231 NGO0959
NFAR247156
NARO279238 SARO_0396
MXAN246197 MXAN_3966
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTBRV
MTBCDC
MSYN262723
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549 MSED_1589
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAR444158 MMARC6_0308
MMAR426368 MMARC7_1606
MMAR394221
MMAR267377 MMP0585
MMAG342108
MLOT266835
MLEP272631
MKAN190192
MHYO295358
MHYO262722
MHYO262719
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MBOV410289
MBOV233413
MAVI243243
MART243272
MAER449447 MAE_58660
MABS561007
LXYL281090
LWEL386043 LWE1593
LREU557436
LMON265669
LMON169963
LMES203120 LEUM_1284
LLAC272623 L102093
LJOH257314
LINT363253
LINT267671 LIC_12484
LINT189518 LA1212
LINN272626 LIN1615
LHEL405566
LGAS324831
LDEL390333 LDB0718
LDEL321956 LBUL_0650
LCHO395495 LCHO_3338
LCAS321967
LBRE387344 LVIS_1265
LBOR355277
LBOR355276
LBIF456481 LEPBI_I2649
LBIF355278 LBF_2568
LACI272621
KRAD266940
JSP375286 MMA_0433
ILOI283942 IL1305
HPYL85963
HPYL357544
HPY
HNEP81032
HMOD498761
HHEP235279
HHAL349124
HBUT415426 HBUT_0694
HAUR316274 HAUR_1083
HACI382638
GURA351605 GURA_2933
GTHE420246 GTNG_2680
GOXY290633
GBET391165
FSUC59374
FSP1855
FSP106370
FPHI484022 FPHI_0748
FNUC190304
FNOD381764
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DSP255470
DRAD243230
DPSY177439
DOLE96561
DNOD246195 DNO_0011
DETH243164
CVIO243365 CV_4300
CVES412965
CTRA471473
CTRA471472
CTET212717
CSUL444179
CSP78 CAUL_1934
CRUT413404
CPSY167879 CPS_1986
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964 CMS2301
CMAQ397948 CMAQ_1851
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK0100
CHYD246194 CHY_0082
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164 CE2791
CDIP257309
CDIF272563 CD0812
CDES477974
CCUR360105
CCON360104
CCAV227941
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402
CAULO
CACE272562
CABO218497
BXEN266265
BWEI315730
BTUR314724
BTRI382640
BTHU412694
BTHU281309
BTHE226186
BTHA271848 BTH_I2484
BSUB
BSP107806
BQUI283165
BPUM315750
BPSE320373
BPSE320372
BPSE272560
BPET94624 BPET0649
BPER257313 BP1315
BPAR257311 BPP2905
BMAL320389
BMAL320388
BMAL243160
BLON206672
BLIC279010
BHER314723
BHEN283166
BHAL272558 BH3184
BGAR290434
BFRA295405
BFRA272559
BCLA66692 ABC3200
BCIC186490
BCER572264
BCER405917
BCER315749 BCER98_3301
BCER288681
BCER226900
BBUR224326
BBRO257310 BB2875
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
AYEL322098
AVAR240292 AVA_4695
AURANTIMONAS
ASP62928
ASP1667
APHA212042
APER272557
AORE350688
ANAE240017
AMET293826
AMAR234826
ALAI441768
AFUL224325 AF_0826
AEHR187272 MLG_1314
ACRY349163
ACEL351607
ACAU438753
ABUT367737
ABAU360910
ABAC204669 ACID345_0071
AAVE397945 AAVE_3154
AAUR290340


Organism features enriched in list (features available for 346 out of the 372 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 2.055e-67492
Arrangment:Clusters 0.0000526217
Arrangment:Pairs 0.002533254112
Disease:Food_poisoning 0.008751099
Disease:Gastroenteritis 0.0068953313
Disease:Wide_range_of_infections 0.00301271111
Endospores:No 0.0005228143211
Endospores:Yes 1.519e-74853
GC_Content_Range4:0-40 1.318e-9160213
GC_Content_Range4:40-60 1.049e-7103224
GC_Content_Range7:0-30 3.782e-74347
GC_Content_Range7:30-40 0.0001747117166
GC_Content_Range7:50-60 2.262e-740107
Genome_Size_Range5:0-2 2.486e-9122155
Genome_Size_Range5:4-6 1.145e-976184
Genome_Size_Range9:0-1 4.957e-72727
Genome_Size_Range9:1-2 0.000035195128
Genome_Size_Range9:4-5 4.407e-73596
Genome_Size_Range9:5-6 0.00299834188
Gram_Stain:Gram_Neg 7.930e-15153333
Gram_Stain:Gram_Pos 4.024e-13125150
Habitat:Multiple 0.007624894178
Motility:No 0.0002586107151
Motility:Yes 0.0001701138267
Optimal_temp.:30-37 0.0011067418
Oxygen_Req:Anaerobic 0.005838771102
Oxygen_Req:Facultative 2.296e-1280201
Oxygen_Req:Microaerophilic 0.00546691618
Shape:Rod 1.339e-6179347
Shape:Sphere 0.00356871719
Shape:Spiral 3.148e-63234
Temp._range:Hyperthermophilic 0.00306152023
Temp._range:Mesophilic 0.0058573270473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
AST-PWY (arginine degradation II (AST pathway))120630.4427
PWY-6196 (serine racemization)102570.4402
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)176770.4253
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)218870.4236
GALACTITOLCAT-PWY (galactitol degradation)73450.4173
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50350.4028



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6699   G6334   EG11390   
G70310.9985860.9987360.999413
G66990.9997710.998976
G63340.999056
EG11390



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PAIRWISE BLAST SCORES:

  G7031   G6699   G6334   EG11390   
G70310.0f0--7.6e-21
G6699-0.0f05.2e-22-
G6334-5.2e-220.0f0-
EG113907.6e-21--0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7031 (centered at G7031)
G6699 (centered at G6699)
G6334 (centered at G6334)
EG11390 (centered at EG11390)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7031   G6699   G6334   EG11390   
111/623242/623277/623163/623
AAEO224324:0:Tyes-00-
AAVE397945:0:Tyes---0
ABAC204669:0:Tyes--0-
ABOR393595:0:Tyes0000
ADEH290397:0:Tyes-1230-
AEHR187272:0:Tyes--0-
AFER243159:0:Tyes-0-49
AFUL224325:0:Tyes--0-
AHYD196024:0:Tyes0327932790
AMAR329726:5:Tyes--0-
AMAR329726:9:Tyes-0--
APLE416269:0:Tyes0--0
APLE434271:0:Tno0--0
ASAL382245:5:Tyes08258250
ASP232721:2:Tyes-000
ASP62977:0:Tyes07290-
ASP76114:2:Tyes-9240-
AVAR240292:3:Tyes-0--
BABO262698:1:Tno-00-
BAMB339670:3:Tno-5900-
BAMB398577:3:Tno-4360-
BBRO257310:0:Tyes--0-
BCAN483179:1:Tno-00-
BCEN331271:0:Tno-0--
BCEN331271:2:Tno--0-
BCEN331272:3:Tyes-4510-
BCER315749:1:Tyes0---
BCLA66692:0:Tyes--0-
BHAL272558:0:Tyes-0--
BJAP224911:0:Fyes-00-
BMEL224914:1:Tno-00-
BMEL359391:1:Tno-00-
BOVI236:1:Tyes-00-
BPAR257311:0:Tno--0-
BPER257313:0:Tyes--0-
BPET94624:0:Tyes--0-
BSP36773:1:Tyes---0
BSP36773:2:Tyes-6270-
BSP376:0:Tyes-00-
BSUI204722:1:Tyes-00-
BSUI470137:1:Tno-00-
BTHA271848:1:Tno--0-
BVIE269482:5:Tyes0--660
BVIE269482:7:Tyes-4020-
CBUR227377:1:Tyes6506565
CBUR360115:1:Tno0190800
CBUR434922:2:Tno0000
CCHL340177:0:Tyes-0109-
CDIF272563:1:Tyes-0--
CEFF196164:0:Fyes-0--
CHYD246194:0:Tyes--0-
CJAP155077:0:Tyes--00
CJEI306537:0:Tyes-0--
CMAQ397948:0:Tyes--0-
CMET456442:0:Tyes-0-0
CMIC31964:2:Tyes-0--
CPSY167879:0:Tyes-0--
CSAL290398:0:Tyes1330133001330
CSP501479:8:Fyes-00-
CSP78:2:Tyes--0-
CTEP194439:0:Tyes-6810895
CVIO243365:0:Tyes---0
DARO159087:0:Tyes--14120
DDES207559:0:Tyes-0494-
DGEO319795:0:Tyes0---
DGEO319795:1:Tyes-00-
DHAF138119:0:Tyes-00-
DNOD246195:0:Tyes---0
DRED349161:0:Tyes-00-
DSHI398580:5:Tyes-00-
DSP216389:0:Tyes-00-
DVUL882:1:Tyes-10620-
ECAR218491:0:Tyes0174117410
ECOL199310:0:Tno1573109503527
ECOL316407:0:Tno130477903177
ECOL331111:6:Tno144389103218
ECOL362663:0:Tno118975902944
ECOL364106:1:Tno1485100703393
ECOL405955:2:Tyes123683703001
ECOL409438:6:Tyes147580303146
ECOL413997:0:Tno128577902790
ECOL439855:4:Tno628111103053
ECOL469008:0:Tno1514199727930
ECOL481805:0:Tno1532206228300
ECOL585034:0:Tno137378603015
ECOL585035:0:Tno125481903143
ECOL585055:0:Tno146591303294
ECOL585056:2:Tno149295203290
ECOL585057:0:Tno595114003421
ECOL585397:0:Tno150594003469
ECOL83334:0:Tno1997138203811
ECOLI:0:Tno132478602940
ECOO157:0:Tno2041146903831
EFER585054:1:Tyes048713512354
ESP42895:0:Tyes-0--
ESP42895:1:Tyes1332-02788
FPHI484022:1:Tyes--0-
FRANT:0:Tno--00
FTUL351581:0:Tno--00
FTUL393011:0:Tno--00
FTUL393115:0:Tyes--00
FTUL401614:0:Tyes--00
FTUL418136:0:Tno--00
FTUL458234:0:Tno--00
GFOR411154:0:Tyes1415001415
GKAU235909:1:Tyes-00-
GMET269799:1:Tyes-00-
GSUL243231:0:Tyes-00-
GTHE420246:1:Tyes--0-
GURA351605:0:Tyes--0-
GVIO251221:0:Tyes0-1252-
HARS204773:0:Tyes-560-
HAUR316274:2:Tyes-0--
HBUT415426:0:Tyes0---
HCHE349521:0:Tyes0000
HDUC233412:0:Tyes0--0
HINF281310:0:Tyes0641-0
HINF374930:0:Tyes5720-572
HINF71421:0:Tno0595-0
HMAR272569:7:Tyes--0-
HMAR272569:8:Tyes9730--
HMUK485914:1:Tyes-7920-
HSAL478009:4:Tyes-000
HSOM205914:1:Tyes2440-244
HSOM228400:0:Tno0294-0
HSP64091:2:Tno-000
HWAL362976:1:Tyes-9880-
IHOS453591:0:Tyes-00-
ILOI283942:0:Tyes-0--
JSP290400:1:Tyes-00-
JSP375286:0:Tyes--0-
KPNE272620:2:Tyes1129045632749
LBIF355278:2:Tyes-0--
LBIF456481:2:Tno-0--
LBRE387344:2:Tyes--0-
LCHO395495:0:Tyes-0--
LDEL321956:0:Tyes---0
LDEL390333:0:Tyes---0
LINN272626:1:Tno---0
LINT189518:1:Tyes-0--
LINT267671:1:Tno-0--
LLAC272622:5:Tyes-0517-
LLAC272623:0:Tyes-0--
LMES203120:1:Tyes-0--
LPLA220668:0:Tyes-0878-
LPNE272624:0:Tno60400604
LPNE297245:1:Fno51300513
LPNE297246:1:Fyes50000500
LPNE400673:0:Tno0136413640
LSAK314315:0:Tyes-08370
LSPH444177:1:Tyes-0-0
LWEL386043:0:Tyes---0
MACE188937:0:Tyes-7870-
MAEO419665:0:Tyes-00-
MAER449447:0:Tyes-0--
MAQU351348:2:Tyes0101600
MBAR269797:1:Tyes-026722497
MBUR259564:0:Tyes-00-
MCAP243233:0:Tyes-140-
MHUN323259:0:Tyes-3040304
MJAN243232:2:Tyes-00-
MLAB410358:0:Tyes-00-
MMAR267377:0:Tyes--0-
MMAR368407:0:Tyes-00-
MMAR402880:1:Tyes-00-
MMAR426368:0:Tyes--0-
MMAR444158:0:Tyes--0-
MMAZ192952:0:Tyes-7250-
MPET420662:1:Tyes-23640-
MSED399549:0:Tyes---0
MSP266779:3:Tyes-00-
MSP400668:0:Tyes0000
MSP409:2:Tyes-00-
MSTA339860:0:Tyes-7047040
MSUC221988:0:Tyes20780020
MTHE187420:0:Tyes-00-
MXAN246197:0:Tyes0---
NARO279238:0:Tyes--0-
NEUR228410:0:Tyes0000
NEUT335283:2:Tyes7717714370
NGON242231:0:Tyes--0-
NHAM323097:2:Tyes-00-
NMEN122586:0:Tno--0-
NMEN122587:0:Tyes--0-
NMEN272831:0:Tno--0-
NMEN374833:0:Tno--0-
NMUL323848:3:Tyes9759750975
NOCE323261:1:Tyes--0-
NPHA348780:2:Tyes-239202559
NSP103690:6:Tyes-0--
NWIN323098:0:Tyes-0--
OANT439375:5:Tyes-00-
OCAR504832:0:Tyes-0--
OIHE221109:0:Tyes-0--
PAER208963:0:Tyes0-00
PAER208964:0:Tno0-00
PARS340102:0:Tyes--0-
PATL342610:0:Tyes0000
PCAR338963:0:Tyes--0-
PENT384676:0:Tyes0000
PFLU205922:0:Tyes-000
PFLU216595:1:Tyes0000
PFLU220664:0:Tyes0000
PHAL326442:1:Tyes-0--
PHOR70601:0:Tyes--0-
PING357804:0:Tyes268164816480
PLUM243265:0:Fyes0196419620
PLUT319225:0:Tyes-00-
PMEN399739:0:Tyes0000
PMUL272843:1:Tyes8121950812
PNAP365044:8:Tyes0808
PPEN278197:0:Tyes-08900
PPRO298386:2:Tyes02622620
PPUT160488:0:Tno0000
PPUT351746:0:Tyes0000
PPUT76869:0:Tno0000
PSP117:0:Tyes-03574-
PSP296591:2:Tyes0993080
PSP312153:0:Tyes-0--
PSTU379731:0:Tyes0-00
PSYR205918:0:Tyes0000
PSYR223283:2:Tyes0000
RAKA293614:0:Fyes-00-
RBEL336407:0:Tyes-00-
RBEL391896:0:Fno-00-
RCAN293613:0:Fyes-00-
RCAS383372:0:Tyes-1-0
RCON272944:0:Tno-00-
RDEN375451:4:Tyes-310-
RETL347834:0:Tyes--0-
RETL347834:5:Tyes-0--
REUT264198:3:Tyes-0952117
REUT381666:2:Tyes-02226-
RFEL315456:2:Tyes-00-
RFER338969:1:Tyes-101001282
RLEG216596:6:Tyes-00-
RMAS416276:1:Tyes-00-
RMET266264:1:Tyes--056
RPAL258594:0:Tyes-00-
RPAL316055:0:Tyes-00-
RPAL316056:0:Tyes-00-
RPAL316057:0:Tyes-00-
RPAL316058:0:Tyes-00-
RPOM246200:1:Tyes-15530-
RPRO272947:0:Tyes-00-
RRIC392021:0:Fno-00-
RRIC452659:0:Tyes-00-
RRUB269796:1:Tyes-00-
RSP101510:3:Fyes-0--
RSP357808:0:Tyes01--
RSPH272943:3:Tyes-00-
RSPH349101:1:Tno-00-
RSPH349102:4:Tyes-00-
RTYP257363:0:Tno-00-
RXYL266117:0:Tyes-064-
SACI56780:0:Tyes-00-
SAGA205921:0:Tno--0-
SAGA208435:0:Tno--0-
SAGA211110:0:Tyes--0-
SAUR158878:1:Tno--00
SAUR158879:1:Tno--00
SAUR196620:0:Tno--00
SAUR273036:0:Tno--00
SAUR282458:0:Tno--00
SAUR282459:0:Tno--00
SAUR359786:1:Tno--00
SAUR359787:1:Tno--00
SAUR367830:3:Tno--00
SAUR418127:0:Tyes--00
SAUR426430:0:Tno--00
SAUR93061:0:Fno--00
SAUR93062:1:Tno--00
SBAL399599:3:Tyes-00-
SBAL402882:1:Tno-00-
SBOY300268:1:Tyes598114402861
SDEG203122:0:Tyes0-00
SDEN318161:0:Tyes-00-
SDYS300267:1:Tyes62287802849
SENT209261:0:Tno056812372838
SENT220341:0:Tno131367103216
SENT295319:0:Tno027711262412
SENT321314:2:Tno1310102002925
SENT454169:2:Tno1370107403061
SEPI176279:1:Tyes-000
SEPI176280:0:Tno-000
SERY405948:0:Tyes-0--
SFLE198214:0:Tyes2889124102889
SFLE373384:0:Tno1299118102795
SFUM335543:0:Tyes-4410-
SGLO343509:3:Tyes0--0
SHAE279808:0:Tyes--40
SHAL458817:0:Tyes-00-
SHIGELLA:0:Tno327182703271
SLAC55218:1:Fyes-00-
SLOI323850:0:Tyes-00-
SMED366394:3:Tyes-00-
SMEL266834:2:Tyes-00-
SMUT210007:0:Tyes--00
SONE211586:1:Tyes-00-
SPEA398579:0:Tno-6760-
SPRO399741:1:Tyes1166002890
SPYO160490:0:Tno--0-
SPYO186103:0:Tno--0-
SPYO193567:0:Tno--0-
SPYO198466:0:Tno--0-
SPYO286636:0:Tno--0-
SPYO293653:0:Tno--0-
SPYO319701:0:Tyes--0-
SPYO370551:0:Tno--0-
SPYO370552:0:Tno--0-
SPYO370553:0:Tno--0-
SPYO370554:0:Tyes--0-
SRUB309807:1:Tyes-01241041
SSAP342451:2:Tyes---0
SSED425104:0:Tyes-00-
SSOL273057:0:Tyes---0
SSON300269:1:Tyes631113103014
SSP1148:0:Tyes--0-
SSP292414:2:Tyes-000
SSP644076:7:Fyes-000
SSP64471:0:Tyes--0-
SSP84588:0:Tyes--0-
SSP94122:1:Tyes-00-
SSUI391296:0:Tyes--0-
STHE292459:0:Tyes-0--
STYP99287:1:Tyes1300102402953
TCRU317025:0:Tyes0000
TDEN292415:0:Tyes--0308
TELO197221:0:Tyes-0-2261
TKOD69014:0:Tyes--0-
TROS309801:1:Tyes-0--
TTEN273068:0:Tyes-0--
TTHE262724:1:Tyes-0--
TTHE300852:2:Tyes-0--
TTUR377629:0:Tyes0---
TVOL273116:0:Tyes--0-
UMET351160:0:Tyes-02698-
VCHO:0:Tyes03813810
VCHO345073:1:Tno03583580
VEIS391735:1:Tyes-5289700
VFIS312309:2:Tyes01891890
VPAR223926:1:Tyes02432430
VVUL196600:2:Tyes03973970
VVUL216895:1:Tno42100421
XAXO190486:0:Tyes-0--
XCAM190485:0:Tyes-0--
XCAM314565:0:Tno-0--
XCAM316273:0:Tno-0--
XCAM487884:0:Tno-0--
YENT393305:1:Tyes0--1461
YPES187410:5:Tno0--0
YPES214092:3:Tno0--0
YPES349746:2:Tno0--0
YPES360102:3:Tyes0--0
YPES377628:2:Tno0--0
YPES386656:2:Tno0--0
YPSE273123:2:Tno0--0
YPSE349747:2:Tno0--0



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