CANDIDATE ID: 872

CANDIDATE ID: 872

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9942183e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG12882 (gsp) (b2988)
   Products of gene:
     - GSP-MONOMER (Gsp)
     - GSP-CPLX (fused glutathionylspermidine amidase / glutathionylspermidine synthetase)
       Reactions:
        spermidine + glutathione + ATP  ->  glutathionylspermidine + ADP + phosphate + 2 H+
         In pathways
         PWY-4121 (PWY-4121)
        glutathionylspermidine + H2O  ->  glutathione + spermidine

- EG11812 (yjfC) (b4186)
   Products of gene:
     - EG11812-MONOMER (predicted synthetase/amidase)

- EG11165 (ygiC) (b3038)
   Products of gene:
     - EG11165-MONOMER (predicted enzyme)

- EG11164 (ygiB) (b3037)
   Products of gene:
     - EG11164-MONOMER (conserved outer membrane protein)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 118
Effective number of orgs (counting one per cluster within 468 clusters): 75

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
WSUC273121 ncbi Wolinella succinogenes DSM 17403
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
TTUR377629 ncbi Teredinibacter turnerae T79014
TERY203124 ncbi Trichodesmium erythraeum IMS1013
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12513
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP387093 ncbi Sulfurovum sp. NBC37-13
SSON300269 ncbi Shigella sonnei Ss0464
SPRO399741 ncbi Serratia proteamaculans 5684
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23383
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SBOY300268 ncbi Shigella boydii Sb2274
SAVE227882 ncbi Streptomyces avermitilis MA-46803
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170293
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.13
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332093
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
REUT381666 ncbi Ralstonia eutropha H163
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30003
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PPRO298386 ncbi Photobacterium profundum SS94
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 373
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1253
PFLU220664 ncbi Pseudomonas fluorescens Pf-53
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-13
PENT384676 ncbi Pseudomonas entomophila L483
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
NFAR247156 ncbi Nocardia farcinica IFM 101523
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E3
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL13
MEXT419610 ncbi Methylobacterium extorquens PA13
MABS561007 ncbi Mycobacterium abscessus ATCC 199773
KRAD266940 ncbi Kineococcus radiotolerans SRS302163
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
HPYL85963 ncbi Helicobacter pylori J993
HPYL357544 ncbi Helicobacter pylori HPAG13
HPY ncbi Helicobacter pylori 266953
HINF71421 ncbi Haemophilus influenzae Rd KW203
HINF374930 ncbi Haemophilus influenzae PittEE3
HINF281310 ncbi Haemophilus influenzae 86-028NP3
HHEP235279 ncbi Helicobacter hepaticus ATCC 514493
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HACI382638 ncbi Helicobacter acinonychis Sheeba3
GOXY290633 ncbi Gluconobacter oxydans 621H3
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CJEJ407148 ncbi Campylobacter jejuni jejuni 811163
CJEJ360109 ncbi Campylobacter jejuni doylei 269.973
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1763
CJEJ195099 ncbi Campylobacter jejuni RM12213
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111683
CJAP155077 Cellvibrio japonicus4
CFET360106 ncbi Campylobacter fetus fetus 82-403
CCUR360105 ncbi Campylobacter curvus 525.923
CCON360104 ncbi Campylobacter concisus 138263
CAULO ncbi Caulobacter crescentus CB154
BSP376 Bradyrhizobium sp.3
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
ASP1667 Arthrobacter sp.3
ABUT367737 ncbi Arcobacter butzleri RM40183
AAUR290340 ncbi Arthrobacter aurescens TC13


Names of the homologs of the genes in the group in each of these orgs
  EG12882   EG11812   EG11165   EG11164   
YPSE349747 YPSIP31758_0571YPSIP31758_0571YPSIP31758_0571YPSIP31758_0572
YPSE273123 YPTB3402YPTB3402YPTB3402YPTB3401
YPES386656 YPDSF_0443YPDSF_0443YPDSF_0443YPDSF_0444
YPES377628 YPN_0519YPN_0519YPN_0519YPN_0520
YPES360102 YPA_3131YPA_3131YPA_3131YPA_3130
YPES349746 YPANGOLA_A0287YPANGOLA_A0287YPANGOLA_A0287YPANGOLA_A0286
YPES214092 YPO0660YPO0660YPO0660YPO0661
YPES187410 Y3518Y3518Y3518Y3517
YENT393305 YE3667YE3667YE3667YE3666
XORY360094 XOOORF_4073XOOORF_4073XOOORF_4073XOOORF_4074
XORY342109 XOO1152XOO1152XOO1152XOO1151
XORY291331 XOO1252XOO1252XOO1252XOO1251
XCAM487884 XCC-B100_1323XCC-B100_1323XCC-B100_1323XCC-B100_1322
XCAM316273 XCAORF_3209XCAORF_3209XCAORF_3209XCAORF_3210
XCAM314565 XC_1277XC_1277XC_1277XC_1276
XCAM190485 XCC2833XCC2833XCC2833XCC2834
XAXO190486 XAC3002XAC3002XAC3002XAC3003
WSUC273121 WS0574WS0574WS0574
VVUL216895 VV1_2177VV1_2177VV1_2177VV1_2176
VVUL196600 VV2267VV2267VV2267VV2268
VPAR223926 VP1067VP1067VP1067VP1066
TTUR377629 TERTU_4210TERTU_4210TERTU_4210TERTU_4211
TERY203124 TERY_1876TERY_1876TERY_1876
TDEN326298 TMDEN_1471TMDEN_1471TMDEN_1471
STYP99287 STM3139STM4376STM3188STM3187
SSP387093 SUN_0613SUN_0613SUN_0613
SSON300269 SSO_3133SSO_4368SSO_3175SSO_3174
SPRO399741 SPRO_4275SPRO_4275SPRO_4275SPRO_4274
SHIGELLA GSPYJFCYGICYGIB
SGLO343509 SG0264SG0264SG0264SG0265
SFLE373384 SFV_3041SFV_3082SFV_3082SFV_3081
SFLE198214 AAN44513.1AAN45756.1AAN44556.1AAN44555.1
SERY405948 SACE_0157SACE_0157SACE_0157
SENT454169 SEHA_C3386SEHA_C4794SEHA_C3439SEHA_C3438
SENT321314 SCH_3080SCH_3132SCH_3132SCH_3131
SENT295319 SPA3007SPA4193SPA3057SPA3056
SENT220341 STY3310STY4732STY3366STY3365
SENT209261 T3060T4427T3109T3108
SDYS300267 SDY_3085SDY_4403SDY_3202SDY_3203
SBOY300268 SBO_2875SBO_4269SBO_2896SBO_2895
SAVE227882 SAV3421SAV3421SAV3421
RSPH349102 RSPH17025_3591RSPH17025_3591RSPH17025_3592
RSPH349101 RSPH17029_3071RSPH17029_3071RSPH17029_3070
RSPH272943 RSP_3426RSP_3426RSP_3425
RSAL288705 RSAL33209_1943RSAL33209_1943RSAL33209_1943
RRUB269796 RRU_A3723RRU_A3723RRU_A3723
RPAL316058 RPB_3915RPB_3915RPB_3915
RLEG216596 PRL120092PRL120092PRL120092PRL120091
REUT381666 H16_A0042H16_A0042H16_A0042
PSYR223283 PSPTO_3780PSPTO_3780PSPTO_3780
PSYR205918 PSYR_1698PSYR_1698PSYR_1698PSYR_1697
PPRO298386 PBPRB0040PBPRB0040PBPRB0040PBPRB0051
PLUM243265 PLU4309PLU3957PLU3957PLU3956
PING357804 PING_1235PING_1235PING_1235
PHAL326442 PSHAA2455PSHAA2455PSHAA2455
PFLU220664 PFL_5716PFL_5716PFL_5716
PFLU216595 PQBR0084PQBR0084PQBR0084PQBR0083
PFLU205922 PFL_5048PFL_5048PFL_5048
PENT384676 PSEEN1824PSEEN1824PSEEN1824
PATL342610 PATL_1219PATL_1219PATL_1219PATL_1220
NFAR247156 NFA41710NFA41710NFA41710
NARO279238 SARO_2359SARO_2359SARO_2359
MSUC221988 MS0671MS0671MS0671
MSP409 M446_5405M446_5405M446_5405
MSP400668 MMWYL1_0216MMWYL1_0216MMWYL1_0216
MEXT419610 MEXT_4658MEXT_4658MEXT_4658
MABS561007 MAB_0043MAB_0043MAB_0043
KRAD266940 KRAD_2757KRAD_2757KRAD_2757
KPNE272620 GKPORF_B2752GKPORF_B2783GKPORF_B2783GKPORF_B2782
HPYL85963 JHP0218JHP0218JHP0218
HPYL357544 HPAG1_0236HPAG1_0236HPAG1_0236
HPY HP0233HP0233HP0233
HINF71421 HI_0929HI_0929HI_0929
HINF374930 CGSHIEE_07330CGSHIEE_07330CGSHIEE_07330
HINF281310 NTHI1100NTHI1100NTHI1100
HHEP235279 HH_0015HH_0015HH_0015
HCHE349521 HCH_06602HCH_06602HCH_06602HCH_06601
HACI382638 HAC_0310HAC_0310HAC_0310
GOXY290633 GOX0550GOX0550GOX0550
ESP42895 ENT638_3393ENT638_3450ENT638_3450ENT638_3449
EFER585054 EFER_2930EFER_4239EFER_2979EFER_2978
ECOO157 GSPYJFCYGICYGIB
ECOL83334 ECS3873ECS5162ECS3926ECS3925
ECOL585397 ECED1_3638ECED1_3703ECED1_3703ECED1_3702
ECOL585057 ECIAI39_3484ECIAI39_4651ECIAI39_3534ECIAI39_3533
ECOL585056 ECUMN_3472ECUMN_4719ECUMN_3522ECUMN_3521
ECOL585055 EC55989_3404EC55989_4743EC55989_3453EC55989_3452
ECOL585035 ECS88_3370ECS88_4772ECS88_3431ECS88_3430
ECOL585034 ECIAI1_3137ECIAI1_4419ECIAI1_3185ECIAI1_3184
ECOL481805 ECOLC_0705ECOLC_3827ECOLC_0660ECOLC_0661
ECOL469008 ECBD_0750ECBD_3848ECBD_0702ECBD_0703
ECOL439855 ECSMS35_3274ECSMS35_4657ECSMS35_3332ECSMS35_3331
ECOL413997 ECB_02864ECB_04053ECB_02910ECB_02909
ECOL409438 ECSE_3273ECSE_4484ECSE_3318ECSE_3317
ECOL405955 APECO1_3433APECO1_2206APECO1_3376APECO1_3377
ECOL364106 UTI89_C3410UTI89_C4786UTI89_C3472UTI89_C3471
ECOL362663 ECP_3073ECP_4431ECP_3129ECP_3128
ECOL331111 ECE24377A_3455ECE24377A_4746ECE24377A_3502ECE24377A_3501
ECOL316407 ECK2982:JW2956:B2988ECK4182:JW4144:B4186ECK3029:JW3006:B3038ECK3028:JW5927:B3037
ECOL199310 C3725C5274C3784C3783
ECAR218491 ECA0328ECA0328ECA0328ECA0329
CSP78 CAUL_1405CAUL_1405CAUL_1405CAUL_1400
CSP501479 CSE45_5146CSE45_5146CSE45_5146CSE45_5145
CJEJ407148 C8J_0348C8J_0348C8J_0348
CJEJ360109 JJD26997_1585JJD26997_1585JJD26997_1585
CJEJ354242 CJJ81176_0396CJJ81176_0396CJJ81176_0396
CJEJ195099 CJE_0421CJE_0421CJE_0421
CJEJ192222 CJ0372CJ0372CJ0372
CJAP155077 CJA_2764CJA_2764CJA_2764CJA_2765
CFET360106 CFF8240_1661CFF8240_1661CFF8240_1661
CCUR360105 CCV52592_1541CCV52592_1541CCV52592_1541
CCON360104 CCC13826_1647CCC13826_1647CCC13826_1647
CAULO CC2361CC2361CC2361CC2366
BSP376 BRADO1482BRADO1482BRADO1482
BJAP224911 BLL2198BLL2198BLL2198
ASP1667 ARTH_3053ARTH_3053ARTH_3053
ABUT367737 ABU_1068ABU_1068ABU_1068
AAUR290340 AAUR_3026AAUR_3026AAUR_3026


Organism features enriched in list (features available for 109 out of the 118 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Singles 0.000363069286
Disease:Bubonic_plague 0.000038166
Disease:Dysentery 0.000038166
Disease:Gastroenteritis 1.177e-81213
Disease:Rice_bacterial_blight_disease 0.006389533
Disease:chronic_bronchitis 0.006389533
Endospores:Yes 0.0037461353
GC_Content_Range4:0-40 3.098e-718213
GC_Content_Range4:40-60 7.174e-662224
GC_Content_Range7:0-30 0.0004532147
GC_Content_Range7:30-40 0.000280717166
GC_Content_Range7:50-60 6.402e-739107
Genome_Size_Range5:0-2 0.000219715155
Genome_Size_Range5:2-4 6.035e-1110197
Genome_Size_Range5:4-6 3.512e-1570184
Genome_Size_Range9:1-2 0.006811515128
Genome_Size_Range9:2-3 6.890e-67120
Genome_Size_Range9:3-4 0.0000483377
Genome_Size_Range9:4-5 9.171e-73696
Genome_Size_Range9:5-6 9.026e-73488
Gram_Stain:Gram_Neg 2.607e-1799333
Gram_Stain:Gram_Pos 1.475e-87150
Habitat:Multiple 0.000735247178
Habitat:Specialized 0.0037461353
Motility:No 5.137e-611151
Motility:Yes 8.020e-1383267
Optimal_temp.:25-30 0.00001481219
Oxygen_Req:Anaerobic 2.699e-73102
Oxygen_Req:Facultative 1.813e-761201
Oxygen_Req:Microaerophilic 0.00005401118
Pathogenic_in:Human 0.000740754213
Pathogenic_in:No 0.001220929226
Pathogenic_in:Plant 0.0091082715
Pathogenic_in:Rice 0.006389533
Shape:Coccus 0.0000179382
Shape:Rod 4.111e-685347
Shape:Spiral 0.00001541734
Temp._range:Mesophilic 0.0000429102473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 492
Effective number of orgs (counting one per cluster within 468 clusters): 388

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VFIS312309 ncbi Vibrio fischeri ES1140
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
VCHO345073 ncbi Vibrio cholerae O3950
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169610
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-10
SMUT210007 ncbi Streptococcus mutans UA1590
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SLAC55218 Ruegeria lacuscaerulensis0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)0
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT264198 ncbi Ralstonia eutropha JMP1340
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT76869 ncbi Pseudomonas putida GB-10
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER208964 ncbi Pseudomonas aeruginosa PAO10
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf40
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BVIE269482 ncbi Burkholderia vietnamiensis G40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BTHA271848 ncbi Burkholderia thailandensis E2640
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BSP36773 Burkholderia sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPSE320373 ncbi Burkholderia pseudomallei 6680
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BPSE272560 ncbi Burkholderia pseudomallei K962430
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BMAL320389 ncbi Burkholderia mallei NCTC 102470
BMAL320388 ncbi Burkholderia mallei SAVP10
BMAL243160 ncbi Burkholderia mallei ATCC 233440
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER226900 ncbi Bacillus cereus ATCC 145790
BCEN331272 ncbi Burkholderia cenocepacia HI24240
BCEN331271 ncbi Burkholderia cenocepacia AU 10540
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAMB398577 ncbi Burkholderia ambifaria MC40-60
BAMB339670 ncbi Burkholderia ambifaria AMMD0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4490
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AHYD196024 Aeromonas hydrophila dhakensis0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG12882   EG11812   EG11165   EG11164   
ZMOB264203
XFAS405440
XFAS183190
XFAS160492
XAUT78245
WPIP955
WPIP80849
VFIS312309
VEIS391735
VCHO345073
VCHO
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TELO197221
TDEN292415
TDEN243275
TCRU317025
TACI273075
SWOL335541
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP94122 SHEWANA3_0290
SSP84588
SSP64471
SSP644076
SSP321332
SSP321327
SSP292414
SSP1131
SSOL273057
SSED425104
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579
SONE211586
SMUT210007
SMEL266834
SMED366394
SMAR399550
SLOI323850
SLAC55218
SHAL458817
SHAE279808
SGOR29390
SFUM335543
SEPI176280
SEPI176279
SELO269084
SDEN318161
SDEG203122
SCO
SBAL402882
SBAL399599
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RXYL266117
RTYP257363
RSP357808
RSP101510
RSOL267608
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RFER338969
RFEL315456
REUT264198
RETL347834
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811
PSP312153
PSP296591
PSP117
PRUM264731
PPUT76869
PPUT351746
PPUT160488
PPEN278197
PNAP365044
PMUL272843
PMOB403833
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PCAR338963
PAST100379
PARS340102
PARC259536
PAER208964
PAER208963
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109
OCAR504832
OANT439375
NWIN323098
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLOT266835
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
JSP290400
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HHAL349124
HDUC233412
HBUT415426
HAUR316274
HARS204773
GVIO251221
GURA351605
GTHE420246
GSUL243231
GMET269799
GKAU235909
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRED349161
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DGEO319795
DETH243164
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSAL290398
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEI306537
CHYD246194
CHUT269798
CHOM360107
CGLU196627
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CDES477974
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT515621 CLJ_B3160
CBOT508765 CLL_A1760
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402 CBEI_0365
CACE272562
CABO218497
BXEN266265
BWEI315730 BCERKBAB4_1501
BVIE269482
BTUR314724
BTRI382640
BTHE226186
BTHA271848
BSUI470137
BSUI204722
BSUB
BSP36773
BSP107806
BQUI283165
BPUM315750
BPSE320373
BPSE320372
BPSE272560
BPET94624
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BMAL320389
BMAL320388
BMAL243160
BLON206672
BLIC279010
BHER314723
BHEN283166
BHAL272558
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER315749 BCER98_1313
BCER226900
BCEN331272
BCEN331271
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAMY326423
BAMB398577
BAMB339670
BAFZ390236
BABO262698
AYEL322098
AURANTIMONAS
ASP76114
ASP62977
ASP62928
ASP232721
ASAL382245
APLE434271
APLE416269
APHA212042
APER272557
AORE350688
ANAE240017
AMET293826
AMAR329726
AMAR234826
ALAI441768
AHYD196024
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ACAU438753
ABOR393595
ABAU360910
ABAC204669
AAVE397945
AAEO224324


Organism features enriched in list (features available for 462 out of the 492 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Singles 0.0004926211286
Disease:gastroenteritis 4.286e-8113
Endospores:No 0.0019562180211
GC_Content_Range4:0-40 0.0000346187213
GC_Content_Range4:40-60 0.0000520159224
GC_Content_Range7:0-30 0.00014564647
GC_Content_Range7:30-40 0.0088993141166
GC_Content_Range7:50-60 4.861e-667107
Genome_Size_Range5:0-2 0.0000165140155
Genome_Size_Range5:2-4 2.710e-12186197
Genome_Size_Range5:4-6 5.737e-19104184
Genome_Size_Range9:0-1 0.00158992727
Genome_Size_Range9:1-2 0.0013196113128
Genome_Size_Range9:2-3 5.319e-7113120
Genome_Size_Range9:3-4 0.00004727377
Genome_Size_Range9:4-5 1.739e-65896
Genome_Size_Range9:5-6 3.395e-104688
Gram_Stain:Gram_Neg 5.519e-12232333
Gram_Stain:Gram_Pos 0.0000404135150
Habitat:Aquatic 0.00875958091
Habitat:Multiple 0.0000924124178
Habitat:Specialized 0.00132635053
Motility:No 9.588e-7139151
Motility:Yes 5.275e-15174267
Optimal_temp.:25-30 0.0000462719
Oxygen_Req:Anaerobic 2.144e-899102
Oxygen_Req:Facultative 1.973e-8133201
Oxygen_Req:Microaerophilic 0.0001499718
Pathogenic_in:Human 0.0012740155213
Pathogenic_in:No 0.0005655194226
Shape:Coccus 0.00001637882
Shape:Rod 1.447e-6253347
Shape:Spiral 0.00006701734
Temp._range:Hyperthermophilic 0.00422222323
Temp._range:Mesophilic 0.0000189360473
Temp._range:Thermophilic 0.00022013535



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-4121 (glutathionylspermidine biosynthesis)77660.6400
GALACTITOLCAT-PWY (galactitol degradation)73520.4862
PWY-6507 (5-dehydro-4-deoxy-D-glucuronate degradation)76510.4582
PWY0-981 (taurine degradation IV)106610.4461
KDOSYN-PWY (KDO transfer to lipid IVA I)180830.4420
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)179820.4354
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)176810.4337
PWY-5148 (acyl-CoA hydrolysis)227930.4257
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)195850.4246
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)218900.4184
PWY0-1355 (formate to trimethylamine N-oxide electron transfer)31280.4169
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50370.4151
GLYCOCAT-PWY (glycogen degradation I)246960.4140
PWY0-1182 (trehalose degradation II (trehalase))70450.4117
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911050.4096
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45340.4032
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961050.4014



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11812   EG11165   EG11164   
EG128820.9996570.999690.999082
EG118120.9997110.999048
EG111650.999343
EG11164



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PAIRWISE BLAST SCORES:

  EG12882   EG11812   EG11165   EG11164   
EG128820.0f01.4e-257.1e-23-
EG118122.8e-230.0f03.3e-98-
EG111657.1e-231.9e-1040.0f0-
EG11164---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11164 EG11165 (centered at EG11165)
EG11812 (centered at EG11812)
EG12882 (centered at EG12882)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12882   EG11812   EG11165   EG11164   
119/623131/623134/62373/623
AAUR290340:2:Tyes000-
ABUT367737:0:Tyes000-
ASP1667:3:Tyes000-
AVAR240292:2:Tyes-00-
BANT260799:0:Tno-00-
BANT261594:2:Tno-00-
BANT568206:2:Tyes-00-
BANT592021:2:Tno-00-
BCER288681:0:Tno-00-
BCER315749:1:Tyes--0-
BCER405917:1:Tyes-00-
BCER572264:1:Tno-00-
BJAP224911:0:Fyes000-
BSP376:0:Tyes000-
BTHU281309:1:Tno-00-
BTHU412694:1:Tno-00-
BWEI315730:4:Tyes--0-
CAULO:0:Tyes0005
CBEI290402:0:Tyes--0-
CBOT508765:1:Tyes0---
CBOT515621:2:Tyes0---
CCON360104:2:Tyes000-
CCUR360105:0:Tyes000-
CFET360106:0:Tyes000-
CJAP155077:0:Tyes0001
CJEJ192222:0:Tyes000-
CJEJ195099:0:Tno000-
CJEJ354242:2:Tyes000-
CJEJ360109:0:Tyes000-
CJEJ407148:0:Tno000-
CSP501479:3:Fyes1110
CSP78:2:Tyes5550
CVIO243365:0:Tyes-00-
ECAR218491:0:Tyes0001
ECOL199310:0:Tno015255958
ECOL316407:0:Tno011884544
ECOL331111:6:Tno012414746
ECOL362663:0:Tno013425655
ECOL364106:1:Tno013606261
ECOL405955:2:Tyes012635756
ECOL409438:6:Tyes012534544
ECOL413997:0:Tno012164544
ECOL439855:4:Tno013295756
ECOL469008:0:Tno48312901
ECOL481805:0:Tno44317201
ECOL585034:0:Tno012434544
ECOL585035:0:Tno013465958
ECOL585055:0:Tno013104645
ECOL585056:2:Tno012424948
ECOL585057:0:Tno011674948
ECOL585397:0:Tno0616160
ECOL83334:0:Tno013355352
ECOLI:0:Tno012154544
ECOO157:0:Tno013025251
EFER585054:1:Tyes012794948
ESP42895:1:Tyes0565655
GOXY290633:5:Tyes000-
HACI382638:1:Tyes000-
HCHE349521:0:Tyes1110
HHEP235279:0:Tyes000-
HINF281310:0:Tyes000-
HINF374930:0:Tyes000-
HINF71421:0:Tno000-
HPY:0:Tno000-
HPYL357544:1:Tyes000-
HPYL85963:0:Tno000-
KPNE272620:2:Tyes0313130
KRAD266940:2:Fyes000-
MABS561007:1:Tyes000-
MEXT419610:0:Tyes000-
MSP400668:0:Tyes000-
MSP409:2:Tyes000-
MSUC221988:0:Tyes000-
NARO279238:0:Tyes000-
NFAR247156:2:Tyes000-
PATL342610:0:Tyes0001
PENT384676:0:Tyes000-
PFLU205922:0:Tyes000-
PFLU216595:0:Tyes1110
PFLU220664:0:Tyes000-
PHAL326442:1:Tyes000-
PING357804:0:Tyes000-
PLUM243265:0:Fyes357110
PPRO298386:1:Tyes00011
PSYR205918:0:Tyes1110
PSYR223283:2:Tyes000-
REUT381666:2:Tyes000-
RLEG216596:5:Tyes1110
RPAL316058:0:Tyes000-
RRUB269796:1:Tyes000-
RSAL288705:0:Tyes000-
RSPH272943:3:Tyes-110
RSPH349101:1:Tno-110
RSPH349102:4:Tyes-001
SAVE227882:1:Fyes000-
SBOY300268:1:Tyes013242120
SDYS300267:1:Tyes01211111112
SENT209261:0:Tno013114645
SENT220341:0:Tno013194645
SENT295319:0:Tno011374847
SENT321314:2:Tno0525251
SENT454169:2:Tno013425352
SERY405948:0:Tyes000-
SFLE198214:0:Tyes012884342
SFLE373384:0:Tno0393938
SGLO343509:3:Tyes0001
SHIGELLA:0:Tno012614544
SPRO399741:1:Tyes1110
SSON300269:1:Tyes011604241
SSP1148:0:Tyes-00-
SSP387093:0:Tyes000-
SSP94122:1:Tyes0---
STYP99287:1:Tyes012264948
TDEN326298:0:Tyes000-
TERY203124:0:Tyes000-
TTUR377629:0:Tyes0001
VPAR223926:1:Tyes1110
VVUL196600:2:Tyes0001
VVUL216895:1:Tno1110
WSUC273121:0:Tyes000-
XAXO190486:0:Tyes0001
XCAM190485:0:Tyes0001
XCAM314565:0:Tno1110
XCAM316273:0:Tno0001
XCAM487884:0:Tno1110
XORY291331:0:Tno1110
XORY342109:0:Tyes1110
XORY360094:0:Tno0002
YENT393305:1:Tyes1110
YPES187410:5:Tno1110
YPES214092:3:Tno0001
YPES349746:2:Tno1110
YPES360102:3:Tyes1110
YPES377628:2:Tno0001
YPES386656:2:Tno0001
YPSE273123:2:Tno1110
YPSE349747:2:Tno0001



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