CANDIDATE ID: 889

CANDIDATE ID: 889

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9921650e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7682 (degQ) (b3234)
   Products of gene:
     - G7682-MONOMER (serine endoprotease, periplasmic)
       Reactions:
        a polypeptide[periplasmic space]  =  2 a polypeptide[periplasmic space]

- G6379 (ybgI) (b0710)
   Products of gene:
     - G6379-MONOMER (conserved metal-binding protein)
     - CPLX0-1863 (conserved metal-binding protein)

- EG11652 (degS) (b3235)
   Products of gene:
     - EG11652-MONOMER (DegS serine endoprotease)

- EG10977 (sspA) (b3229)
   Products of gene:
     - EG10977-MONOMER (stringent starvation protein A)



Back to top


ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 197
Effective number of orgs (counting one per cluster within 468 clusters): 132

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula13
XFAS160492 ncbi Xylella fastidiosa 9a5c3
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
XAUT78245 ncbi Xanthobacter autotrophicus Py23
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79013
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252593
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP94122 ncbi Shewanella sp. ANA-34
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-403
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SACI56780 ncbi Syntrophus aciditrophicus SB3
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL316055 ncbi Rhodopseudomonas palustris BisA533
RPAL258594 ncbi Rhodopseudomonas palustris CGA0093
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38413
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.3
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-13
PSP296591 ncbi Polaromonas sp. JS6664
PSP117 Pirellula sp.3
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW253
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K53
PCAR338963 ncbi Pelobacter carbinolicus DSM 23803
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-43
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OCAR504832 ncbi Oligotropha carboxidovorans OM53
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2553
NOCE323261 ncbi Nitrosococcus oceani ATCC 197073
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN122586 ncbi Neisseria meningitidis MC583
NHAM323097 ncbi Nitrobacter hamburgensis X143
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP400668 ncbi Marinomonas sp. MWYL14
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS103
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MLOT266835 ncbi Mesorhizobium loti MAFF3030993
MFLA265072 ncbi Methylobacillus flagellatus KT4
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT83
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-003
LCHO395495 ncbi Leptothrix cholodnii SP-64
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HNEP81032 Hyphomonas neptunium3
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GSUL243231 ncbi Geobacter sulfurreducens PCA3
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DPSY177439 ncbi Desulfotalea psychrophila LSv543
DNOD246195 ncbi Dichelobacter nodosus VCS1703A3
DARO159087 ncbi Dechloromonas aromatica RCB4
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE253
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)3
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BMEL359391 ncbi Brucella melitensis biovar Abortus 23083
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BCIC186490 Candidatus Baumannia cicadellinicola3
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9413
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AHYD196024 Aeromonas hydrophila dhakensis4
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4


Names of the homologs of the genes in the group in each of these orgs
  G7682   G6379   EG11652   EG10977   
YPSE349747 YPSIP31758_0456YPSIP31758_1114YPSIP31758_0455YPSIP31758_0462
YPSE273123 YPTB3511YPTB2911YPTB3512YPTB3506
YPES386656 YPDSF_0331YPDSF_1574YPDSF_0329YPDSF_0336
YPES377628 YPN_3448YPN_1185YPN_3450YPN_3443
YPES360102 YPA_3737YPA_2428YPA_3735YPA_3742
YPES349746 YPANGOLA_A1137YPANGOLA_A3588YPANGOLA_A1139YPANGOLA_A1132
YPES214092 YPO3566YPO2697YPO3568YPO3561
YPES187410 Y0137Y1272Y0139Y0132
YENT393305 YE3744YE2955YE3745YE3739
XORY360094 XOOORF_0060XOOORF_0060XOOORF_1948
XORY342109 XOO0115XOO0115XOO2599
XORY291331 XOO0059XOO0059XOO2759
XFAS405440 XFASM12_0250XFASM12_0250XFASM12_1942
XFAS183190 PD_0231PD_0231PD_1774
XFAS160492 XF0285XF0285XF0911
XCAM487884 XCC-B100_4087XCC-B100_4087XCC-B100_1851
XCAM316273 XCAORF_0378XCAORF_0378XCAORF_2594
XCAM314565 XC_3986XC_3986XC_1795
XCAM190485 XCC3898XCC3898XCC2321
XAXO190486 XAC3980XAC3980XAC2454
XAUT78245 XAUT_3516XAUT_3516XAUT_3331
VVUL216895 VV1_0603VV1_0163VV1_0604VV1_0594
VVUL196600 VV0591VV1026VV0590VV0599
VPAR223926 VP0433VP0841VP0432VP0444
VFIS312309 VF2225VF0817VF2226VF2216
VEIS391735 VEIS_1784VEIS_1785VEIS_1784VEIS_3932
VCHO345073 VC0395_A0100VC0395_A1679VC0395_A0099VC0395_A0108
VCHO VC0566VC2093VC0565VC0576
TTUR377629 TERTU_4641TERTU_3683TERTU_3676
TDEN292415 TBD_1834TBD_1834TBD_1830
STYP99287 STM3348STM0711STM3349STM3342
SSP94122 SHEWANA3_0690SHEWANA3_1758SHEWANA3_0689SHEWANA3_0604
SSON300269 SSO_3375SSO_0661SSO_3376SSO_3370
SSED425104 SSED_0744SSED_1892SSED_0743SSED_0804
SPRO399741 SPRO_4352SPRO_1254SPRO_4353SPRO_4347
SPEA398579 SPEA_3598SPEA_1914SPEA_3599SPEA_3533
SONE211586 SO_3942SO_2621SO_3943SO_0611
SLOI323850 SHEW_3296SHEW_1572SHEW_3297SHEW_0573
SHIGELLA HTRAYBGIDEGSSSPA
SHAL458817 SHAL_3686SHAL_2382SHAL_3687SHAL_3627
SGLO343509 SG0213SG0869SG0212SG0218
SFLE373384 SFV_3261SFV_0625SFV_3262SFV_3256
SFLE198214 AAN44738.1AAN42229.1AAN44739.1AAN44733.1
SENT454169 SEHA_C3646SEHA_C0834SEHA_C3647SEHA_C3640
SENT321314 SCH_3286SCH_0730SCH_3287SCH_3280
SENT295319 SPA3215SPA2030SPA3216SPA3210
SENT220341 STY3528STY0751STY3529STY3523
SENT209261 T3264T2165T3265T3259
SDYS300267 SDY_3410SDY_0645SDY_3411SDY_3405
SDEN318161 SDEN_0504SDEN_2073SDEN_0503SDEN_3198
SDEG203122 SDE_3731SDE_3167SDE_3160
SBOY300268 SBO_3155SBO_0569SBO_3154SBO_3160
SBAL402882 SHEW185_0700SHEW185_2460SHEW185_0699SHEW185_3760
SBAL399599 SBAL195_0730SBAL195_2580SBAL195_0729SBAL195_3886
SACI56780 SYN_01706SYN_01923SYN_00527
RSOL267608 RSC2932RSC2931RSC2932RSC2926
RRUB269796 RRU_A0024RRU_A2662RRU_A3193
RPAL316058 RPB_2323RPB_2323RPB_0908
RPAL316056 RPC_3417RPC_3417RPC_3336
RPAL316055 RPE_3557RPE_3557RPE_3417
RPAL258594 RPA3221RPA3221RPA3159
RMET266264 RMET_3233RMET_3232RMET_3233RMET_3227
RLEG216596 RL1877RL1806RL2759
RFER338969 RFER_2959RFER_2961RFER_2959RFER_2967
REUT381666 H16_A3401H16_A3400H16_A3401H16_A3395
REUT264198 REUT_A3096REUT_A3095REUT_A3096REUT_A3090
PSYR223283 PSPTO_4435PSPTO_4434PSPTO_4435PSPTO_4424
PSYR205918 PSYR_4130PSYR_4129PSYR_4130PSYR_4118
PSTU379731 PST_1227PST_1049PST_1048PST_1066
PSP56811 PSYCPRWF_1581PSYCPRWF_1580PSYCPRWF_0793
PSP312153 PNUC_0123PNUC_0123PNUC_0128
PSP296591 BPRO_0817BPRO_0818BPRO_0817BPRO_0824
PSP117 RB1359RB11693RB1359
PPUT76869 PPUTGB1_4377PPUTGB1_4547PPUTGB1_4548PPUTGB1_4529
PPUT351746 PPUT_4291PPUT_4423PPUT_4424PPUT_4404
PPUT160488 PP_1430PP_1302PP_1301PP_1320
PPRO298386 PBPRA3240PBPRA1042PBPRA3241PBPRA3232
PNAP365044 PNAP_0709PNAP_0710PNAP_0709PNAP_0716
PMUL272843 PM0734PM0183PM0748PM0522
PMEN399739 PMEN_1471PMEN_0889PMEN_0888PMEN_0906
PLUM243265 PLU4018PLU1424PLU4022PLU4013
PING357804 PING_1037PING_2230PING_2880PING_2871
PHAL326442 PSHAA2536PSHAA1173PSHAA2537PSHAA2527
PFLU220664 PFL_1451PFL_0934PFL_0933PFL_5077
PFLU216595 PFLU0759PFLU0758PFLU0844
PFLU205922 PFL_1365PFL_0876PFL_0875PFL_4689
PENT384676 PSEEN4293PSEEN4520PSEEN4521PSEEN4502
PCRY335284 PCRYO_1114PCRYO_1115PCRYO_1586
PCAR338963 PCAR_2948PCAR_2677PCAR_2948
PATL342610 PATL_0553PATL_2178PATL_0554PATL_3698
PARC259536 PSYC_1271PSYC_1270PSYC_1423
PAER208964 PA0766PA4445PA4446PA4428
PAER208963 PA14_54390PA14_57740PA14_57760PA14_57530
OCAR504832 OCAR_5281OCAR_5708OCAR_5755
OANT439375 OANT_2667OANT_1982OANT_2385
NWIN323098 NWI_2934NWI_1391NWI_1706
NOCE323261 NOC_2139NOC_2139NOC_0296
NMUL323848 NMUL_A0510NMUL_A0806NMUL_A0510NMUL_A1002
NMEN122586 NMB_0532NMB_2054NMB_1953
NHAM323097 NHAM_1572NHAM_1572NHAM_2428
NEUT335283 NEUT_1685NEUT_1686NEUT_1685NEUT_1113
NEUR228410 NE1508NE1509NE1508NE0812
MSUC221988 MS0993MS1464MS1373MS1281
MSP400668 MMWYL1_1102MMWYL1_2403MMWYL1_2404MMWYL1_2398
MPET420662 MPE_A0844MPE_A0845MPE_A0844MPE_A0852
MMAR394221 MMAR10_0942MMAR10_1769MMAR10_0117
MMAG342108 AMB3492AMB3481AMB3942
MLOT266835 MLR7692MLR0328MLL0063
MFLA265072 MFLA_0261MFLA_0262MFLA_0261MFLA_0263
MCAP243233 MCA_2343MCA_1131MCA_2343MCA_1959
MAQU351348 MAQU_2259MAQU_2699MAQU_2467
LPNE400673 LPC_0747LPC_2447LPC_0747LPC_0433
LPNE297246 LPP1285LPP0910LPP1285LPP2757
LPNE297245 LPL1284LPL0879LPL1284LPL2630
LPNE272624 LPG1331LPG0848LPG1331LPG2702
LINT363253 LI0346LI0449LI0346
LCHO395495 LCHO_1605LCHO_1604LCHO_1605LCHO_0933
KPNE272620 GKPORF_B2968GKPORF_B5149GKPORF_B2969GKPORF_B2963
JSP375286 MMA_3275MMA_3274MMA_3275MMA_3268
ILOI283942 IL0411IL1377IL0410IL0419
HSOM228400 HSM_1285HSM_1003HSM_1533HSM_1221
HSOM205914 HS_0816HS_0663HS_1049HS_0754
HNEP81032 HNE_1313HNE_2644HNE_2391
HINF71421 HI_1259HI_0105HI_0945HI_1441
HINF374930 CGSHIEE_04045CGSHIEE_02770CGSHIEE_07240CGSHIEE_04805
HINF281310 NTHI1905NTHI0186NTHI1116NTHI1689
HHAL349124 HHAL_2110HHAL_2109HHAL_2110HHAL_2106
HDUC233412 HD_0260HD_1471HD_1350HD_1425
HCHE349521 HCH_01114HCH_05302HCH_05303HCH_05897
HARS204773 HEAR3056HEAR3055HEAR3056HEAR3049
GSUL243231 GSU_0080GSU_3085GSU_0080
ESP42895 ENT638_3669ENT638_1213ENT638_3670ENT638_3664
EFER585054 EFER_3205EFER_2407EFER_3206EFER_3199
ECOO157 DEGQYBGIDEGSSSPA
ECOL83334 ECS4107ECS0735ECS4108ECS4102
ECOL585397 ECED1_3884ECED1_0682ECED1_3885ECED1_3879
ECOL585057 ECIAI39_3724ECIAI39_0662ECIAI39_3725ECIAI39_3718
ECOL585056 ECUMN_3708ECUMN_0788ECUMN_3709ECUMN_3703
ECOL585055 EC55989_3647EC55989_0693EC55989_3648EC55989_3642
ECOL585035 ECS88_3610ECS88_0738ECS88_3611ECS88_3605
ECOL585034 ECIAI1_3376ECIAI1_0684ECIAI1_3377ECIAI1_3371
ECOL481805 ECOLC_0472ECOLC_2945ECOLC_0471ECOLC_0477
ECOL469008 ECBD_0513ECBD_2951ECBD_0512ECBD_0518
ECOL439855 ECSMS35_3530ECSMS35_0725ECSMS35_3531ECSMS35_3524
ECOL413997 ECB_03094ECB_00670ECB_03095ECB_03089
ECOL409438 ECSE_3513ECSE_0769ECSE_3514ECSE_3508
ECOL405955 APECO1_3210APECO1_1365APECO1_3209APECO1_3215
ECOL364106 UTI89_C3665UTI89_C0708UTI89_C3666UTI89_C3658
ECOL362663 ECP_3317ECP_0723ECP_3318ECP_3311
ECOL331111 ECE24377A_3717ECE24377A_0735ECE24377A_3718ECE24377A_3712
ECOL316407 ECK3223:JW3203:B3234ECK0699:JW0700:B0710ECK3224:JW3204:B3235ECK3218:JW3198:B3229
ECOL199310 C3989C0789C3990C3982
ECAR218491 ECA0303ECA1350ECA0302ECA0308
DPSY177439 DP0755DP0634DP0755
DNOD246195 DNO_0902DNO_0852DNO_0851
DARO159087 DARO_3371DARO_3370DARO_3371DARO_0812
CSAL290398 CSAL_2211CSAL_2210CSAL_2211CSAL_2205
CPSY167879 CPS_4346CPS_2001CPS_4347CPS_4437
CPRO264201 PC1291PC1173PC1291
BVIE269482 BCEP1808_0418BCEP1808_0419BCEP1808_0418BCEP1808_0423
BTHA271848 BTH_I2979BTH_I2978BTH_I2979BTH_I2974
BSUI470137 BSUIS_A0641BSUIS_A1255BSUIS_A0878
BSUI204722 BR_0611BR_1207BR_0839
BSP376 BRADO2695BRADO4635BRADO3534
BSP36773 BCEP18194_A3537BCEP18194_A3538BCEP18194_A3537BCEP18194_A3542
BSP107806 BU228BU301BU228
BPSE320373 BURPS668_3652BURPS668_3651BURPS668_3652BURPS668_3647
BPSE320372 BURPS1710B_A3977BURPS1710B_A3976BURPS1710B_A3977BURPS1710B_A3972
BPSE272560 BPSL3125BPSL3124BPSL3125BPSL3120
BPET94624 BPET0125BPET0124BPET0125BPET0119
BPER257313 BP2434BP0279BP0280BP0274
BPAR257311 BPP3298BPP4281BPP4280BPP4286
BMEL359391 BAB1_0635BAB1_1229BAB1_0859
BMEL224914 BMEI1330BMEI0783BMEI1125
BMAL320389 BMA10247_2750BMA10247_2749BMA10247_2750BMA10247_2745
BMAL320388 BMASAVP1_A3254BMASAVP1_A3255BMASAVP1_A3254BMASAVP1_A3259
BMAL243160 BMA_2700BMA_2699BMA_2700BMA_2695
BJAP224911 BLR5235BLR5235BLR4332
BCIC186490 BCI_0029BCI_0096BCI_0029
BCEN331272 BCEN2424_0439BCEN2424_0440BCEN2424_0439BCEN2424_0444
BCEN331271 BCEN_2668BCEN_2667BCEN_2668BCEN_2663
BCAN483179 BCAN_A0627BCAN_A1229BCAN_A0854
BBRO257310 BB3749BB4868BB4867BB4873
BAMB398577 BAMMC406_0366BAMMC406_0367BAMMC406_0366BAMMC406_0371
BAMB339670 BAMB_0357BAMB_0358BAMB_0357BAMB_0362
BABO262698 BRUAB1_0630BRUAB1_1212BRUAB1_0852
ASP76114 EBA2969EBA1284EBA1283EBA1195
ASP62977 ACIAD2586ACIAD1347ACIAD1348ACIAD3014
ASP62928 AZO3337AZO3336AZO3337AZO0963
ASP232721 AJS_0784AJS_0786AJS_0784AJS_0792
ASAL382245 ASA_0330ASA_1508ASA_0329ASA_0338
APLE434271 APJL_1306APJL_0620APJL_0744APJL_0648
APLE416269 APL_1293APL_0625APL_0742APL_0658
AHYD196024 AHA_3908AHA_2823AHA_3909AHA_3900
AEHR187272 MLG_2213MLG_2212MLG_2213MLG_2208
ABOR393595 ABO_0815ABO_0566ABO_0565ABO_0581
ABAU360910 BAV3326BAV3327BAV3326BAV3332


Organism features enriched in list (features available for 186 out of the 197 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00004931492
Disease:Brucellosis 0.003185355
Disease:Bubonic_plague 0.000997566
Disease:Dysentery 0.000997566
Disease:Gastroenteritis 0.00087601013
Endospores:No 2.496e-1231211
GC_Content_Range4:0-40 1.108e-2515213
GC_Content_Range4:40-60 6.788e-10105224
GC_Content_Range4:60-100 0.000028666145
GC_Content_Range7:0-30 1.409e-7147
GC_Content_Range7:30-40 1.412e-1614166
GC_Content_Range7:50-60 1.049e-1063107
GC_Content_Range7:60-70 8.169e-766134
Genome_Size_Range5:0-2 2.635e-217155
Genome_Size_Range5:2-4 0.000830647197
Genome_Size_Range5:4-6 4.776e-19106184
Genome_Size_Range5:6-10 0.00031042647
Genome_Size_Range9:0-1 0.0003151127
Genome_Size_Range9:1-2 7.268e-176128
Genome_Size_Range9:2-3 5.439e-619120
Genome_Size_Range9:4-5 3.592e-65096
Genome_Size_Range9:5-6 2.001e-115688
Genome_Size_Range9:6-8 0.00003182438
Gram_Stain:Gram_Neg 1.547e-36172333
Habitat:Specialized 0.0021650853
Motility:No 2.833e-1216151
Motility:Yes 2.847e-10120267
Optimal_temp.:25-30 0.00015311419
Optimal_temp.:35-37 0.00087601013
Oxygen_Req:Anaerobic 1.898e-99102
Oxygen_Req:Facultative 1.790e-894201
Pathogenic_in:Animal 0.00532023066
Pathogenic_in:No 0.001589557226
Pathogenic_in:Plant 0.00089391115
Shape:Coccobacillus 0.0052392811
Shape:Coccus 1.290e-8682
Shape:Rod 7.911e-17155347
Shape:Sphere 0.0054658119
Shape:Spiral 0.0010285334
Temp._range:Mesophilic 0.0004226165473
Temp._range:Psychrophilic 0.000029999
Temp._range:Thermophilic 0.0000157135



Back to top


ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 351
Effective number of orgs (counting one per cluster within 468 clusters): 277

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX1
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE292459 ncbi Symbiobacterium thermophilum IAM 148631
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10401
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis1
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.11
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT31
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP290400 ncbi Jannaschia sp. CCS11
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FTUL418136 ncbi Francisella tularensis tularensis WY96-34181
FTUL393115 ncbi Francisella tularensis tularensis FSC1981
FTUL393011 ncbi Francisella tularensis holarctica OSU181
FTUL351581 Francisella tularensis holarctica FSC2001
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S41
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
DRAD243230 ncbi Deinococcus radiodurans R11
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE451
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CDIF272563 ncbi Clostridium difficile 6301
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
BXEN266265 ncbi Burkholderia xenovorans LB4001
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1351
BTRI382640 ncbi Bartonella tribocorum CIP 1054761
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BSUB ncbi Bacillus subtilis subtilis 1680
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BHER314723 ncbi Borrelia hermsii DAH1
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi1
BCLA66692 ncbi Bacillus clausii KSM-K161
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W1
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L1
BCER226900 ncbi Bacillus cereus ATCC 145791
BBUR224326 ncbi Borrelia burgdorferi B311
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor1
BANT260799 ncbi Bacillus anthracis Sterne1
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
ANAE240017 Actinomyces oris MG11
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232701
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7682   G6379   EG11652   EG10977   
ZMOB264203
WSUC273121 WS2226
WPIP955
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX1843
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA1606
TTHE262724 TT_C1242
TTEN273068 TTE1753
TSP28240
TSP1755 TETH514_1317
TROS309801 TRD_1177
TPSE340099 TETH39_0741
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014 TK1572
TFUS269800 TFU_1955
TERY203124
TELO197221
TDEN243275 TDE_2208
TACI273075
SWOL335541 SWOL_0646
STRO369723
STOK273063
STHE322159 STER_1227
STHE299768 STR1248
STHE292459 STH598
STHE264199 STU1248
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP321332
SSP321327
SSP292414 TM1040_1953
SSP1148 SLL0067
SSP1131
SSOL273057
SSAP342451 SSP1197
SRUB309807 SRU_2112
SPYO370554 MGAS10750_SPY0826
SPYO370553
SPYO370552 MGAS10270_SPY0791
SPYO370551 MGAS9429_SPY0790
SPYO319701 M28_SPY0712
SPYO293653 M5005_SPY0732
SPYO286636 M6_SPY0758
SPYO198466 SPYM3_0644
SPYO193567 SPS1208
SPYO186103 SPYM18_0988
SPYO160490 SPY0931
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SLAC55218 SL1157_3142
SHAE279808 SH1357
SGOR29390 SGO_1006
SERY405948 SACE_1582
SEPI176280 SE_1246
SEPI176279 SERP1125
SELO269084
SCO SCO2301
SAVE227882 SAV5875
SAUR93062 SACOL1616
SAUR93061 SAOUHSC_01660
SAUR426430 NWMN_1462
SAUR418127 SAHV_1546
SAUR367830 SAUSA300_1519
SAUR359787 SAURJH1_1651
SAUR359786 SAURJH9_1617
SAUR282459 SAS1497
SAUR282458 SAR1636
SAUR273036 SAB1431C
SAUR196620 MW1511
SAUR158879 SA1388
SAUR158878 SAV1559
SARE391037
SALA317655
SAGA211110 GBS1275
SAGA208435 SAG_1202
SAGA205921 SAK_1289
SACI330779
RXYL266117 RXYL_2593
RTYP257363
RSPH272943 RSP_3242
RSP357808
RSP101510 RHA1_RO01183
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RPAL316057 RPD_3156
RMAS416276
RFEL315456
RDEN375451 RD1_3652
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_0914
PRUM264731
PPEN278197
PMOB403833 PMOB_0031
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PISL384616
PHOR70601 PH0627
PGIN242619 PG_0593
PFUR186497 PF1065
PDIS435591
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844 PAB1433
OTSU357244
OIHE221109 OB1940
NSP387092 NIS_1713
NSP35761
NSEN222891
NPHA348780 NP4756A
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2718
MMAR444158
MMAR426368
MMAR402880
MMAR368407 MEMAR_1515
MMAR267377
MLEP272631
MLAB410358 MLAB_0272
MKAN190192
MJAN243232 MJ_0927
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0037
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_0258
MBOV410289
MBOV233413
MBAR269797 MBAR_A0014
MAVI243243
MART243272
MAER449447 MAE_15850
MAEO419665 MAEO_0753
MACE188937 MA2828
MABS561007
LXYL281090
LWEL386043
LSPH444177 BSPH_3697
LSAK314315 LSA0887
LREU557436
LPLA220668 LP_1905
LMON265669 LMOF2365_1471
LMON169963 LMO1452
LMES203120
LLAC272623
LLAC272622
LJOH257314 LJ_1304
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831 LGAS_1110
LDEL390333 LDB1218
LDEL321956 LBUL_1127
LCAS321967
LBRE387344 LVIS_0760
LBOR355277 LBJ_0760
LBOR355276 LBL_2318
LBIF456481 LEPBI_I1481
LBIF355278 LBF_1428
LACI272621
KRAD266940
JSP290400 JANN_1437
IHOS453591
HWAL362976 HQ2853A
HSP64091 VNG1766C
HSAL478009 OE3482R
HMUK485914 HMUK_1695
HMAR272569 RRNAC1923
HBUT415426
HAUR316274 HAUR_2571
GVIO251221 GLL1892
GTHE420246 GTNG_2415
GKAU235909 GK2478
GFOR411154 GFO_0623
GBET391165 GBCGDNIH1_1490
FTUL418136 FTW_1612
FTUL393115 FTF0458
FTUL393011 FTH_1552
FTUL351581 FTL_1606
FSUC59374 FSU0039
FSP1855
FSP106370
FRANT SSPA
FNUC190304 FN1316
FNOD381764
FMAG334413
FJOH376686 FJOH_0019
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DSP255470
DSP216389
DSHI398580 DSHI_3911
DRAD243230 DR_0110
DHAF138119 DSY4253
DGEO319795 DGEO_1982
DETH243164
DDES207559 DDE_1729
CTET212717 CTC_02007
CSUL444179
CSP501479 CSE45_4444
CPHY357809
CPER289380 CPR_1972
CPER195103 CPF_2261
CPER195102 CPE2004
CPEL335992
CNOV386415
CMIC443906
CMIC31964 CMS1612
CMET456442 MBOO_1271
CMAQ397948
CKOR374847
CKLU431943 CKL_0945
CJEJ407148 C8J_1171
CJEJ360109 JJD26997_0497
CJEJ354242 CJJ81176_1242
CJEJ195099 CJE_1363
CJEJ192222 CJ1228C
CJEI306537
CHUT269798
CHOM360107
CGLU196627 CG2457
CFET360106
CEFF196164 CE2135
CDIP257309 DIP1680
CDIF272563 CD1457
CDES477974
CCUR360105 CCV52592_0285
CCON360104 CCC13826_1438
CCHL340177 CAG_0494
CBOT536232 CLM_3329
CBOT515621 CLJ_B3191
CBOT508765 CLL_A0916
CBOT498213 CLD_1611
CBOT441772 CLI_2987
CBOT441771 CLC_2830
CBOT441770 CLB_2898
CBOT36826 CBO2935
CBEI290402 CBEI_0855
CACE272562 CAC1303
BXEN266265 BXE_C1190
BWEI315730 BCERKBAB4_3112
BTUR314724 BT0468
BTRI382640 BT_0704
BTHU412694 BALH_3882
BTHU281309 BT9727_4029
BSUB
BPUM315750
BLON206672
BLIC279010 BL03697
BHER314723 BH0468
BHAL272558 BH1380
BGAR290434 BG0481
BCLA66692 ABC1693
BCER572264 BCA_4400
BCER405917 BCE_4369
BCER315749
BCER288681 BCE33L4039
BCER226900 BC_3416
BBUR224326 BB_0468
BBAC264462 BD3237
BAPH372461 BCC_183
BANT592021 BAA_4533
BANT568206 BAMEG_4551
BANT261594 GBAA4512
BANT260799 BAS4191
BAMY326423
BAFZ390236 BAPKO_0497
AYEL322098
AURANTIMONAS
ASP1667
APHA212042
APER272557
AORE350688 CLOS_1282
ANAE240017 ANA_0922
AMET293826 AMET_0528
AMAR234826
ALAI441768
AFUL224325 AF_1777
AFER243159 AFE_2807
ADEH290397 ADEH_1771
ACRY349163 ACRY_1317
ACEL351607
ABAC204669 ACID345_3298
AAUR290340
AAEO224324


Organism features enriched in list (features available for 329 out of the 351 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.120e-77492
Arrangment:Clusters 0.00004961717
Disease:Food_poisoning 0.005530499
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00171651111
Disease:Wide_range_of_infections 0.00171651111
Endospores:No 2.415e-18168211
Endospores:Yes 1.631e-105053
GC_Content_Range4:0-40 2.523e-24177213
GC_Content_Range4:40-60 2.377e-1188224
GC_Content_Range4:60-100 0.000108863145
GC_Content_Range7:0-30 3.703e-74247
GC_Content_Range7:30-40 2.352e-15135166
GC_Content_Range7:40-50 0.009466656117
GC_Content_Range7:50-60 6.310e-1032107
GC_Content_Range7:60-70 1.453e-652134
GC_Content_Range7:70-100 0.00171651111
Genome_Size_Range5:0-2 1.421e-11122155
Genome_Size_Range5:2-4 0.0001460131197
Genome_Size_Range5:4-6 1.395e-1363184
Genome_Size_Range5:6-10 0.00002341347
Genome_Size_Range9:1-2 4.134e-10102128
Genome_Size_Range9:2-3 0.000024087120
Genome_Size_Range9:4-5 0.00005473796
Genome_Size_Range9:5-6 2.328e-82688
Genome_Size_Range9:6-8 3.983e-6838
Gram_Stain:Gram_Neg 2.946e-51103333
Gram_Stain:Gram_Pos 3.327e-42148150
Habitat:Specialized 0.00005394353
Motility:No 2.405e-18129151
Motility:Yes 1.179e-7120267
Optimal_temp.:25-30 0.0000310219
Optimal_temp.:30-37 0.00002741818
Oxygen_Req:Anaerobic 7.764e-779102
Oxygen_Req:Facultative 0.002854399201
Pathogenic_in:Animal 0.00137082666
Pathogenic_in:No 0.0099377139226
Salinity:Non-halophilic 0.004522071106
Shape:Coccus 1.734e-97082
Shape:Irregular_coccus 0.00004961717
Shape:Rod 6.809e-15151347
Shape:Sphere 0.00777871619
Temp._range:Hyperthermophilic 0.00002592223
Temp._range:Mesophilic 0.0001070250473
Temp._range:Thermophilic 3.570e-63235



Back to top


ORGANISMS ENRICHED FOR GROUP:




Back to top


ORGANISMS DEPLETED FOR GROUP:




Back to top


PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181620.6736
GLYCOCAT-PWY (glycogen degradation I)2461700.6512
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001880.6434
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951480.6427
PWY-5918 (heme biosynthesis I)2721730.6055
PWY-1269 (CMP-KDO biosynthesis I)3251900.6028
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251540.5954
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901770.5903
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911770.5880
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861750.5858
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961780.5834
AST-PWY (arginine degradation II (AST pathway))1201040.5782
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491180.5736
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481920.5698
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761290.5624
PWY-5148 (acyl-CoA hydrolysis)2271490.5539
PWY-4041 (γ-glutamyl cycle)2791660.5399
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391850.5393
PWY-5913 (TCA cycle variation IV)3011730.5376
TYRFUMCAT-PWY (tyrosine degradation I)1841290.5359
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911310.5286
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831250.5088
PWY-5386 (methylglyoxal degradation I)3051690.5010
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911260.4912
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291740.4838
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81720.4761
PWY-5028 (histidine degradation II)130960.4663
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94780.4656
GALACTITOLCAT-PWY (galactitol degradation)73660.4606
PWY-46 (putrescine biosynthesis III)138990.4602
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96780.4555
REDCITCYC (TCA cycle variation II)1741140.4538
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561060.4515
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135960.4467
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491420.4458
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491420.4458
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551440.4448
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138970.4436
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001590.4431
PWY-5669 (phosphatidylethanolamine biosynthesis I)4161920.4431
P344-PWY (acrylonitrile degradation)2101270.4425
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4221930.4398
GLUCONSUPER-PWY (D-gluconate degradation)2291330.4338
P601-PWY (D-camphor degradation)95750.4317
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112830.4278
PWY-3162 (tryptophan degradation V (side chain pathway))94740.4270
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981850.4251
PWY-561 (superpathway of glyoxylate cycle)1621050.4232
DAPLYSINESYN-PWY (lysine biosynthesis I)3421690.4222
PWY-6087 (4-chlorocatechol degradation)2231290.4211
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261640.4210
PWY0-981 (taurine degradation IV)106790.4178
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651750.4176
GLUCARDEG-PWY (D-glucarate degradation I)1521000.4174
GLYOXYLATE-BYPASS (glyoxylate cycle)1691070.4158



Back to top


PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6379   EG11652   EG10977   
G76820.9988920.9998160.999215
G63790.9993920.998588
EG116520.999396
EG10977



Back to top


PAIRWISE BLAST SCORES:

  G7682   G6379   EG11652   EG10977   
G76820.0f0---
G6379-0.0f0--
EG116525.7e-48-0.0f0-
EG10977---0.0f0



Back to top


PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



Back to top


GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11652 G7682 (centered at EG11652)
EG10977 (centered at EG10977)
G6379 (centered at G6379)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7682   G6379   EG11652   EG10977   
264/623330/623234/623235/623
AAVE397945:0:Tyes-0-2585
ABAC204669:0:Tyes--0-
ABAU360910:0:Tyes0106
ABOR393595:0:Tyes2531016
ABUT367737:0:Tyes0-0-
ACAU438753:0:Tyes0-1408-
ACRY349163:8:Tyes0---
ADEH290397:0:Tyes0---
AEHR187272:0:Tyes5450
AFER243159:0:Tyes---0
AFUL224325:0:Tyes-0--
AHYD196024:0:Tyes1020010211012
AMAR329726:9:Tyes--01259
AMET293826:0:Tyes-0--
ANAE240017:0:Tyes-0--
AORE350688:0:Tyes-0--
APLE416269:0:Tyes673011632
APLE434271:0:Tno692011828
ASAL382245:5:Tyes1113409
ASP232721:2:Tyes0208
ASP62928:0:Tyes2416241524160
ASP62977:0:Tyes1145011529
ASP76114:2:Tyes104854550
AVAR240292:3:Tyes-0-137
BABO262698:1:Tno0-559219
BAFZ390236:2:Fyes-0--
BAMB339670:3:Tno0105
BAMB398577:3:Tno0105
BANT260799:0:Tno-0--
BANT261594:2:Tno-0--
BANT568206:2:Tyes-0--
BANT592021:2:Tno-0--
BAPH198804:0:Tyes069--
BAPH372461:0:Tyes-0--
BBAC264462:0:Tyes---0
BBAC360095:0:Tyes0-271-
BBRO257310:0:Tyes0113411331139
BBUR224326:21:Fno-0--
BCAN483179:1:Tno0-590223
BCEN331271:2:Tno5450
BCEN331272:3:Tyes0105
BCER226900:1:Tyes-0--
BCER288681:0:Tno-0--
BCER405917:1:Tyes-0--
BCER572264:1:Tno-0--
BCIC186490:0:Tyes0620-
BCLA66692:0:Tyes-0--
BFRA272559:1:Tyes-0295-
BFRA295405:0:Tno-0371-
BGAR290434:2:Fyes-0--
BHAL272558:0:Tyes-0--
BHEN283166:0:Tyes0-512-
BHER314723:0:Fyes-0--
BJAP224911:0:Fyes915-9150
BLIC279010:0:Tyes-0--
BMAL243160:1:Tno5450
BMAL320388:1:Tno0105
BMAL320389:1:Tyes5450
BMEL224914:1:Tno561-0350
BMEL359391:1:Tno0-538210
BOVI236:1:Tyes0-513-
BPAR257311:0:Tno0961960966
BPER257313:0:Tyes1938560
BPET94624:0:Tyes6560
BPSE272560:1:Tyes5450
BPSE320372:1:Tno5450
BPSE320373:1:Tno5450
BQUI283165:0:Tyes0-359-
BSP107806:2:Tyes0710-
BSP36773:2:Tyes0105
BSP376:0:Tyes0-1859801
BSUI204722:1:Tyes0-586226
BSUI470137:1:Tno0-600232
BTHA271848:1:Tno5450
BTHE226186:0:Tyes-0444-
BTHU281309:1:Tno-0--
BTHU412694:1:Tno-0--
BTRI382640:1:Tyes0---
BTUR314724:0:Fyes-0--
BVIE269482:7:Tyes0105
BWEI315730:4:Tyes-0--
BXEN266265:0:Tyes---0
CABO218497:0:Tyes1460--
CACE272562:1:Tyes-0--
CAULO:0:Tyes281--0
CBEI290402:0:Tyes-0--
CBLO203907:0:Tyes0-0-
CBLO291272:0:Tno0-0-
CBOT36826:1:Tno-0--
CBOT441770:0:Tyes-0--
CBOT441771:0:Tno-0--
CBOT441772:1:Tno-0--
CBOT498213:1:Tno-0--
CBOT508765:1:Tyes-0--
CBOT515621:2:Tyes-0--
CBOT536232:0:Tno-0--
CBUR227377:1:Tyes0--949
CBUR360115:1:Tno0--708
CBUR434922:2:Tno492--0
CCAV227941:1:Tyes1410--
CCHL340177:0:Tyes0---
CCON360104:2:Tyes-0--
CCUR360105:0:Tyes-0--
CDIF272563:1:Tyes-0--
CDIP257309:0:Tyes-0--
CEFF196164:0:Fyes-0--
CFEL264202:1:Tyes0144--
CGLU196627:0:Tyes-0--
CHYD246194:0:Tyes-3890-
CJAP155077:0:Tyes0-205-
CJEJ192222:0:Tyes0---
CJEJ195099:0:Tno0---
CJEJ354242:2:Tyes0---
CJEJ360109:0:Tyes0---
CJEJ407148:0:Tno0---
CKLU431943:1:Tyes-0--
CMET456442:0:Tyes-0--
CMIC31964:2:Tyes-0--
CMUR243161:1:Tyes0173--
CPER195102:1:Tyes-0--
CPER195103:0:Tno-0--
CPER289380:3:Tyes-0--
CPNE115711:1:Tyes2390--
CPNE115713:0:Tno8600--
CPNE138677:0:Tno8680--
CPNE182082:0:Tno9070--
CPRO264201:0:Fyes1200120-
CPSY167879:0:Tyes2265022662355
CRUT413404:0:Tyes-883-0
CSAL290398:0:Tyes6560
CSP501479:5:Fyes---0
CSP78:2:Tyes468--0
CTEP194439:0:Tyes0-0-
CTET212717:0:Tyes-0--
CTRA471472:0:Tyes0167--
CTRA471473:0:Tno0167--
CVES412965:0:Tyes-809-0
CVIO243365:0:Tyes-4-0
DARO159087:0:Tyes2572257125720
DDES207559:0:Tyes-0--
DGEO319795:1:Tyes-0--
DHAF138119:0:Tyes--0-
DNOD246195:0:Tyes461-0
DOLE96561:0:Tyes0-0-
DPSY177439:2:Tyes1400140-
DRAD243230:3:Tyes-0--
DRED349161:0:Tyes-17000-
DSHI398580:3:Tyes0---
DVUL882:1:Tyes120--
ECAR218491:0:Tyes1105606
ECOL199310:0:Tno3136031373129
ECOL316407:0:Tno2527025282522
ECOL331111:6:Tno2865028662860
ECOL362663:0:Tno2594025952588
ECOL364106:1:Tno2953029542946
ECOL405955:2:Tyes2664026652659
ECOL409438:6:Tyes2792027932787
ECOL413997:0:Tno2438024392433
ECOL439855:4:Tno2719027202713
ECOL469008:0:Tno1243106
ECOL481805:0:Tno1248106
ECOL585034:0:Tno2666026672661
ECOL585035:0:Tno2776027772771
ECOL585055:0:Tno2923029242918
ECOL585056:2:Tno2926029272921
ECOL585057:0:Tno3076030773070
ECOL585397:0:Tno3120031213115
ECOL83334:0:Tno3448034493443
ECOLI:0:Tno2585025862580
ECOO157:0:Tno3461034623456
EFER585054:1:Tyes8090810803
ESP42895:1:Tyes2475024762470
FJOH376686:0:Tyes--0-
FNUC190304:0:Tyes-0--
FPHI484022:1:Tyes-0-252
FRANT:0:Tno---0
FSUC59374:0:Tyes-0--
FTUL351581:0:Tno---0
FTUL393011:0:Tno---0
FTUL393115:0:Tyes---0
FTUL401614:0:Tyes-524-0
FTUL418136:0:Tno---0
FTUL458234:0:Tno-0-575
GBET391165:0:Tyes0---
GFOR411154:0:Tyes0---
GKAU235909:1:Tyes-0--
GMET269799:1:Tyes2428-0-
GOXY290633:5:Tyes0-626-
GSUL243231:0:Tyes029890-
GTHE420246:1:Tyes-0--
GURA351605:0:Tyes0-0-
GVIO251221:0:Tyes---0
HACI382638:1:Tyes0-0-
HARS204773:0:Tyes7670
HAUR316274:2:Tyes-0--
HCHE349521:0:Tyes0403140324609
HDUC233412:0:Tyes010639531020
HHAL349124:0:Tyes4340
HHEP235279:0:Tyes0-0-
HINF281310:0:Tyes154408581358
HINF374930:0:Tyes2280780360
HINF71421:0:Tno112408191303
HMAR272569:8:Tyes-0--
HMOD498761:0:Tyes-10080-
HMUK485914:1:Tyes-0--
HNEP81032:0:Tyes0-13071060
HPY:0:Tno0-0-
HPYL357544:1:Tyes0-0-
HPYL85963:0:Tno0-0-
HSAL478009:4:Tyes-0--
HSOM205914:1:Tyes151038689
HSOM228400:0:Tno2790530217
HSP64091:2:Tno-0--
HWAL362976:1:Tyes-0--
ILOI283942:0:Tyes199209
JSP290400:1:Tyes---0
JSP375286:0:Tyes7670
KPNE272620:2:Tyes5212460
LBIF355278:2:Tyes---0
LBIF456481:2:Tno---0
LBOR355276:1:Tyes--0-
LBOR355277:1:Tno--0-
LBRE387344:2:Tyes-0--
LCHO395495:0:Tyes6766756760
LDEL321956:0:Tyes-0--
LDEL390333:0:Tyes-0--
LGAS324831:0:Tyes-0--
LINT363253:3:Tyes01020-
LJOH257314:0:Tyes-0--
LMON169963:0:Tno-0--
LMON265669:0:Tyes-0--
LPLA220668:0:Tyes-0--
LPNE272624:0:Tno48204821850
LPNE297245:1:Fno40104011747
LPNE297246:1:Fyes37603761851
LPNE400673:0:Tno30619723060
LSAK314315:0:Tyes-0--
LSPH444177:1:Tyes-0--
MACE188937:0:Tyes-0--
MAEO419665:0:Tyes-0--
MAER449447:0:Tyes---0
MAQU351348:2:Tyes0437-205
MBAR269797:1:Tyes-0--
MBUR259564:0:Tyes-0--
MCAP243233:0:Tyes115701157790
MEXT419610:0:Tyes0-1598-
MFLA265072:0:Tyes0102
MHUN323259:0:Tyes-0--
MJAN243232:2:Tyes-0--
MLAB410358:0:Tyes-0--
MLOT266835:2:Tyes6063-2070
MMAG342108:0:Tyes11-0461
MMAR368407:0:Tyes-0--
MMAR394221:0:Tyes822-16480
MMAZ192952:0:Tyes-0--
MPET420662:1:Tyes0108
MSP266779:3:Tyes0-765-
MSP400668:0:Tyes0132513261320
MSP409:2:Tyes802--0
MSUC221988:0:Tyes0480387289
MXAN246197:0:Tyes0--1000
NARO279238:0:Tyes0-0-
NEUR228410:0:Tyes7067077060
NEUT335283:2:Tyes5725735720
NGON242231:0:Tyes-0-91
NHAM323097:2:Tyes0-0842
NMEN122586:0:Tno01466-1369
NMEN122587:0:Tyes-0-113
NMEN272831:0:Tno-103-0
NMEN374833:0:Tno-0-126
NMUL323848:3:Tyes02950487
NOCE323261:1:Tyes1799-17990
NPHA348780:2:Tyes-0--
NSP103690:6:Tyes-1491-0
NSP387092:0:Tyes0---
NWIN323098:0:Tyes1559-0322
OANT439375:5:Tyes696-0409
OCAR504832:0:Tyes0-427474
OIHE221109:0:Tyes-0--
PABY272844:0:Tyes-0--
PAER208963:0:Tyes0278279262
PAER208964:0:Tno0372237233705
PARC259536:0:Tyes-10152
PATL342610:0:Tyes0163113174
PCAR338963:0:Tyes2730273-
PCRY335284:1:Tyes-01468
PENT384676:0:Tyes0223224206
PFLU205922:0:Tyes493103858
PFLU216595:1:Tyes-1086
PFLU220664:0:Tyes513104085
PFUR186497:0:Tyes-0--
PGIN242619:0:Tyes0---
PHAL326442:1:Tyes1376013771367
PHOR70601:0:Tyes-0--
PING357804:0:Tyes0109517081700
PINT246198:1:Tyes-0918-
PLUM243265:0:Fyes2616026202611
PLUT319225:0:Tyes0-0-
PMEN399739:0:Tyes5951018
PMOB403833:0:Tyes0---
PMUL272843:1:Tyes5510565339
PNAP365044:8:Tyes0107
PPRO298386:2:Tyes2189021902181
PPUT160488:0:Tno1281019
PPUT351746:0:Tyes0130131113
PPUT76869:0:Tno0169170151
PSP117:0:Tyes058020-
PSP296591:2:Tyes0107
PSP312153:0:Tyes0-05
PSP56811:2:Tyes-7897880
PSTU379731:0:Tyes1771018
PSYR205918:0:Tyes1211120
PSYR223283:2:Tyes1110110
PTHE370438:0:Tyes-0--
RDEN375451:4:Tyes---0
RETL347834:5:Tyes0--1124
REUT264198:3:Tyes6560
REUT381666:2:Tyes6560
RFER338969:1:Tyes0208
RLEG216596:6:Tyes70-0945
RMET266264:2:Tyes6560
RPAL258594:0:Tyes64-640
RPAL316055:0:Tyes138-1380
RPAL316056:0:Tyes81-810
RPAL316057:0:Tyes0---
RPAL316058:0:Tyes1424-14240
RPOM246200:1:Tyes0--1600
RRUB269796:1:Tyes0-26303159
RSOL267608:1:Tyes6560
RSP101510:3:Fyes-0--
RSPH272943:3:Tyes0---
RSPH349101:1:Tno0---
RSPH349101:2:Tno---0
RSPH349102:4:Tyes0---
RSPH349102:5:Tyes---0
RXYL266117:0:Tyes-0--
SACI56780:0:Tyes265114670-
SAGA205921:0:Tno-0--
SAGA208435:0:Tno-0--
SAGA211110:0:Tyes-0--
SAUR158878:1:Tno-0--
SAUR158879:1:Tno-0--
SAUR196620:0:Tno-0--
SAUR273036:0:Tno-0--
SAUR282458:0:Tno-0--
SAUR282459:0:Tno-0--
SAUR359786:1:Tno-0--
SAUR359787:1:Tno-0--
SAUR367830:3:Tno-0--
SAUR418127:0:Tyes-0--
SAUR426430:0:Tno-0--
SAUR93061:0:Fno-0--
SAUR93062:1:Tno-0--
SAVE227882:1:Fyes-0--
SBAL399599:3:Tyes1188103235
SBAL402882:1:Tno1177903123
SBOY300268:1:Tyes2443024422448
SCO:2:Fyes-0--
SDEG203122:0:Tyes571-70
SDEN318161:0:Tyes1161102761
SDYS300267:1:Tyes2608026092603
SENT209261:0:Tno1054010551049
SENT220341:0:Tno2497024982492
SENT295319:0:Tno1146011471141
SENT321314:2:Tno2597025982591
SENT454169:2:Tno2712027132706
SEPI176279:1:Tyes-0--
SEPI176280:0:Tno-0--
SERY405948:0:Tyes-0--
SFLE198214:0:Tyes2578025792573
SFLE373384:0:Tno2498024992493
SFUM335543:0:Tyes0224--
SGLO343509:3:Tyes167806
SGOR29390:0:Tyes-0--
SHAE279808:0:Tyes-0--
SHAL458817:0:Tyes1318013191254
SHIGELLA:0:Tno041829332928
SLAC55218:1:Fyes0---
SLOI323850:0:Tyes2801102728020
SMED366394:3:Tyes0--2830
SMEL266834:2:Tyes727--0
SONE211586:1:Tyes3281198232820
SPEA398579:0:Tno1757017581686
SPRO399741:1:Tyes3132031333127
SPYO160490:0:Tno-0--
SPYO186103:0:Tno-0--
SPYO193567:0:Tno-0--
SPYO198466:0:Tno-0--
SPYO286636:0:Tno-0--
SPYO293653:0:Tno-0--
SPYO319701:0:Tyes-0--
SPYO370551:0:Tno-0--
SPYO370552:0:Tno-0--
SPYO370554:0:Tyes-0--
SRUB309807:1:Tyes-0--
SSAP342451:2:Tyes-0--
SSED425104:0:Tyes11190065
SSON300269:1:Tyes2583025842578
SSP1148:0:Tyes---0
SSP292414:2:Tyes0---
SSP644076:6:Fyes---0
SSP644076:7:Fyes0---
SSP94122:1:Tyes851201840
STHE264199:0:Tyes-0--
STHE292459:0:Tyes-0--
STHE299768:0:Tno-0--
STHE322159:2:Tyes-0--
STYP99287:1:Tyes2616026172610
SWOL335541:0:Tyes-0--
TCRU317025:0:Tyes-0-764
TDEN243275:0:Tyes-0--
TDEN292415:0:Tyes4-40
TDEN326298:0:Tyes0-0-
TFUS269800:0:Tyes-0--
TKOD69014:0:Tyes-0--
TPSE340099:0:Tyes-0--
TROS309801:1:Tyes-0--
TSP1755:0:Tyes-0--
TTEN273068:0:Tyes-0--
TTHE262724:1:Tyes-0--
TTHE300852:2:Tyes-0--
TTUR377629:0:Tyes877-70
UMET351160:0:Tyes-0--
VCHO:0:Tyes11528011
VCHO345073:1:Tno1155409
VEIS391735:1:Tyes0102132
VFIS312309:2:Tyes1441014421432
VPAR223926:1:Tyes1438012
VVUL196600:2:Tyes146309
VVUL216895:1:Tno4370438429
WPIP80849:0:Tyes--8440
WSUC273121:0:Tyes--0-
XAUT78245:1:Tyes191-1910
XAXO190486:0:Tyes1526-15260
XCAM190485:0:Tyes1577-15770
XCAM314565:0:Tno2208-22080
XCAM316273:0:Tno0-02169
XCAM487884:0:Tno2277-22770
XFAS160492:2:Tno0-0633
XFAS183190:1:Tyes0-01513
XFAS405440:0:Tno0-01565
XORY291331:0:Tno0-02736
XORY342109:0:Tyes0-02519
XORY360094:0:Tno0-03676
YENT393305:1:Tyes7850786780
YPES187410:5:Tno5116670
YPES214092:3:Tno8290831824
YPES349746:2:Tno5239370
YPES360102:3:Tyes1331013291336
YPES377628:2:Tno2306023082301
YPES386656:2:Tno2123307
YPSE273123:2:Tno5910592586
YPSE349747:2:Tno164907



Back to top