CANDIDATE ID: 891

CANDIDATE ID: 891

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9938317e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG50003 (acpP) (b1094)
   Products of gene:
     - EG50003-MONOMER (apo-[acyl carrier protein])
       Regulatees:
     - ACP-MONOMER (holo-[acyl-carrier protein])
       Regulatees:
     - MYRISTOYL-ACP (myristoyl-ACP)
       Regulatees:
     - B-HYDROXYBUTYRYL-S-ACP (β-3-hydroxybutyryl-S-ACP)
       Regulatees:
     - LAUROYL-ACP (lauroyl-ACP)
       Regulatees:
     - TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
     - STEAROYL-ACYL-CARRIER-PROTEIN (stearoyl-ACP)
       Regulatees:
     - R-3-HYDROXYPALMITOYL-ACP (R-3-hydroxypalmitoyl-ACP)
     - BUTYRYL-ACP (butyryl-ACP)
       Regulatees:
     - OLEOYL-ACYL-CARRIER-PROTEIN (oleoyl-ACP)
       Regulatees:
     - ACETOACETYL-S-ACP (acetoacetyl-ACP)
       Regulatees:
     - MONOMER-4603 (3R-3-hydroxybutanoyl-ACP)
     - CROTONYL-ACP (crotonyl-[acp])
       Regulatees:
     - MONOMER-4565 (2-octenoyl-ACP)
     - CIS-DELTA5-DODECENOYL-ACP (cis-Δ5-dodecenoyl-ACP)
     - BUT-2-ENOYL-ACP (but-2-enoyl-ACP)
     - PALMITOLEOYL-ACP (palmitoleoyl-ACP)
       Regulatees:
     - BETA-KETO-CIS-DELTA5-DODECENOYL-ACP (β-keto-cis-Δ5-dodecenoyl-ACP)
     - TRANS-D2-DECENOYL-ACP (trans-Δ2-decenoyl-[acp])
       Regulatees:
     - BETA-HYDROXY-CIS-DELTA5-DODECENOYL-ACP (β-hydroxy-cis-Δ5-dodecenoyl-ACP)
     - LIPOYL-ACP (lipoyl-ACP)
       Regulatees:
     - 3R-3-HYDROXYOCTANOYL-ACP ((3R)-3-hydroxyoctanoyl-ACP)
     - CIS-3-4-DEHYDRODECANOYL-ACP (cis-3,4-dehydrodecanoyl-ACP)
     - 2-HEXADECENOYL-ACP (2-hexadecenoyl-ACP)
     - CIS-DELTA3-DECENOYL-ACP (cis-Δ3-decenoyl-ACP)
     - SUCC-ACP (succ-ACP)
     - BETA-HYDROXYDECANOYL-ACP (β-hydroxydecanoyl-ACP)
       Regulatees:
     - OCTANOYL-ACP (octanoyl-ACP)
       Regulatees:
     - ACETYL-ECACP (acetyl-ACP)
       Regulatees:

- EG12606 (fabF) (b1095)
   Products of gene:
     - 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
     - 3-OXOACYL-ACP-SYNTHII-CPLX (KASII)
       Reactions:
        a palmitoleoyl-[acp] + a malonyl-[acp]  ->  a 3-oxo-cis-vaccenoyl-[acp] + CO2 + a holo-[acp]
         In pathways
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-6285 (PWY-6285)
         PWY-5973 (cis-vaccenate biosynthesis)
        a malonyl-[acp] + an acetyl-[acp]  ->  a holo-[acp] + an acetoacetyl-[acp] + CO2
         In pathways
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-INITIAL-PWY (superpathway of fatty acid biosynthesis initiation (E. coli))
         PWY-5965 (fatty acid biosynthesis initiation III)
         PWY-5966 (fatty acid biosynthesis initiation II)
        a malonyl-[acp] + a 2,3,4-saturated fatty acyl-[acp]  ->  a holo-[acp] + a beta-ketoacyl-[acp] + CO2
         In pathways
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-ELONG-PWY (fatty acid elongation -- saturated)

- EG11318 (fabG) (b1093)
   Products of gene:
     - 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
       Reactions:
        a 3-oxo-glutaryl-[acp] methyl ester + NADPH + H+  ->  a 3-hydroxyglutaryl-[acp] methyl ester + NADP+
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        a 3-oxo-pimeloyl-[acp] methyl ester + NADPH + H+  ->  a 3-hydroxypimeloyl-[acp] methyl ester + NADP+
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        a 3-oxo-cis-delta9-hexadecenoyl-[acp] + NADPH + H+  ->  a 3-hydroxy cis delta9-hexadecenoyl-[acp] + NADP+
         In pathways
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-6285 (PWY-6285)
         PWY-6282 (palmitoleate biosynthesis I)
        a 3-oxo-cis-delta7-tetradecenoyl-[acp] + NADPH + H+  ->  a 3-hydroxy cis delta7-tetradecenoyl-[acp] + NADP+
         In pathways
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-6285 (PWY-6285)
         PWY-6282 (palmitoleate biosynthesis I)
        a 3-oxo-cis-delta5-dodecenoyl-[acp] + NADPH + H+  ->  a 3-hydroxy cis delta5-dodecenoyl-[acp] + NADP+
         In pathways
         PWY-6285 (PWY-6285)
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         PWY0-862 (cis-dodecenoyl biosynthesis)
        a (3R)-3-hydroxyacyl-[acp] + NADP+  =  a beta-ketoacyl-[acp] + NADPH + H+
         In pathways
         PWY-5989 (PWY-5989)
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-5973 (cis-vaccenate biosynthesis)
         PWY-6285 (PWY-6285)
         PWY-6113 (PWY-6113)
         PWY-5156 (PWY-5156)
         PWY-5994 (PWY-5994)
         PWY-5971 (palmitate biosynthesis II (bacteria and plants))
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-ELONG-PWY (fatty acid elongation -- saturated)

- EG10965 (gmk) (b3648)
   Products of gene:
     - GUANYL-KIN-MONOMER (Gmk)
     - GUANYL-KIN-CPLX (deoxyguanylate kinase / guanylate kinase)
       Reactions:
        ATP + dGMP  =  ADP + 2'-deoxyguanosine-5'-diphosphate + H+
        GMP + ATP  =  GDP + ADP + H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6125 (guanosine nucleotides de novo biosynthesis)
         P1-PWY (P1-PWY)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 389
Effective number of orgs (counting one per cluster within 468 clusters): 278

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTHE300852 ncbi Thermus thermophilus HB84
TTHE262724 ncbi Thermus thermophilus HB274
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP1755 Thermoanaerobacter sp.4
TROS309801 ncbi Thermomicrobium roseum DSM 51593
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TERY203124 ncbi Trichodesmium erythraeum IMS1014
TELO197221 ncbi Thermosynechococcus elongatus BP-14
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-33
SSP84588 ncbi Synechococcus sp. WH 81024
SSP64471 ncbi Synechococcus sp. CC93114
SSP644076 Silicibacter sp. TrichCH4B3
SSP387093 ncbi Sulfurovum sp. NBC37-13
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP292414 ncbi Ruegeria sp. TM10404
SSP1148 ncbi Synechocystis sp. PCC 68034
SSP1131 Synechococcus sp. CC96054
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SRUB309807 ncbi Salinibacter ruber DSM 138553
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SALA317655 ncbi Sphingopyxis alaskensis RB22564
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99413
RTYP257363 ncbi Rickettsia typhi Wilmington3
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSP357808 ncbi Roseiflexus sp. RS-13
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RRIC452659 ncbi Rickettsia rickettsii Iowa4
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith4
RPRO272947 ncbi Rickettsia prowazekii Madrid E3
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
RFEL315456 ncbi Rickettsia felis URRWXCal23
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
RCON272944 ncbi Rickettsia conorii Malish 73
RCAS383372 ncbi Roseiflexus castenholzii DSM 139413
RCAN293613 ncbi Rickettsia canadensis McKiel3
RBEL391896 ncbi Rickettsia bellii OSU 85-3893
RBEL336407 ncbi Rickettsia bellii RML369-C3
RAKA293614 ncbi Rickettsia akari Hartford4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm703
PMEN399739 ncbi Pseudomonas mendocina ymp4
PMAR93060 ncbi Prochlorococcus marinus MIT 92154
PMAR74547 ncbi Prochlorococcus marinus MIT 93133
PMAR74546 ncbi Prochlorococcus marinus MIT 93124
PMAR59920 ncbi Prochlorococcus marinus NATL2A4
PMAR167555 ncbi Prochlorococcus marinus NATL1A4
PMAR167546 ncbi Prochlorococcus marinus MIT 93014
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13754
PMAR146891 ncbi Prochlorococcus marinus AS96014
PLUT319225 ncbi Chlorobium luteolum DSM 2733
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PGIN242619 ncbi Porphyromonas gingivalis W833
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP103690 ncbi Nostoc sp. PCC 71204
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16224
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E3
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
MAER449447 ncbi Microcystis aeruginosa NIES-8434
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53344
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LINN272626 ncbi Listeria innocua Clip112624
LCHO395495 ncbi Leptothrix cholodnii SP-64
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR3
HSOM228400 ncbi Haemophilus somnus 23363
HSOM205914 ncbi Haemophilus somnus 129PT3
HNEP81032 Hyphomonas neptunium4
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW203
HINF374930 ncbi Haemophilus influenzae PittEE3
HINF281310 ncbi Haemophilus influenzae 86-028NP3
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP3
HCHE349521 ncbi Hahella chejuensis KCTC 23963
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74213
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GFOR411154 ncbi Gramella forsetii KT08033
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255864
FJOH376686 ncbi Flavobacterium johnsoniae UW1013
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O13
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0733
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
ECAN269484 ncbi Ehrlichia canis Jake3
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough3
DSP255470 ncbi Dehalococcoides sp. CBDB13
DSP216389 ncbi Dehalococcoides sp. BAV13
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-14
DRAD243230 ncbi Deinococcus radiodurans R13
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DOLE96561 ncbi Desulfococcus oleovorans Hxd33
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DGEO319795 ncbi Deinococcus geothermalis DSM 113003
DETH243164 ncbi Dehalococcoides ethenogenes 1953
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G203
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CTET212717 ncbi Clostridium tetani E883
CTEP194439 ncbi Chlorobium tepidum TLS3
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CNOV386415 ncbi Clostridium novyi NT4
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334063
CDIF272563 ncbi Clostridium difficile 6303
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CCHL340177 ncbi Chlorobium chlorochromatii CaD33
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto4
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBOT498213 ncbi Clostridium botulinum B1 str. Okra4
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CAULO ncbi Caulobacter crescentus CB154
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB43
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHU412694 ncbi Bacillus thuringiensis Al Hakam3
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-273
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54823
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1684
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)3
BQUI283165 ncbi Bartonella quintana Toulouse4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-14
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K163
BCIC186490 Candidatus Baumannia cicadellinicola3
BCER572264 ncbi Bacillus cereus 03BB1023
BCER405917 Bacillus cereus W3
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L3
BCER226900 ncbi Bacillus cereus ATCC 145793
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5834
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1003
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)3
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor3
BANT260799 ncbi Bacillus anthracis Sterne3
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP13
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL033
APLE416269 ncbi Actinobacillus pleuropneumoniae L203
AORE350688 ncbi Alkaliphilus oremlandii OhILAs3
AMET293826 ncbi Alkaliphilus metalliredigens QYMF3
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAEO224324 ncbi Aquifex aeolicus VF53


Names of the homologs of the genes in the group in each of these orgs
  EG50003   EG12606   EG11318   EG10965   
ZMOB264203 ZMO1279ZMO1278ZMO1222ZMO0433
YPSE349747 YPSIP31758_1579YPSIP31758_1580YPSIP31758_1578YPSIP31758_0041
YPSE273123 YPTB2470YPTB2469YPTB2471YPTB0037
YPES386656 YPDSF_1847YPDSF_1846YPDSF_1848YPDSF_3865
YPES377628 YPN_2029YPN_2028YPN_2030YPN_3810
YPES360102 YPA_1925YPA_1924YPA_1926YPA_3502
YPES349746 YPANGOLA_A3498YPANGOLA_A3497YPANGOLA_A3499YPANGOLA_A0045
YPES214092 YPO1600YPO1601YPO1599YPO0040
YPES187410 Y1759Y1760Y1758Y0101
YENT393305 YE1636YE1637YE1635YE0047
XORY360094 XOOORF_4530XOOORF_4529XOOORF_4531XOOORF_4203
XORY342109 XOO0807XOO0808XOO0806XOO1042
XORY291331 XOO0882XOO0883XOO0881XOO1145
XFAS405440 XFASM12_1644XFASM12_1643XFASM12_1645XFASM12_0843
XFAS183190 PD_1502PD_1501PD_1503PD_0720
XFAS160492 XF0672XF0673XF0671XF1503
XCAM487884 XCC-B100_3339XCC-B100_3338XCC-B100_3340XCC-B100_0935
XCAM316273 XCAORF_1219XCAORF_1220XCAORF_1218XCAORF_3590
XCAM314565 XC_3226XC_3225XC_3227XC_0958
XCAM190485 XCC1019XCC1020XCC1018XCC3249
XAXO190486 XAC1128XAC1129XAC1127XAC3395
XAUT78245 XAUT_3132XAUT_3133XAUT_3115XAUT_3136
VVUL216895 VV1_3008VV1_3006VV1_3009VV1_0850
VVUL196600 VV1276VV1277VV1275VV0243
VPAR223926 VP2053VP2052VP2054VP0161
VFIS312309 VF1739VF1738VF1740VF0106
VEIS391735 VEIS_3249VEIS_3248VEIS_3250VEIS_4218
VCHO345073 VC0395_A1606VC0395_A1605VC0395_A1607VC0395_A2280
VCHO VC2020VC2019VC2021VC2708
TTUR377629 TERTU_1721TERTU_1722TERTU_1720TERTU_0174
TTHE300852 TTHA0414TTHA0413TTHA0415TTHA1562
TTHE262724 TT_C0046TT_C0045TT_C0047TT_C1197
TTEN273068 TTE1471TTE1470TTE1472TTE1511
TSP1755 TETH514_1722TETH514_1721TETH514_1723TETH514_1761
TROS309801 TRD_1618TRD_A0447TRD_1621
TPSE340099 TETH39_1286TETH39_1285TETH39_1287TETH39_1324
TERY203124 TERY_0452TERY_0451TERY_3438TERY_2834
TELO197221 TSL1872TLL1871TLR1502TLL0054
TDEN292415 TBD_1548TBD_1547TBD_1549TBD_0473
TCRU317025 TCR_0713TCR_0714TCR_0712TCR_2138
SWOL335541 SWOL_1848SWOL_1850SWOL_1237
STYP99287 STM1196STM1197STM1195STM3740
STHE292459 STH1452STH960STH1451STH1339
SSP94122 SHEWANA3_2557SHEWANA3_2558SHEWANA3_3810
SSP84588 SYNW0143OR2331SYNW0142OR2332SYNW1852OR0681SYNW1837OR2915
SSP64471 GSYN0142GSYN0141GSYN2271GSYN2288
SSP644076 SCH4B_4521SCH4B_4523SCH4B_4519
SSP387093 SUN_2166SUN_2165SUN_2210
SSP321332 CYB_1665CYB_1666CYB_2090CYB_0056
SSP321327 CYA_2874CYA_2873CYA_2483CYA_2697
SSP292414 TM1040_1052TM1040_1054TM1040_1051TM1040_1266
SSP1148 SSL2084SLL1069SLR0886SLR1123
SSP1131 SYNCC9605_0126SYNCC9605_0125SYNCC9605_0617SYNCC9605_0632
SSON300269 SSO_1114SSO_1115SSO_1113SSO_3757
SSED425104 SSED_2623SSED_2622SSED_2624SSED_0336
SSAP342451 SSP1537SSP1797SSP1538SSP1562
SRUB309807 SRU_2754SRU_2753SRU_0045
SPRO399741 SPRO_1907SPRO_1908SPRO_1906SPRO_4867
SPEA398579 SPEA_2493SPEA_2492SPEA_2494SPEA_3877
SONE211586 SO_2775SO_2774SO_2776SO_0361
SMEL266834 SMC00573SMC00574SMC00572SMC00577
SMED366394 SMED_0746SMED_0747SMED_0745SMED_0759
SLOI323850 SHEW_1604SHEW_1605SHEW_1603SHEW_3497
SLAC55218 SL1157_2487SL1157_2491SL1157_2486SL1157_2859
SHIGELLA ACPPFABFFABGGMK
SHAL458817 SHAL_1778SHAL_1779SHAL_1777SHAL_0392
SHAE279808 SH1682SH1972SH1683SH1705
SGLO343509 SG1061SG1062SG1060SG2221
SFUM335543 SFUM_3460SFUM_1375SFUM_1374SFUM_3630
SFLE373384 SFV_1114SFV_1115SFV_1113SFV_3881
SFLE198214 AAN42717.1AAN42718.1AAN42716.1AAN45135.1
SEPI176280 SE_0907SE_0678SE_0906SE_0885
SEPI176279 SERP0798SERP0568SERP0797SERP0776
SENT454169 SEHA_C1310SEHA_C1311SEHA_C1309SEHA_C4066
SENT321314 SCH_1144SCH_1145SCH_1143SCH_3664
SENT295319 SPA1655SPA1654SPA1656SPA3592
SENT220341 STY1235STY1236STY1234STY4052
SENT209261 T1724T1723T1725T3778
SELO269084 SYC0985_CSYC0984_CSYC0845_CSYC0359_C
SDYS300267 SDY_2056SDY_2055SDY_2057SDY_4080
SDEN318161 SDEN_2292SDEN_2291SDEN_2293SDEN_3433
SDEG203122 SDE_1630SDE_1631SDE_1629SDE_3695
SBOY300268 SBO_1969SBO_1968SBO_1970SBO_3729
SBAL402882 SHEW185_1717SHEW185_1718SHEW185_1716SHEW185_0353
SBAL399599 SBAL195_1760SBAL195_1761SBAL195_1759SBAL195_0360
SAUR93062 SACOL1247SACOL0988SACOL1245SACOL1221
SAUR93061 SAOUHSC_01201SAOUHSC_00921SAOUHSC_01199SAOUHSC_01176
SAUR426430 NWMN_1142NWMN_0854NWMN_1141NWMN_1120
SAUR418127 SAHV_1222SAHV_0979SAHV_1221SAHV_1199
SAUR367830 SAUSA300_1125SAUSA300_0886SAUSA300_1124SAUSA300_1102
SAUR359787 SAURJH1_1316SAURJH1_1002SAURJH1_1315SAURJH1_1293
SAUR359786 SAURJH9_1291SAURJH9_0983SAURJH9_1290SAURJH9_1268
SAUR282459 SAS1166SAS0854SAS1165SAS1143
SAUR282458 SAR1208SAR0947SAR1207SAR1185
SAUR273036 SAB1096SAB0849SAB1095SAB1073
SAUR196620 MW1115MW0866MW1114MW1092
SAUR158879 SA1075SA0843SA1074SA1052
SAUR158878 SAV1232SAV0984SAV1231SAV1209
SALA317655 SALA_0280SALA_0281SALA_1896SALA_3155
RXYL266117 RXYL_1382RXYL_1381RXYL_1473
RTYP257363 RT0750RT0748RT0752
RSPH349102 RSPH17025_1070RSPH17025_1071RSPH17025_1069RSPH17025_1104
RSPH349101 RSPH17029_1125RSPH17029_1126RSPH17029_1124RSPH17029_1563
RSPH272943 RSP_2463RSP_2464RSP_2461RSP_2919
RSP357808 ROSERS_0984ROSERS_4603ROSERS_0987
RSOL267608 RSC1053RSC1054RSC1052RSC2155
RRUB269796 RRU_A0417RRU_A0418RRU_A0416RRU_A0429
RRIC452659 RRIOWA_1393RRIOWA_1394RRIOWA_1392RRIOWA_1399
RRIC392021 A1G_06505A1G_06510A1G_06495A1G_06535
RPRO272947 RP764RP762RP765
RPOM246200 SPO_2274SPO_2271SPO_2275SPO_1945
RPAL316058 RPB_2468RPB_2469RPB_2467RPB_2472
RPAL316057 RPD_2978RPD_2977RPD_2979RPD_2974
RPAL316056 RPC_2301RPC_2302RPC_2300RPC_2305
RPAL316055 RPE_3305RPE_3304RPE_3306RPE_3301
RPAL258594 RPA3073RPA3072RPA3074RPA3069
RMET266264 RMET_2427RMET_2426RMET_2428RMET_0856
RLEG216596 RL1559RL1560RL1558RL1563
RFER338969 RFER_1733RFER_1734RFER_1732RFER_3147
RFEL315456 RF_1224RF_1222RF_1229
REUT381666 H16_A2566H16_A2565H16_A2567H16_A0953
REUT264198 REUT_A2262REUT_A2261REUT_A2263REUT_A2473
RETL347834 RHE_CH01444RHE_CH01445RHE_CH01443RHE_CH01448
RDEN375451 RD1_3038RD1_3036RD1_3039RD1_2638
RCON272944 RC1186RC1183RC1194
RCAS383372 RCAS_3256RCAS_0379RCAS_3253
RCAN293613 A1E_04875A1E_04880A1E_04920
RBEL391896 A1I_07360A1I_07350A1I_07245
RBEL336407 RBE_0114RBE_0116RBE_0134
RAKA293614 A1C_05940A1C_05945A1C_05935A1C_05985
PSYR223283 PSPTO_3831PSPTO_3830PSPTO_3832PSPTO_0075
PSYR205918 PSYR_1648PSYR_1649PSYR_1647PSYR_0211
PSTU379731 PST_2621PST_2620PST_2622PST_0461
PSP56811 PSYCPRWF_0458PSYCPRWF_0208PSYCPRWF_0457PSYCPRWF_0577
PSP312153 PNUC_0401PNUC_0402PNUC_0400PNUC_1078
PSP296591 BPRO_3646BPRO_3645BPRO_3647BPRO_1335
PPUT76869 PPUTGB1_1491PPUTGB1_1492PPUTGB1_1490PPUTGB1_5344
PPUT351746 PPUT_3799PPUT_3798PPUT_3800PPUT_5204
PPUT160488 PP_1915PP_1916PP_1914PP_5296
PPRO298386 PBPRA1196PBPRA1197PBPRA1195PBPRA0191
PNAP365044 PNAP_3071PNAP_3070PNAP_3072PNAP_0811
PMUL272843 PM1917PM1916PM0922
PMEN399739 PMEN_1629PMEN_1630PMEN_1628PMEN_4388
PMAR93060 P9215_18821P9215_18831P9215_05331P9215_05471
PMAR74547 PMT1955PMT1956PMT1333
PMAR74546 PMT9312_1701PMT9312_1702PMT9312_0453PMT9312_0467
PMAR59920 PMN2A_1185PMN2A_1186PMN2A_1785PMN2A_1799
PMAR167555 NATL1_20601NATL1_20611NATL1_05081NATL1_05221
PMAR167546 P9301ORF_1839P9301ORF_1840P9301ORF_0489P9301ORF_0503
PMAR167539 PRO_1768PRO_1769PRO_0452PRO_0465
PMAR146891 A9601_18181A9601_18191A9601_05091A9601_05231
PLUT319225 PLUT_0130PLUT_0129PLUT_0131
PLUM243265 PLU2832PLU2831PLU2833PLU0274
PING357804 PING_1090PING_1091PING_1089PING_3623
PHAL326442 PSHAA1807PSHAA1806PSHAA1808PSHAA2790
PGIN242619 PG_1765PG_1764PG_1239
PFLU220664 PFL_1797PFL_1798PFL_1796PFL_6061
PFLU216595 PFLU4704PFLU4703PFLU4705PFLU5993
PFLU205922 PFL_4156PFL_4155PFL_4157PFL_5549
PENT384676 PSEEN1620PSEEN1621PSEEN1618PSEEN5441
PCRY335284 PCRYO_0517PCRYO_2271PCRYO_0516PCRYO_2003
PCAR338963 PCAR_1439PCAR_1440PCAR_1438PCAR_1285
PATL342610 PATL_2121PATL_2120PATL_2122PATL_0347
PARC259536 PSYC_0522PSYC_1972PSYC_0521PSYC_1723
PAER208964 PA2966PA2965PA2967PA5336
PAER208963 PA14_25670PA14_25690PA14_25660PA14_70440
OIHE221109 OB1525OB1205OB1524OB1502
OCAR504832 OCAR_6367OCAR_6366OCAR_6369OCAR_6363
OANT439375 OANT_0572OANT_0573OANT_0571OANT_0576
NWIN323098 NWI_1687NWI_1686NWI_1688NWI_1683
NSP103690 ASR3342ALR3343ALR1894ALR0106
NOCE323261 NOC_1664NOC_1663NOC_1665NOC_1212
NMUL323848 NMUL_A1075NMUL_A1076NMUL_A1074NMUL_A0052
NMEN374833 NMCC_1925NMCC_1926NMCC_0298NMCC_1571
NMEN272831 NMC0217NMC0216NMC0302NMC1579
NMEN122587 NMA0043NMA0044NMA0533NMA1919
NMEN122586 NMB_0220NMB_0219NMB_1921NMB_1661
NHAM323097 NHAM_2352NHAM_2351NHAM_2353NHAM_2348
NGON242231 NGO1762NGO1763NGO2163NGO1310
NEUT335283 NEUT_0467NEUT_0466NEUT_0468NEUT_0614
NEUR228410 NE1649NE1650NE1648NE2254
NARO279238 SARO_1339SARO_1340SARO_1428SARO_1003
MXAN246197 MXAN_4769MXAN_4768MXAN_4770MXAN_4705
MTHE264732 MOTH_0949MOTH_0950MOTH_0948
MSUC221988 MS1875MS1874MS1738
MSP409 M446_3198M446_3197M446_3199M446_3193
MSP400668 MMWYL1_2133MMWYL1_2134MMWYL1_2132MMWYL1_4384
MSP266779 MESO_1767MESO_1766MESO_1768MESO_1763
MPET420662 MPE_A0639MPE_A0640MPE_A0638MPE_A2715
MMAR394221 MMAR10_1216MMAR10_1217MMAR10_1215MMAR10_1220
MMAG342108 AMB2107AMB2108AMB2106AMB0748
MLOT266835 MSR7851MLR7852MLR7850MLR7857
MFLA265072 MFLA_1504MFLA_1503MFLA_1505MFLA_0048
MEXT419610 MEXT_0558MEXT_0559MEXT_0557MEXT_2000
MCAP243233 MCA_2000MCA_1999MCA_2001MCA_2975
MAQU351348 MAQU_1866MAQU_1865MAQU_1867MAQU_0634
MAER449447 MAE_14950MAE_14960MAE_33900MAE_11850
LWEL386043 LWE1825LWE2218LWE1826LWE1846
LSPH444177 BSPH_1520BSPH_1214BSPH_1519BSPH_1484
LPNE400673 LPC_0812LPC_0813LPC_0811LPC_1494
LPNE297246 LPP1351LPP1352LPP1350LPP1992
LPNE297245 LPL1347LPL1348LPL1346LPL1987
LPNE272624 LPG1396LPG1397LPG1395LPG2010
LMON265669 LMOF2365_1834LMOF2365_2234LMOF2365_1835LMOF2365_1855
LMON169963 LMO1806LMO2201LMO1807LMO1827
LINN272626 LIN1920LIN2304LIN1921LIN1941
LCHO395495 LCHO_0608LCHO_0607LCHO_0609LCHO_0729
KPNE272620 GKPORF_B0005GKPORF_B0006GKPORF_B0004GKPORF_B3357
JSP375286 MMA_1359MMA_1360MMA_1358MMA_1328
JSP290400 JANN_1627JANN_1629JANN_1626JANN_2440
ILOI283942 IL1339IL1340IL2382
HSOM228400 HSM_0035HSM_0034HSM_0546
HSOM205914 HS_0168HS_0167HS_1457
HNEP81032 HNE_2157HNE_2156HNE_2158HNE_2153
HMOD498761 HM1_2166HM1_2168HM1_2165HM1_2127
HINF71421 HI_0154HI_0155HI_1743
HINF374930 CGSHIEE_02515CGSHIEE_02510CGSHIEE_03320
HINF281310 NTHI0243NTHI0244NTHI2054
HHAL349124 HHAL_1232HHAL_0003HHAL_1233HHAL_0976
HDUC233412 HD_1931HD_0708HD_1830
HCHE349521 HCH_02145HCH_02144HCH_06315
HARS204773 HEAR2074HEAR2073HEAR2075HEAR2130
GVIO251221 GLR2311GLL4014GLR3506
GURA351605 GURA_1878GURA_1879GURA_1877GURA_3162
GTHE420246 GTNG_1044GTNG_0685GTNG_1043GTNG_1020
GSUL243231 GSU_1604GSU_1605GSU_1603GSU_2238
GOXY290633 GOX2041GOX2042GOX2040GOX0989
GMET269799 GMET_1602GMET_1603GMET_1601GMET_2327
GKAU235909 GK1191GK0805GK1190GK1167
GFOR411154 GFO_3382GFO_3383GFO_1767
GBET391165 GBCGDNIH1_2209GBCGDNIH1_2208GBCGDNIH1_2211GBCGDNIH1_2205
FTUL458234 FTA_1201FTA_1200FTA_1202FTA_1478
FTUL418136 FTW_0515FTW_0514FTW_0516FTW_0628
FTUL401614 FTN_1340FTN_1341FTN_1339FTN_0691
FTUL393115 FTF1376FTF1377FTF1375FTF1470C
FTUL393011 FTH_1113FTH_1112FTH_1114FTH_1353
FTUL351581 FTL_1138FTL_1137FTL_1139FTL_1391
FRANT ACPPFABFFABGGMK
FPHI484022 FPHI_1348FPHI_1347FPHI_1349FPHI_1850
FNUC190304 FN0150FN0151FN0494FN2033
FJOH376686 FJOH_1137FJOH_1138FJOH_2889
ESP42895 ENT638_1609ENT638_1610ENT638_1608ENT638_0091
ELIT314225 ELI_03985ELI_03990ELI_07335ELI_09585
EFER585054 EFER_1833EFER_1832EFER_1834EFER_3940
ECOO157 ACPPFABFFABGGMK
ECOL83334 ECS1472ECS1473ECS1471ECS4523
ECOL585397 ECED1_1237ECED1_1238ECED1_1236ECED1_4332
ECOL585057 ECIAI39_2067ECIAI39_2066ECIAI39_2068ECIAI39_4170
ECOL585056 ECUMN_1269ECUMN_1270ECUMN_1268ECUMN_4164
ECOL585055 EC55989_1206EC55989_1207EC55989_1205EC55989_4114
ECOL585035 ECS88_1108ECS88_1109ECS88_1107ECS88_4063
ECOL585034 ECIAI1_1129ECIAI1_1130ECIAI1_1128ECIAI1_3820
ECOL481805 ECOLC_2507ECOLC_2506ECOLC_2508ECOLC_0063
ECOL469008 ECBD_2507ECBD_2506ECBD_2508ECBD_0077
ECOL439855 ECSMS35_2033ECSMS35_2032ECSMS35_2034ECSMS35_3983
ECOL413997 ECB_01090ECB_01091ECB_01089ECB_03505
ECOL409438 ECSE_1158ECSE_1159ECSE_1157ECSE_3930
ECOL405955 APECO1_176APECO1_174APECO1_2813
ECOL364106 UTI89_C1220UTI89_C1221UTI89_C1218UTI89_C4193
ECOL362663 ECP_1086ECP_1087ECP_1085ECP_3746
ECOL331111 ECE24377A_1215ECE24377A_1216ECE24377A_1214ECE24377A_4151
ECOL316407 ECK1080:JW1080:B1094ECK1081:JW1081:B1095ECK1079:JW1079:B1093ECK3638:JW3623:B3648
ECOL199310 C1364C1365C4473
ECAR218491 ECA1798ECA1799ECA1797ECA0040
ECAN269484 ECAJ_0218ECAJ_0374ECAJ_0681
DVUL882 DVU_1205DVU_1204DVU_1206
DSP255470 CBDBA1208CBDBA921CBDBA1205
DSP216389 DEHABAV1_1090DEHABAV1_0854DEHABAV1_1088
DSHI398580 DSHI_2181DSHI_2180DSHI_2182DSHI_1529
DRED349161 DRED_2071DRED_2070DRED_2072DRED_1700
DRAD243230 DR_1942DR_1941DR_1943
DPSY177439 DP2789DP2788DP2790DP2860
DOLE96561 DOLE_2083DOLE_2084DOLE_1910
DNOD246195 DNO_1210DNO_1211DNO_1209DNO_0645
DHAF138119 DSY2659DSY2657DSY2660DSY2729
DGEO319795 DGEO_0436DGEO_0437DGEO_0435
DETH243164 DET_1279DET_0963DET_1277
DDES207559 DDE_2430DDE_2431DDE_2429
DARO159087 DARO_2018DARO_2019DARO_2017DARO_3845
CVIO243365 CV_3413CV_3412CV_3414CV_3770
CVES412965 COSY_0520COSY_0521COSY_0822COSY_0513
CTET212717 CTC_00131CTC_00130CTC_01216
CTEP194439 CT_2117CT_2118CT_2116
CSP78 CAUL_2519CAUL_2520CAUL_2518CAUL_2523
CSP501479 CSE45_1771CSE45_1339CSE45_1769CSE45_1806
CSAL290398 CSAL_1602CSAL_1603CSAL_1601CSAL_3233
CRUT413404 RMAG_0565RMAG_0566RMAG_0916RMAG_0559
CPSY167879 CPS_2298CPS_2299CPS_2297CPS_4971
CPER289380 CPR_1691CPR_1139CPR_1138CPR_1719
CPER195103 CPF_1973CPF_1327CPF_1326CPF_2001
CPER195102 CPE1719CPE1071CPE1070CPE1748
CNOV386415 NT01CX_2220NT01CX_0926NT01CX_0925NT01CX_2249
CJAP155077 CJA_1677CJA_1678CJA_1676CJA_3569
CHYD246194 CHY_1446CHY_1445CHY_1447CHY_1488
CHUT269798 CHU_1398CHU_1397CHU_1085
CDIF272563 CD1184CD1182CD2588
CDES477974 DAUD_0643DAUD_0644DAUD_0642DAUD_1597
CCHL340177 CAG_1661CAG_1660CAG_1662
CBUR434922 COXBU7E912_1580COXBU7E912_1579COXBU7E912_1581COXBU7E912_1780
CBUR360115 COXBURSA331_A0605COXBURSA331_A0606COXBURSA331_A0604COXBURSA331_A0407
CBUR227377 CBU_0496CBU_0497CBU_0495CBU_0301
CBOT536232 CLM_2749CLM_4091CLM_4092CLM_2814
CBOT515621 CLJ_B2680CLJ_B3928CLJ_B3929CLJ_B2744
CBOT508765 CLL_A1151CLL_A1150CLL_A1211
CBOT498213 CLD_2185CLD_0887CLD_0886CLD_2123
CBOT441772 CLI_2512CLI_3824CLI_3825CLI_2575
CBOT441771 CLC_2304CLC_3577CLC_3578CLC_2369
CBOT441770 CLB_2320CLB_3679CLB_3680CLB_2387
CBOT36826 CBO2455CBO3599CBO3600CBO2513
CBLO291272 BPEN_415BPEN_416BPEN_641
CBLO203907 BFL403BFL404BFL616
CBEI290402 CBEI_1072CBEI_1071CBEI_1141
CAULO CC1677CC1678CC1675CC1681
CACE272562 CAC1747CAC3573CAC3574CAC1718
BWEI315730 BCERKBAB4_3673BCERKBAB4_1083BCERKBAB4_3674
BVIE269482 BCEP1808_1043BCEP1808_1044BCEP1808_1042BCEP1808_0916
BTRI382640 BT_0818BT_0819BT_0817BT_0821
BTHU412694 BALH_3481BALH_1037BALH_3482
BTHU281309 BT9727_3591BT9727_1078BT9727_3592
BTHE226186 BT_3359BT_3358BT_3771
BTHA271848 BTH_I1720BTH_I1721BTH_I1719BTH_I1586
BSUI470137 BSUIS_A0485BSUIS_A0487BSUIS_A0484BSUIS_A0490
BSUI204722 BR_0459BR_0461BR_0458BR_0464
BSUB BSU15920BSU11340BSU15910BSU15680
BSP376 BRADO3313BRADO3314BRADO3311BRADO3317
BSP36773 BCEP18194_A4236BCEP18194_A4237BCEP18194_A4235BCEP18194_A4107
BSP107806 BU352BU351BU434
BQUI283165 BQ04540BQ04550BQ04530BQ04570
BPUM315750 BPUM_1491BPUM_1058BPUM_1490BPUM_1467
BPSE320373 BURPS668_2789BURPS668_2788BURPS668_2790BURPS668_2949
BPSE320372 BURPS1710B_A3152BURPS1710B_A3151BURPS1710B_A3153BURPS1710B_A3306
BPSE272560 BPSL2439BPSL2438BPSL2440BPSL2563
BPET94624 BPET1756BPET1757BPET1755BPET2248
BPER257313 BP2440BP2439BP2441BP1578
BPAR257311 BPP3304BPP3303BPP3305BPP3005
BOVI236 GBOORF0488GBOORF0489GBOORF0487GBOORF0493
BMEL359391 BAB1_0484BAB1_0486BAB1_0483BAB1_0489
BMEL224914 BMEI1475BMEI1473BMEI1477BMEI1469
BMAL320389 BMA10247_1799BMA10247_1798BMA10247_1800BMA10247_1964
BMAL320388 BMASAVP1_A2476BMASAVP1_A2475BMASAVP1_A2477BMASAVP1_A0815
BMAL243160 BMA_0533BMA_0534BMA_0532BMA_2096
BLIC279010 BL02316BL03314BL02315BL02293
BJAP224911 BSR4084BLR4085BLR4083BLR4088
BHEN283166 BH05360BH05370BH05350BH05390
BHAL272558 BH2490BH2882BH2491BH2512
BCLA66692 ABC2300ABC2546ABC2301
BCIC186490 BCI_0433BCI_0434BCI_0110
BCER572264 BCA_3950BCA_1218BCA_3951
BCER405917 BCE_3892BCE_1294BCE_3893
BCER315749 BCER98_2502BCER98_0891BCER98_2503BCER98_2523
BCER288681 BCE33L3609BCE33L1072BCE33L3610
BCER226900 BC_3848BC_1174BC_3849
BCEN331272 BCEN2424_1124BCEN2424_1125BCEN2424_1123BCEN2424_0999
BCEN331271 BCEN_0644BCEN_0645BCEN_0643BCEN_0520
BCAN483179 BCAN_A0464BCAN_A0466BCAN_A0463BCAN_A0469
BBRO257310 BB3755BB3754BB3756BB2971
BBAC360095 BARBAKC583_0498BARBAKC583_0499BARBAKC583_0497BARBAKC583_0502
BBAC264462 BD2011BD2010BD2012
BAPH198804 BUSG340BUSG339BUSG419
BANT592021 BAA_4012BAA_1262BAA_4013BAA_4033
BANT568206 BAMEG_0643BAMEG_3402BAMEG_0642
BANT261594 GBAA3988GBAA1185GBAA3989
BANT260799 BAS3701BAS1096BAS3702
BAMY326423 RBAM_015750RBAM_011340RBAM_015740RBAM_015510
BAMB398577 BAMMC406_1004BAMMC406_1005BAMMC406_1003BAMMC406_0871
BAMB339670 BAMB_1000BAMB_1001BAMB_0999BAMB_0859
BABO262698 BRUAB1_0481BRUAB1_0483BRUAB1_0480BRUAB1_0486
AVAR240292 AVA_3647AVA_3646AVA_3764AVA_1475
ASP76114 EBD12EBA5459EBA5457EBA3494
ASP62977 ACIAD0872ACIAD0871ACIAD3324
ASP62928 AZO1626AZO1627AZO1625AZO3953
ASP232721 AJS_3277AJS_3276AJS_3278AJS_0947
ASAL382245 ASA_2053ASA_2052ASA_2054ASA_0036
APLE434271 APJL_1855APJL_2040APJL_0264
APLE416269 APL_1819APL_1992APL_0256
AORE350688 CLOS_1457CLOS_1455CLOS_1423
AMET293826 AMET_2753AMET_2755AMET_2790
AMAR329726 AM1_5523AM1_5522AM1_5632AM1_5497
AHYD196024 AHA_2252AHA_2253AHA_2251AHA_0041
AFER243159 AFE_1178AFE_1177AFE_1179AFE_2475
AEHR187272 MLG_1420MLG_1419MLG_1421MLG_2444
ADEH290397 ADEH_2747ADEH_2746ADEH_2748ADEH_2606
ACRY349163 ACRY_1527ACRY_1528ACRY_1526ACRY_1447
ACAU438753 AZC_4314AZC_4315AZC_4313AZC_4318
ABOR393595 ABO_1070ABO_1071ABO_1069ABO_0178
ABAU360910 BAV1122BAV1123BAV1121BAV1955
ABAC204669 ACID345_4505ACID345_4506ACID345_0265ACID345_3778
AAVE397945 AAVE_1186AAVE_1187AAVE_1185AAVE_3583
AAEO224324 AQ_1717AAQ_1717AQ_1716


Organism features enriched in list (features available for 366 out of the 389 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00406654792
Arrangment:Pairs 0.000037288112
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00563981111
Endospores:No 2.671e-2673211
Endospores:Yes 0.00357434253
GC_Content_Range4:0-40 7.038e-8104213
GC_Content_Range4:40-60 0.0006273158224
GC_Content_Range4:60-100 0.0027921104145
GC_Content_Range7:0-30 0.00825052247
GC_Content_Range7:30-40 0.000012382166
GC_Content_Range7:50-60 3.042e-687107
GC_Content_Range7:60-70 0.0000860102134
GC_Content_Range7:70-100 0.0027551211
Genome_Size_Range5:0-2 1.390e-2543155
Genome_Size_Range5:4-6 6.175e-15156184
Genome_Size_Range9:0-1 1.693e-6527
Genome_Size_Range9:1-2 4.451e-1838128
Genome_Size_Range9:3-4 0.00889695777
Genome_Size_Range9:4-5 1.193e-68096
Genome_Size_Range9:5-6 1.061e-77688
Genome_Size_Range9:6-8 0.00197053238
Gram_Stain:Gram_Neg 6.520e-19260333
Gram_Stain:Gram_Pos 7.679e-867150
Habitat:Host-associated 0.0001008109206
Habitat:Multiple 0.0034782125178
Habitat:Terrestrial 0.00581862631
Motility:No 4.412e-1161151
Motility:Yes 1.693e-7197267
Optimal_temp.:- 0.0000311184257
Optimal_temp.:25-30 0.00012041919
Optimal_temp.:30-37 0.00019551818
Optimal_temp.:35-37 0.00217001313
Optimal_temp.:37 0.000023448106
Oxygen_Req:Aerobic 0.0099410127185
Oxygen_Req:Anaerobic 0.000069247102
Oxygen_Req:Microaerophilic 0.0073756618
Pathogenic_in:Animal 0.00702685066
Salinity:Non-halophilic 0.000540752106
Shape:Coccobacillus 0.00563981111
Shape:Coccus 0.00008613682
Shape:Irregular_coccus 0.0000150217
Shape:Rod 3.062e-17266347
Shape:Sphere 0.0000246319
Shape:Spiral 3.548e-9534
Temp._range:Hyperthermophilic 7.123e-7323



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 189
Effective number of orgs (counting one per cluster within 468 clusters): 151

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMOB403833 ncbi Petrotoga mobilis SJ951
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
FSP106370 ncbi Frankia sp. CcI30
FMAG334413 ncbi Finegoldia magna ATCC 293281
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-401
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCUR360105 ncbi Campylobacter curvus 525.921
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  EG50003   EG12606   EG11318   EG10965   
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276
TLET416591 TLET_1787
TKOD69014
TFUS269800
TDEN243275
TACI273075
STRO369723
STOK273063
STHE322159 STER_1398
STHE299768 STR1431
STHE264199 STU1431
SSUI391296 SSU98_0409
SSUI391295 SSU05_0422
SSOL273057
SPYO370554 MGAS10750_SPY1450
SPYO370553 MGAS2096_SPY1362
SPYO370552 MGAS10270_SPY1457
SPYO370551 MGAS9429_SPY1336
SPYO319701 M28_SPY1382
SPYO293653 M5005_SPY1341
SPYO286636 M6_SPY1387
SPYO198466 SPYM3_1375
SPYO193567 SPS0487
SPYO186103 SPYM18_1642
SPYO160490 SPY1632
SPNE488221 SP70585_1778
SPNE487214 SPH_1847
SPNE487213 SPT_1676
SPNE171101 SPR1583
SPNE170187 SPN02041
SPNE1313 SPJ_1634
SMUT210007 SMU_478
SMAR399550
SGOR29390 SGO_0594
SERY405948
SARE391037
SAGA211110 GBS0301
SAGA208435 SAG_0313
SAGA205921 SAK_0383
SACI330779
RSP101510
RSAL288705
RALB246199 GRAORF_1839
PTOR263820
PMOB403833 PMOB_0100
PISL384616
PHOR70601
PFUR186497
PDIS435591 BDI_1496
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
NSP35761 NOCA_2571
NSEN222891 NSE_0726
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196 MSMEG_3150
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007
LXYL281090
LSAK314315 LSA0685
LREU557436 LREU_1176
LPLA220668 LP_1612
LMES203120 LEUM_1713
LLAC272623 L149828
LLAC272622 LACR_2158
LJOH257314 LJ_1543
LINT363253 LI0160
LINT267671 LIC_20065
LINT189518 LB083
LHEL405566
LGAS324831 LGAS_0758
LDEL390333 LDB1415
LDEL321956 LBUL_1312
LCAS321967 LSEI_1629
LBRE387344
LBIF456481 LEPBI_I2585
LBIF355278 LBF_2505
LACI272621 LBA1325
KRAD266940
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0505
HPYL357544 HPAG1_0536
HPY HP0558
HMUK485914
HMAR272569
HBUT415426
HACI382638 HAC_0779
FSP106370
FMAG334413 FMG_0657
FALN326424 FRAAL6827
ERUM302409 ERGA_CDS_02130
CSUL444179 SMGWSS_016
CPRO264201 PC1718
CPNE182082 CPB0304
CPNE138677 CPJ0295
CPNE115713 CPN0295
CPNE115711 CP_0463
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0417
CJEJ360109 JJD26997_1495
CJEJ354242 CJJ81176_0469
CJEJ195099 CJE_0494
CJEJ192222 CJ0442
CJEI306537
CHOM360107 CHAB381_0229
CGLU196627
CFET360106 CFF8240_1363
CEFF196164
CDIP257309
CCUR360105 CCV52592_1911
BXEN266265
BTUR314724
BLON206672
BHER314723
BGAR290434
BBUR224326
BAPH372461 BCC_217
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667
APER272557
ANAE240017
AMAR234826 AM338
ALAI441768 ACL_0304
AFUL224325
ACEL351607 ACEL_1151
AAUR290340


Organism features enriched in list (features available for 179 out of the 189 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00040794292
Arrangment:Pairs 0.000315120112
Disease:Wide_range_of_infections 1.837e-61111
Endospores:No 5.516e-30126211
Endospores:Yes 0.0004075653
GC_Content_Range4:0-40 2.428e-690213
GC_Content_Range4:40-60 0.000163950224
GC_Content_Range7:0-30 0.00662432247
GC_Content_Range7:30-40 0.000292468166
GC_Content_Range7:50-60 0.000023516107
Genome_Size_Range5:0-2 3.748e-2094155
Genome_Size_Range5:4-6 8.423e-1223184
Genome_Size_Range9:0-1 2.194e-62027
Genome_Size_Range9:1-2 2.493e-1374128
Genome_Size_Range9:3-4 0.00353221477
Genome_Size_Range9:4-5 0.00001541396
Genome_Size_Range9:5-6 3.466e-61088
Genome_Size_Range9:6-8 0.0064190538
Gram_Stain:Gram_Neg 1.532e-2644333
Gram_Stain:Gram_Pos 3.617e-1077150
Habitat:Host-associated 0.002762677206
Motility:No 3.256e-1281151
Motility:Yes 2.495e-657267
Optimal_temp.:- 0.000012056257
Optimal_temp.:30-35 0.003871267
Optimal_temp.:37 0.000818846106
Optimal_temp.:85 0.008680944
Oxygen_Req:Anaerobic 0.004218742102
Pathogenic_in:Animal 0.0004410966
Pathogenic_in:Swine 0.002623855
Salinity:Non-halophilic 0.000036050106
Shape:Coccus 1.687e-64482
Shape:Irregular_coccus 9.162e-71517
Shape:Rod 1.585e-1760347
Shape:Sphere 1.346e-61619
Shape:Spiral 0.00002072234
Temp._range:Hyperthermophilic 1.977e-61823



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5918 (heme biosynthesis I)2722550.5691
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862610.5482
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002670.5286
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482960.5254
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))5053760.5133
PWY-1269 (CMP-KDO biosynthesis I)3252780.4981
GLYCOCAT-PWY (glycogen degradation I)2462270.4977
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3983200.4933
PWY-5913 (TCA cycle variation IV)3012620.4912
PWY0-501 (lipoate biosynthesis and incorporation I)3853120.4885
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4223300.4715
PWY-5188 (tetrapyrrole biosynthesis I)4393390.4715
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262740.4675
FASYN-ELONG-PWY (fatty acid elongation -- saturated)5213770.4630
ARO-PWY (chorismate biosynthesis I)5103720.4607
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2252070.4589
PWY-4041 (γ-glutamyl cycle)2792430.4585
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4583470.4584
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392800.4547
PWY-5340 (sulfate activation for sulfonation)3853070.4544
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951850.4520
PANTO-PWY (pantothenate biosynthesis I)4723530.4508
PWY-5966 (fatty acid biosynthesis initiation II)4913620.4495
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831760.4492
PWY-6124 (inosine-5'-phosphate biosynthesis II)5353810.4468
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652940.4448
PWY-5386 (methylglyoxal degradation I)3052570.4413
PWY-5965 (fatty acid biosynthesis initiation III)4893600.4410
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912480.4405
PWY0-1264 (biotin-carboxyl carrier protein assembly)5143710.4367
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081920.4366
FAO-PWY (fatty acid β-oxidation I)4573430.4322
THISYN-PWY (thiamin biosynthesis I)5023650.4319
PWY-6387 (UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-DAP-containing))5393810.4314
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181980.4300
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2892450.4290
PEPTIDOGLYCANSYN-PWY (peptidoglycan biosynthesis I (meso-diaminopimelate containing))5403810.4275
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491480.4271
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962490.4260
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911780.4223
TYRFUMCAT-PWY (tyrosine degradation I)1841730.4222
PWY-5194 (siroheme biosynthesis)3122580.4189
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552210.4164
PWY-6147 (6-hydroxymethyl-dihydropterin diphosphate biosynthesis)5313760.4152
RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))5233720.4103
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112560.4098
PWY-6126 (adenosine nucleotides de novo biosynthesis)5533840.4062
PWY0-862 (cis-dodecenoyl biosynthesis)3432750.4053
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902420.4048
PWY-6164 (3-dehydroquinate biosynthesis I)5163680.4026
GLYCLEAV-PWY (glycine cleavage complex)3442750.4013



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12606   EG11318   EG10965   
EG500030.999990.999990.998925
EG126060.9999520.998581
EG113180.998861
EG10965



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PAIRWISE BLAST SCORES:

  EG50003   EG12606   EG11318   EG10965   
EG500030.0f0---
EG12606-0.0f0--
EG11318--0.0f0-
EG10965---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PWY-5973 (cis-vaccenate biosynthesis) (degree of match pw to cand: 0.600, degree of match cand to pw: 0.750, average score: 0.960)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9986 EG12606 (fabF) 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
   *in cand* 0.9997 0.9989 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
             0.8182 0.5176 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.7135 0.0036 EG10273 (fabA) FABA-MONOMER (FabA)
   *in cand* 0.9997 0.9989 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9986 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)

- PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli)) (degree of match pw to cand: 0.231, degree of match cand to pw: 0.750, average score: 0.874)
  Genes in pathway or complex:
             0.9942 0.9774 EG10277 (fabH) FABH-MONOMER (FabH)
             0.7840 0.4973 EG10275 (accB) BCCP-BIOTIN (biotinylated biotin-carboxyl carrier protein)
             0.8530 0.6590 EG10276 (accC) BIOTIN-CARBOXYL-MONOMER (AccC)
             0.6899 0.2219 EG11647 (accA) CARBOXYL-TRANSFERASE-ALPHA-MONOMER (acetyl-CoA carboxyltransferase, α subunit)
             0.6848 0.0018 EG10217 (accD) CARBOXYL-TRANSFERASE-BETA-MONOMER (acetyl-CoA carboxyltransferase, β subunit)
             0.9996 0.9984 EG11317 (fabD) MALONYL-COA-ACP-TRANSACYL-MONOMER (malonyl-CoA-ACP transacylase)
   *in cand* 0.9996 0.9986 EG12606 (fabF) 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
             0.7982 0.1946 EG10274 (fabB) FABB-MONOMER (FabB)
   *in cand* 0.9997 0.9989 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
             0.9151 0.6931 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.8182 0.5176 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.7135 0.0036 EG10273 (fabA) FABA-MONOMER (FabA)
   *in cand* 0.9997 0.9989 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9986 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)

- FASYN-ELONG-PWY (fatty acid elongation -- saturated) (degree of match pw to cand: 0.429, degree of match cand to pw: 0.750, average score: 0.919)
  Genes in pathway or complex:
             0.7135 0.0036 EG10273 (fabA) FABA-MONOMER (FabA)
             0.8182 0.5176 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.9151 0.6931 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
   *in cand* 0.9997 0.9989 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
             0.7982 0.1946 EG10274 (fabB) FABB-MONOMER (FabB)
   *in cand* 0.9996 0.9986 EG12606 (fabF) 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
   *in cand* 0.9997 0.9989 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9986 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)

- PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli)) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.750, average score: 0.885)
  Genes in pathway or complex:
             0.6026 0.2268 EG11542 (tesA) THIOESTERI-MONOMER (TesA)
             0.7982 0.1946 EG10274 (fabB) FABB-MONOMER (FabB)
             0.9151 0.6931 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.7135 0.0036 EG10273 (fabA) FABA-MONOMER (FabA)
             0.8182 0.5176 EG11284 (fabZ) FABZ-MONOMER (FabZ)
   *in cand* 0.9997 0.9989 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
   *in cand* 0.9996 0.9986 EG12606 (fabF) 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
   *in cand* 0.9997 0.9989 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9986 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11318 EG12606 EG50003 (centered at EG50003)
EG10965 (centered at EG10965)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG50003   EG12606   EG11318   EG10965   
413/623409/623411/623416/623
AAEO224324:0:Tyes120-
AAVE397945:0:Tyes1202357
ABAC204669:0:Tyes4280428103539
ABAU360910:0:Tyes120831
ABOR393595:0:Tyes9139149120
ABUT367737:0:Tyes10--
ACAU438753:0:Tyes1205
ACEL351607:0:Tyes--0-
ACRY349163:8:Tyes8182800
ADEH290397:0:Tyes1431421440
AEHR187272:0:Tyes1021016
AFER243159:0:Tyes1021281
AHYD196024:0:Tyes2158215921570
ALAI441768:0:Tyes---0
AMAR234826:0:Tyes-0--
AMAR329726:9:Tyes26251360
AMET293826:0:Tyes-0236
AORE350688:0:Tyes-34320
APHA212042:0:Tyes-720-0
APLE416269:0:Tyes1601-17720
APLE434271:0:Tno1606-17930
ASAL382245:5:Tyes1947194619480
ASP232721:2:Tyes2249224822500
ASP62928:0:Tyes1202353
ASP62977:0:Tyes1-02276
ASP76114:2:Tyes1164116511630
AVAR240292:3:Tyes2177217622930
BABO262698:1:Tno1306
BAMB339670:3:Tno1471481460
BAMB398577:3:Tno1391401380
BAMY326423:0:Tyes4410440417
BANT260799:0:Tno258402585-
BANT261594:2:Tno255502556-
BANT568206:2:Tyes127350-
BANT592021:2:Tno2724027252745
BAPH198804:0:Tyes1-077
BAPH372461:0:Tyes--0-
BBAC264462:0:Tyes102-
BBAC360095:0:Tyes1205
BBRO257310:0:Tyes7957947960
BCAN483179:1:Tno1306
BCEN331271:2:Tno1301311290
BCEN331272:3:Tyes1241251230
BCER226900:1:Tyes261202613-
BCER288681:0:Tno251902520-
BCER315749:1:Tyes1512015131533
BCER405917:1:Tyes244302444-
BCER572264:1:Tno270202703-
BCIC186490:0:Tyes293-2940
BCLA66692:0:Tyes02571-
BFRA272559:1:Tyes10--
BFRA295405:0:Tno10--
BHAL272558:0:Tyes0404122
BHEN283166:0:Tyes1204
BJAP224911:0:Fyes1205
BLIC279010:0:Tyes5650564541
BMAL243160:1:Tno1201368
BMAL320388:1:Tno1619161816200
BMAL320389:1:Tyes102159
BMEL224914:1:Tno6480
BMEL359391:1:Tno1306
BOVI236:1:Tyes1204
BPAR257311:0:Tno2812802820
BPER257313:0:Tyes7727717730
BPET94624:0:Tyes120493
BPSE272560:1:Tyes102131
BPSE320372:1:Tno102149
BPSE320373:1:Tno102150
BPUM315750:0:Tyes4330432409
BQUI283165:0:Tyes1204
BSP107806:2:Tyes1-083
BSP36773:2:Tyes1361371350
BSP376:0:Tyes2306
BSUB:0:Tyes4990498475
BSUI204722:1:Tyes1306
BSUI470137:1:Tno1306
BTHA271848:1:Tno1281291270
BTHE226186:0:Tyes10417-
BTHU281309:1:Tno249602497-
BTHU412694:1:Tno231702318-
BTRI382640:1:Tyes1204
BVIE269482:7:Tyes1271281260
BWEI315730:4:Tyes251402515-
CABO218497:0:Tyes1-0-
CACE272562:1:Tyes29186118620
CAULO:0:Tyes2306
CBEI290402:0:Tyes-1068
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CBOT36826:1:Tno01135113656
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CBOT441772:1:Tno01203120456
CBOT498213:1:Tno01239124060
CBOT508765:1:Tyes-1061
CBOT515621:2:Tyes01174117564
CBOT536232:0:Tno01253125461
CBUR227377:1:Tyes1871881860
CBUR360115:1:Tno1931941920
CBUR434922:2:Tno102197
CCAV227941:1:Tyes1-0-
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CCON360104:2:Tyes-14-0
CCUR360105:0:Tyes-0--
CDES477974:0:Tyes120949
CDIF272563:1:Tyes-201430
CFEL264202:1:Tyes0-1-
CFET360106:0:Tyes-0--
CHOM360107:1:Tyes-0--
CHUT269798:0:Tyes3073060-
CHYD246194:0:Tyes10243
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CJEJ354242:2:Tyes-0--
CJEJ360109:0:Tyes-0--
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CKLU431943:1:Tyes12600--
CMUR243161:1:Tyes0-1-
CNOV386415:0:Tyes1271101300
CPEL335992:0:Tyes0--1
CPER195102:1:Tyes65010679
CPER195103:0:Tno63510663
CPER289380:3:Tyes54510573
CPHY357809:0:Tyes-10-
CPNE115711:1:Tyes0---
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CPNE138677:0:Tno0---
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CSP78:2:Tyes1205
CSUL444179:0:Tyes0---
CTEP194439:0:Tyes120-
CTET212717:0:Tyes-101003
CTRA471472:0:Tyes0-1-
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CVES412965:0:Tyes782960
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DNOD246195:0:Tyes5415425400
DOLE96561:0:Tyes176-1770
DPSY177439:2:Tyes10272
DRAD243230:3:Tyes102-
DRED349161:0:Tyes3653643660
DSHI398580:5:Tyes6656646660
DSP216389:0:Tyes2430241-
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DVUL882:1:Tyes102-
ECAN269484:0:Tyes-0158466
ECAR218491:0:Tyes1781178217800
ECHA205920:0:Tyes-534-0
ECOL199310:0:Tno01-3061
ECOL316407:0:Tno1202535
ECOL331111:6:Tno1202828
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ECOL405955:2:Tyes-202690
ECOL409438:6:Tyes1202818
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EFER585054:1:Tyes1022087
ELIT314225:0:Tyes016801134
ERUM254945:0:Tyes-0186-
ERUM302409:0:Tno-0--
ESP42895:1:Tyes1544154515430
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FNOD381764:0:Tyes0--1088
FNUC190304:0:Tyes2462475900
FPHI484022:1:Tyes102517
FRANT:0:Tno12089
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FTUL351581:0:Tno102219
FTUL393011:0:Tno102198
FTUL393115:0:Tyes12087
FTUL401614:0:Tyes6446456430
FTUL418136:0:Tno102116
FTUL458234:0:Tno102196
GBET391165:0:Tyes4360
GFOR411154:0:Tyes161516160-
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GMET269799:1:Tyes120734
GOXY290633:5:Tyes1043104410420
GSUL243231:0:Tyes120633
GTHE420246:1:Tyes3550354331
GURA351605:0:Tyes1201278
GVIO251221:0:Tyes017261212-
HACI382638:1:Tyes-0--
HARS204773:0:Tyes10249
HAUR316274:2:Tyes4-0-
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HHAL349124:0:Tyes124701248987
HHEP235279:0:Tyes10--
HINF281310:0:Tyes0-11623
HINF374930:0:Tyes1-0141
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HMOD498761:0:Tyes3941380
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HPY:0:Tno-0--
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ILOI283942:0:Tyes0-11066
JSP290400:1:Tyes130823
JSP375286:0:Tyes3233310
KPNE272620:2:Tyes1203314
LACI272621:0:Tyes---0
LBIF355278:2:Tyes0---
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LBOR355276:1:Tyes0--801
LBOR355277:1:Tno438--0
LCAS321967:1:Tyes---0
LCHO395495:0:Tyes102122
LDEL321956:0:Tyes---0
LDEL390333:0:Tyes---0
LGAS324831:0:Tyes---0
LINN272626:1:Tno0388121
LINT189518:0:Tyes0---
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LLAC272622:5:Tyes---0
LLAC272623:0:Tyes---0
LMES203120:1:Tyes---0
LMON169963:0:Tno0400121
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LPNE400673:0:Tno120669
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LWEL386043:0:Tyes0393121
MAER449447:0:Tyes31131222220
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MPET420662:1:Tyes1202071
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MSP400668:0:Tyes1202312
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NSP103690:6:Tyes3267326818000
NSP35761:1:Tyes--0-
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OANT439375:5:Tyes1205
OCAR504832:0:Tyes4360
OIHE221109:0:Tyes3200319297
OTSU357244:0:Fyes-0-238
PAER208963:0:Tyes1203648
PAER208964:0:Tno1022408
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PATL342610:0:Tyes1780177917810
PCAR338963:0:Tyes1581591570
PCRY335284:1:Tyes1174901481
PDIS435591:0:Tyes--0-
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PFLU205922:0:Tyes1021423
PFLU216595:1:Tyes1021253
PFLU220664:0:Tyes1204194
PGIN242619:0:Tyes4534520-
PHAL326442:1:Tyes102990
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PMAR167539:0:Tyes13411342012
PMAR167540:0:Tyes-11810-
PMAR167542:0:Tyes-13080-
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PMAR167555:0:Tyes15731574014
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PPUT160488:0:Tno1203373
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PSP312153:0:Tyes120695
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PSYR223283:2:Tyes3713371237140
PTHE370438:0:Tyes-0-56
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RALB246199:0:Tyes---0
RBEL336407:0:Tyes-0221
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RCAN293613:0:Fyes01-4
RCAS383372:0:Tyes283202829-
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REUT264198:3:Tyes102216
REUT381666:2:Tyes1551155015520
RFEL315456:2:Tyes-207
RFER338969:1:Tyes1201415
RLEG216596:6:Tyes1205
RMAS416276:1:Tyes-0-4
RMET266264:2:Tyes1562156115630
RPAL258594:0:Tyes4350
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RPAL316056:0:Tyes1205
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RPAL316058:0:Tyes1205
RPOM246200:1:Tyes3193163200
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RRIC452659:0:Tyes1207
RRUB269796:1:Tyes12013
RSOL267608:1:Tyes1201138
RSP357808:0:Tyes035833-
RSPH272943:4:Tyes120463
RSPH349101:2:Tno120443
RSPH349102:5:Tyes12035
RTYP257363:0:Tno-204
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SACI56780:0:Tyes10--
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SAUR93062:1:Tno2530251229
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SBAL399599:3:Tyes1414141514130
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SBOY300268:1:Tyes1021673
SCO:2:Fyes--3470
SDEG203122:0:Tyes1202078
SDEN318161:0:Tyes1021171
SDYS300267:1:Tyes1021884
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SENT209261:0:Tno1021972
SENT220341:0:Tno1202568
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SEPI176279:1:Tyes2220221200
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SFLE198214:0:Tyes1202477
SFLE373384:0:Tno1202627
SFUM335543:0:Tyes2066102235
SGLO343509:3:Tyes1201188
SGOR29390:0:Tyes---0
SHAE279808:0:Tyes0293123
SHAL458817:0:Tyes1433143414320
SHIGELLA:0:Tno1202540
SLAC55218:1:Fyes150364
SLOI323850:0:Tyes1201954
SMED366394:3:Tyes12014
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SMUT210007:0:Tyes---0
SONE211586:1:Tyes2380237923810
SPEA398579:0:Tno1021423
SPNE1313:0:Tyes---0
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SPNE171101:0:Tno---0
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SPNE488221:0:Tno---0
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SRUB309807:1:Tyes265226510-
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SSUI391296:0:Tyes---0
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STYP99287:1:Tyes1202528
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TDEN326298:0:Tyes10--
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TROS309801:1:Tyes0-3-
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TTUR377629:0:Tyes1382138313800
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WPIP80849:0:Tyes-408-0
WPIP955:0:Tyes-679-0
WSUC273121:0:Tyes412--0
XAUT78245:1:Tyes1718021
XAXO190486:0:Tyes1202268
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YPES187410:5:Tno1686168716850
YPES214092:3:Tno1500150114990
YPES349746:2:Tno3345334433460
YPES360102:3:Tyes1021596
YPES377628:2:Tno1021816
YPES386656:2:Tno1022039
YPSE273123:2:Tno2479247824800
YPSE349747:2:Tno1516151715150
ZMOB264203:0:Tyes8708698120



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