CANDIDATE ID: 916

CANDIDATE ID: 916

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9944083e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6358 (rihA) (b0651)
   Products of gene:
     - G6358-MONOMER (ribonucleoside hydrolase 1 (pyrimidine-specific))
       Reactions:
        uridine + H2O  ->  D-ribose + uracil
         In pathways
         PWY-6556 (PWY-6556)
         P1-PWY (P1-PWY)

- EG12030 (rihB) (b2162)
   Products of gene:
     - EG12030-MONOMER (ribonucleoside hydrolase 2 (pyrimidine-specific))
       Reactions:
        a pyrimidine nucleoside + H2O  =  D-ribose + a pyrimidine base
         In pathways
         PWY-6556 (PWY-6556)
         P1-PWY (P1-PWY)

- EG11082 (rihC) (b0030)
   Products of gene:
     - EG11082-MONOMER (ribonucleoside hydrolase 3)
       Reactions:
        uridine + H2O  ->  D-ribose + uracil
         In pathways
         PWY-6556 (PWY-6556)
         P1-PWY (P1-PWY)

- EG10818 (rbsK) (b3752)
   Products of gene:
     - RIBOKIN-MONOMER (ribokinase)
     - CPLX0-7647 (ribokinase)
       Reactions:
        D-ribose + ATP  ->  D-ribose-5-phosphate + ADP + 2 H+
         In pathways
         RIBOKIN-PWY (ribose degradation)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 225
Effective number of orgs (counting one per cluster within 468 clusters): 149

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
TROS309801 ncbi Thermomicrobium roseum DSM 51594
TLET416591 ncbi Thermotoga lettingae TMO4
TFUS269800 ncbi Thermobifida fusca YX4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STOK273063 ncbi Sulfolobus tokodaii 74
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B4
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP292414 ncbi Ruegeria sp. TM10404
SSON300269 ncbi Shigella sonnei Ss0464
SSOL273057 ncbi Sulfolobus solfataricus P24
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SAGA211110 ncbi Streptococcus agalactiae NEM3164
SAGA208435 ncbi Streptococcus agalactiae 2603V/R4
SAGA205921 ncbi Streptococcus agalactiae A9094
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6394
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99414
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSP357808 ncbi Roseiflexus sp. RS-14
RSP101510 ncbi Rhodococcus jostii RHA14
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332094
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
RCAS383372 ncbi Roseiflexus castenholzii DSM 139414
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSP117 Pirellula sp.4
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257454
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
PACN267747 ncbi Propionibacterium acnes KPA1712024
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NSP35761 Nocardioides sp.4
NSP103690 ncbi Nostoc sp. PCC 71204
NFAR247156 ncbi Nocardia farcinica IFM 101524
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-14
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra4
MTUB336982 ncbi Mycobacterium tuberculosis F114
MTBRV ncbi Mycobacterium tuberculosis H37Rv4
MTBCDC ncbi Mycobacterium tuberculosis CDC15514
MSP400668 ncbi Marinomonas sp. MWYL14
MSP189918 ncbi Mycobacterium sp. KMS4
MSP164757 ncbi Mycobacterium sp. JLS4
MSP164756 ncbi Mycobacterium sp. MCS4
MSME246196 ncbi Mycobacterium smegmatis MC2 1554
MSED399549 ncbi Metallosphaera sedula DSM 53484
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P24
MBOV233413 ncbi Mycobacterium bovis AF2122/974
MAVI243243 ncbi Mycobacterium avium 1044
MABS561007 ncbi Mycobacterium abscessus ATCC 199774
LSPH444177 ncbi Lysinibacillus sphaericus C3-413
LSAK314315 ncbi Lactobacillus sakei sakei 23K4
LREU557436 ncbi Lactobacillus reuteri DSM 200164
LPLA220668 ncbi Lactobacillus plantarum WCFS14
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82934
LJOH257314 ncbi Lactobacillus johnsonii NCC 5334
LHEL405566 ncbi Lactobacillus helveticus DPC 45714
LGAS324831 ncbi Lactobacillus gasseri ATCC 333234
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118424
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3654
LBRE387344 ncbi Lactobacillus brevis ATCC 3674
LACI272621 ncbi Lactobacillus acidophilus NCFM4
KRAD266940 ncbi Kineococcus radiotolerans SRS302164
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP290400 ncbi Jannaschia sp. CCS14
HWAL362976 ncbi Haloquadratum walsbyi DSM 167903
HNEP81032 Hyphomonas neptunium4
HMAR272569 ncbi Haloarcula marismortui ATCC 430493
HCHE349521 ncbi Hahella chejuensis KCTC 23964
GOXY290633 ncbi Gluconobacter oxydans 621H4
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FMAG334413 ncbi Finegoldia magna ATCC 293284
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRAD243230 ncbi Deinococcus radiodurans R14
DGEO319795 ncbi Deinococcus geothermalis DSM 113004
CTET212717 ncbi Clostridium tetani E884
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPHY357809 ncbi Clostridium phytofermentans ISDg4
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3824
CMIC31964 ncbi Clavibacter michiganensis sepedonicus4
CJEI306537 ncbi Corynebacterium jeikeium K4114
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130324
CEFF196164 ncbi Corynebacterium efficiens YS-3144
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131294
CDIF272563 ncbi Clostridium difficile 6304
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CAULO ncbi Caulobacter crescentus CB154
BXEN266265 ncbi Burkholderia xenovorans LB4004
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSP36773 Burkholderia sp.4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BLON206672 ncbi Bifidobacterium longum NCC27054
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP62977 ncbi Acinetobacter sp. ADP14
ASP1667 Arthrobacter sp.4
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
ALAI441768 ncbi Acholeplasma laidlawii PG-8A4
AHYD196024 Aeromonas hydrophila dhakensis4
ACEL351607 ncbi Acidothermus cellulolyticus 11B4
AAUR290340 ncbi Arthrobacter aurescens TC14


Names of the homologs of the genes in the group in each of these orgs
  G6358   EG12030   EG11082   EG10818   
YENT393305 YE3590YE3590YE3590YE0012
XORY360094 XOOORF_4197XOOORF_4197XOOORF_4197XOOORF_1122
XORY342109 XOO1049XOO1049XOO1049XOO3565
XORY291331 XOO1152XOO1152XOO1152XOO3785
XCAM487884 XCC-B100_0948XCC-B100_0948XCC-B100_0948XCC-B100_3589
XCAM316273 XCAORF_3577XCAORF_3577XCAORF_3577XCAORF_0942
XCAM314565 XC_0946XC_0946XC_0946XC_3468
XCAM190485 XCC3237XCC3237XCC3237XCC0764
XAXO190486 XAC3390XAC3390XAC3390XAC0818
TROS309801 TRD_1029TRD_1029TRD_1029TRD_0704
TLET416591 TLET_1017TLET_1017TLET_1017TLET_1905
TFUS269800 TFU_2581TFU_2581TFU_2581TFU_0259
STYP99287 STM0661STM0661STM0051STM3885
STOK273063 ST0803ST0803ST0803ST2328
SSP94122 SHEWANA3_3476SHEWANA3_3476SHEWANA3_3476SHEWANA3_3477
SSP644076 SCH4B_4322SCH4B_4322SCH4B_4322SCH4B_3202
SSP321332 CYB_0491CYB_0491CYB_0491CYB_1353
SSP321327 CYA_1903CYA_1903CYA_1903CYA_2257
SSP292414 TM1040_0934TM1040_0934TM1040_0225TM1040_2878
SSON300269 SSO_0605SSO_2218SSO_0035SSO_3922
SSOL273057 SSO0505SSO0505SSO0505SSO0004
SSED425104 SSED_1049SSED_1049SSED_1049SSED_1048
SSAP342451 SSP0287SSP0287SSP1735SSP0744
SPRO399741 SPRO_1210SPRO_4396SPRO_1210SPRO_4897
SPEA398579 SPEA_1863SPEA_1863SPEA_1863SPEA_0518
SONE211586 SO_0811SO_0811SO_0811SO_0810
SMEL266834 SMC01105SMC01105SMC01105SMC01103
SMED366394 SMED_0050SMED_0050SMED_0050SMED_0052
SLOI323850 SHEW_0697SHEW_0697SHEW_0697SHEW_0696
SLAC55218 SL1157_2621SL1157_2621SL1157_2621SL1157_1099
SHIGELLA YBEKYEIKYAAFRBSK
SHAL458817 SHAL_2421SHAL_2421SHAL_2421SHAL_0582
SHAE279808 SH1905SH1905SH1905SH0175
SFLE373384 SFV_0675SFV_2237SFV_0024SFV_3747
SFLE198214 AAN42267.1AAN43766.1AAN41693.1AAN45273.1
SERY405948 SACE_1231SACE_1231SACE_1231SACE_1271
SEPI176280 SE_0755SE_0755SE_0755SE_2086
SEPI176279 SERP0642SERP0642SERP0642SERP2100
SENT454169 SEHA_C0778SEHA_C0778SEHA_C0055SEHA_C4218
SENT321314 SCH_0689SCH_0689SCH_0045SCH_3798
SENT295319 SPA2079SPA2079SPA0052SPA3724
SENT220341 STY0706STY0706STY0060STY3892
SENT209261 T2212T2212T0053T3634
SDYS300267 SDY_0052SDY_2104SDY_0052SDY_3995
SDEN318161 SDEN_0940SDEN_0940SDEN_0940SDEN_0939
SCO SCO3779SCO3779SCO3779SCO2748
SBOY300268 SBO_0514SBO_2165SBO_0029SBO_3766
SBAL402882 SHEW185_3647SHEW185_3647SHEW185_3647SHEW185_3648
SBAL399599 SBAL195_3770SBAL195_3770SBAL195_3770SBAL195_3771
SAUR93062 SACOL0225SACOL0225SACOL0225SACOL0253
SAUR93061 SAOUHSC_00211SAOUHSC_00211SAOUHSC_00211SAOUHSC_00239
SAUR426430 NWMN_0178NWMN_0178NWMN_0178NWMN_0202
SAUR418127 SAHV_0242SAHV_0242SAHV_0242SAHV_0267
SAUR367830 SAUSA300_0237SAUSA300_0237SAUSA300_0237SAUSA300_0262
SAUR359787 SAURJH1_0234SAURJH1_0234SAURJH1_0234SAURJH1_0259
SAUR359786 SAURJH9_0228SAURJH9_0228SAURJH9_0228SAURJH9_0253
SAUR282459 SAS0219SAS0219SAS0219SAS0245
SAUR282458 SAR0236SAR0236SAR0236SAR0266
SAUR273036 SAB0182SAB0182SAB0182SAB0208C
SAUR196620 MW0219MW0219MW0219MW0244
SAUR158879 SA0234SA0234SA0234SA0258
SAUR158878 SAV0243SAV0243SAV0243SAV0268
SAGA211110 GBS0574GBS0574GBS0574GBS0117
SAGA208435 SAG_0528SAG_0528SAG_0528SAG_0118
SAGA205921 SAK_0679SAK_0679SAK_0679SAK_0170
SACI330779 SACI_1187SACI_0047SACI_1187SACI_0272
RXYL266117 RXYL_1896RXYL_1896RXYL_1896RXYL_0949
RSPH349102 RSPH17025_1107RSPH17025_1107RSPH17025_1107RSPH17025_3350
RSPH349101 RSPH17029_1558RSPH17029_1558RSPH17029_1558RSPH17029_3470
RSPH272943 RSP_2914RSP_2914RSP_2914RSP_3738
RSP357808 ROSERS_2633ROSERS_2633ROSERS_2633ROSERS_3280
RSP101510 RHA1_RO07236RHA1_RO07236RHA1_RO07236RHA1_RO01303
RSOL267608 RSC2548RSC2548RSC2548RSC1013
RSAL288705 RSAL33209_3202RSAL33209_3202RSAL33209_3202RSAL33209_3205
RPOM246200 SPO_2470SPO_2470SPO_2470SPO_0013
RLEG216596 RL0383RL0383RL0383RL2747
RETL347834 RHE_CH00366RHE_CH00366RHE_CH00366RHE_PC00098
RDEN375451 RD1_3134RD1_3134RD1_3134RD1_3737
RCAS383372 RCAS_3042RCAS_3042RCAS_3042RCAS_3765
PSYR223283 PSPTO_2373PSPTO_2373PSPTO_2373PSPTO_2371
PSYR205918 PSYR_2157PSYR_2157PSYR_2157PSYR_2155
PSP117 RB417RB417RB417RB3499
PPUT76869 PPUTGB1_3486PPUTGB1_3486PPUTGB1_3486PPUTGB1_3488
PPUT351746 PPUT_3230PPUT_3230PPUT_3230PPUT_3232
PPUT160488 PP_2460PP_2460PP_2460PP_2458
PPRO298386 PBPRA2062PBPRA2062PBPRA2062PBPRB1560
PPEN278197 PEPE_1726PEPE_1726PEPE_1726PEPE_1699
PMUL272843 PM1767PM1767PM1767PM0152
PLUM243265 PLU4289PLU4289PLU4289PLU0059
PFLU220664 PFL_2107PFL_2107PFL_2107PFL_2105
PFLU216595 PFLU4154PFLU4154PFLU4154PFLU4156
PFLU205922 PFL_1925PFL_1925PFL_1925PFL_1923
PENT384676 PSEEN1958PSEEN1958PSEEN1958PSEEN1956
PATL342610 PATL_3506PATL_3506PATL_3506PATL_3505
PAER208964 PA0143PA0143PA0143PA1950
PAER208963 PA14_01760PA14_01760PA14_01760PA14_39280
PACN267747 PPA2076PPA2076PPA2076PPA1211
OIHE221109 OB2433OB2433OB2433OB2576
OANT439375 OANT_4446OANT_4446OANT_4446OANT_4447
NSP35761 NOCA_0542NOCA_0542NOCA_0542NOCA_0545
NSP103690 ALR3202ALR3202ALR3202ALL1784
NFAR247156 NFA25490NFA25490NFA25490NFA13700
MVAN350058 MVAN_1526MVAN_1526MVAN_1526MVAN_3935
MTUB419947 MRA_3432MRA_3432MRA_3432MRA_2462
MTUB336982 TBFG_13427TBFG_13427TBFG_13427TBFG_12463
MTBRV RV3393RV3393RV3393RV2436
MTBCDC MT3500MT3500MT3500MT2511
MSP400668 MMWYL1_1535MMWYL1_1535MMWYL1_1535MMWYL1_1534
MSP189918 MKMS_1195MKMS_1195MKMS_1195MKMS_3612
MSP164757 MJLS_1205MJLS_1205MJLS_1205MJLS_3544
MSP164756 MMCS_1178MMCS_1178MMCS_1178MMCS_3539
MSME246196 MSMEG_1621MSMEG_1621MSMEG_1621MSMEG_4585
MSED399549 MSED_1006MSED_0768MSED_1006MSED_0185
MLOT266835 MLL3190MLR2009MLL3190MLR8492
MGIL350054 MFLV_4897MFLV_4897MFLV_4897MFLV_2643
MBOV410289 BCG_3462BCG_3462BCG_3462BCG_2455
MBOV233413 MB3425MB3425MB3425MB2462
MAVI243243 MAV_4342MAV_4342MAV_4342MAV_0347
MABS561007 MAB_3711MAB_3711MAB_3711MAB_1617C
LSPH444177 BSPH_2870BSPH_2870BSPH_3382
LSAK314315 LSA0252LSA0252LSA0252LSA0202
LREU557436 LREU_0877LREU_0877LREU_0102LREU_0404
LPLA220668 LP_3615LP_0363LP_0363LP_3660
LMES203120 LEUM_0797LEUM_0797LEUM_0344LEUM_0691
LJOH257314 LJ_0799LJ_0799LJ_0799LJ_0797
LHEL405566 LHV_0614LHV_0614LHV_0614LHV_0611
LGAS324831 LGAS_0558LGAS_0558LGAS_0558LGAS_0556
LDEL390333 LDB0532LDB0532LDB0532LDB0529
LDEL321956 LBUL_0473LBUL_0473LBUL_0473LBUL_0470
LBRE387344 LVIS_2188LVIS_2188LVIS_2069LVIS_1421
LACI272621 LBA0591LBA0591LBA0591LBA0587
KRAD266940 KRAD_1901KRAD_1901KRAD_1901KRAD_0983
KPNE272620 GKPORF_B1007GKPORF_B1007GKPORF_B4290GKPORF_B3499
JSP290400 JANN_1804JANN_1804JANN_1804JANN_2121
HWAL362976 HQ2498AHQ2498AHQ2498A
HNEP81032 HNE_0208HNE_0208HNE_0208HNE_0207
HMAR272569 RRNAC3031RRNAC3031RRNAC3031
HCHE349521 HCH_02314HCH_02314HCH_02314HCH_02313
GOXY290633 GOX0947GOX0947GOX0947GOX2084
GBET391165 GBCGDNIH1_1340GBCGDNIH1_1340GBCGDNIH1_1340GBCGDNIH1_1810
FMAG334413 FMG_1442FMG_1442FMG_1442FMG_1548
ESP42895 ENT638_1178ENT638_1178ENT638_1178ENT638_4112
EFER585054 EFER_2452EFER_2248EFER_0023EFER_4051
EFAE226185 EF_1921EF_1921EF_1921EF_2961
ECOO157 YBEKYEIKYAAFRBSK
ECOL83334 ECS0690ECS3054ECS0033ECS4694
ECOL585397 ECED1_0641ECED1_2610ECED1_0027ECED1_4442
ECOL585057 ECIAI39_0619ECIAI39_2302ECIAI39_0031ECIAI39_4357
ECOL585056 ECUMN_0745ECUMN_2498ECUMN_0031ECUMN_4282
ECOL585055 EC55989_0645EC55989_2415EC55989_0029EC55989_4227
ECOL585035 ECS88_0686ECS88_2310ECS88_0029ECS88_4174
ECOL585034 ECIAI1_0635ECIAI1_2242ECIAI1_0031ECIAI1_3936
ECOL481805 ECOLC_2994ECOLC_1486ECOLC_2994ECOLC_4242
ECOL469008 ECBD_3002ECBD_1496ECBD_3586ECBD_4278
ECOL439855 ECSMS35_0672ECSMS35_2309ECSMS35_0028ECSMS35_4120
ECOL413997 ECB_00617ECB_02091ECB_00034ECB_03638
ECOL409438 ECSE_0721ECSE_2430ECSE_0028ECSE_4042
ECOL405955 APECO1_1412APECO1_43912APECO1_1953APECO1_2711
ECOL364106 UTI89_C0647UTI89_C2436UTI89_C0032UTI89_C4307
ECOL362663 ECP_0674ECP_2202ECP_0028ECP_3952
ECOL331111 ECE24377A_0679ECE24377A_2459ECE24377A_0030ECE24377A_4268
ECOL316407 ECK0644:JW0646:B0651ECK2155:JW2149:B2162ECK0031:JW0028:B0030ECK3746:JW3731:B3752
ECOL199310 C0735C2696C0735C4680
ECAR218491 ECA4423ECA4424ECA4424ECA0014
DSHI398580 DSHI_1158DSHI_1158DSHI_1158DSHI_1976
DRAD243230 DR_0403DR_0403DR_0403DR_A0055
DGEO319795 DGEO_1652DGEO_1652DGEO_1652DGEO_1072
CTET212717 CTC_00577CTC_00577CTC_00577CTC_00909
CSP78 CAUL_3716CAUL_3716CAUL_3716CAUL_1363
CSP501479 CSE45_1884CSE45_1884CSE45_1884CSE45_3410
CSAL290398 CSAL_1840CSAL_1840CSAL_1840CSAL_1841
CPHY357809 CPHY_1819CPHY_1819CPHY_1819CPHY_1818
CPER289380 CPR_1971CPR_1971CPR_1971CPR_1603
CPER195103 CPF_2260CPF_2260CPF_2260CPF_1884
CPER195102 CPE2003CPE2003CPE2003CPE1632
CMIC443906 CMM_0982CMM_0982CMM_0982CMM_0942
CMIC31964 CMS2856CMS2856CMS2856CMS0201
CJEI306537 JK2078JK2078JK2078JK2077
CGLU196627 CG1543CG1543CG1543CG1546
CEFF196164 CE1482CE1482CE1482CE1484
CDIP257309 DIP1753DIP1753DIP1753DIP0655
CDIF272563 CD1682CD1682CD1682CD0299
CBOT508765 CLL_A3021CLL_A3021CLL_A3021CLL_A1527
CAULO CC2615CC2615CC2615CC0950
BXEN266265 BXE_B0742BXE_B0742BXE_B0742BXE_B0576
BWEI315730 BCERKBAB4_2467BCERKBAB4_2467BCERKBAB4_2467BCERKBAB4_0579
BTHU412694 BALH_2595BALH_3191BALH_3191BALH_0607
BTHU281309 BT9727_2642BT9727_3310BT9727_3310BT9727_0576
BTHA271848 BTH_II1555BTH_II1555BTH_II1555BTH_I2471
BSUI470137 BSUIS_B0008BSUIS_B0008BSUIS_B0008BSUIS_B0007
BSUI204722 BR_A0006BR_A0006BR_A0006BR_A0005
BSP36773 BCEP18194_B0386BCEP18194_B0386BCEP18194_B0386BCEP18194_C7623
BPUM315750 BPUM_3604BPUM_3604BPUM_3604BPUM_3264
BPSE320373 BURPS668_A1256BURPS668_A1256BURPS668_A1256BURPS668_1858
BPSE320372 BURPS1710B_B2879BURPS1710B_B2879BURPS1710B_B2879BURPS1710B_A2184
BPSE272560 BPSS0852BPSS0852BPSS0852BPSL1830
BOVI236 GBOORFA0004GBOORFA0004GBOORFA0004
BMEL359391 BAB2_0005BAB2_0005BAB2_0005BAB2_0004
BMEL224914 BMEII0088BMEII0088BMEII0088BMEII0089
BLON206672 BL1770BL1770BL1770BL1431
BHAL272558 BH0417BH0417BH0417BH3728
BCLA66692 ABC3205ABC3205ABC3205ABC3548
BCER572264 BCA_2968BCA_3645BCA_3645BCA_0703
BCER405917 BCE_2927BCE_A0076BCE_3566BCE_0733
BCER315749 BCER98_2226BCER98_2226BCER98_2226BCER98_0560
BCER288681 BCE33L2619BCE33L2619BCE33L3260BCE33L0575
BCER226900 BC_2683BC_2683BC_2683BC_0660
BCEN331272 BCEN2424_5263BCEN2424_5263BCEN2424_5263BCEN2424_6126
BCEN331271 BCEN_3104BCEN_3104BCEN_3104BCEN_5761
BCAN483179 BCAN_B0008BCAN_B0008BCAN_B0008BCAN_B0007
BANT592021 BAA_2947BAA_3635BAA_3635BAA_0749
BANT568206 BAMEG_1711BAMEG_1024BAMEG_1024BAMEG_3921
BANT261594 GBAA2888GBAA3606GBAA3606GBAA0665
BANT260799 BAS2693BAS3345BAS3345BAS0632
BAMB398577 BAMMC406_5150BAMMC406_5150BAMMC406_5150BAMMC406_1383
BAMB339670 BAMB_4624BAMB_4624BAMB_4624BAMB_1343
BABO262698 BRUAB2_0006BRUAB2_0006BRUAB2_0006BRUAB2_0005
AVAR240292 AVA_3900AVA_3900AVA_3900AVA_0252
ASP62977 ACIAD2386ACIAD2386ACIAD2386ACIAD2392
ASP1667 ARTH_0081ARTH_0081ARTH_0081ARTH_0083
ASAL382245 ASA_2899ASA_2899ASA_2899ASA_1967
ALAI441768 ACL_1373ACL_1373ACL_1373ACL_1374
AHYD196024 AHA_1466AHA_1466AHA_1466AHA_2313
ACEL351607 ACEL_1475ACEL_1475ACEL_1475ACEL_0624
AAUR290340 AAUR_3646AAUR_3646AAUR_3646AAUR_3648


Organism features enriched in list (features available for 209 out of the 225 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 5.699e-71617
Arrangment:Pairs 1.465e-968112
Disease:Brucellosis 0.005740255
Disease:Dysentery 0.002026066
Disease:Opportunistic_infections 0.005740255
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00001061111
GC_Content_Range4:0-40 9.195e-653213
GC_Content_Range4:60-100 1.094e-676145
GC_Content_Range7:0-30 0.0001823647
GC_Content_Range7:30-40 0.004251347166
GC_Content_Range7:40-50 0.000823228117
GC_Content_Range7:50-60 0.000968652107
GC_Content_Range7:60-70 0.000010169134
Genome_Size_Range5:0-2 2.682e-2210155
Genome_Size_Range5:4-6 7.184e-1099184
Genome_Size_Range5:6-10 9.920e-83447
Genome_Size_Range9:1-2 3.878e-1610128
Genome_Size_Range9:4-5 0.00797614496
Genome_Size_Range9:5-6 2.181e-85588
Genome_Size_Range9:6-8 2.158e-83038
Gram_Stain:Gram_Neg 0.0019325104333
Gram_Stain:Gram_Pos 1.298e-1290150
Habitat:Aquatic 0.00002151691
Habitat:Multiple 0.000128283178
Optimal_temp.:25-35 0.00014281214
Optimal_temp.:30-37 0.00003461518
Oxygen_Req:Aerobic 0.001885981185
Oxygen_Req:Anaerobic 3.781e-1011102
Oxygen_Req:Facultative 2.237e-7100201
Shape:Irregular_coccus 0.0045829117
Shape:Rod 3.451e-10159347
Temp._range:Mesophilic 0.0002084185473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 397
Effective number of orgs (counting one per cluster within 468 clusters): 319

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317581
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329531
YPES386656 ncbi Yersinia pestis Pestoides F1
YPES377628 ncbi Yersinia pestis Nepal5161
YPES360102 ncbi Yersinia pestis Antiqua1
YPES349746 ncbi Yersinia pestis Angola1
YPES214092 ncbi Yersinia pestis CO921
YPES187410 ncbi Yersinia pestis KIM 101
XFAS405440 ncbi Xylella fastidiosa M121
XFAS183190 ncbi Xylella fastidiosa Temecula11
XFAS160492 ncbi Xylella fastidiosa 9a5c1
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP61
VVUL196600 ncbi Vibrio vulnificus YJ0161
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106331
VFIS312309 ncbi Vibrio fischeri ES1141
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
VCHO345073 ncbi Vibrio cholerae O3951
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169611
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.1
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4401
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148631
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEG203122 ncbi Saccharophagus degradans 2-400
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SARE391037 ncbi Salinispora arenicola CNS-2051
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111701
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H160
REUT264198 ncbi Ralstonia eutropha JMP1340
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6661
PRUM264731 ncbi Prevotella ruminicola 230
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ951
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 371
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM21
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E1
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.1
MSP266779 ncbi Chelativorans sp. BNC11
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MFLA265072 ncbi Methylobacillus flagellatus KT1
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HINF71421 ncbi Haemophilus influenzae Rd KW201
HINF374930 ncbi Haemophilus influenzae PittEE1
HINF281310 ncbi Haemophilus influenzae 86-028NP1
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
GURA351605 ncbi Geobacter uraniireducens Rf40
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1121
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-11
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124721
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BVIE269482 ncbi Burkholderia vietnamiensis G41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BSUB ncbi Bacillus subtilis subtilis 1681
BSP376 Bradyrhizobium sp.1
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BMAL320389 ncbi Burkholderia mallei NCTC 102470
BMAL320388 ncbi Burkholderia mallei SAVP10
BMAL243160 ncbi Burkholderia mallei ATCC 233440
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG11
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-11
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G6358   EG12030   EG11082   EG10818   
ZMOB264203
YPSE349747 YPSIP31758_0008
YPSE273123 YPTB0008
YPES386656 YPDSF_0228
YPES377628 YPN_0008
YPES360102 YPA_0011
YPES349746 YPANGOLA_A0008
YPES214092 YPO0008
YPES187410 Y0008
XFAS405440 XFASM12_1863
XFAS183190 PD_1698
XFAS160492 XF0366
XAUT78245
WSUC273121
WPIP955
WPIP80849
VVUL216895 VV2_0065
VVUL196600 VVA0572
VPAR223926 VPA1083
VFIS312309 VF1448
VEIS391735 VEIS_2130
VCHO345073 VC0395_0007
VCHO VCA0131
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TTEN273068 TTE0202
TSP28240
TSP1755 TETH514_0162
TPSE340099 TETH39_2042
TPET390874 TPET_1789
TPEN368408 TPEN_1649
TPAL243276
TMAR243274 TM_0960
TKOD69014
TERY203124 TERY_0865
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025
TACI273075
SWOL335541
STRO369723 STROP_1202
STHE322159
STHE299768
STHE292459 STH771
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP1148
SSP1131
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SGOR29390
SGLO343509
SFUM335543
SELO269084
SDEG203122
SAVE227882 SAV5317
SARE391037 SARE_1094
SALA317655
SACI56780
RTYP257363
RRUB269796 RRU_A2297
RRIC452659
RRIC392021
RPRO272947
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RFER338969
RFEL315456
REUT381666
REUT264198
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811
PSP312153
PSP296591 BPRO_2205
PRUM264731
PNAP365044
PMOB403833 PMOB_0924
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616 PISL_1117
PINT246198
PING357804 PING_0344
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PDIS435591 BDI_1657
PCRY335284
PCAR338963
PAST100379
PARS340102 PARS_0078
PARC259536
PAER178306 PAE0835
PABY272844
OTSU357244
OCAR504832
NWIN323098
NSP387092
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
NARO279238
MXAN246197
MTHE349307
MTHE264732
MTHE187420
MSYN262723
MSUC221988 MS0283
MSTA339860
MSP409 M446_3132
MSP266779 MESO_3570
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311 MFL642
MFLA265072 MFLA_2300
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBAR269797
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
LXYL281090 LXX17050
LWEL386043
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMON265669
LMON169963
LLAC272623 L86157
LLAC272622 LACR_1802
LINT363253
LINT267671
LINT189518
LINN272626
LCHO395495
LCAS321967 LSEI_0312
LBOR355277
LBOR355276
LBIF456481
LBIF355278
JSP375286
ILOI283942
IHOS453591
HSP64091
HSOM228400 HSM_0093
HSOM205914 HS_0225
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMOD498761 HM1_2416
HINF71421 HI_0505
HINF374930 CGSHIEE_00465
HINF281310 NTHI0633
HHEP235279
HHAL349124
HDUC233412
HBUT415426
HAUR316274
HARS204773
HACI382638
GVIO251221 GLL2315
GURA351605
GTHE420246 GTNG_3174
GSUL243231
GMET269799
GKAU235909 GK3230
GFOR411154
FTUL458234
FTUL418136
FTUL401614 FTN_1767
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022 FPHI_0829
FNUC190304
FNOD381764
FJOH376686
FALN326424 FRAAL3962
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DRED349161 DRED_2526
DPSY177439 DP1974
DOLE96561
DNOD246195
DHAF138119
DETH243164
DDES207559
DARO159087
CVIO243365 CV_3020
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CNOV386415 NT01CX_0166
CMUR243161
CMET456442
CMAQ397948
CKOR374847 KCR_1208
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJAP155077
CHYD246194
CHUT269798
CHOM360107
CFET360106
CFEL264202
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232 CLM_1805
CBOT515621 CLJ_B1671
CBOT498213 CLD_2988
CBOT441772 CLI_1646
CBOT441771 CLC_1595
CBOT441770 CLB_1584
CBOT36826 CBO1564
CBLO291272
CBLO203907
CBEI290402 CBEI_4076
CACE272562
CABO218497
BVIE269482 BCEP1808_1423
BTUR314724
BTRI382640
BTHE226186 BT_2803
BSUB BSU35920
BSP376 BRADO2492
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BMAL320389
BMAL320388
BMAL243160
BLIC279010 BL02439
BJAP224911 BLR1892
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAMY326423 RBAM_033090
BAFZ390236
AYEL322098
AURANTIMONAS
ASP76114
ASP62928
ASP232721
APLE434271 APJL_1704
APLE416269 APL_1673
APHA212042
APER272557
AORE350688
ANAE240017 ANA_1770
AMET293826
AMAR329726
AMAR234826
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACRY349163 ACRY_2877
ACAU438753
ABUT367737
ABOR393595
ABAU360910
ABAC204669
AAVE397945 AAVE_4200
AAEO224324


Organism features enriched in list (features available for 373 out of the 397 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 6.153e-7117
Arrangment:Pairs 5.245e-1043112
Disease:Wide_range_of_infections 0.00696651111
GC_Content_Range4:0-40 7.037e-6160213
GC_Content_Range4:60-100 1.398e-669145
GC_Content_Range7:0-30 0.00016704147
GC_Content_Range7:30-40 0.0037345119166
GC_Content_Range7:40-50 0.000723989117
GC_Content_Range7:50-60 0.000564454107
GC_Content_Range7:60-70 0.000012465134
Genome_Size_Range5:0-2 1.724e-22145155
Genome_Size_Range5:4-6 3.429e-1084184
Genome_Size_Range5:6-10 1.143e-71347
Genome_Size_Range9:0-1 4.073e-62727
Genome_Size_Range9:1-2 2.787e-16118128
Genome_Size_Range9:4-5 0.00517525196
Genome_Size_Range9:5-6 2.694e-83388
Genome_Size_Range9:6-8 2.464e-8838
Gram_Stain:Gram_Neg 0.0023665228333
Gram_Stain:Gram_Pos 1.908e-1260150
Habitat:Aquatic 0.00001867591
Habitat:Multiple 0.000158195178
Optimal_temp.:25-35 0.0001506214
Optimal_temp.:30-37 0.0000369318
Optimal_temp.:35-37 0.00278741313
Optimal_temp.:37 0.008247558106
Oxygen_Req:Aerobic 0.0022164104185
Oxygen_Req:Anaerobic 3.019e-1091102
Oxygen_Req:Facultative 1.256e-7100201
Oxygen_Req:Microaerophilic 0.00027721818
Shape:Irregular_coccus 0.00440791617
Shape:Rod 2.277e-10187347
Shape:Sphere 0.00017421919
Shape:Spiral 1.438e-73434
Temp._range:Hyperthermophilic 0.00995882023
Temp._range:Mesophilic 0.0001812287473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
RIBOKIN-PWY (ribose degradation)2791920.6131
IDNCAT-PWY (L-idonate degradation)2461520.4317
GALACTCAT-PWY (D-galactonate degradation)104830.4072
GLUAMCAT-PWY (N-acetylglucosamine degradation I)3561880.4013



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12030   EG11082   EG10818   
G63580.9999250.999920.998957
EG120300.9999110.998954
EG110820.998978
EG10818



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PAIRWISE BLAST SCORES:

  G6358   EG12030   EG11082   EG10818   
G63580.0f01.6e-579.1e-57-
EG120301.6e-570.0f02.4e-47-
EG110825.9e-532.9e-440.0f0-
EG10818---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6358 (centered at G6358)
EG12030 (centered at EG12030)
EG11082 (centered at EG11082)
EG10818 (centered at EG10818)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6358   EG12030   EG11082   EG10818   
226/623226/623225/623306/623
AAUR290340:2:Tyes0002
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