CANDIDATE ID: 931

CANDIDATE ID: 931

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9957567e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7458 (amiC) (b2817)
   Products of gene:
     - G7458-MONOMER (N-acetylmuramyl-L-alanine amidase)
       Reactions:
        a peptidoglycan + H2O  =  N-acetylmuramate + a peptide

- EG11823 (amiA) (b2435)
   Products of gene:
     - NACMURLALAAMI1-MONOMER (N-acetylmuramoyl-L-alanine amidase 1)
       Reactions:
        a peptidoglycan + H2O  =  N-acetylmuramate + a peptide

- EG11363 (amiB) (b4169)
   Products of gene:
     - NACMURLALAAMI2-MONOMER (N-acetylmuramoyl-L-alanine amidase 2)
       Reactions:
        a peptidoglycan + H2O  =  N-acetylmuramate + a peptide

- EG10748 (mrcA) (b3396)
   Products of gene:
     - EG10748-MONOMER (peptidoglycan synthetase; penicillin-binding protein 1A)
     - CPLX0-7717 (penicillin-binding protein 1A)
       Reactions:
        peptidoglycan D-alanyl-DAP crosslink + H2O  =  peptidoglycan tetrapeptide, glycan chain 2 + peptidoglycan tetrapeptide, glycan chain 1
        2 N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine  ->  a peptidoglycan dimer (meso-diaminopimelate containing) + di-trans,poly-cis-undecaprenyl diphosphate + H+
         In pathways
         PEPTIDOGLYCANSYN-PWY (peptidoglycan biosynthesis I (meso-diaminopimelate containing))



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 291
Effective number of orgs (counting one per cluster within 468 clusters): 216

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py24
WSUC273121 ncbi Wolinella succinogenes DSM 17404
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12514
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B4
SSP387093 ncbi Sulfurovum sp. NBC37-14
SSP292414 ncbi Ruegeria sp. TM10404
SSP1148 ncbi Synechocystis sp. PCC 68034
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SRUB309807 ncbi Salinibacter ruber DSM 138553
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63013
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
PTHE370438 ncbi Pelotomaculum thermopropionicum SI3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUT319225 ncbi Chlorobium luteolum DSM 2734
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PGIN242619 ncbi Porphyromonas gingivalis W833
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PDIS435591 ncbi Parabacteroides distasonis ATCC 85033
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP387092 ncbi Nitratiruptor sp. SB155-24
NSP103690 ncbi Nostoc sp. PCC 71204
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16224
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
MAER449447 ncbi Microcystis aeruginosa NIES-8434
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LCHO395495 ncbi Leptothrix cholodnii SP-64
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS13
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HNEP81032 Hyphomonas neptunium4
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE3
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHEP235279 ncbi Helicobacter hepaticus ATCC 514493
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf44
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-154
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S853
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255863
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough3
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-14
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DNOD246195 ncbi Dichelobacter nodosus VCS1703A3
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CTEP194439 ncbi Chlorobium tepidum TLS4
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CMUR243161 ncbi Chlamydia muridarum Nigg3
CJEJ407148 ncbi Campylobacter jejuni jejuni 811164
CJEJ360109 ncbi Campylobacter jejuni doylei 269.974
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1764
CJEJ195099 ncbi Campylobacter jejuni RM12214
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111684
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334064
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3814
CFET360106 ncbi Campylobacter fetus fetus 82-404
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CCUR360105 ncbi Campylobacter curvus 525.924
CCON360104 ncbi Campylobacter concisus 138264
CCHL340177 ncbi Chlorobium chlorochromatii CaD34
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CAULO ncbi Caulobacter crescentus CB154
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54823
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1683
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)3
BQUI283165 ncbi Bartonella quintana Toulouse4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-14
BFRA295405 ncbi Bacteroides fragilis YCH463
BFRA272559 ncbi Bacteroides fragilis NCTC 93433
BCLA66692 ncbi Bacillus clausii KSM-K164
BCIC186490 Candidatus Baumannia cicadellinicola3
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5834
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1004
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)3
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AMAR329726 ncbi Acaryochloris marina MBIC110173
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABUT367737 ncbi Arcobacter butzleri RM40184
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAEO224324 ncbi Aquifex aeolicus VF54


Names of the homologs of the genes in the group in each of these orgs
  G7458   EG11823   EG11363   EG10748   
ZMOB264203 ZMO0195ZMO0195ZMO0195ZMO0197
YPSE349747 YPSIP31758_0994YPSIP31758_0994YPSIP31758_3656YPSIP31758_3972
YPSE273123 YPTB3022YPTB3022YPTB0422YPTB3756
YPES386656 YPDSF_1689YPDSF_1689YPDSF_3604YPDSF_0071
YPES377628 YPN_2978YPN_2978YPN_3301YPN_3921
YPES360102 YPA_0495YPA_0495YPA_3914YPA_3325
YPES349746 YPANGOLA_A3228YPANGOLA_A3228YPANGOLA_A0702YPANGOLA_A3733
YPES214092 YPO1023YPO1023YPO0370YPO0145
YPES187410 Y3161Y3161Y0627Y3924
YENT393305 YE3307YE3307YE0374YE3979
XORY360094 XOOORF_1979XOOORF_1979XOOORF_1979XOOORF_4193
XORY342109 XOO2578XOO2578XOO2578XOO1053
XORY291331 XOO2733XOO2733XOO2733XOO1156
XFAS405440 XFASM12_2082XFASM12_2082XFASM12_2082XFASM12_1861
XFAS183190 PD_1898PD_1898PD_1898PD_1696
XFAS160492 XF0759XF0759XF0759XF0368
XCAM487884 XCC-B100_1879XCC-B100_1879XCC-B100_1879XCC-B100_0953
XCAM316273 XCAORF_2571XCAORF_2571XCAORF_2571XCAORF_3573
XCAM314565 XC_1816XC_1816XC_1816XC_0942
XCAM190485 XCC2299XCC2299XCC2299XCC3233
XAXO190486 XAC2406XAC2406XAC2406XAC3386
XAUT78245 XAUT_4667XAUT_4667XAUT_4667XAUT_4669
WSUC273121 WS0243WS0243WS0243WS2049
VVUL216895 VV1_1291VV1_1291VV1_1291VV1_1376
VVUL196600 VV3074VV3074VV3074VV2995
VPAR223926 VP2820VP2820VP2820VP2751
VFIS312309 VF2326VF2326VF2326VF2298
VEIS391735 VEIS_1711VEIS_1711VEIS_1711VEIS_0023
VCHO345073 VC0395_A2755VC0395_A2755VC0395_A2755VC0395_A2212
VCHO VC0344VC0344VC0344VC2635
TTUR377629 TERTU_3561TERTU_3561TERTU_3561TERTU_3586
TSP1755 TETH514_0926TETH514_0776TETH514_0926TETH514_0242
TPSE340099 TETH39_0447TETH39_0284TETH39_0447TETH39_1978
TDEN326298 TMDEN_0722TMDEN_0722TMDEN_0722TMDEN_1892
TDEN292415 TBD_1519TBD_1519TBD_1519TBD_0201
TCRU317025 TCR_1083TCR_1083TCR_1083TCR_2056
STYP99287 STM2991STM2450STM4358STM3493
SSP94122 SHEWANA3_0594SHEWANA3_0594SHEWANA3_0594SHEWANA3_3900
SSP644076 SCH4B_4242SCH4B_4242SCH4B_4242SCH4B_4245
SSP387093 SUN_1742SUN_1741SUN_1742SUN_0350
SSP292414 TM1040_0866TM1040_0866TM1040_0866TM1040_0867
SSP1148 SLR1910SLR1744SLR1744SLL1434
SSON300269 SSO_2974SSO_2524SSO_4354SSO_3527
SSED425104 SSED_0794SSED_0794SSED_0794SSED_4271
SRUB309807 SRU_2497SRU_2497SRU_0686
SPRO399741 SPRO_3811SPRO_3463SPRO_0428SPRO_4611
SPEA398579 SPEA_3543SPEA_3543SPEA_3543SPEA_0232
SONE211586 SO_0600SO_0600SO_0600SO_0280
SMEL266834 SMC01335SMC01335SMC01335SMC01334
SMED366394 SMED_0959SMED_0959SMED_0959SMED_0960
SLOI323850 SHEW_0563SHEW_0563SHEW_0563SHEW_0207
SLAC55218 SL1157_2544SL1157_2544SL1157_2544SL1157_2545
SHIGELLA S3025AMIAAMIBMRCA
SHAL458817 SHAL_3637SHAL_3637SHAL_3637SHAL_4088
SGLO343509 SG1961SG1961SG0334SG2311
SFUM335543 SFUM_0729SFUM_0729SFUM_0729SFUM_2676
SFLE373384 SFV_2895SFV_2487SFV_4327SFV_3401
SFLE198214 AAN44315.1AAN43993.1AAN45741.1AAN44875.1
SENT454169 SEHA_C3203SEHA_C2710SEHA_C4776SEHA_C3799
SENT321314 SCH_2929SCH_2449SCH_4234SCH_3425
SENT295319 SPA2856SPA0416SPA4175SPA3358
SENT220341 STY3129STY2687STY4715STY4303
SENT209261 T2899T0408T4409T4013
SELO269084 SYC1743_CSYC1743_CSYC1539_C
SDYS300267 SDY_3034SDY_2633SDY_4420SDY_3682
SDEN318161 SDEN_3208SDEN_3208SDEN_3208SDEN_0255
SDEG203122 SDE_2670SDE_2670SDE_2670SDE_2692
SBOY300268 SBO_2707SBO_2460SBO_4287SBO_3383
SBAL402882 SHEW185_3770SHEW185_3770SHEW185_3770SHEW185_4090
SBAL399599 SBAL195_3896SBAL195_3896SBAL195_3896SBAL195_4208
SALA317655 SALA_3173SALA_3173SALA_3173SALA_3176
SACI56780 SYN_02145SYN_02145SYN_02145SYN_00304
RSPH349102 RSPH17025_1858RSPH17025_1858RSPH17025_1858
RSPH349101 RSPH17029_1625RSPH17029_1625RSPH17029_1625RSPH17029_1624
RSPH272943 RSP_2979RSP_2979RSP_2979RSP_2978
RSOL267608 RSC2539RSC2539RSC2539RSC2976
RRUB269796 RRU_A2148RRU_A2148RRU_A2148RRU_A2147
RPOM246200 SPO_2588SPO_2588SPO_2588SPO_2587
RPAL316058 RPB_3008RPB_3008RPB_3008RPB_3007
RPAL316057 RPD_2443RPD_2443RPD_2443RPD_2444
RPAL316056 RPC_2853RPC_2853RPC_2853RPC_2852
RPAL316055 RPE_2978RPE_2978RPE_2978RPE_2977
RPAL258594 RPA2451RPA2451RPA2451RPA2452
RMET266264 RMET_0526RMET_0526RMET_0526RMET_3274
RLEG216596 RL1742RL1742RL1742RL1743
RFER338969 RFER_3303RFER_3303RFER_3303RFER_0917
REUT381666 H16_A0597H16_A0597H16_A0597H16_A3441
REUT264198 REUT_A0584REUT_A0584REUT_A0584REUT_A3136
RETL347834 RHE_CH01646RHE_CH01646RHE_CH01646RHE_CH01647
RDEN375451 RD1_2821RD1_2821RD1_2821
PTHE370438 PTH_0361PTH_1425PTH_1013
PSYR223283 PSPTO_4945PSPTO_4945PSPTO_4945PSPTO_5133
PSYR205918 PSYR_0569PSYR_0569PSYR_0569PSYR_0402
PSTU379731 PST_3671PST_3671PST_3671PST_0551
PSP312153 PNUC_0595PNUC_0595PNUC_0595PNUC_0092
PSP296591 BPRO_3199BPRO_3199BPRO_3199BPRO_0780
PPUT76869 PPUTGB1_4949PPUTGB1_4949PPUTGB1_4949PPUTGB1_5134
PPUT351746 PPUT_4773PPUT_4773PPUT_4773PPUT_4957
PPUT160488 PP_4897PP_4897PP_4897PP_5084
PPRO298386 PBPRA3353PBPRA3353PBPRA3353PBPRA0274
PNAP365044 PNAP_1170PNAP_1170PNAP_1170PNAP_0671
PMUL272843 PM0903PM0903PM0903PM1230
PMEN399739 PMEN_0632PMEN_0632PMEN_0632PMEN_0541
PLUT319225 PLUT_2072PLUT_2072PLUT_2072PLUT_1945
PLUM243265 PLU0645PLU0645PLU4584PLU0095
PING357804 PING_3241PING_3241PING_3241PING_0157
PHAL326442 PSHAA0268PSHAA0268PSHAA0268PSHAA2721
PGIN242619 PG_1048PG_1048PG_1048
PFLU220664 PFL_0563PFL_0563PFL_0563PFL_0444
PFLU216595 PFLU0517PFLU6087PFLU0517PFLU0406
PFLU205922 PFL_0520PFL_0520PFL_0520PFL_0404
PENT384676 PSEEN4946PSEEN4946PSEEN4946PSEEN0328
PDIS435591 BDI_3970BDI_3970BDI_3970
PCAR338963 PCAR_1511PCAR_1511PCAR_1511PCAR_0010
PATL342610 PATL_3975PATL_3975PATL_3975PATL_0723
PAER208964 PA4947PA4947PA4947PA5045
PAER208963 PA14_65370PA14_65370PA14_65370PA14_66670
OCAR504832 OCAR_5986OCAR_5986OCAR_5986OCAR_5987
OANT439375 OANT_2267OANT_2267OANT_2267OANT_2266
NWIN323098 NWI_1719NWI_1719NWI_1719NWI_1716
NSP387092 NIS_0763NIS_0763NIS_0763NIS_1521
NSP103690 ALR0092ALR0093ALR0093ALR5324
NOCE323261 NOC_0337NOC_0337NOC_0337NOC_0246
NMUL323848 NMUL_A2532NMUL_A2532NMUL_A2532NMUL_A2078
NMEN374833 NMCC_1687NMCC_1687NMCC_1687NMCC_0421
NMEN272831 NMC1694NMC1694NMC1694NMC0414
NMEN122587 NMA2028NMA2028NMA2028NMA0655
NMEN122586 NMB_0456NMB_0456NMB_0456NMB_1807
NHAM323097 NHAM_1823NHAM_1823NHAM_1823NHAM_1824
NGON242231 NGO1502NGO1502NGO1502NGO0099
NEUT335283 NEUT_1896NEUT_1896NEUT_1896NEUT_1808
NEUR228410 NE0656NE0656NE0656NE2317
NARO279238 SARO_2317SARO_2317SARO_2317SARO_2316
MXAN246197 MXAN_3886MXAN_3886MXAN_3886MXAN_5181
MTHE264732 MOTH_0517MOTH_2296MOTH_0517MOTH_1710
MSUC221988 MS1515MS1515MS1515MS1975
MSP409 M446_5842M446_5842M446_5842M446_5843
MSP400668 MMWYL1_2635MMWYL1_2635MMWYL1_2635MMWYL1_4121
MSP266779 MESO_1709MESO_1709MESO_1709MESO_1708
MPET420662 MPE_A2027MPE_A2027MPE_A2027MPE_A3114
MMAR394221 MMAR10_1297MMAR10_1297MMAR10_1297MMAR10_1298
MMAG342108 AMB3238AMB3238AMB3238AMB3236
MLOT266835 MLR0213MLR0213MLR0213MLR0215
MFLA265072 MFLA_1381MFLA_1381MFLA_1381MFLA_2462
MEXT419610 MEXT_3661MEXT_3661MEXT_3661MEXT_3662
MCAP243233 MCA_1296MCA_1296MCA_1296MCA_0324
MAQU351348 MAQU_2772MAQU_2772MAQU_2772MAQU_0825
MAER449447 MAE_55580MAE_55580MAE_55580MAE_13560
LPNE400673 LPC_0437LPC_0437LPC_0437LPC_2366
LPNE297246 LPP2753LPP2753LPP2753LPP0987
LPNE297245 LPL2626LPL2626LPL2626LPL0956
LPNE272624 LPG2698LPG2698LPG2698LPG0925
LCHO395495 LCHO_1129LCHO_1129LCHO_1129LCHO_0176
KPNE272620 GKPORF_B2566GKPORF_B2097GKPORF_B3925GKPORF_B3108
JSP375286 MMA_0464MMA_0464MMA_0464MMA_3369
JSP290400 JANN_2536JANN_2536JANN_2536
ILOI283942 IL0330IL0330IL0330IL2467
HSOM228400 HSM_1567HSM_1567HSM_1567HSM_1071
HSOM205914 HS_1082HS_1082HS_1082HS_1108
HNEP81032 HNE_0674HNE_0674HNE_0674HNE_1911
HMOD498761 HM1_2720HM1_2720HM1_2720HM1_1892
HINF71421 HI_0066HI_0066HI_0066HI_0440
HINF374930 CGSHIEE_02965CGSHIEE_02965CGSHIEE_00790
HINF281310 NTHI0079NTHI0079NTHI0079NTHI0567
HHEP235279 HH_0828HH_0828HH_0828
HHAL349124 HHAL_0669HHAL_0669HHAL_0669HHAL_2253
HDUC233412 HD_0450HD_0450HD_0450HD_0426
HCHE349521 HCH_05387HCH_05387HCH_05387HCH_05973
HARS204773 HEAR0408HEAR0408HEAR0408HEAR3126
GURA351605 GURA_2385GURA_2385GURA_2385GURA_4406
GSUL243231 GSU_1821GSU_1821GSU_1821GSU_3133
GOXY290633 GOX1732GOX1732GOX1732GOX1284
GMET269799 GMET_1425GMET_1425GMET_1425GMET_0354
GBET391165 GBCGDNIH1_0282GBCGDNIH1_0282GBCGDNIH1_0282
FSUC59374 FSU0764FSU0764FSU0457
FNUC190304 FN1334FN1334FN1334
ESP42895 ENT638_3260ENT638_2956ENT638_0352ENT638_3809
ELIT314225 ELI_06765ELI_06765ELI_06765ELI_06760
EFER585054 EFER_0253EFER_0737EFER_4222EFER_3362
ECOO157 Z4134AMIAAMIBMRCA
ECOL83334 ECS3674ECS3306ECS5145ECS4238
ECOL585397 ECED1_3273ECED1_2877ECED1_4954ECED1_4055
ECOL585057 ECIAI39_3236ECIAI39_2580ECIAI39_4633ECIAI39_3874
ECOL585056 ECUMN_3144ECUMN_2756ECUMN_4702ECUMN_3854
ECOL585055 EC55989_3093EC55989_2724EC55989_4724EC55989_3801
ECOL585035 ECS88_3112ECS88_2623ECS88_4755ECS88_3782
ECOL585034 ECIAI1_2925ECIAI1_2492ECIAI1_4402ECIAI1_3535
ECOL481805 ECOLC_0898ECOLC_1244ECOLC_3844ECOLC_0317
ECOL469008 ECBD_0908ECBD_1247ECBD_3865ECBD_0351
ECOL439855 ECSMS35_3140ECSMS35_2590ECSMS35_4640ECSMS35_3673
ECOL413997 ECB_02665ECB_02335ECB_04036ECB_03248
ECOL409438 ECSE_3074ECSE_2725ECSE_4466ECSE_3657
ECOL405955 APECO1_3688APECO1_4113APECO1_2222APECO1_3068
ECOL364106 UTI89_C3218UTI89_C2768UTI89_C4769UTI89_C3894
ECOL362663 ECP_2829ECP_2456ECP_4414ECP_3482
ECOL331111 ECE24377A_3137ECE24377A_2721ECE24377A_4727ECE24377A_3867
ECOL316407 ECK2813:JW5449:B2817ECK2430:JW2428:B2435ECK4165:JW4127:B4169ECK3383:JW3359:B3396
ECOL199310 C3411C2969C5253C4166
ECAR218491 ECA1000ECA1000ECA3937ECA4099
DVUL882 DVU_2371DVU_2371DVU_0633
DSHI398580 DSHI_1169DSHI_1169DSHI_1169DSHI_1171
DRED349161 DRED_0618DRED_2693DRED_2693DRED_1803
DOLE96561 DOLE_1127DOLE_1127DOLE_1127DOLE_2534
DNOD246195 DNO_0311DNO_0311DNO_0311
DARO159087 DARO_3049DARO_3049DARO_3049DARO_0209
CVIO243365 CV_3822CV_3822CV_3822CV_0834
CTEP194439 CT_0054CT_0054CT_0054CT_0176
CSP78 CAUL_2573CAUL_2573CAUL_2573CAUL_2574
CSP501479 CSE45_2376CSE45_2376CSE45_2376CSE45_2375
CSAL290398 CSAL_1274CSAL_1274CSAL_1274CSAL_0607
CPSY167879 CPS_0322CPS_0322CPS_0322CPS_0466
CMUR243161 TC_0539TC_0539TC_0539
CJEJ407148 C8J_1213C8J_1213C8J_1213C8J_0472
CJEJ360109 JJD26997_0456JJD26997_0456JJD26997_0456JJD26997_1427
CJEJ354242 CJJ81176_1285CJJ81176_1285CJJ81176_1285CJJ81176_0536
CJEJ195099 CJE_1405CJE_1405CJE_1405CJE_0615
CJEJ192222 CJ1269CCJ1269CCJ1269CCJ0508
CJAP155077 CJA_3082CJA_3082CJA_3082CJA_0411
CHYD246194 CHY_2569CHY_2569CHY_1563
CHUT269798 CHU_1164CHU_1164CHU_0750CHU_1888
CHOM360107 CHAB381_1278CHAB381_1278CHAB381_1278CHAB381_0983
CFET360106 CFF8240_1209CFF8240_1209CFF8240_1209CFF8240_1032
CDES477974 DAUD_1509DAUD_1509DAUD_1509DAUD_1369
CCUR360105 CCV52592_0486CCV52592_0486CCV52592_0486CCV52592_0683
CCON360104 CCC13826_0497CCC13826_0497CCC13826_0497CCC13826_0048
CCHL340177 CAG_0076CAG_0076CAG_0076CAG_0590
CBUR434922 COXBU7E912_1188COXBU7E912_1188COXBU7E912_1188COXBU7E912_0118
CBUR360115 COXBURSA331_A0843COXBURSA331_A0843COXBURSA331_A0843COXBURSA331_A2091
CBUR227377 CBU_1085CBU_1085CBU_1085CBU_1887
CBLO291272 BPEN_080BPEN_080BPEN_080
CBLO203907 BFL078BFL078BFL078
CAULO CC1876CC1876CC1876CC1875
BVIE269482 BCEP1808_2656BCEP1808_2656BCEP1808_2656BCEP1808_1874
BTRI382640 BT_1192BT_1192BT_1192BT_1191
BTHE226186 BT_2141BT_2141BT_2141
BTHA271848 BTH_I0722BTH_I0722BTH_I0722BTH_I2082
BSUI470137 BSUIS_A0955BSUIS_A0955BSUIS_A0955BSUIS_A0956
BSUI204722 BR_0915BR_0915BR_0915BR_0916
BSUB BSU24190BSU27580BSU24190
BSP376 BRADO3513BRADO3513BRADO3513BRADO3514
BSP36773 BCEP18194_A5895BCEP18194_A5895BCEP18194_A5895BCEP18194_A3486
BSP107806 BU576BU576BU576
BQUI283165 BQ05880BQ05880BQ05880BQ05890
BPSE320373 BURPS668_0907BURPS668_0907BURPS668_0907BURPS668_3705
BPSE320372 BURPS1710B_A1122BURPS1710B_A1122BURPS1710B_A1122BURPS1710B_A4028
BPSE272560 BPSL0859BPSL0859BPSL0859BPSL3174
BPET94624 BPET0830BPET0830BPET0830BPET4912
BPER257313 BP0246BP0246BP0246BP3655
BPAR257311 BPP3621BPP3621BPP3621BPP0070
BOVI236 GBOORF0941GBOORF0941GBOORF0941GBOORF0942
BMEL359391 BAB1_0931BAB1_0931BAB1_0931BAB1_0932
BMEL224914 BMEI1056BMEI1056BMEI1056BMEI1055
BMAL320389 BMA10247_0114BMA10247_0114BMA10247_0114BMA10247_2802
BMAL320388 BMASAVP1_A0665BMASAVP1_A0665BMASAVP1_A0665BMASAVP1_A3201
BMAL243160 BMA_0365BMA_0365BMA_0365BMA_2752
BJAP224911 BLR4306BLR4306BLR4306BLR4307
BHEN283166 BH08710BH08710BH08710BH08700
BFRA295405 BF3823BF3823BF3823
BFRA272559 BF3615BF3615BF3615
BCLA66692 ABC3295ABC3448ABC3448ABC3899
BCIC186490 BCI_0585BCI_0585BCI_0585
BCEN331272 BCEN2424_2563BCEN2424_2563BCEN2424_2563BCEN2424_1948
BCEN331271 BCEN_1952BCEN_1952BCEN_1952BCEN_2720
BCAN483179 BCAN_A0927BCAN_A0927BCAN_A0927BCAN_A0928
BBRO257310 BB4056BB4056BB4056BB0070
BBAC360095 BARBAKC583_0802BARBAKC583_0802BARBAKC583_0802BARBAKC583_0803
BBAC264462 BD2699BD2699BD2699BD0160
BAPH198804 BUSG555BUSG555BUSG555
BAMB398577 BAMMC406_2482BAMMC406_2482BAMMC406_2482BAMMC406_1862
BAMB339670 BAMB_2611BAMB_2611BAMB_2611BAMB_1935
BABO262698 BRUAB1_0925BRUAB1_0925BRUAB1_0925BRUAB1_0926
AVAR240292 AVA_1466AVA_1466AVA_1466AVA_0950
ASP76114 EBA4451EBA4451EBA4451EBA2268
ASP62928 AZO1243AZO1243AZO1243AZO3651
ASP232721 AJS_0983AJS_0983AJS_0983AJS_0729
ASAL382245 ASA_3372ASA_3372ASA_3372ASA_1119
APLE434271 APJL_1155APJL_1155APJL_1155APJL_0196
APLE416269 APL_1136APL_1136APL_1136APL_0195
AMAR329726 AM1_2518AM1_2518AM1_B0411
AHYD196024 AHA_0921AHA_0921AHA_0921AHA_3195
AFER243159 AFE_0742AFE_0742AFE_0742AFE_0875
AEHR187272 MLG_0570MLG_0570MLG_0570MLG_2754
ADEH290397 ADEH_1694ADEH_3362ADEH_1694ADEH_3339
ACRY349163 ACRY_2027ACRY_2027ACRY_2027ACRY_1687
ACAU438753 AZC_3626AZC_3626AZC_3626AZC_3625
ABUT367737 ABU_0642ABU_0642ABU_0642ABU_1902
ABOR393595 ABO_2206ABO_2206ABO_2206ABO_2238
ABAU360910 BAV0731BAV0731BAV0731BAV2038
ABAC204669 ACID345_1153ACID345_1153ACID345_1153ACID345_4231
AAVE397945 AAVE_1305AAVE_1305AAVE_1305AAVE_0995
AAEO224324 AQ_1681AQ_1681AQ_1681AQ_624


Organism features enriched in list (features available for 274 out of the 291 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00020182892
Disease:Gastroenteritis 0.00004681313
Endospores:No 4.039e-1358211
Endospores:Yes 1.474e-6953
GC_Content_Range4:0-40 5.043e-3135213
GC_Content_Range4:40-60 6.087e-12145224
GC_Content_Range4:60-100 8.565e-793145
GC_Content_Range7:0-30 2.272e-7647
GC_Content_Range7:30-40 1.210e-2029166
GC_Content_Range7:50-60 4.297e-1282107
GC_Content_Range7:60-70 5.297e-992134
GC_Content_Range7:70-100 0.0085840111
Genome_Size_Range5:0-2 1.536e-2124155
Genome_Size_Range5:4-6 3.912e-17133184
Genome_Size_Range5:6-10 0.00015973447
Genome_Size_Range9:0-1 0.0003039427
Genome_Size_Range9:1-2 5.188e-1720128
Genome_Size_Range9:2-3 0.008404346120
Genome_Size_Range9:4-5 4.706e-86996
Genome_Size_Range9:5-6 7.957e-86488
Genome_Size_Range9:6-8 0.00002673038
Gram_Stain:Gram_Neg 6.486e-53244333
Gram_Stain:Gram_Pos 1.378e-378150
Habitat:Multiple 0.006103896178
Habitat:Specialized 0.00072761453
Motility:No 4.182e-1728151
Motility:Yes 7.092e-12166267
Optimal_temp.:- 0.0058439134257
Optimal_temp.:25-30 4.178e-71919
Optimal_temp.:35-37 0.00004681313
Optimal_temp.:37 0.009227640106
Oxygen_Req:Anaerobic 0.000187432102
Oxygen_Req:Facultative 0.0092159106201
Oxygen_Req:Microaerophilic 0.00564981418
Salinity:Non-halophilic 0.001000036106
Shape:Coccobacillus 0.00285471011
Shape:Coccus 4.761e-91582
Shape:Rod 1.499e-13206347
Shape:Sphere 0.0034966319
Temp._range:Hyperthermophilic 0.0000700223
Temp._range:Mesophilic 0.0006298237473
Temp._range:Thermophilic 0.0004822735



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 308
Effective number of orgs (counting one per cluster within 468 clusters): 234

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP64471 ncbi Synechococcus sp. CC93111
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP56811 Psychrobacter sp.1
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GFOR411154 ncbi Gramella forsetii KT08031
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTET212717 ncbi Clostridium tetani E880
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CNOV386415 ncbi Clostridium novyi NT1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEI306537 ncbi Corynebacterium jeikeium K4110
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6301
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W1
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L1
BCER226900 ncbi Bacillus cereus ATCC 145791
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor1
BANT260799 ncbi Bacillus anthracis Sterne1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP11
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7458   EG11823   EG11363   EG10748   
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTEN273068 TTE2424
TSP28240
TROS309801
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124 TERY_0444
TELO197221 TLL0049
TDEN243275
TACI273075
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP64471 GSYN0732
SSP321332 CYB_2512
SSOL273057
SSAP342451
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SHAE279808 SH1289
SGOR29390
SERY405948
SEPI176280
SEPI176279
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SAGA211110
SAGA208435
SAGA205921
SACI330779
RXYL266117 RXYL_2308
RTYP257363 RT0794
RSP357808
RSP101510
RSAL288705
RRIC452659 RRIOWA_1455
RRIC392021 A1G_06815
RPRO272947 RP807
RMAS416276 RMA_1261
RFEL315456 RF_1276
RCON272944 RC1245
RCAS383372
RCAN293613 A1E_05135
RBEL391896 A1I_07390
RBEL336407 RBE_0108
RALB246199
RAKA293614 A1C_06240
PTOR263820
PSP56811 PSYCPRWF_0395
PSP117
PRUM264731
PPEN278197
PMOB403833
PMAR93060
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539 PRO_1044
PMAR146891
PISL384616
PHOR70601
PFUR186497
PCRY335284 PCRYO_2174
PAST100379
PARS340102
PARC259536 PSYC_1884
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109
NSP35761
NSEN222891
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043 LWE1534
LSPH444177 BSPH_3903
LSAK314315
LREU557436
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253 LI0347
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LBIF355278 LBF_1378
LACI272621
KRAD266940
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL357544 HPAG1_0757
HPY
HMUK485914
HMAR272569
HBUT415426
HAUR316274
HACI382638 HAC_0641
GVIO251221 GLR1491
GTHE420246 GTNG_3351
GFOR411154 GFO_1639
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSP1855
FSP106370
FRANT
FPHI484022
FNOD381764
FMAG334413
FJOH376686 FJOH_4585
FALN326424
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484
DSP255470
DSP216389
DRAD243230
DPSY177439
DHAF138119 DSY0288
DGEO319795
DETH243164
CVES412965
CTET212717
CSUL444179
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992 SAR11_0732
CNOV386415 NT01CX_1152
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEI306537
CGLU196627
CFEL264202 CF0631
CEFF196164
CDIP257309
CDIF272563 CD2761
CCAV227941 CCA_00377
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBEI290402 CBEI_0188
CACE272562
BXEN266265
BWEI315730 BCERKBAB4_5637
BTUR314724
BTHU412694 BALH_2087
BTHU281309 BT9727_5055
BPUM315750 BPUM_2399
BLON206672
BHER314723
BGAR290434
BCER572264 BCA_2413
BCER405917 BCE_2370
BCER315749 BCER98_3888
BCER288681 BCE33L5071
BCER226900 BC_2281
BBUR224326
BAPH372461
BANT592021 BAA_2403
BANT568206 BAMEG_2255
BANT261594 GBAA2345
BANT260799 BAS2185
BAFZ390236
AYEL322098
AURANTIMONAS
ASP62977 ACIAD3361
ASP1667
APHA212042
APER272557
AORE350688
ANAE240017
AMAR234826
ALAI441768
AFUL224325
ACEL351607
AAUR290340


Organism features enriched in list (features available for 287 out of the 308 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00002556392
Arrangment:Clusters 4.571e-61717
Arrangment:Singles 0.0098269129286
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00037271111
Disease:Wide_range_of_infections 0.00037271111
Endospores:No 4.362e-14147211
Endospores:Yes 0.00003104053
GC_Content_Range4:0-40 2.502e-32172213
GC_Content_Range4:40-60 1.802e-1466224
GC_Content_Range4:60-100 7.126e-649145
GC_Content_Range7:0-30 1.403e-84147
GC_Content_Range7:30-40 2.264e-20131166
GC_Content_Range7:40-50 0.004652646117
GC_Content_Range7:50-60 5.098e-1320107
GC_Content_Range7:60-70 4.536e-839134
GC_Content_Range7:70-100 0.00438041011
Genome_Size_Range5:0-2 1.537e-22127155
Genome_Size_Range5:4-6 1.142e-1645184
Genome_Size_Range5:6-10 0.00097711347
Genome_Size_Range9:0-1 0.00144302127
Genome_Size_Range9:1-2 7.594e-19106128
Genome_Size_Range9:4-5 1.450e-92196
Genome_Size_Range9:5-6 3.359e-62488
Genome_Size_Range9:6-8 0.0001689838
Gram_Stain:Gram_Neg 5.353e-5078333
Gram_Stain:Gram_Pos 8.036e-38138150
Habitat:Specialized 0.00192653653
Motility:No 1.525e-19121151
Motility:Yes 7.550e-1389267
Optimal_temp.:- 0.0005634108257
Optimal_temp.:30-37 2.181e-61818
Optimal_temp.:37 0.005795663106
Oxygen_Req:Anaerobic 0.000044868102
Salinity:Non-halophilic 0.000536767106
Shape:Coccobacillus 0.0058119111
Shape:Coccus 3.089e-106682
Shape:Irregular_coccus 4.571e-61717
Shape:Rod 8.254e-12131347
Shape:Sphere 0.00131221619
Temp._range:Hyperthermophilic 0.00001642123
Temp._range:Mesophilic 0.0011462219473
Temp._range:Thermophilic 0.00863742435



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-1269 (CMP-KDO biosynthesis I)3252650.7290
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002530.7268
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482710.7027
GLYCOCAT-PWY (glycogen degradation I)2462200.6917
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2182030.6825
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912370.6518
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962380.6426
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2252000.6357
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951820.6308
PWY-5913 (TCA cycle variation IV)3012370.6207
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902310.6162
TYRFUMCAT-PWY (tyrosine degradation I)1841710.5998
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222810.5773
PWY-5918 (heme biosynthesis I)2722160.5770
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761620.5702
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491450.5687
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862200.5579
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982690.5566
REDCITCYC (TCA cycle variation II)1741580.5502
PWY-4041 (γ-glutamyl cycle)2792150.5479
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292370.5370
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552010.5358
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831600.5264
PWY-5028 (histidine degradation II)1301270.5247
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911640.5218
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392390.5210
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162700.5170
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652490.5128
PWY-5340 (sulfate activation for sulfonation)3852570.5110
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561410.5060
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911610.5009
DAPLYSINESYN-PWY (lysine biosynthesis I)3422370.4995
AST-PWY (arginine degradation II (AST pathway))1201160.4891
PWY0-862 (cis-dodecenoyl biosynthesis)3432350.4837
PWY-5938 ((R)-acetoin biosynthesis I)3762490.4826
PWY-6389 ((S)-acetoin biosynthesis)3682430.4653
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491870.4643
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491870.4643
P344-PWY (acrylonitrile degradation)2101640.4486
KDOSYN-PWY (KDO transfer to lipid IVA I)1801470.4466
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791460.4436
GLUCONSUPER-PWY (D-gluconate degradation)2291720.4340
PWY-5188 (tetrapyrrole biosynthesis I)4392660.4298
PROSYN-PWY (proline biosynthesis I)4752780.4243
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742380.4158
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94900.4143
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96910.4113
THISYN-PWY (thiamin biosynthesis I)5022850.4108
PWY-5386 (methylglyoxal degradation I)3052060.4089
P601-PWY (D-camphor degradation)95900.4083
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)1121010.4079
PWY-5148 (acyl-CoA hydrolysis)2271670.4076
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351150.4056
PWY-3162 (tryptophan degradation V (side chain pathway))94890.4053
PWY0-501 (lipoate biosynthesis and incorporation I)3852410.4050
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582690.4015
GALACTCAT-PWY (D-galactonate degradation)104950.4005



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11823   EG11363   EG10748   
G74580.9999840.9999810.999166
EG118230.9999770.999176
EG113630.99917
EG10748



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PAIRWISE BLAST SCORES:

  G7458   EG11823   EG11363   EG10748   
G74580.0f03.3e-523.5e-44-
EG118234.6e-460.0f03.0e-33-
EG113632.7e-382.1e-320.0f0-
EG10748---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7458 (centered at G7458)
EG11823 (centered at EG11823)
EG11363 (centered at EG11363)
EG10748 (centered at EG10748)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7458   EG11823   EG11363   EG10748   
305/623307/623308/623320/623
AAEO224324:0:Tyes7427427420
AAVE397945:0:Tyes3033033030
ABAC204669:0:Tyes0003102
ABAU360910:0:Tyes0001305
ABOR393595:0:Tyes00032
ABUT367737:0:Tyes0001258
ACAU438753:0:Tyes1110
ACRY349163:8:Tyes3473473470
ADEH290397:0:Tyes0168401655
AEHR187272:0:Tyes0002170
AFER243159:0:Tyes000131
AHYD196024:0:Tyes0002218
AMAR329726:7:Tyes---0
AMAR329726:9:Tyes00--
AMET293826:0:Tyes-01000-
APLE416269:0:Tyes9399399390
APLE434271:0:Tno9289289280
ASAL382245:5:Tyes2160216021600
ASP232721:2:Tyes2552552550
ASP62928:0:Tyes0002442
ASP62977:0:Tyes---0
ASP76114:2:Tyes1293129312930
AVAR240292:3:Tyes5205205200
BABO262698:1:Tno0001
BAMB339670:3:Tno6986986980
BAMB398577:3:Tno6376376370
BAMY326423:0:Tyes0222--
BANT260799:0:Tno---0
BANT261594:2:Tno---0
BANT568206:2:Tyes---0
BANT592021:2:Tno---0
BAPH198804:0:Tyes000-
BBAC264462:0:Tyes2344234423440
BBAC360095:0:Tyes0001
BBRO257310:0:Tyes4017401740170
BCAN483179:1:Tno0001
BCEN331271:2:Tno000772
BCEN331272:3:Tyes6146146140
BCER226900:1:Tyes---0
BCER288681:0:Tno---0
BCER315749:1:Tyes---0
BCER405917:1:Tyes---0
BCER572264:1:Tno---0
BCIC186490:0:Tyes000-
BCLA66692:0:Tyes0154154601
BFRA272559:1:Tyes000-
BFRA295405:0:Tno000-
BHAL272558:0:Tyes-0-3645
BHEN283166:0:Tyes1110
BJAP224911:0:Fyes0001
BLIC279010:0:Tyes-00-
BMAL243160:1:Tno0002122
BMAL320388:1:Tno0002471
BMAL320389:1:Tyes0002629
BMEL224914:1:Tno1110
BMEL359391:1:Tno0001
BOVI236:1:Tyes0001
BPAR257311:0:Tno3392339233920
BPER257313:0:Tyes0003084
BPET94624:0:Tyes0004121
BPSE272560:1:Tyes0002331
BPSE320372:1:Tno0002776
BPSE320373:1:Tno0002695
BPUM315750:0:Tyes-0--
BQUI283165:0:Tyes0001
BSP107806:2:Tyes000-
BSP36773:2:Tyes2455245524550
BSP376:0:Tyes0001
BSUB:0:Tyes03490-
BSUI204722:1:Tyes0001
BSUI470137:1:Tno0001
BTHA271848:1:Tno0001330
BTHE226186:0:Tyes000-
BTHU281309:1:Tno---0
BTHU412694:1:Tno---0
BTRI382640:1:Tyes1110
BVIE269482:7:Tyes7717717710
BWEI315730:3:Tyes---0
CABO218497:0:Tyes0-0-
CAULO:0:Tyes1110
CBEI290402:0:Tyes--0-
CBLO203907:0:Tyes000-
CBLO291272:0:Tno000-
CBUR227377:1:Tyes000779
CBUR360115:1:Tno0001178
CBUR434922:2:Tno1022102210220
CCAV227941:1:Tyes--0-
CCHL340177:0:Tyes000522
CCON360104:2:Tyes2832832830
CCUR360105:0:Tyes000706
CDES477974:0:Tyes1441441440
CDIF272563:1:Tyes--0-
CFEL264202:1:Tyes--0-
CFET360106:0:Tyes1761761760
CHOM360107:1:Tyes2932932930
CHUT269798:0:Tyes40240201119
CHYD246194:0:Tyes970970-0
CJAP155077:0:Tyes2606260626060
CJEJ192222:0:Tyes7427427420
CJEJ195099:0:Tno7617617610
CJEJ354242:2:Tyes7277277270
CJEJ360109:0:Tyes000918
CJEJ407148:0:Tno7617617610
CMUR243161:1:Tyes000-
CNOV386415:0:Tyes0---
CPEL335992:0:Tyes---0
CPSY167879:0:Tyes000136
CSAL290398:0:Tyes6806806800
CSP501479:8:Fyes1110
CSP78:2:Tyes0001
CTEP194439:0:Tyes000122
CTRA471472:0:Tyes0-0-
CTRA471473:0:Tno0-0-
CVIO243365:0:Tyes3073307330730
DARO159087:0:Tyes2866286628660
DDES207559:0:Tyes0--1783
DHAF138119:0:Tyes---0
DNOD246195:0:Tyes000-
DOLE96561:0:Tyes0001422
DRED349161:0:Tyes0208220821184
DSHI398580:5:Tyes0002
DVUL882:1:Tyes-172817280
ECAR218491:0:Tyes0029793150
ECOL199310:0:Tno435022501179
ECOL316407:0:Tno367017071425
ECOL331111:6:Tno392019191099
ECOL362663:0:Tno377019471029
ECOL364106:1:Tno447019821116
ECOL405955:2:Tyes442019151043
ECOL409438:6:Tyes36101797955
ECOL413997:0:Tno33901737930
ECOL439855:4:Tno525019601034
ECOL469008:0:Tno56491335040
ECOL481805:0:Tno58594335400
ECOL585034:0:Tno424018541025
ECOL585035:0:Tno473020441123
ECOL585055:0:Tno368019561063
ECOL585056:2:Tno394019321095
ECOL585057:0:Tno676020661312
ECOL585397:0:Tno397020301154
ECOL83334:0:Tno38401903961
ECOLI:0:Tno38801761970
ECOO157:0:Tno38901874971
EFER585054:1:Tyes047939253095
ELIT314225:0:Tyes1110
ESP42895:1:Tyes2940262703487
FJOH376686:0:Tyes--0-
FNUC190304:0:Tyes000-
FSUC59374:0:Tyes301301-0
GBET391165:0:Tyes000-
GFOR411154:0:Tyes0---
GKAU235909:1:Tyes--0151
GMET269799:1:Tyes1079107910790
GOXY290633:5:Tyes4424424420
GSUL243231:0:Tyes0001307
GTHE420246:1:Tyes---0
GURA351605:0:Tyes0002007
GVIO251221:0:Tyes---0
HACI382638:1:Tyes0---
HARS204773:0:Tyes0002570
HCHE349521:0:Tyes000577
HDUC233412:0:Tyes2121210
HHAL349124:0:Tyes0001599
HHEP235279:0:Tyes000-
HINF281310:0:Tyes000447
HINF374930:0:Tyes372-3720
HINF71421:0:Tno000357
HMOD498761:0:Tyes8518518510
HNEP81032:0:Tyes0001215
HPYL357544:1:Tyes--0-
HPYL85963:0:Tno0-0-
HSOM205914:1:Tyes00026
HSOM228400:0:Tno4964964960
ILOI283942:0:Tyes0002190
JSP290400:1:Tyes000-
JSP375286:0:Tyes0002943
KPNE272620:2:Tyes45701775990
LBIF355278:2:Tyes---0
LBIF456481:2:Tno710--0
LBOR355276:1:Tyes-00-
LBOR355277:1:Tno-00-
LCHO395495:0:Tyes9639639630
LINT189518:1:Tyes-00-
LINT267671:1:Tno-00-
LINT363253:3:Tyes---0
LPNE272624:0:Tno1769176917690
LPNE297245:1:Fno1665166516650
LPNE297246:1:Fyes1769176917690
LPNE400673:0:Tno0001888
LSPH444177:1:Tyes--0-
LWEL386043:0:Tyes-0--
MAER449447:0:Tyes4242424242420
MAQU351348:2:Tyes1925192519250
MCAP243233:0:Tyes9049049040
MEXT419610:0:Tyes0001
MFLA265072:0:Tyes0001078
MLOT266835:2:Tyes0001
MMAG342108:0:Tyes2220
MMAR394221:0:Tyes0001
MPET420662:1:Tyes0001084
MSP266779:3:Tyes1110
MSP400668:0:Tyes0001504
MSP409:2:Tyes0001
MSUC221988:0:Tyes000474
MTHE264732:0:Tyes0173601165
MXAN246197:0:Tyes0001255
NARO279238:0:Tyes1110
NEUR228410:0:Tyes0001686
NEUT335283:2:Tyes8686860
NGON242231:0:Tyes1280128012800
NHAM323097:2:Tyes0001
NMEN122586:0:Tno0001299
NMEN122587:0:Tyes1304130413040
NMEN272831:0:Tno1110111011100
NMEN374833:0:Tno1247124712470
NMUL323848:3:Tyes4494494490
NOCE323261:1:Tyes8787870
NSP103690:6:Tyes0115287
NSP387092:0:Tyes000762
NWIN323098:0:Tyes3330
OANT439375:5:Tyes1110
OCAR504832:0:Tyes0001
PAER208963:0:Tyes00099
PAER208964:0:Tno00098
PARC259536:0:Tyes---0
PATL342610:0:Tyes3279327932790
PCAR338963:0:Tyes1516151615160
PCRY335284:1:Tyes---0
PDIS435591:0:Tyes000-
PENT384676:0:Tyes4346434643460
PFLU205922:0:Tyes1161161160
PFLU216595:1:Tyes10554821050
PFLU220664:0:Tyes1191191190
PGIN242619:0:Tyes000-
PHAL326442:1:Tyes0002492
PING357804:0:Tyes2907290729070
PINT246198:1:Tyes0-0-
PLUM243265:0:Fyes55455445580
PLUT319225:0:Tyes1271271270
PMAR167539:0:Tyes-0--
PMAR74547:0:Tyes-129-0
PMEN399739:0:Tyes8989890
PMUL272843:1:Tyes000327
PNAP365044:8:Tyes5095095090
PPRO298386:2:Tyes3069306930690
PPUT160488:0:Tno000185
PPUT351746:0:Tyes000184
PPUT76869:0:Tno000185
PSP296591:2:Tyes2414241424140
PSP312153:0:Tyes5035035030
PSP56811:2:Tyes---0
PSTU379731:0:Tyes3103310331030
PSYR205918:0:Tyes1671671670
PSYR223283:2:Tyes000187
PTHE370438:0:Tyes01091-673
RAKA293614:0:Fyes---0
RBEL336407:0:Tyes---0
RBEL391896:0:Fno---0
RCAN293613:0:Fyes---0
RCON272944:0:Tno---0
RDEN375451:4:Tyes000-
RETL347834:5:Tyes0001
REUT264198:3:Tyes0002574
REUT381666:2:Tyes0002764
RFEL315456:2:Tyes---0
RFER338969:1:Tyes2386238623860
RLEG216596:6:Tyes0001
RMAS416276:1:Tyes---0
RMET266264:2:Tyes0002734
RPAL258594:0:Tyes0001
RPAL316055:0:Tyes1110
RPAL316056:0:Tyes1110
RPAL316057:0:Tyes0001
RPAL316058:0:Tyes1110
RPOM246200:1:Tyes1110
RPRO272947:0:Tyes---0
RRIC392021:0:Fno---0
RRIC452659:0:Tyes---0
RRUB269796:1:Tyes1110
RSOL267608:1:Tyes000445
RSPH272943:4:Tyes1110
RSPH349101:2:Tno1110
RSPH349102:5:Tyes000-
RTYP257363:0:Tno---0
RXYL266117:0:Tyes---0
SACI56780:0:Tyes0001907
SALA317655:1:Tyes0003
SBAL399599:3:Tyes000322
SBAL402882:1:Tno000326
SBOY300268:1:Tyes22901731874
SDEG203122:0:Tyes00022
SDEN318161:0:Tyes3021302130210
SDYS300267:1:Tyes37101649974
SELO269084:0:Tyes212212-0
SENT209261:0:Tno2369038193438
SENT220341:0:Tno413018681479
SENT295319:0:Tno2343036102831
SENT321314:2:Tno48801822991
SENT454169:2:Tno470019711043
SFLE198214:0:Tyes33801812911
SFLE373384:0:Tno39001752871
SFUM335543:0:Tyes0001927
SGLO343509:3:Tyes1667166702024
SHAE279808:0:Tyes-0--
SHAL458817:0:Tyes000464
SHIGELLA:0:Tno346017791553
SLAC55218:1:Fyes0001
SLOI323850:0:Tyes3663663660
SMED366394:3:Tyes0001
SMEL266834:2:Tyes0001
SONE211586:1:Tyes3153153150
SPEA398579:0:Tno3437343734370
SPRO399741:1:Tyes3435308104241
SRUB309807:1:Tyes1775-17750
SSED425104:0:Tyes0003588
SSON300269:1:Tyes42901725952
SSP1131:0:Tyes-324-0
SSP1148:0:Tyes06606601194
SSP292414:2:Tyes0001
SSP321327:0:Tyes0--640
SSP321332:0:Tyes---0
SSP387093:0:Tyes1393139213930
SSP644076:5:Fyes0003
SSP64471:0:Tyes---0
SSP84588:0:Tyes-0-679
SSP94122:1:Tyes0003386
STYP99287:1:Tyes537018931037
SWOL335541:0:Tyes--0756
TCRU317025:0:Tyes000993
TDEN292415:0:Tyes1341134113410
TDEN326298:0:Tyes0001186
TELO197221:0:Tyes---0
TERY203124:0:Tyes---0
TPSE340099:0:Tyes16101611651
TSP1755:0:Tyes6675206670
TTEN273068:0:Tyes--0-
TTHE262724:1:Tyes00--
TTHE300852:2:Tyes00--
TTUR377629:0:Tyes00024
VCHO:0:Tyes0002329
VCHO345073:1:Tno4864864860
VEIS391735:1:Tyes1664166416640
VFIS312309:2:Tyes2828280
VPAR223926:1:Tyes6969690
VVUL196600:2:Tyes7979790
VVUL216895:1:Tno00079
WSUC273121:0:Tyes0001649
XAUT78245:1:Tyes0002
XAXO190486:0:Tyes000980
XCAM190485:0:Tyes000934
XCAM314565:0:Tno8728728720
XCAM316273:0:Tno000992
XCAM487884:0:Tno9319319310
XFAS160492:2:Tno3973973970
XFAS183190:1:Tyes1981981980
XFAS405440:0:Tno2032032030
XORY291331:0:Tno1593159315930
XORY342109:0:Tyes1541154115410
XORY360094:0:Tno0004277
YENT393305:1:Tyes2836283603502
YPES187410:5:Tno2551255103319
YPES214092:3:Tno8428422190
YPES349746:2:Tno2463246302957
YPES360102:3:Tyes0034752873
YPES377628:2:Tno00328955
YPES386656:2:Tno1614161435450
YPSE273123:2:Tno2636263603356
YPSE349747:2:Tno0026362946
ZMOB264203:0:Tyes0002



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