CANDIDATE ID: 963

CANDIDATE ID: 963

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9903167e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10590 (metL) (b3940)
   Products of gene:
     - ASPKINIIHOMOSERDEHYDROGII-MONOMER (MetL)
     - ASPKINIIHOMOSERDEHYDROGII-CPLX (aspartate kinase / homoserine dehydrogenase)
       Reactions:
        L-aspartate + ATP  ->  L-aspartyl-4-phosphate + ADP + H+
         In pathways
         MET-SAM-PWY (superpathway of S-adenosyl-L-methionine biosynthesis)
         METSYN-PWY (homoserine and methionine biosynthesis)
         PWY-5345 (PWY-5345)
         PWY-5347 (PWY-5347)
         THRESYN-PWY (threonine biosynthesis)
         PWY-724 (PWY-724)
         PWY-3001 (PWY-3001)
         P4-PWY (superpathway of lysine, threonine and methionine biosynthesis I)
         PWY0-781 (aspartate superpathway)
         PWY-6565 (PWY-6565)
         P101-PWY (P101-PWY)
         HOMOSERSYN-PWY (homoserine biosynthesis)
         DAPLYSINESYN-PWY (lysine biosynthesis I)
         PWY-2941 (PWY-2941)
         PWY-5097 (PWY-5097)
         PWY-2942 (PWY-2942)
         PWY-6559 (PWY-6559)
         PWY-6562 (PWY-6562)
        NAD(P)H + L-aspartate-semialdehyde + H+  ->  NAD(P)+ + L-homoserine
         In pathways
         MET-SAM-PWY (superpathway of S-adenosyl-L-methionine biosynthesis)
         METSYN-PWY (homoserine and methionine biosynthesis)
         PWY-5345 (PWY-5345)
         PWY-5347 (PWY-5347)
         THRESYN-PWY (threonine biosynthesis)
         PWY-724 (PWY-724)
         PWY-3001 (PWY-3001)
         P4-PWY (superpathway of lysine, threonine and methionine biosynthesis I)
         PWY0-781 (aspartate superpathway)
         HOMOSERSYN-PWY (homoserine biosynthesis)

- EG10588 (metJ) (b3938)
   Products of gene:
     - PD04032 (MetJ transcriptional repressor)
     - MONOMER0-157 (MetJ-S-adenosylmethionine)
     - CPLX0-7796 (MetJ-S-adenosylmethionine transcriptional repressor)
       Regulatees:
        TU00041 (metA)
        TU00218 (metF)
        TU00074 (ahpCF)
        TU00191 (metC)
        TU0-8221 (metE)
        TU0-8223 (metR)
        TU0-8224 (metR)
        TU0-3741 (metBL)
        TU0-1783 (metK)
        TU0-13539 (folE-yeiB)
        TU0-2302 (metNIQ)

- EG10585 (metF) (b3941)
   Products of gene:
     - METHYLENETHFREDUCT-MONOMER (MetF)
     - METHYLENETHFREDUCT-CPLX (5,10-methylenetetrahydrofolate reductase)
       Reactions:
        NAD+ + 5-methyl-tetrahydrofolate  =  NADH + 5,10-methylene-THF + H+
         In pathways
         PWY-2201 (PWY-2201)
         PWY-3841 (PWY-3841)
         1CMET2-PWY (formylTHF biosynthesis I)

- EG10582 (metB) (b3939)
   Products of gene:
     - O-SUCCHOMOSERLYASE-MONOMER (MetB)
     - O-SUCCHOMOSERLYASE-CPLX (O-succinylhomoserine lyase / O-succinylhomoserine(thiol)-lyase)
       Reactions:
        2-oxobutanoate + succinate + ammonia + 2 H+  =  O-succinyl-L-homoserine + H2O
        L-cysteine + O-succinyl-L-homoserine  ->  succinate + L-cystathionine + H+
         In pathways
         MET-SAM-PWY (superpathway of S-adenosyl-L-methionine biosynthesis)
         PWY0-781 (aspartate superpathway)
         P4-PWY (superpathway of lysine, threonine and methionine biosynthesis I)
         PWY-5347 (PWY-5347)
         METSYN-PWY (homoserine and methionine biosynthesis)
         HOMOSER-METSYN-PWY (methionine biosynthesis I)



Back to top


ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 106
Effective number of orgs (counting one per cluster within 468 clusters): 61

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO923
YPES187410 ncbi Yersinia pestis KIM 103
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula13
XFAS160492 ncbi Xylella fastidiosa 9a5c3
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148633
SSP94122 ncbi Shewanella sp. ANA-34
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SRUB309807 ncbi Salinibacter ruber DSM 138553
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
RSP357808 ncbi Roseiflexus sp. RS-13
RCAS383372 ncbi Roseiflexus castenholzii DSM 139413
PPRO298386 ncbi Photobacterium profundum SS94
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PLUT319225 ncbi Chlorobium luteolum DSM 2733
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1253
PATL342610 ncbi Pseudoalteromonas atlantica T6c3
MXAN246197 ncbi Myxococcus xanthus DK 16223
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MMAR394221 ncbi Maricaulis maris MCS103
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
ILOI283942 ncbi Idiomarina loihiensis L2TR3
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HMOD498761 ncbi Heliobacterium modesticaldum Ice13
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
GFOR411154 ncbi Gramella forsetii KT08033
FJOH376686 ncbi Flavobacterium johnsoniae UW1013
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
CTEP194439 ncbi Chlorobium tepidum TLS3
CPSY167879 ncbi Colwellia psychrerythraea 34H3
CPHY357809 ncbi Clostridium phytofermentans ISDg3
CCHL340177 ncbi Chlorobium chlorochromatii CaD33
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6573
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
APLE416269 ncbi Actinobacillus pleuropneumoniae L203
AHYD196024 Aeromonas hydrophila dhakensis4
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453


Names of the homologs of the genes in the group in each of these orgs
  EG10590   EG10588   EG10585   EG10582   
YPSE349747 YPSIP31758_0122YPSIP31758_0120YPSIP31758_0123YPSIP31758_0121
YPSE273123 YPTB0106YPTB0104YPTB0107YPTB0105
YPES386656 YPDSF_3791YPDSF_3793YPDSF_3790YPDSF_3792
YPES377628 YPN_3738YPN_3741YPN_3737YPN_3740
YPES360102 YPA_0265YPA_0262YPA_0266YPA_0263
YPES349746 YPANGOLA_A3806YPANGOLA_A3808YPANGOLA_A3805YPANGOLA_A3807
YPES214092 YPO0116YPO0114YPO0117
YPES187410 Y0303Y0301Y0304
YENT393305 YE0112YE0110YE0114YE0111
XORY360094 XOOORF_2429XOOORF_1092XOOORF_3183
XORY342109 XOO2107XOO3591XOO1717
XORY291331 XOO2242XOO3810XOO1818
XFAS405440 XFASM12_1425XFASM12_0466XFASM12_1985
XFAS183190 PD_1273PD_0413PD_1812
XFAS160492 XF2225XF1121XF0864
XCAM487884 XCC-B100_2087XCC-B100_3616XCC-B100_1298
XCAM316273 XCAORF_2051XCAORF_0909XCAORF_3233
XCAM314565 XC_2389XC_3496XC_1252
XCAM190485 XCC1800XCC0739XCC2856
XAXO190486 XAC1820XAC0791XAC3039
VVUL216895 VV1_1365VV1_1362VV1_1366VV1_1364
VVUL196600 VV3007VV3009VV3006VV3008
VPAR223926 VP2764VP2766VP2763VP2765
VFIS312309 VF2266VF2268VF2309VF2267
VCHO345073 VC0395_A2257VC0395_A2255VC0395_A2258VC0395_A2256
VCHO VC2684VC2682VC2685VC2683
STYP99287 STM4101STM4099STM4105STM4100
STHE292459 STH1548STH2502STH2363
SSP94122 SHEWANA3_3613SHEWANA3_3615SHEWANA3_3612SHEWANA3_3614
SSON300269 SSO_4114SSO_4112SSO_4115SSO_4113
SSED425104 SSED_4040SSED_4042SSED_4039SSED_4041
SRUB309807 SRU_0691SRU_2094SRU_1161
SPRO399741 SPRO_4785SPRO_4787SPRO_4784SPRO_4786
SPEA398579 SPEA_0561SPEA_0559SPEA_0562SPEA_0560
SONE211586 SO_4055SO_4057SO_4054SO_4056
SLOI323850 SHEW_0521SHEW_0519SHEW_0522SHEW_0520
SHIGELLA METLMETJMETFMETB
SHAL458817 SHAL_0623SHAL_0621SHAL_0624SHAL_0622
SGLO343509 SG0404SG2164SG2162SG2163
SFLE373384 SFV_4010SFV_4008SFV_4011SFV_4009
SFLE198214 AAN45451.1AAN45449.1AAN45452.1AAN45450.1
SENT454169 SEHA_C4435SEHA_C4433SEHA_C4440SEHA_C4434
SENT321314 SCH_3992SCH_3990SCH_3997SCH_3991
SENT295319 SPA3944SPA3942SPA3951SPA3943
SENT220341 STY3768STY3770STY3761STY3769
SENT209261 T3517T3519T3511T3518
SDYS300267 SDY_3775SDY_3773SDY_3776SDY_3774
SDEN318161 SDEN_0616SDEN_0614SDEN_0642SDEN_0615
SBOY300268 SBO_3960SBO_3958SBO_3961SBO_3959
SBAL402882 SHEW185_0537SHEW185_0535SHEW185_0538SHEW185_0536
SBAL399599 SBAL195_0561SBAL195_0559SBAL195_0562SBAL195_0560
RSP357808 ROSERS_3079ROSERS_2032ROSERS_1055
RCAS383372 RCAS_3187RCAS_3006RCAS_3473
PPRO298386 PBPRA0262PBPRA0260PBPRA0263PBPRA0261
PMUL272843 PM0113PM1290PM0235PM0995
PLUT319225 PLUT_1983PLUT_1347PLUT_1548
PLUM243265 PLU4755PLU4757PLU4754PLU4756
PHAL326442 PSHAA2722PSHAA2724PSHAA2723
PATL342610 PATL_3580PATL_3956PATL_3955
MXAN246197 MXAN_2278MXAN_3039MXAN_2035
MSUC221988 MS1703MS1966MS0787MS1627
MMAR394221 MMAR10_1098MMAR10_2438MMAR10_2620
KPNE272620 GKPORF_B3579GKPORF_B3577GKPORF_B3583GKPORF_B3578
ILOI283942 IL2466IL2465IL0219
HSOM228400 HSM_0349HSM_0768HSM_1047HSM_0277
HSOM205914 HS_1214HS_0469HS_1130HS_1345
HMOD498761 HM1_2331HM1_1450HM1_1731
HINF71421 HI_0089HI_0294HI_1444HI_0086
HINF374930 CGSHIEE_02840CGSHIEE_01585CGSHIEE_04820CGSHIEE_02855
HINF281310 NTHI0167NTHI0404NTHI1686NTHI0100
GFOR411154 GFO_1970GFO_0334GFO_3443
FJOH376686 FJOH_1494FJOH_1511FJOH_0710
ESP42895 ENT638_4034ENT638_4036ENT638_4033ENT638_4035
EFER585054 EFER_3831EFER_3833EFER_3821EFER_3832
ECOO157 METLMETJMETFMETB
ECOL83334 ECS4869ECS4867ECS4870ECS4868
ECOL585397 ECED1_4643ECED1_4640ECED1_4647ECED1_4642
ECOL585057 ECIAI39_3054ECIAI39_3056ECIAI39_3047ECIAI39_3055
ECOL585056 ECUMN_4470ECUMN_4468ECUMN_4473ECUMN_4469
ECOL585055 EC55989_4422EC55989_4420EC55989_4424EC55989_4421
ECOL585035 ECS88_4391ECS88_4388ECS88_4397ECS88_4390
ECOL585034 ECIAI1_4149ECIAI1_4147ECIAI1_4150ECIAI1_4148
ECOL481805 ECOLC_4075ECOLC_4077ECOLC_4074ECOLC_4076
ECOL469008 ECBD_4083ECBD_4085ECBD_4082ECBD_4084
ECOL439855 ECSMS35_4382ECSMS35_4380ECSMS35_4389ECSMS35_4381
ECOL413997 ECB_03826ECB_03824ECB_03827ECB_03825
ECOL409438 ECSE_4234ECSE_4232ECSE_4235ECSE_4233
ECOL405955 APECO1_2531APECO1_2533APECO1_2525APECO1_2532
ECOL364106 UTI89_C4525UTI89_C4523UTI89_C4531UTI89_C4524
ECOL362663 ECP_4149ECP_4147ECP_4155ECP_4148
ECOL331111 ECE24377A_4480ECE24377A_4478ECE24377A_4481ECE24377A_4479
ECOL316407 ECK3932:JW3911:B3940ECK3930:JW3909:B3938ECK3933:JW3913:B3941ECK3931:JW3910:B3939
ECOL199310 C4893C4891C4899C4892
ECAR218491 ECA4251ECA4253ECA4244ECA4252
CTEP194439 CT_2030CT_1368CT_0701
CPSY167879 CPS_0456CPS_0454CPS_0455
CPHY357809 CPHY_3600CPHY_3110CPHY_1227
CCHL340177 CAG_0142CAG_1108CAG_1264
CBOT515621 CLJ_B3619CLJ_B1732CLJ_B0792
CBLO291272 BPEN_115BPEN_619BPEN_620
CBLO203907 BFL111BFL597BFL598
ASAL382245 ASA_3796ASA_3794ASA_3795
APLE416269 APL_0250APL_1917APL_0854
AHYD196024 AHA_0590AHA_0588AHA_3949AHA_0589
ADEH290397 ADEH_1400ADEH_2676ADEH_3143
ABAC204669 ACID345_1482ACID345_3426ACID345_2499


Organism features enriched in list (features available for 102 out of the 106 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0001957592
Arrangment:Pairs 0.002215530112
Arrangment:Singles 0.002911062286
Disease:Bubonic_plague 0.000025366
Disease:Dysentery 0.000025366
Disease:Gastroenteritis 3.112e-61013
Disease:Rice_bacterial_blight_disease 0.005225833
Disease:chronic_bronchitis 0.005225833
Endospores:No 0.003997026211
GC_Content_Range4:0-40 4.136e-913213
GC_Content_Range4:40-60 1.794e-1575224
GC_Content_Range4:60-100 0.001281914145
GC_Content_Range7:30-40 5.326e-710166
GC_Content_Range7:40-50 0.001076232117
GC_Content_Range7:50-60 2.387e-1043107
GC_Content_Range7:60-70 0.002143013134
Genome_Size_Range5:0-2 8.940e-105155
Genome_Size_Range5:2-4 0.000042218197
Genome_Size_Range5:4-6 3.757e-2376184
Genome_Size_Range9:1-2 4.640e-93128
Genome_Size_Range9:2-3 0.004946212120
Genome_Size_Range9:3-4 0.0057142677
Genome_Size_Range9:4-5 3.252e-83796
Genome_Size_Range9:5-6 6.504e-113988
Gram_Stain:Gram_Neg 1.753e-1794333
Gram_Stain:Gram_Pos 1.983e-122150
Motility:No 1.527e-86151
Motility:Yes 1.933e-770267
Optimal_temp.:20-30 0.000147867
Oxygen_Req:Aerobic 0.000232218185
Oxygen_Req:Anaerobic 0.00049827102
Oxygen_Req:Facultative 2.453e-1773201
Pathogenic_in:Human 0.008214647213
Pathogenic_in:No 0.000168224226
Pathogenic_in:Plant 0.0063528715
Pathogenic_in:Rice 0.005225833
Shape:Rod 1.012e-1594347
Temp._range:Mesophilic 0.007107391473
Temp._range:Psychrophilic 0.009104159



Back to top


ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 389
Effective number of orgs (counting one per cluster within 468 clusters): 305

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM41
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79011
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.1
TSP1755 Thermoanaerobacter sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252591
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 71
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96051
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SMUT210007 ncbi Streptococcus mutans UA1591
SMED366394 ncbi Sinorhizobium medicae WSM4191
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis1
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEG203122 ncbi Saccharophagus degradans 2-401
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170291
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.11
RSOL267608 ncbi Ralstonia solanacearum GMI10001
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-31
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38411
RFER338969 ncbi Rhodoferax ferrireducens T1181
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H161
REUT264198 ncbi Ralstonia eutropha JMP1341
RETL347834 ncbi Rhizobium etli CFN 421
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30001
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a1
PSTU379731 ncbi Pseudomonas stutzeri A15011
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ21
PMEN399739 ncbi Pseudomonas mendocina ymp1
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
OCAR504832 ncbi Oligotropha carboxidovorans OM51
OANT439375 ncbi Ochrobactrum anthropi ATCC 491881
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197071
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NEUT335283 ncbi Nitrosomonas eutropha C911
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC11
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM11
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT1
MEXT419610 ncbi Methylobacterium extorquens PA11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath1
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT81
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LINN272626 ncbi Listeria innocua Clip112621
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LCHO395495 ncbi Leptothrix cholodnii SP-61
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille1
JSP290400 ncbi Jannaschia sp. CCS11
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HHAL349124 ncbi Halorhodospira halophila SL11
HCHE349521 ncbi Hahella chejuensis KCTC 23961
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans1
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf41
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GOXY290633 ncbi Gluconobacter oxydans 621H1
GMET269799 ncbi Geobacter metallireducens GS-151
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-001
FTUL418136 ncbi Francisella tularensis tularensis WY96-34181
FTUL401614 ncbi Francisella novicida U1121
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25941
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
DRAD243230 ncbi Deinococcus radiodurans R11
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
DNOD246195 ncbi Dichelobacter nodosus VCS1703A1
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
DARO159087 ncbi Dechloromonas aromatica RCB1
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CSP501479 Citreicella sp. SE451
CSAL290398 ncbi Chromohalobacter salexigens DSM 30431
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJAP155077 Cellvibrio japonicus1
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BVIE269482 ncbi Burkholderia vietnamiensis G41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHA271848 ncbi Burkholderia thailandensis E2641
BSUI470137 ncbi Brucella suis ATCC 234451
BSUI204722 ncbi Brucella suis 13301
BSP376 Bradyrhizobium sp.1
BSP36773 Burkholderia sp.1
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BPSE320373 ncbi Burkholderia pseudomallei 6681
BPSE320372 ncbi Burkholderia pseudomallei 1710b1
BPSE272560 ncbi Burkholderia pseudomallei K962431
BPET94624 Bordetella petrii1
BPER257313 ncbi Bordetella pertussis Tohama I1
BPAR257311 ncbi Bordetella parapertussis 128221
BOVI236 Brucella ovis1
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M1
BMAL320389 ncbi Burkholderia mallei NCTC 102471
BMAL320388 ncbi Burkholderia mallei SAVP11
BMAL243160 ncbi Burkholderia mallei ATCC 233441
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BCER405917 Bacillus cereus W1
BCER288681 ncbi Bacillus cereus E33L1
BCER226900 ncbi Bacillus cereus ATCC 145791
BCEN331272 ncbi Burkholderia cenocepacia HI24241
BCEN331271 ncbi Burkholderia cenocepacia AU 10541
BCAN483179 ncbi Brucella canis ATCC 233651
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC360095 ncbi Bartonella bacilliformis KC5830
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor1
BANT260799 ncbi Bacillus anthracis Sterne1
BAMB398577 ncbi Burkholderia ambifaria MC40-61
BAMB339670 ncbi Burkholderia ambifaria AMMD1
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN11
ASP62977 ncbi Acinetobacter sp. ADP11
ASP62928 ncbi Azoarcus sp. BH721
ASP232721 ncbi Acidovorax sp. JS421
APHA212042 ncbi Anaplasma phagocytophilum HZ0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232701
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ACAU438753 ncbi Azorhizobium caulinodans ORS 5711
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK21
ABAU360910 ncbi Bordetella avium 197N1
AAVE397945 ncbi Acidovorax citrulli AAC00-11
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  EG10590   EG10588   EG10585   EG10582   
ZMOB264203 ZMO1747
XAUT78245 XAUT_2831
WSUC273121
WPIP955
WPIP80849
VEIS391735 VEIS_0654
UURE95667
UURE95664
UPAR505682
UMET351160 LRC427
TWHI218496
TWHI203267
TVOL273116
TTUR377629 TERTU_3978
TTEN273068 TTE1804
TSP28240 TRQ2_1412
TSP1755 TETH514_1210
TROS309801 TRD_A0414
TPSE340099 TETH39_0696
TPET390874 TPET_1274
TPEN368408
TPAL243276
TMAR243274 TM_1518
TKOD69014
TERY203124
TELO197221
TDEN326298
TDEN292415 TBD_2517
TDEN243275
TCRU317025 TCR_1822
TACI273075
STOK273063 ST1241
SSP84588
SSP64471 GSYN0654
SSP387093
SSP321332
SSP321327
SSP1148
SSP1131 SYNCC9605_0071
SSAP342451 SSP0253
SPYO370554 MGAS10750_SPY0152
SPYO370553
SPYO370552 MGAS10270_SPY0148
SPYO370551 MGAS9429_SPY0148
SPYO319701 M28_SPY0144
SPYO293653 M5005_SPY0146
SPYO286636 M6_SPY0192
SPYO198466 SPYM3_0133
SPYO193567 SPS0136
SPYO186103 SPYM18_0170
SPYO160490 SPY0172
SMUT210007 SMU_1675
SMED366394 SMED_2115
SMAR399550
SLAC55218 SL1157_2051
SHAE279808 SH2548
SFUM335543 SFUM_2670
SEPI176280 SE_2323
SEPI176279 SERP0095
SELO269084
SDEG203122 SDE_0468
SAUR93062 SACOL0503
SAUR93061 SAOUHSC_00422
SAUR426430 NWMN_0425
SAUR418127 SAHV_0458
SAUR367830 SAUSA300_0434
SAUR359787 SAURJH1_0495
SAUR359786 SAURJH9_0482
SAUR282459 SAS0418
SAUR282458 SAR0460
SAUR273036 SAB0410
SAUR196620 MW0415
SAUR158879 SA0419
SAUR158878
SALA317655 SALA_0035
SAGA211110
SAGA208435
SAGA205921
SACI56780 SYN_02781
SACI330779 SACI_1412
RTYP257363
RSPH349102 RSPH17025_2321
RSPH349101 RSPH17029_0844
RSPH272943 RSP_2172
RSOL267608 RSC0091
RRIC452659
RRIC392021
RPRO272947
RPOM246200 SPO_3016
RPAL316057 RPD_3540
RPAL316056 RPC_3734
RPAL316055 RPE_3772
RMET266264 RMET_0172
RMAS416276
RLEG216596 RL3331
RFER338969 RFER_0654
RFEL315456
REUT381666 H16_A0246
REUT264198 REUT_A0215
RETL347834 RHE_CH02871
RDEN375451 RD1_1762
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_2297
RAKA293614
PTOR263820
PSYR223283 PSPTO_5069
PSYR205918 PSYR_0459
PSTU379731 PST_3936
PSP56811 PSYCPRWF_0914
PSP312153 PNUC_2001
PPEN278197
PNAP365044 PNAP_0491
PMEN399739 PMEN_0448
PMAR93060
PMAR74547 PMT0226
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542 P9515ORF_0504
PMAR167540
PMAR167539
PMAR146891
PISL384616 PISL_0273
PINT246198 PIN_A1617
PHOR70601
PGIN242619 PG_2189
PFUR186497
PCRY335284 PCRYO_1449
PAST100379
PARS340102 PARS_0958
PARC259536 PSYC_0967
PAER178306 PAE2877
PACN267747
PABY272844
OTSU357244
OIHE221109 OB1109
OCAR504832 OCAR_7438
OANT439375 OANT_1723
NSP387092
NSP103690
NSEN222891
NPHA348780 NP4746A
NOCE323261 NOC_2680
NMUL323848 NMUL_A2539
NEUT335283 NEUT_1891
NEUR228410 NE0661
NARO279238 SARO_3208
MVAN350058 MVAN_4670
MTUB419947 MRA_1089
MTUB336982 TBFG_11097
MTHE349307 MTHE_1253
MTHE264732 MOTH_1989
MTHE187420
MTBRV RV1079
MTBCDC MT1110
MSYN262723
MSTA339860
MSP400668
MSP266779 MESO_2028
MSP189918 MKMS_4221
MSP164757 MJLS_4377
MSP164756 MMCS_4146
MSME246196 MSMEG_5265
MSED399549 MSED_1699
MPUL272635
MPNE272634
MPET420662 MPE_A3288
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM1417
MMAR444158 MMARC6_1642
MMAR426368 MMARC7_0259
MMAR402880 MMARC5_0577
MMAR368407 MEMAR_0222
MMAR267377 MMP1017
MMAG342108
MLEP272631 ML2394
MLAB410358 MLAB_0142
MKAN190192 MK0109
MJAN243232 MJ_0571
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_3054
MGIL350054 MFLV_2046
MGEN243273
MFLO265311
MFLA265072 MFLA_0191
MEXT419610 MEXT_1600
MCAP340047
MCAP243233 MCA_0137
MBUR259564 MBUR_1980
MBOV410289 BCG_1137
MBOV233413 MB1108
MBAR269797 MBAR_A0861
MAVI243243 MAV_1203
MART243272
MAQU351348 MAQU_3044
MAER449447
MAEO419665 MAEO_0676
MACE188937 MA0131
LXYL281090 LXX03230
LSPH444177 BSPH_3397
LSAK314315
LREU557436 LREU_0293
LPLA220668 LP_0255
LMON265669 LMOF2365_1703
LMON169963 LMO1679
LJOH257314
LINT363253
LINT267671 LIC_20002
LINT189518 LB002
LINN272626 LIN1787
LGAS324831
LDEL390333 LDB1326
LCHO395495 LCHO_0117
LCAS321967 LSEI_0624
LBRE387344
LBOR355277 LBJ_4004
LBOR355276 LBL_4004
LACI272621
JSP375286 MMA_3194
JSP290400 JANN_1026
IHOS453591
HWAL362976
HSP64091 VNG1172G
HSAL478009 OE2681F
HPYL85963 JHP0098
HPYL357544 HPAG1_0106
HPY HP0106
HNEP81032 HNE_2103
HMUK485914
HMAR272569 RRNAC2414
HHEP235279 HH_0062
HHAL349124 HHAL_1674
HCHE349521 HCH_01531
HBUT415426
HARS204773 HEAR2948
HACI382638 HAC_1464
GVIO251221
GURA351605 GURA_3858
GTHE420246 GTNG_2473
GSUL243231 GSU_0944
GOXY290633 GOX2207
GMET269799 GMET_0698
GKAU235909 GK2540
GBET391165 GBCGDNIH1_0206
FTUL458234 FTA_0521
FTUL418136 FTW_1648
FTUL401614 FTN_0525
FTUL393115
FTUL393011
FTUL351581
FRANT
FPHI484022 FPHI_0313
FNUC190304 FN1419
FNOD381764 FNOD_1279
FMAG334413
ERUM302409
ERUM254945
ELIT314225 ELI_10095
EFAE226185 EF_0290
ECHA205920
ECAN269484
DVUL882 DVU_0997
DSP255470
DSP216389
DSHI398580 DSHI_2080
DRAD243230 DR_1365
DPSY177439 DP1612
DOLE96561 DOLE_2330
DNOD246195 DNO_0863
DGEO319795 DGEO_0011
DETH243164
DDES207559 DDE_2525
DARO159087 DARO_0183
CVES412965 COSY_0776
CTRA471473 CTLON_0614
CTRA471472 CTL0616
CTET212717 CTC_02530
CSUL444179 SMGWSS_141
CSP501479 CSE45_1962
CSAL290398 CSAL_0396
CRUT413404 RMAG_0851
CPRO264201 PC0765
CPNE182082 CPB1090
CPNE138677 CPJ1049
CPNE115713 CPN1049
CPNE115711 CP_0803
CPER289380 CPR_0165
CPER195103 CPF_0169
CPER195102 CPE0176
CPEL335992
CNOV386415
CMUR243161 TC_0641
CMIC443906 CMM_0873
CMIC31964 CMS0128
CMAQ397948
CKOR374847
CKLU431943 CKL_1002
CJEJ407148 C8J_1146
CJEJ360109 JJD26997_0527
CJEJ354242 CJJ81176_1217
CJEJ195099 CJE_1336
CJEJ192222 CJ1202
CJAP155077 CJA_0205
CHOM360107
CFET360106
CFEL264202 CF0305
CDIP257309 DIP1611
CDIF272563
CDES477974 DAUD_1075
CCUR360105
CCON360104
CCAV227941 CCA_00713
CABO218497 CAB678
BXEN266265
BVIE269482 BCEP1808_0234
BTUR314724
BTRI382640
BTHU412694 BALH_3957
BTHU281309 BT9727_4105
BTHA271848 BTH_I3163
BSUI470137 BSUIS_A1503
BSUI204722 BR_1450
BSP376 BRADO0995
BSP36773 BCEP18194_A3377
BQUI283165
BPUM315750 BPUM_2360
BPSE320373 BURPS668_3836
BPSE320372 BURPS1710B_A0062
BPSE272560 BPSL3288
BPET94624 BPET4761
BPER257313 BP3066
BPAR257311 BPP0197
BOVI236 GBOORF1464
BMEL359391 BAB1_1468
BMEL224914 BMEI0559
BMAL320389 BMA10247_3136
BMAL320388 BMASAVP1_A3415
BMAL243160 BMA_2840
BJAP224911 BLL1419
BHER314723
BHEN283166
BGAR290434
BCER405917 BCE_4454
BCER288681 BCE33L4116
BCER226900 BC_4366
BCEN331272 BCEN2424_0274
BCEN331271 BCEN_2833
BCAN483179 BCAN_A1485
BBUR224326
BBRO257310 BB0200
BBAC360095
BANT592021 BAA_4620
BANT568206 BAMEG_4637
BANT261594 GBAA4600
BANT260799 BAS4268
BAMB398577 BAMMC406_0201
BAMB339670 BAMB_0188
BAFZ390236
BABO262698 BRUAB1_1445
AYEL322098
AVAR240292 AVA_4155
AURANTIMONAS
ASP76114 EBA1875
ASP62977 ACIAD2283
ASP62928 AZO0584
ASP232721 AJS_0620
APHA212042
AMAR329726
AMAR234826
ALAI441768
AFUL224325 AF_0700
AFER243159 AFE_2503
ACRY349163 ACRY_0219
ACEL351607 ACEL_0991
ACAU438753 AZC_4340
ABUT367737
ABOR393595 ABO_2619
ABAU360910 BAV0163
AAVE397945 AAVE_4058
AAUR290340 AAUR_3037
AAEO224324 AQ_1429


Organism features enriched in list (features available for 365 out of the 389 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.001606757112
Arrangment:Singles 0.0015674163286
Disease:Gastroenteritis 0.0034521313
Disease:None 0.00360942758
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00547031111
Disease:Wide_range_of_infections 0.00547031111
Endospores:No 0.0000628153211
Endospores:Yes 0.00056602253
GC_Content_Range4:0-40 7.278e-7160213
GC_Content_Range4:40-60 7.948e-7113224
GC_Content_Range7:30-40 8.939e-6126166
GC_Content_Range7:40-50 0.007933663117
GC_Content_Range7:50-60 0.000091550107
GC_Content_Range7:70-100 0.0028580211
Genome_Size_Range5:0-2 5.234e-19140155
Genome_Size_Range5:4-6 3.698e-1474184
Genome_Size_Range9:1-2 1.881e-17118128
Genome_Size_Range9:4-5 2.768e-64096
Genome_Size_Range9:5-6 4.467e-73488
Gram_Stain:Gram_Neg 0.0000336186333
Habitat:Aquatic 0.00297296891
Habitat:Host-associated 0.0046559142206
Habitat:Multiple 1.255e-686178
Motility:No 0.0000974113151
Motility:Yes 0.0005341149267
Optimal_temp.:30-37 0.00018591818
Oxygen_Req:Facultative 4.670e-896201
Shape:Coccus 0.00553186182
Shape:Irregular_coccus 0.00321111617
Shape:Rod 2.977e-7189347
Shape:Sphere 0.00136301819
Shape:Spiral 0.00054723034
Temp._range:Mesophilic 0.0043198285473



Back to top


ORGANISMS ENRICHED FOR GROUP:




Back to top


ORGANISMS DEPLETED FOR GROUP:




Back to top


PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50420.5266
GALACTITOLCAT-PWY (galactitol degradation)73500.4991
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45350.4512
AST-PWY (arginine degradation II (AST pathway))120610.4396
THREONINE-DEG2-PWY (threonine degradation II)214840.4281
PWY0-1182 (trehalose degradation II (trehalase))70430.4205
PWY-6507 (5-dehydro-4-deoxy-D-glucuronate degradation)76450.4186
GLYCOCAT-PWY (glycogen degradation I)246890.4120
HEXITOLDEGSUPER-PWY (superpathway of hexitol degradation)37290.4104
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96510.4102
LYXMET-PWY (L-lyxose degradation)87480.4091
PWY-5921 (L-glutamine biosynthesis II (tRNA-dependent))40120-.4302



Back to top


PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10588   EG10585   EG10582   
EG105900.99920.998830.999174
EG105880.9989710.999327
EG105850.998688
EG10582



Back to top


PAIRWISE BLAST SCORES:

  EG10590   EG10588   EG10585   EG10582   
EG105900.0f0---
EG10588-0.0f0--
EG10585--0.0f0-
EG10582---0.0f0



Back to top


PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- MET-SAM-PWY (superpathway of S-adenosyl-L-methionine biosynthesis) (degree of match pw to cand: 0.222, degree of match cand to pw: 0.500, average score: 0.716)
  Genes in pathway or complex:
             0.7161 0.1658 EG10088 (asd) ASP-SEMIALDEHYDE-DEHYDROGENASE-MONOMER (Asd)
   *in cand* 0.9993 0.9988 EG10590 (metL) ASPKINIIHOMOSERDEHYDROGII-MONOMER (MetL)
             0.9720 0.9634 EG10581 (metA) HOMSUCTRAN-MONOMER (MetA)
             0.9762 0.9492 EG10584 (metE) HOMOCYSMET-MONOMER (cobalamin-independent homocysteine transmethylase)
             0.9874 0.9807 EG10587 (metH) HOMOCYSMETB12-MONOMER (cobalamin-dependent methionine synthase)
             0.5364 0.1474 EG10583 (metC) CYSTATHIONINE-BETA-LYASE-MONOMER (MetC)
             0.2894 0.0414 EG10564 (malY) EG10564-MONOMER (bifunctional β-cystathionase, PLP-dependent and regulator of maltose regulon)
   *in cand* 0.9993 0.9987 EG10582 (metB) O-SUCCHOMOSERLYASE-MONOMER (MetB)
             0.7348 0.5170 EG10589 (metK) S-ADENMETSYN-MONOMER (methionine adenosyltransferase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9987 EG10585 (metF) METHYLENETHFREDUCT-MONOMER (MetF)
   *in cand* 0.9994 0.9990 EG10588 (metJ) PD04032 (MetJ transcriptional repressor)

- P4-PWY (superpathway of lysine, threonine and methionine biosynthesis I) (degree of match pw to cand: 0.100, degree of match cand to pw: 0.500, average score: 0.677)
  Genes in pathway or complex:
             0.0327 0.0284 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.7450 0.4030 EG10999 (thrB) HOMOSERKIN-MONOMER (ThrB)
             0.6566 0.1564 EG11000 (thrC) THRESYN-MONOMER (threonine synthase)
             0.8860 0.8435 EG10998 (thrA) ASPKINIHOMOSERDEHYDROGI-MONOMER (ThrA)
   *in cand* 0.9993 0.9988 EG10590 (metL) ASPKINIIHOMOSERDEHYDROGII-MONOMER (MetL)
             0.9783 0.9568 EG10550 (lysC) ASPKINIII-MONOMER (LysC)
             0.7161 0.1658 EG10088 (asd) ASP-SEMIALDEHYDE-DEHYDROGENASE-MONOMER (Asd)
             0.4128 0.0015 EG10205 (dapA) DIHYDRODIPICSYN-MONOMER (DapA)
             0.6244 0.2322 EG10206 (dapB) DIHYDROPICRED-MONOMER (DapB)
             0.4193 0.0014 EG10207 (dapD) MONOMER0-2001 (tetrahydrodipicolinate succinylase subunit)
             0.8790 0.8467 EG10066 (argD) ACETYLORNTRANSAM-MONOMER (ArgD)
             0.2073 0.0031 EG10208 (dapE) MONOMER0-1981 (N-succinyl-L-diaminopimelate desuccinylase subunit)
             0.9209 0.8476 EG10549 (lysA) DIAMINOPIMDECARB-MONOMER (LysA)
             0.9892 0.9819 EG10209 (dapF) DIAMINOPIMEPIM-MONOMER (diaminopimelate epimerase)
   *in cand* 0.9993 0.9987 EG10582 (metB) O-SUCCHOMOSERLYASE-MONOMER (MetB)
             0.2894 0.0414 EG10564 (malY) EG10564-MONOMER (bifunctional β-cystathionase, PLP-dependent and regulator of maltose regulon)
             0.5364 0.1474 EG10583 (metC) CYSTATHIONINE-BETA-LYASE-MONOMER (MetC)
             0.9874 0.9807 EG10587 (metH) HOMOCYSMETB12-MONOMER (cobalamin-dependent methionine synthase)
             0.9762 0.9492 EG10584 (metE) HOMOCYSMET-MONOMER (cobalamin-independent homocysteine transmethylase)
             0.9720 0.9634 EG10581 (metA) HOMSUCTRAN-MONOMER (MetA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9987 EG10585 (metF) METHYLENETHFREDUCT-MONOMER (MetF)
   *in cand* 0.9994 0.9990 EG10588 (metJ) PD04032 (MetJ transcriptional repressor)

- PWY0-781 (aspartate superpathway) (degree of match pw to cand: 0.077, degree of match cand to pw: 0.500, average score: 0.657)
  Genes in pathway or complex:
             0.9720 0.9634 EG10581 (metA) HOMSUCTRAN-MONOMER (MetA)
             0.9762 0.9492 EG10584 (metE) HOMOCYSMET-MONOMER (cobalamin-independent homocysteine transmethylase)
             0.9874 0.9807 EG10587 (metH) HOMOCYSMETB12-MONOMER (cobalamin-dependent methionine synthase)
             0.5364 0.1474 EG10583 (metC) CYSTATHIONINE-BETA-LYASE-MONOMER (MetC)
             0.2894 0.0414 EG10564 (malY) EG10564-MONOMER (bifunctional β-cystathionase, PLP-dependent and regulator of maltose regulon)
   *in cand* 0.9993 0.9987 EG10582 (metB) O-SUCCHOMOSERLYASE-MONOMER (MetB)
             0.9892 0.9819 EG10209 (dapF) DIAMINOPIMEPIM-MONOMER (diaminopimelate epimerase)
             0.9209 0.8476 EG10549 (lysA) DIAMINOPIMDECARB-MONOMER (LysA)
             0.2073 0.0031 EG10208 (dapE) MONOMER0-1981 (N-succinyl-L-diaminopimelate desuccinylase subunit)
             0.8790 0.8467 EG10066 (argD) ACETYLORNTRANSAM-MONOMER (ArgD)
             0.4193 0.0014 EG10207 (dapD) MONOMER0-2001 (tetrahydrodipicolinate succinylase subunit)
             0.6244 0.2322 EG10206 (dapB) DIHYDROPICRED-MONOMER (DapB)
             0.4128 0.0015 EG10205 (dapA) DIHYDRODIPICSYN-MONOMER (DapA)
             0.7161 0.1658 EG10088 (asd) ASP-SEMIALDEHYDE-DEHYDROGENASE-MONOMER (Asd)
             0.9783 0.9568 EG10550 (lysC) ASPKINIII-MONOMER (LysC)
   *in cand* 0.9993 0.9988 EG10590 (metL) ASPKINIIHOMOSERDEHYDROGII-MONOMER (MetL)
             0.8860 0.8435 EG10998 (thrA) ASPKINIHOMOSERDEHYDROGI-MONOMER (ThrA)
             0.6566 0.1564 EG11000 (thrC) THRESYN-MONOMER (threonine synthase)
             0.7450 0.4030 EG10999 (thrB) HOMOSERKIN-MONOMER (ThrB)
             0.0327 0.0284 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.6519 0.1896 EG10631 (nadB) L-ASPARTATE-OXID-MONOMER (L-aspartate oxidase)
             0.3029 0.0418 EG10630 (nadA) QUINOLINATE-SYNTHA-MONOMER (NadA)
             0.6812 0.3303 EG11546 (nadC) QUINOPRIBOTRANS-MONOMER (quinolinate phosphoribosyltransferase (decarboxylating) monomer)
             0.2181 0.0674 EG10663 (nadE) NAD-SYNTH-MONOMER (NadE)
             0.4964 0.0580 G6350 (nadD) NICONUCADENYLYLTRAN-MONOMER (nicotinate-mononucleotide adenylyltransferase)
             0.7348 0.5170 EG10589 (metK) S-ADENMETSYN-MONOMER (methionine adenosyltransferase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9987 EG10585 (metF) METHYLENETHFREDUCT-MONOMER (MetF)
   *in cand* 0.9994 0.9990 EG10588 (metJ) PD04032 (MetJ transcriptional repressor)

- METSYN-PWY (homoserine and methionine biosynthesis) (degree of match pw to cand: 0.250, degree of match cand to pw: 0.500, average score: 0.732)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9987 EG10582 (metB) O-SUCCHOMOSERLYASE-MONOMER (MetB)
             0.2894 0.0414 EG10564 (malY) EG10564-MONOMER (bifunctional β-cystathionase, PLP-dependent and regulator of maltose regulon)
             0.5364 0.1474 EG10583 (metC) CYSTATHIONINE-BETA-LYASE-MONOMER (MetC)
             0.9874 0.9807 EG10587 (metH) HOMOCYSMETB12-MONOMER (cobalamin-dependent methionine synthase)
             0.9762 0.9492 EG10584 (metE) HOMOCYSMET-MONOMER (cobalamin-independent homocysteine transmethylase)
             0.9720 0.9634 EG10581 (metA) HOMSUCTRAN-MONOMER (MetA)
   *in cand* 0.9993 0.9988 EG10590 (metL) ASPKINIIHOMOSERDEHYDROGII-MONOMER (MetL)
             0.7161 0.1658 EG10088 (asd) ASP-SEMIALDEHYDE-DEHYDROGENASE-MONOMER (Asd)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9987 EG10585 (metF) METHYLENETHFREDUCT-MONOMER (MetF)
   *in cand* 0.9994 0.9990 EG10588 (metJ) PD04032 (MetJ transcriptional repressor)



Back to top


GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10582 EG10585 EG10588 EG10590 (centered at EG10590)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10590   EG10588   EG10585   EG10582   
198/62381/623331/623298/623
AAEO224324:0:Tyes--0-
AAUR290340:2:Tyes---0
AAVE397945:0:Tyes--0-
ABAC204669:0:Tyes0-19581026
ABAU360910:0:Tyes--0-
ABOR393595:0:Tyes--0-
ACAU438753:0:Tyes--0-
ACEL351607:0:Tyes--0-
ACRY349163:8:Tyes--0-
ADEH290397:0:Tyes0-12931760
AEHR187272:0:Tyes--6450
AFER243159:0:Tyes--0-
AFUL224325:0:Tyes0---
AHYD196024:0:Tyes2032381
AMET293826:0:Tyes--0324
ANAE240017:0:Tyes--01139
AORE350688:0:Tyes--0985
APER272557:0:Tyes0--90
APLE416269:0:Tyes01711605-
APLE434271:0:Tno-11490-
ASAL382245:5:Tyes20-1
ASP1667:3:Tyes--0713
ASP232721:2:Tyes--0-
ASP62928:0:Tyes--0-
ASP62977:0:Tyes--0-
ASP76114:2:Tyes--0-
AVAR240292:3:Tyes---0
BABO262698:1:Tno--0-
BAMB339670:3:Tno--0-
BAMB398577:3:Tno--0-
BAMY326423:0:Tyes0--774
BANT260799:0:Tno---0
BANT261594:2:Tno---0
BANT568206:2:Tyes---0
BANT592021:2:Tno---0
BAPH198804:0:Tyes145-0-
BAPH372461:0:Tyes96-0-
BBAC264462:0:Tyes0--3382
BBRO257310:0:Tyes--0-
BCAN483179:1:Tno--0-
BCEN331271:2:Tno--0-
BCEN331272:3:Tyes--0-
BCER226900:1:Tyes---0
BCER288681:0:Tno---0
BCER315749:1:Tyes0--620
BCER405917:1:Tyes---0
BCER572264:1:Tno0--2637
BCIC186490:0:Tyes--01
BCLA66692:0:Tyes270--0
BFRA272559:1:Tyes0-3280-
BFRA295405:0:Tno0-3539-
BHAL272558:0:Tyes772--0
BJAP224911:0:Fyes--0-
BLIC279010:0:Tyes143--0
BLON206672:0:Tyes--0359
BMAL243160:1:Tno--0-
BMAL320388:1:Tno--0-
BMAL320389:1:Tyes--0-
BMEL224914:1:Tno--0-
BMEL359391:1:Tno--0-
BOVI236:1:Tyes--0-
BPAR257311:0:Tno--0-
BPER257313:0:Tyes--0-
BPET94624:0:Tyes--0-
BPSE272560:1:Tyes--0-
BPSE320372:1:Tno--0-
BPSE320373:1:Tno--0-
BPUM315750:0:Tyes---0
BSP107806:2:Tyes146-0-
BSP36773:2:Tyes--0-
BSP376:0:Tyes--0-
BSUB:0:Tyes133--0
BSUI204722:1:Tyes--0-
BSUI470137:1:Tno--0-
BTHA271848:1:Tno--0-
BTHE226186:0:Tyes0-1445-
BTHU281309:1:Tno---0
BTHU412694:1:Tno---0
BVIE269482:7:Tyes--0-
BWEI315730:4:Tyes0--2464
CABO218497:0:Tyes0---
CACE272562:1:Tyes--098
CAULO:0:Tyes--01045
CBEI290402:0:Tyes--11830
CBLO203907:0:Tyes0-481482
CBLO291272:0:Tno0-495496
CBOT36826:1:Tno--8610
CBOT441770:0:Tyes--8560
CBOT441771:0:Tno--8510
CBOT441772:1:Tno--8730
CBOT498213:1:Tno--8840
CBOT508765:1:Tyes--0461
CBOT515621:2:Tyes2753-9230
CBOT536232:0:Tno--9540
CBUR227377:1:Tyes--200
CBUR360115:1:Tno--019
CBUR434922:2:Tno--170
CCAV227941:1:Tyes0---
CCHL340177:0:Tyes0-9701133
CDES477974:0:Tyes0---
CDIP257309:0:Tyes--0-
CEFF196164:0:Fyes--0282
CFEL264202:1:Tyes0---
CGLU196627:0:Tyes--0282
CHUT269798:0:Tyes0-1339-
CHYD246194:0:Tyes0-71-
CJAP155077:0:Tyes--0-
CJEI306537:0:Tyes--7210
CJEJ192222:0:Tyes--0-
CJEJ195099:0:Tno--0-
CJEJ354242:2:Tyes--0-
CJEJ360109:0:Tyes--0-
CJEJ407148:0:Tno--0-
CKLU431943:1:Tyes---0
CMET456442:0:Tyes0--1931
CMIC31964:2:Tyes---0
CMIC443906:2:Tyes---0
CMUR243161:1:Tyes0---
CPER195102:1:Tyes---0
CPER195103:0:Tno---0
CPER289380:3:Tyes---0
CPHY357809:0:Tyes2349-18640
CPNE115711:1:Tyes0---
CPNE115713:0:Tno0---
CPNE138677:0:Tno0---
CPNE182082:0:Tno0---
CPRO264201:0:Fyes0---
CPSY167879:0:Tyes20-1
CRUT413404:0:Tyes--0-
CSAL290398:0:Tyes--0-
CSP501479:8:Fyes--0-
CSP78:2:Tyes--01509
CSUL444179:0:Tyes0---
CTEP194439:0:Tyes1311-6570
CTET212717:0:Tyes---0
CTRA471472:0:Tyes0---
CTRA471473:0:Tno0---
CVES412965:0:Tyes--0-
CVIO243365:0:Tyes--02496
DARO159087:0:Tyes--0-
DDES207559:0:Tyes--0-
DGEO319795:1:Tyes---0
DHAF138119:0:Tyes0--1492
DNOD246195:0:Tyes--0-
DOLE96561:0:Tyes--0-
DPSY177439:2:Tyes--0-
DRAD243230:3:Tyes0---
DRED349161:0:Tyes0-1032-
DSHI398580:5:Tyes--0-
DVUL882:1:Tyes--0-
ECAR218491:0:Tyes7908
ECOL199310:0:Tno2081
ECOL316407:0:Tno1302
ECOL331111:6:Tno2031
ECOL362663:0:Tno2081
ECOL364106:1:Tno2081
ECOL405955:2:Tyes2081
ECOL409438:6:Tyes2031
ECOL413997:0:Tno2031
ECOL439855:4:Tno2091
ECOL469008:0:Tno1302
ECOL481805:0:Tno1302
ECOL585034:0:Tno2031
ECOL585035:0:Tno2081
ECOL585055:0:Tno2031
ECOL585056:2:Tno2051
ECOL585057:0:Tno7908
ECOL585397:0:Tno2061
ECOL83334:0:Tno2031
ECOLI:0:Tno2031
ECOO157:0:Tno2031
EFAE226185:3:Tyes---0
EFER585054:1:Tyes81009
ELIT314225:0:Tyes--0-
ESP42895:1:Tyes1302
FALN326424:0:Tyes--13400
FJOH376686:0:Tyes790-8070
FNOD381764:0:Tyes--0-
FNUC190304:0:Tyes---0
FPHI484022:1:Tyes0---
FSP106370:0:Tyes--10240
FSP1855:0:Tyes--01296
FSUC59374:0:Tyes--0523
FTUL401614:0:Tyes0---
FTUL418136:0:Tno0---
FTUL458234:0:Tno0---
GBET391165:0:Tyes--0-
GFOR411154:0:Tyes1636-03109
GKAU235909:1:Tyes---0
GMET269799:1:Tyes---0
GOXY290633:5:Tyes--0-
GSUL243231:0:Tyes---0
GTHE420246:1:Tyes---0
GURA351605:0:Tyes---0
HACI382638:1:Tyes---0
HARS204773:0:Tyes--0-
HAUR316274:2:Tyes607--0
HCHE349521:0:Tyes--0-
HDUC233412:0:Tyes6090--
HHAL349124:0:Tyes--0-
HHEP235279:0:Tyes---0
HINF281310:0:Tyes6828114380
HINF374930:0:Tyes2060557209
HINF71421:0:Tno319713250
HMAR272569:8:Tyes---0
HMOD498761:0:Tyes879-0279
HNEP81032:0:Tyes--0-
HPY:0:Tno---0
HPYL357544:1:Tyes---0
HPYL85963:0:Tno---0
HSAL478009:4:Tyes---0
HSOM205914:1:Tyes7460662877
HSOM228400:0:Tno715007840
HSP64091:2:Tno---0
ILOI283942:0:Tyes23002299-0
JSP290400:1:Tyes--0-
JSP375286:0:Tyes--0-
KPNE272620:2:Tyes2061
KRAD266940:2:Fyes--078
LBIF355278:2:Tyes0-2938-
LBIF456481:2:Tno0-3046-
LBOR355276:0:Tyes--0-
LBOR355277:0:Tno--0-
LCAS321967:1:Tyes--0-
LCHO395495:0:Tyes--0-
LDEL321956:0:Tyes--04
LDEL390333:0:Tyes---0
LHEL405566:0:Tyes--100
LINN272626:1:Tno---0
LINT189518:0:Tyes--0-
LINT267671:0:Tno--0-
LLAC272622:5:Tyes--5050
LLAC272623:0:Tyes--4730
LMES203120:1:Tyes--4970
LMON169963:0:Tno---0
LMON265669:0:Tyes---0
LPLA220668:0:Tyes---0
LPNE272624:0:Tno919--0
LPNE297245:1:Fno840--0
LPNE297246:1:Fyes820--0
LPNE400673:0:Tno0--1127
LREU557436:0:Tyes---0
LSPH444177:1:Tyes---0
LWEL386043:0:Tyes0--507
LXYL281090:0:Tyes---0
MABS561007:1:Tyes--8030
MACE188937:0:Tyes0---
MAEO419665:0:Tyes0---
MAQU351348:2:Tyes--0-
MAVI243243:0:Tyes---0
MBAR269797:1:Tyes0---
MBOV233413:0:Tno---0
MBOV410289:0:Tno---0
MBUR259564:0:Tyes0---
MCAP243233:0:Tyes--0-
MEXT419610:0:Tyes--0-
MFLA265072:0:Tyes--0-
MGIL350054:3:Tyes---0
MHUN323259:0:Tyes0---
MJAN243232:2:Tyes0---
MKAN190192:0:Tyes0---
MLAB410358:0:Tyes0---
MLEP272631:0:Tyes---0
MLOT266835:2:Tyes--02240
MMAR267377:0:Tyes0---
MMAR368407:0:Tyes0---
MMAR394221:0:Tyes0-13391515
MMAR402880:1:Tyes0---
MMAR426368:0:Tyes0---
MMAR444158:0:Tyes0---
MMAZ192952:0:Tyes0---
MPET420662:1:Tyes--0-
MSED399549:0:Tyes0---
MSME246196:0:Tyes---0
MSP164756:1:Tno---0
MSP164757:0:Tno---0
MSP189918:2:Tyes---0
MSP266779:3:Tyes--0-
MSP409:2:Tyes--8840
MSUC221988:0:Tyes94412150865
MTBCDC:0:Tno---0
MTBRV:0:Tno---0
MTHE264732:0:Tyes---0
MTHE349307:0:Tyes0---
MTUB336982:0:Tno---0
MTUB419947:0:Tyes---0
MVAN350058:0:Tyes---0
MXAN246197:0:Tyes235-9730
NARO279238:0:Tyes--0-
NEUR228410:0:Tyes--0-
NEUT335283:2:Tyes--0-
NFAR247156:2:Tyes--03115
NGON242231:0:Tyes--4950
NHAM323097:2:Tyes--0319
NMEN122586:0:Tno--1360
NMEN122587:0:Tyes--1230
NMEN272831:0:Tno--1500
NMEN374833:0:Tno--1180
NMUL323848:3:Tyes--0-
NOCE323261:1:Tyes--0-
NPHA348780:2:Tyes---0
NSP35761:1:Tyes--21130
NWIN323098:0:Tyes--0316
OANT439375:5:Tyes--0-
OCAR504832:0:Tyes--0-
OIHE221109:0:Tyes---0
PAER178306:0:Tyes0---
PAER208963:0:Tyes--300
PAER208964:0:Tno--300
PARC259536:0:Tyes--0-
PARS340102:0:Tyes0---
PATL342610:0:Tyes0374373-
PCAR338963:0:Tyes0-738-
PCRY335284:1:Tyes--0-
PDIS435591:0:Tyes0-1504-
PENT384676:0:Tyes--9510
PFLU205922:0:Tyes--20670
PFLU216595:1:Tyes--22390
PFLU220664:0:Tyes--22330
PGIN242619:0:Tyes0---
PHAL326442:1:Tyes02-1
PING357804:0:Tyes11720--
PINT246198:1:Tyes0---
PISL384616:0:Tyes0---
PLUM243265:0:Fyes1302
PLUT319225:0:Tyes619-0199
PMAR167542:0:Tyes---0
PMAR74547:0:Tyes---0
PMEN399739:0:Tyes--0-
PMOB403833:0:Tyes906-0-
PMUL272843:1:Tyes01177122882
PNAP365044:8:Tyes--0-
PPRO298386:2:Tyes2031
PPUT160488:0:Tno--3820
PPUT351746:0:Tyes--35720
PPUT76869:0:Tno--9120
PRUM264731:0:Tyes0-673-
PSP117:0:Tyes--6160
PSP296591:2:Tyes--12840
PSP312153:0:Tyes--0-
PSP56811:2:Tyes--0-
PSTU379731:0:Tyes--0-
PSYR205918:0:Tyes--0-
PSYR223283:2:Tyes--0-
PTHE370438:0:Tyes284-0-
RALB246199:0:Tyes---0
RCAS383372:0:Tyes180-0463
RDEN375451:4:Tyes--0-
RETL347834:5:Tyes--0-
REUT264198:3:Tyes--0-
REUT381666:2:Tyes--0-
RFER338969:1:Tyes--0-
RLEG216596:6:Tyes--0-
RMET266264:2:Tyes--0-
RPAL258594:0:Tyes--13590
RPAL316055:0:Tyes--0-
RPAL316056:0:Tyes--0-
RPAL316057:0:Tyes--0-
RPAL316058:0:Tyes--13260
RPOM246200:1:Tyes--0-
RRUB269796:1:Tyes--7400
RSAL288705:0:Tyes--25560
RSOL267608:1:Tyes--0-
RSP101510:3:Fyes--04727
RSP357808:0:Tyes2001-9690
RSPH272943:4:Tyes--0-
RSPH349101:2:Tno--0-
RSPH349102:5:Tyes--0-
RXYL266117:0:Tyes257-0-
SACI330779:0:Tyes0---
SACI56780:0:Tyes0---
SALA317655:1:Tyes--0-
SARE391037:0:Tyes--25210
SAUR158879:1:Tno---0
SAUR196620:0:Tno---0
SAUR273036:0:Tno---0
SAUR282458:0:Tno---0
SAUR282459:0:Tno---0
SAUR359786:1:Tno---0
SAUR359787:1:Tno---0
SAUR367830:3:Tno---0
SAUR418127:0:Tyes---0
SAUR426430:0:Tno---0
SAUR93061:0:Fno---0
SAUR93062:1:Tno---0
SAVE227882:1:Fyes--28500
SBAL399599:3:Tyes2031
SBAL402882:1:Tno2031
SBOY300268:1:Tyes2031
SCO:2:Fyes--02895
SDEG203122:0:Tyes--0-
SDEN318161:0:Tyes20281
SDYS300267:1:Tyes2031
SENT209261:0:Tno6807
SENT220341:0:Tno6807
SENT295319:0:Tno2081
SENT321314:2:Tno2071
SENT454169:2:Tno2071
SEPI176279:1:Tyes---0
SEPI176280:0:Tno---0
SERY405948:0:Tyes--8170
SFLE198214:0:Tyes2031
SFLE373384:0:Tno2031
SFUM335543:0:Tyes---0
SGLO343509:3:Tyes0180218001801
SGOR29390:0:Tyes--01299
SHAE279808:0:Tyes---0
SHAL458817:0:Tyes2031
SHIGELLA:0:Tno1302
SLAC55218:1:Fyes--0-
SLOI323850:0:Tyes2031
SMED366394:3:Tyes--0-
SMEL266834:2:Tyes--21590
SMUT210007:0:Tyes---0
SONE211586:1:Tyes1302
SPEA398579:0:Tno2031
SPNE1313:0:Tyes--0846
SPNE170187:0:Tyes--0894
SPNE171101:0:Tno--0868
SPNE487213:0:Tno--0788
SPNE487214:0:Tno--0915
SPNE488221:0:Tno--0861
SPRO399741:1:Tyes1302
SPYO160490:0:Tno---0
SPYO186103:0:Tno---0
SPYO193567:0:Tno---0
SPYO198466:0:Tno---0
SPYO286636:0:Tno---0
SPYO293653:0:Tno---0
SPYO319701:0:Tyes---0
SPYO370551:0:Tno---0
SPYO370552:0:Tno---0
SPYO370554:0:Tyes---0
SRUB309807:1:Tyes0-1373459
SSAP342451:2:Tyes---0
SSED425104:0:Tyes1302
SSOL273057:0:Tyes0--1357
SSON300269:1:Tyes2031
SSP1131:0:Tyes0---
SSP292414:2:Tyes--01053
SSP644076:3:Fyes--0-
SSP644076:6:Fyes---0
SSP64471:0:Tyes---0
SSP94122:1:Tyes1302
SSUI391295:0:Tyes--2130
SSUI391296:0:Tyes--2140
STHE264199:0:Tyes--056
STHE292459:0:Tyes0-973828
STHE299768:0:Tno--058
STHE322159:2:Tyes--044
STOK273063:0:Tyes0---
STRO369723:0:Tyes--23070
STYP99287:1:Tyes2061
SWOL335541:0:Tyes376-0-
TCRU317025:0:Tyes--0-
TDEN292415:0:Tyes--0-
TFUS269800:0:Tyes--6170
TLET416591:0:Tyes3-0-
TMAR243274:0:Tyes0---
TPET390874:0:Tno0---
TPSE340099:0:Tyes--0-
TROS309801:0:Tyes0---
TSP1755:0:Tyes--0-
TSP28240:0:Tyes0---
TTEN273068:0:Tyes--0-
TTHE262724:1:Tyes0-1516-
TTHE300852:2:Tyes215-0-
TTUR377629:0:Tyes--0-
UMET351160:0:Tyes0---
VCHO:0:Tyes2031
VCHO345073:1:Tno2031
VEIS391735:1:Tyes--0-
VFIS312309:2:Tyes02431
VPAR223926:1:Tyes1302
VVUL196600:2:Tyes1302
VVUL216895:1:Tno2031
XAUT78245:1:Tyes--0-
XAXO190486:0:Tyes1029-02248
XCAM190485:0:Tyes1061-02117
XCAM314565:0:Tno1138-22610
XCAM316273:0:Tno1116-02278
XCAM487884:0:Tno803-23540
XFAS160492:2:Tno1366-2620
XFAS183190:1:Tyes842-01374
XFAS405440:0:Tno886-01400
XORY291331:0:Tno427-20230
XORY342109:0:Tyes393-19050
XORY360094:0:Tno2580-04071
YENT393305:1:Tyes2041
YPES187410:5:Tno102-
YPES214092:3:Tno102-
YPES349746:2:Tno1302
YPES360102:3:Tyes3041
YPES377628:2:Tno1403
YPES386656:2:Tno1302
YPSE273123:2:Tno2031
YPSE349747:2:Tno2031
ZMOB264203:0:Tyes--0-



Back to top