CANDIDATE ID: 970

CANDIDATE ID: 970

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9916033e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.2910000e-6

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG12096 (chpB) (b4225)
   Products of gene:
     - EG12096-MONOMER (ChpB toxin of the ChpB-ChpS toxin-antitoxin system)
       Reactions:
        EC# 3.1.27.-
     - CPLX0-7561 (ChpB-ChpS complex)

- EG11250 (chpS) (b4224)
   Products of gene:
     - EG11250-MONOMER (ChpS antitoxin of the ChpB-ChpS toxin-antitoxin system)
     - CPLX0-7561 (ChpB-ChpS complex)

- EG11249 (chpA) (b2782)
   Products of gene:
     - EG11249-MONOMER (MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity)
     - CPLX0-1241 (MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity)
     - CPLX0-1242 (MazE-MazF complex)
       Regulatees:

- EG10571 (chpR) (b2783)
   Products of gene:
     - EG10571-MONOMER (MazE antitoxin of the MazF-MazE toxin-antitoxin system)
     - CPLX0-841 (MazE antitoxin of the MazF-MazE toxin-antitoxin system)
     - CPLX0-1242 (MazE-MazF complex)
       Regulatees:



Back to top


ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 51
Effective number of orgs (counting one per cluster within 468 clusters): 35

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
TTUR377629 ncbi Teredinibacter turnerae T79014
SSON300269 ncbi Shigella sonnei Ss0464
SMUT210007 ncbi Streptococcus mutans UA1593
SDYS300267 ncbi Shigella dysenteriae Sd1974
SBOY300268 ncbi Shigella boydii Sb2274
RSP357808 ncbi Roseiflexus sp. RS-13
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a3
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PPUT160488 ncbi Pseudomonas putida KT24404
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
NSP103690 ncbi Nostoc sp. PCC 71204
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MAER449447 ncbi Microcystis aeruginosa NIES-8434
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566014
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
GURA351605 ncbi Geobacter uraniireducens Rf43
GOXY290633 ncbi Gluconobacter oxydans 621H3
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
ESP42895 Enterobacter sp.3
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5833
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10433
DRAD243230 ncbi Deinococcus radiodurans R14
CSP78 Caulobacter sp.4
CCHL340177 ncbi Chlorobium chlorochromatii CaD33
BVIE269482 ncbi Burkholderia vietnamiensis G44
BHAL272558 ncbi Bacillus halodurans C-1254
AVAR240292 ncbi Anabaena variabilis ATCC 294134
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232703
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453


Names of the homologs of the genes in the group in each of these orgs
  EG12096   EG11250   EG11249   EG10571   
TTUR377629 TERTU_1416TERTU_1415TERTU_1416TERTU_1415
SSON300269 SSO_2939SSO_2940SSO_2939SSO_2940
SMUT210007 SMU_173SMU_173SMU_172
SDYS300267 SDY_4461SDY_4460SDY_2999SDY_3000
SBOY300268 SBO_2663SBO_2664SBO_2663SBO_2664
RSP357808 ROSERS_3308ROSERS_3307ROSERS_3308
RPAL316056 RPC_3250RPC_3250RPC_3251
RPAL316055 RPE_2192RPE_2191RPE_2192RPE_2191
PSYR205918 PSYR_0890PSYR_0889PSYR_0890
PSP312153 PNUC_1107PNUC_1108PNUC_1107PNUC_1108
PPUT160488 PP_0771PP_0770PP_0771PP_0770
PLUM243265 PLU2365PLU2366PLU2365PLU2366
NSP103690 ALL3211ASL3212ALL3211ASL3212
NGON242231 NGO0516NGO0517NGO0516NGO0517
MTHE264732 MOTH_1021MOTH_1021MOTH_1020
MAER449447 MAE_62380MAE_02330MAE_62380MAE_02330
LINT189518 LA1781LA1780LA1781LA1780
KPNE272620 GKPORF_B1708GKPORF_B1709GKPORF_B1708GKPORF_B1709
GVIO251221 GLR0096GSR0095GLR0096GSR0095
GURA351605 GURA_3378GURA_1479GURA_1478
GOXY290633 GOX2564GOX2564GOX2565
GKAU235909 GK1648GK1647GK1648GK1647
ESP42895 ENT638_2067ENT638_2067ENT638_2066
EFER585054 EFER_0282EFER_0281EFER_0282EFER_0281
EFAE226185 EF_A0071EF_A0071EF_A0072
ECOO157 CHPBCHPSCHPACHPR
ECOL83334 ECS5203ECS5202ECS3642ECS3643
ECOL585397 ECED1_3235ECED1_3236ECED1_3235ECED1_3236
ECOL585057 ECIAI39_4695ECIAI39_4694ECIAI39_3201ECIAI39_3202
ECOL585056 P1ECUMN_0065P1ECUMN_0066P1ECUMN_0065P1ECUMN_0066
ECOL585055 EC55989_4783EC55989_4782EC55989_3057EC55989_3058
ECOL585035 ECS88_3050ECS88_3051ECS88_3050ECS88_3051
ECOL585034 ECIAI1_4457ECIAI1_4456ECIAI1_2890ECIAI1_2891
ECOL481805 ECOLC_0930ECOLC_0929ECOLC_0930ECOLC_0929
ECOL469008 ECBD_0947ECBD_0946ECBD_0947ECBD_0946
ECOL439855 ECSMS35_4703ECSMS35_4702ECSMS35_2920ECSMS35_2921
ECOL413997 ECB_02627ECB_02628ECB_02627ECB_02628
ECOL409438 ECSE_4530ECSE_4529ECSE_3040ECSE_3041
ECOL364106 UTI89_C3151UTI89_C3153UTI89_C3151UTI89_C3153
ECOL362663 ECP_2763ECP_2764ECP_2763ECP_2764
ECOL331111 ECE24377A_4794ECE24377A_4793ECE24377A_3086ECE24377A_3087
ECOL316407 ECK4221:JW4184:B4225ECK4220:JW5750:B4224ECK2776:JW2753:B2782ECK2777:JW2754:B2783
ECAR218491 ECA1676ECA1676ECA1677
DRAD243230 DR_0417DR_0416DR_0417DR_0416
CSP78 CAUL_3898CAUL_3899CAUL_3898CAUL_3899
CCHL340177 CAG_0429CAG_0429CAG_0428
BVIE269482 BCEP1808_7444BCEP1808_7445BCEP1808_7150BCEP1808_7445
BHAL272558 BH3721BH3720BH3721BH3720
AVAR240292 AVA_4869AVA_4870AVA_4869AVA_4870
AFER243159 AFE_1948AFE_1948AFE_1949
ABAC204669 ACID345_4624ACID345_4624ACID345_4623


Organism features enriched in list (features available for 48 out of the 51 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.002795717112
Disease:Dysentery 0.008259436
Disease:Urinary_tract_infection 0.000040844
GC_Content_Range4:0-40 4.857e-73213
GC_Content_Range4:40-60 1.248e-837224
GC_Content_Range7:30-40 0.00006903166
GC_Content_Range7:50-60 8.421e-1229107
Genome_Size_Range5:0-2 3.330e-61155
Genome_Size_Range5:2-4 0.00832199197
Genome_Size_Range5:4-6 2.896e-833184
Genome_Size_Range9:1-2 0.00005731128
Genome_Size_Range9:5-6 4.052e-72188
Gram_Stain:Gram_Neg 0.001495137333
Habitat:Multiple 0.003761223178
Motility:No 0.00396355151
Motility:Yes 0.000163034267
Oxygen_Req:Anaerobic 0.00389452102
Oxygen_Req:Facultative 6.566e-631201
Shape:Rod 0.003918037347



Back to top


ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 547
Effective number of orgs (counting one per cluster within 468 clusters): 416

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317581
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329530
YPES386656 ncbi Yersinia pestis Pestoides F0
YPES377628 ncbi Yersinia pestis Nepal5160
YPES360102 ncbi Yersinia pestis Antiqua0
YPES349746 ncbi Yersinia pestis Angola0
YPES214092 ncbi Yersinia pestis CO920
YPES187410 ncbi Yersinia pestis KIM 100
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80810
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c1
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP60
VVUL196600 ncbi Vibrio vulnificus YJ0160
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106330
VFIS312309 ncbi Vibrio fischeri ES1140
VCHO345073 ncbi Vibrio cholerae O3950
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169610
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT20
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148631
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-30
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPRO399741 ncbi Serratia proteamaculans 5680
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-11
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SLAC55218 Ruegeria lacuscaerulensis0
SHIGELLA ncbi Shigella flexneri 2a str. 2457T0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SFLE373384 ncbi Shigella flexneri 5 str. 84011
SFLE198214 ncbi Shigella flexneri 2a str. 3011
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4760
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B670
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91500
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT180
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty20
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)0
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP101510 ncbi Rhodococcus jostii RHA10
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H161
REUT264198 ncbi Ralstonia eutropha JMP1340
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30000
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP296591 ncbi Polaromonas sp. JS6660
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT76869 ncbi Pseudomonas putida GB-10
PPUT351746 ncbi Pseudomonas putida F10
PPRO298386 ncbi Photobacterium profundum SS91
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU220664 ncbi Pseudomonas fluorescens Pf-50
PFLU216595 ncbi Pseudomonas fluorescens SBW250
PFLU205922 ncbi Pseudomonas fluorescens Pf0-10
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER208964 ncbi Pseudomonas aeruginosa PAO10
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NHAM323097 ncbi Nitrobacter hamburgensis X140
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECOL199310 ncbi Escherichia coli CFT0730
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124720
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE450
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CAULO ncbi Caulobacter crescentus CB150
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BTHA271848 ncbi Burkholderia thailandensis E2640
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BSP376 Bradyrhizobium sp.0
BSP36773 Burkholderia sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPSE320373 ncbi Burkholderia pseudomallei 6680
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BPSE272560 ncbi Burkholderia pseudomallei K962430
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BMAL320389 ncbi Burkholderia mallei NCTC 102470
BMAL320388 ncbi Burkholderia mallei SAVP10
BMAL243160 ncbi Burkholderia mallei ATCC 233440
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BCEN331272 ncbi Burkholderia cenocepacia HI24240
BCEN331271 ncbi Burkholderia cenocepacia AU 10540
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAMB339670 ncbi Burkholderia ambifaria AMMD0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
ASP1667 Arthrobacter sp.0
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4490
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AHYD196024 Aeromonas hydrophila dhakensis0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40181
ABAU360910 ncbi Bordetella avium 197N0
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG12096   EG11250   EG11249   EG10571   
ZMOB264203
YPSE349747 YPSIP31758_B0073
YPSE273123
YPES386656
YPES377628
YPES360102
YPES349746
YPES214092
YPES187410
YENT393305
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492 XFA0027
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
XAUT78245
WSUC273121
WPIP955
WPIP80849
VVUL216895
VVUL196600
VPAR223926
VFIS312309
VCHO345073
VCHO
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TTEN273068 TTE2166
TSP28240
TSP1755 TETH514_0966
TROS309801
TPSE340099 TETH39_0489
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124 TERY_1071
TELO197221
TDEN326298
TDEN292415
TCRU317025
TACI273075
SWOL335541 SWOL_1876
STYP99287
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459 STH2934
STHE264199
SSUI391296
SSUI391295
SSP94122
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SSED425104
SSAP342451
SRUB309807
SPYO370554
SPYO370553 MGAS2096_SPY1104
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPRO399741
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579
SONE211586 SO_A0041
SMEL266834
SMED366394
SMAR399550
SLOI323850
SLAC55218
SHIGELLA
SHAL458817
SHAE279808
SGOR29390
SGLO343509
SFUM335543
SFLE373384 SFV_3419
SFLE198214 AAN44895.1
SERY405948 SACE_1313
SEPI176280
SEPI176279
SENT454169
SENT321314
SENT295319
SENT220341
SENT209261
SELO269084
SDEN318161
SDEG203122
SCO
SBAL402882
SBAL399599
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP101510
RSOL267608
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL258594
RMET266264
RMAS416276
RLEG216596
RFER338969
RFEL315456
REUT381666 PHG381
REUT264198
RETL347834
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896 A1I_07630
RBEL336407 RBE_1374
RALB246199
RAKA293614 A1C_05785
PTOR263820
PSYR223283
PSTU379731
PSP56811
PSP296591
PSP117
PRUM264731
PPUT76869
PPUT351746
PPRO298386 PBPRA2672
PPEN278197
PNAP365044
PMUL272843
PMOB403833
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PING357804
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PFLU220664
PFLU216595
PFLU205922
PENT384676
PDIS435591
PCRY335284
PCAR338963 PCAR_0962
PATL342610
PAST100379
PARS340102
PARC259536
PAER208964
PAER208963
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109
OCAR504832
OANT439375
NWIN323098
NSP387092 NIS_0353
NSP35761
NSEN222891
NPHA348780
NMUL323848
NHAM323097
NFAR247156
NEUT335283
NARO279238
MXAN246197
MVAN350058 MVAN_1144
MTUB419947 MRA_2825
MTUB336982 TBFG_12814
MTHE349307
MTHE187420
MTBRV RV2801C
MTBCDC MT2869
MSYN262723
MSUC221988
MSTA339860
MSP409
MSP400668
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368 MMARC7_1191
MMAR402880 MMARC5_1483
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLOT266835
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289 BCG_2819C
MBOV233413 MB2824C
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436 LREU_0256
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668 LP_2882
LMON265669
LMON169963
LMES203120 LEUM_1811
LLAC272623
LLAC272622
LINT363253
LINT267671
LINN272626
LHEL405566
LGAS324831 LGAS_1707
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277 LBJ_0402
LBOR355276 LBL_2675
LBIF456481 LEPBI_I0741
LBIF355278 LBF_0718
KRAD266940
JSP375286
JSP290400
ILOI283942
IHOS453591
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMOD498761 HM1_1709
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HCHE349521
HBUT415426
HAUR316274
HARS204773
HACI382638
GTHE420246
GSUL243231
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413 FMG_1574
FJOH376686
FALN326424 FRAAL5929
ERUM302409
ERUM254945
ELIT314225
ECOL199310
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRED349161
DPSY177439
DNOD246195
DHAF138119
DETH243164
DDES207559
DARO159087
CVIO243365
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP501479
CSAL290398
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380 CPR_0286
CPER195103
CPER195102
CPEL335992
CNOV386415 NT01CX_1266
CMUR243161
CMIC443906 CMM_0814
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_3579
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHYD246194
CHUT269798 CHU_0745
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CCUR360105
CCON360104
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232 CLM_3858
CBOT515621 CLJ_B3699
CBOT508765
CBOT498213 CLD_1112
CBOT441772 CLI_3580
CBOT441771 CLC_3339
CBOT441770 CLB_3452
CBOT36826 CBO3395A
CBLO291272
CBLO203907
CBEI290402
CAULO
CACE272562 CAC0494
CABO218497
BXEN266265
BWEI315730
BTUR314724
BTHU412694
BTHU281309
BTHE226186
BTHA271848
BSUI470137
BSUI204722
BSUB
BSP376
BSP36773
BSP107806
BQUI283165
BPUM315750
BPSE320373
BPSE320372
BPSE272560
BPET94624
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BMAL320389
BMAL320388
BMAL243160
BLON206672
BLIC279010
BJAP224911
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264
BCER405917
BCER315749
BCER288681
BCER226900
BCEN331272
BCEN331271
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAMB339670
BAFZ390236
BABO262698
AYEL322098
AURANTIMONAS
ASP76114
ASP62977
ASP62928
ASP232721
ASP1667
ASAL382245
APLE434271
APLE416269
APHA212042
APER272557
AORE350688 CLOS_2273
ANAE240017
AMET293826
AMAR329726 AM1_2600
AMAR234826
ALAI441768
AHYD196024
AFUL224325
AEHR187272
ADEH290397
ACEL351607
ACAU438753
ABUT367737 ABU_1572
ABAU360910
AAVE397945
AAUR290340
AAEO224324


Organism features enriched in list (features available for 510 out of the 547 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00330718892
Arrangment:Pairs 0.000519987112
GC_Content_Range4:0-40 1.528e-7205213
GC_Content_Range4:40-60 4.644e-9173224
GC_Content_Range7:0-30 0.00140314747
GC_Content_Range7:30-40 0.0000970158166
GC_Content_Range7:50-60 3.038e-1665107
Genome_Size_Range5:0-2 9.606e-7151155
Genome_Size_Range5:4-6 0.0000516146184
Genome_Size_Range9:1-2 0.0000434124128
Genome_Size_Range9:5-6 0.00007506588
Gram_Stain:Gram_Neg 0.0015604280333
Gram_Stain:Gram_Pos 0.0040717140150
Motility:No 0.0000439145151
Motility:Yes 0.0030316223267
Oxygen_Req:Anaerobic 0.009474296102
Oxygen_Req:Facultative 0.0009762164201



Back to top


ORGANISMS ENRICHED FOR GROUP:




Back to top


ORGANISMS DEPLETED FOR GROUP:




Back to top


PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1182 (trehalose degradation II (trehalase))70290.4314
PWY0-1277 (3-phenylpropionate and 3-(3-hydroxyphenyl)propionate degradation)19140.4237
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45220.4143



Back to top


PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11250   EG11249   EG10571   
EG120960.999070.9994820.999172
EG112500.9989290.999002
EG112490.999307
EG10571



Back to top


PAIRWISE BLAST SCORES:

  EG12096   EG11250   EG11249   EG10571   
EG120960.0f0-8.2e-8-
EG11250-0.0f0-2.5e-6
EG112498.2e-8-0.0f0-
EG10571-2.5e-6-0.0f0



Back to top


PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-1242 (MazE-MazF complex) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9994 0.9990 EG10571 (chpR) EG10571-MONOMER (MazE antitoxin of the MazF-MazE toxin-antitoxin system)
   *in cand* 0.9994 0.9989 EG11249 (chpA) EG11249-MONOMER (MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9989 EG11250 (chpS) EG11250-MONOMER (ChpS antitoxin of the ChpB-ChpS toxin-antitoxin system)
   *in cand* 0.9994 0.9991 EG12096 (chpB) EG12096-MONOMER (ChpB toxin of the ChpB-ChpS toxin-antitoxin system)

- CPLX0-7561 (ChpB-ChpS complex) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9989 EG11250 (chpS) EG11250-MONOMER (ChpS antitoxin of the ChpB-ChpS toxin-antitoxin system)
   *in cand* 0.9994 0.9991 EG12096 (chpB) EG12096-MONOMER (ChpB toxin of the ChpB-ChpS toxin-antitoxin system)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9990 EG10571 (chpR) EG10571-MONOMER (MazE antitoxin of the MazF-MazE toxin-antitoxin system)
   *in cand* 0.9994 0.9989 EG11249 (chpA) EG11249-MONOMER (MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity)



Back to top


GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10571 EG11249 (centered at EG10571)
EG11250 EG12096 (centered at EG12096)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12096   EG11250   EG11249   EG10571   
86/62343/623115/62355/623
ABAC204669:0:Tyes1-10
ABOR393595:0:Tyes-0-0
ABUT367737:0:Tyes0---
ACRY349163:3:Tyes0-0-
AFER243159:0:Tyes0-01
AMAR329726:9:Tyes0---
AORE350688:0:Tyes0---
AVAR240292:3:Tyes0101
BAMB398577:0:Tno0-0-
BHAL272558:0:Tyes1010
BHEN283166:0:Tyes0-0-
BTRI382640:1:Tyes0-0-
BVIE269482:2:Tyes01-1
BVIE269482:3:Tyes--0-
CACE272562:1:Tyes--0-
CBOT36826:1:Tno--0-
CBOT441770:0:Tyes--0-
CBOT441771:0:Tno--0-
CBOT441772:1:Tno--0-
CBOT498213:1:Tno--0-
CBOT515621:2:Tyes--0-
CBOT536232:0:Tno--0-
CCHL340177:0:Tyes2-20
CDES477974:0:Tyes0-0-
CHUT269798:0:Tyes--0-
CKLU431943:1:Tyes0---
CMIC443906:2:Tyes--0-
CNOV386415:0:Tyes0---
CPER289380:3:Tyes--0-
CSP78:2:Tyes0101
DGEO319795:1:Tyes0-0-
DOLE96561:0:Tyes0-0-
DRAD243230:3:Tyes1010
ECAR218491:0:Tyes0-01
ECOL316407:0:Tno1433143201
ECOL331111:6:Tno1642164101
ECOL362663:0:Tno0101
ECOL364106:1:Tno0202
ECOL405955:2:Tyes0-0-
ECOL409438:6:Tyes1537153601
ECOL413997:0:Tno0101
ECOL439855:4:Tno1705170401
ECOL469008:0:Tno1010
ECOL481805:0:Tno1010
ECOL585034:0:Tno1523152201
ECOL585035:0:Tno0101
ECOL585055:0:Tno1683168201
ECOL585056:1:Tno0101
ECOL585057:0:Tno1488148701
ECOL585397:0:Tno0101
ECOL83334:0:Tno1614161301
ECOLI:0:Tno1466146501
ECOO157:0:Tno1579157801
EFAE226185:2:Tyes0-01
EFER585054:1:Tyes1010
ESP42895:1:Tyes1-10
FALN326424:0:Tyes--0-
FMAG334413:1:Tyes---0
GKAU235909:1:Tyes1010
GMET269799:1:Tyes0-0-
GOXY290633:4:Tyes0-01
GURA351605:0:Tyes1885-10
GVIO251221:0:Tyes1010
HMOD498761:0:Tyes0---
HMUK485914:1:Tyes0-0-
HWAL362976:1:Tyes0-0-
KPNE272620:2:Tyes0101
LACI272621:0:Tyes0-0-
LBIF355278:2:Tyes--0-
LBIF456481:2:Tno--0-
LBOR355276:1:Tyes--0-
LBOR355277:1:Tno--0-
LGAS324831:0:Tyes--0-
LINT189518:1:Tyes1010
LJOH257314:0:Tyes0-0-
LMES203120:1:Tyes--0-
LPLA220668:0:Tyes--0-
LREU557436:0:Tyes--0-
MAER449447:0:Tyes6053060530
MAQU351348:1:Tyes--01
MBOV233413:0:Tno--0-
MBOV410289:0:Tno--0-
MMAR402880:1:Tyes--0-
MMAR426368:0:Tyes--0-
MTBCDC:0:Tno--0-
MTBRV:0:Tno--0-
MTHE264732:0:Tyes1-10
MTUB336982:0:Tno--0-
MTUB419947:0:Tyes--0-
MVAN350058:0:Tyes--0-
NEUR228410:0:Tyes0-613-
NGON242231:0:Tyes0101
NMEN122586:0:Tno0-0-
NMEN122587:0:Tyes0-0-
NMEN272831:0:Tno0-0-
NMEN374833:0:Tno0-0-
NOCE323261:1:Tyes0-0-
NSP103690:6:Tyes0101
NSP387092:0:Tyes--0-
PCAR338963:0:Tyes--0-
PLUM243265:0:Fyes0101
PPRO298386:2:Tyes--0-
PPUT160488:0:Tno1010
PSP312153:0:Tyes0101
PSYR205918:0:Tyes101-
PTHE370438:0:Tyes0-0-
RAKA293614:0:Fyes--0-
RBEL336407:0:Tyes--0-
RBEL391896:0:Fno--0-
REUT381666:0:Tyes--0-
RPAL316055:0:Tyes1010
RPAL316056:0:Tyes0-01
RSP357808:0:Tyes-101
SBOY300268:1:Tyes0101
SDYS300267:1:Tyes1348134701
SERY405948:0:Tyes--0-
SFLE198214:0:Tyes0---
SFLE373384:0:Tno0---
SMUT210007:0:Tyes1-10
SONE211586:0:Tyes--0-
SPYO370553:0:Tno0---
SSON300269:1:Tyes0101
STHE292459:0:Tyes0---
SWOL335541:0:Tyes--0-
TDEN243275:0:Tyes0-0-
TERY203124:0:Tyes0---
TPSE340099:0:Tyes0---
TSP1755:0:Tyes0---
TTEN273068:0:Tyes--0-
TTUR377629:0:Tyes1010
VEIS391735:1:Tyes10--
XFAS160492:1:Tno--0-
YPSE349747:1:Tno---0



Back to top