Org ID | Org Name | # genes in group found in org |
YPSE349747 ncbi | Yersinia pseudotuberculosis IP 31758 | 4 |
YPSE273123 ncbi | Yersinia pseudotuberculosis IP 32953 | 4 |
YENT393305 ncbi | Yersinia enterocolitica enterocolitica 8081 | 4 |
VVUL216895 ncbi | Vibrio vulnificus CMCP6 | 4 |
VVUL196600 ncbi | Vibrio vulnificus YJ016 | 4 |
VPAR223926 ncbi | Vibrio parahaemolyticus RIMD 2210633 | 4 |
VFIS312309 ncbi | Vibrio fischeri ES114 | 4 |
VCHO345073 ncbi | Vibrio cholerae O395 | 4 |
VCHO ncbi | Vibrio cholerae O1 biovar El Tor str. N16961 | 4 |
TTEN273068 ncbi | Thermoanaerobacter tengcongensis MB4 | 3 |
TSP28240 | Thermotoga sp. | 3 |
TSP1755 | Thermoanaerobacter sp. | 4 |
TPSE340099 ncbi | Thermoanaerobacter pseudethanolicus ATCC 33223 | 4 |
TPET390874 ncbi | Thermotoga petrophila RKU-1 | 3 |
TMAR243274 ncbi | Thermotoga maritima MSB8 | 3 |
TLET416591 ncbi | Thermotoga lettingae TMO | 3 |
STYP99287 ncbi | Salmonella enterica enterica serovar Typhimurium str. LT2 | 4 |
STHE322159 ncbi | Streptococcus thermophilus LMD-9 | 4 |
STHE299768 ncbi | Streptococcus thermophilus CNRZ1066 | 4 |
STHE292459 ncbi | Symbiobacterium thermophilum IAM 14863 | 4 |
STHE264199 ncbi | Streptococcus thermophilus LMG 18311 | 4 |
SSUI391295 ncbi | Streptococcus suis 05ZYH33 | 3 |
SSP94122 ncbi | Shewanella sp. ANA-3 | 4 |
SSP644076 | Silicibacter sp. TrichCH4B | 3 |
SSP292414 ncbi | Ruegeria sp. TM1040 | 3 |
SSON300269 ncbi | Shigella sonnei Ss046 | 4 |
SSED425104 ncbi | Shewanella sediminis HAW-EB3 | 4 |
SSAP342451 ncbi | Staphylococcus saprophyticus saprophyticus ATCC 15305 | 4 |
SPYO370554 ncbi | Streptococcus pyogenes MGAS10750 | 4 |
SPYO370553 ncbi | Streptococcus pyogenes MGAS2096 | 3 |
SPYO370552 ncbi | Streptococcus pyogenes MGAS10270 | 4 |
SPYO370551 ncbi | Streptococcus pyogenes MGAS9429 | 4 |
SPYO319701 ncbi | Streptococcus pyogenes MGAS6180 | 4 |
SPYO293653 ncbi | Streptococcus pyogenes MGAS5005 | 4 |
SPYO286636 ncbi | Streptococcus pyogenes MGAS10394 | 4 |
SPYO198466 ncbi | Streptococcus pyogenes MGAS315 | 4 |
SPYO193567 ncbi | Streptococcus pyogenes SSI-1 | 4 |
SPYO186103 ncbi | Streptococcus pyogenes MGAS8232 | 4 |
SPYO160490 ncbi | Streptococcus pyogenes M1 GAS | 4 |
SPRO399741 ncbi | Serratia proteamaculans 568 | 4 |
SPNE488221 ncbi | Streptococcus pneumoniae 70585 | 3 |
SPNE487214 ncbi | Streptococcus pneumoniae Hungary19A-6 | 3 |
SPNE487213 ncbi | Streptococcus pneumoniae Taiwan19F-14 | 3 |
SPNE171101 ncbi | Streptococcus pneumoniae R6 | 3 |
SPNE170187 ncbi | Streptococcus pneumoniae G54 | 3 |
SPNE1313 | Streptococcus pneumoniae | 3 |
SPEA398579 ncbi | Shewanella pealeana ATCC 700345 | 4 |
SONE211586 ncbi | Shewanella oneidensis MR-1 | 4 |
SMUT210007 ncbi | Streptococcus mutans UA159 | 4 |
SLOI323850 ncbi | Shewanella loihica PV-4 | 4 |
SLAC55218 | Ruegeria lacuscaerulensis | 3 |
SHIGELLA ncbi | Shigella flexneri 2a str. 2457T | 4 |
SHAL458817 ncbi | Shewanella halifaxensis HAW-EB4 | 4 |
SHAE279808 ncbi | Staphylococcus haemolyticus JCSC1435 | 4 |
SGOR29390 | Streptococcus gordonii Challis | 4 |
SFLE373384 ncbi | Shigella flexneri 5 str. 8401 | 4 |
SFLE198214 ncbi | Shigella flexneri 2a str. 301 | 4 |
SERY405948 ncbi | Saccharopolyspora erythraea NRRL 2338 | 3 |
SEPI176280 ncbi | Staphylococcus epidermidis ATCC 12228 | 4 |
SEPI176279 ncbi | Staphylococcus epidermidis RP62A | 4 |
SENT454169 ncbi | Salmonella enterica enterica serovar Heidelberg str. SL476 | 4 |
SENT321314 ncbi | Salmonella enterica enterica serovar Choleraesuis str. SC-B67 | 4 |
SENT295319 ncbi | Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 | 4 |
SENT220341 ncbi | Salmonella enterica enterica serovar Typhi str. CT18 | 4 |
SENT209261 ncbi | Salmonella enterica enterica serovar Typhi str. Ty2 | 4 |
SDYS300267 ncbi | Shigella dysenteriae Sd197 | 4 |
SDEN318161 ncbi | Shewanella denitrificans OS217 | 4 |
SBOY300268 ncbi | Shigella boydii Sb227 | 4 |
SBAL402882 ncbi | Shewanella baltica OS185 | 4 |
SBAL399599 ncbi | Shewanella baltica OS195 | 4 |
SAUR93062 ncbi | Staphylococcus aureus aureus COL | 4 |
SAUR93061 ncbi | Staphylococcus aureus aureus NCTC 8325 | 4 |
SAUR426430 ncbi | Staphylococcus aureus aureus Newman | 4 |
SAUR418127 ncbi | Staphylococcus aureus aureus Mu3 | 4 |
SAUR367830 | Staphylococcus aureus aureus USA300 | 4 |
SAUR359787 ncbi | Staphylococcus aureus aureus JH1 | 4 |
SAUR359786 ncbi | Staphylococcus aureus aureus JH9 | 4 |
SAUR282459 ncbi | Staphylococcus aureus aureus MSSA476 | 4 |
SAUR282458 ncbi | Staphylococcus aureus aureus MRSA252 | 4 |
SAUR273036 ncbi | Staphylococcus aureus RF122 | 4 |
SAUR196620 ncbi | Staphylococcus aureus aureus MW2 | 4 |
SAUR158879 ncbi | Staphylococcus aureus aureus N315 | 4 |
SAUR158878 ncbi | Staphylococcus aureus aureus Mu50 | 4 |
SAGA211110 ncbi | Streptococcus agalactiae NEM316 | 4 |
SAGA208435 ncbi | Streptococcus agalactiae 2603V/R | 4 |
SAGA205921 ncbi | Streptococcus agalactiae A909 | 4 |
RXYL266117 ncbi | Rubrobacter xylanophilus DSM 9941 | 4 |
RMET266264 ncbi | Ralstonia metallidurans CH34 | 4 |
RFER338969 ncbi | Rhodoferax ferrireducens T118 | 4 |
REUT381666 ncbi | Ralstonia eutropha H16 | 4 |
REUT264198 ncbi | Ralstonia eutropha JMP134 | 4 |
PSYR223283 ncbi | Pseudomonas syringae pv. tomato str. DC3000 | 4 |
PSYR205918 ncbi | Pseudomonas syringae pv. syringae B728a | 4 |
PSTU379731 ncbi | Pseudomonas stutzeri A1501 | 4 |
PSP56811 | Psychrobacter sp. | 4 |
PSP296591 ncbi | Polaromonas sp. JS666 | 4 |
PRUM264731 ncbi | Prevotella ruminicola 23 | 3 |
PPUT76869 ncbi | Pseudomonas putida GB-1 | 4 |
PPUT351746 ncbi | Pseudomonas putida F1 | 4 |
PPUT160488 ncbi | Pseudomonas putida KT2440 | 4 |
PPRO298386 ncbi | Photobacterium profundum SS9 | 4 |
PPEN278197 ncbi | Pediococcus pentosaceus ATCC 25745 | 3 |
PNAP365044 ncbi | Polaromonas naphthalenivorans CJ2 | 4 |
PMUL272843 ncbi | Pasteurella multocida multocida Pm70 | 4 |
PMEN399739 ncbi | Pseudomonas mendocina ymp | 4 |
PINT246198 | Prevotella intermedia 17 | 3 |
PING357804 ncbi | Psychromonas ingrahamii 37 | 4 |
PHAL326442 ncbi | Pseudoalteromonas haloplanktis TAC125 | 4 |
PGIN242619 ncbi | Porphyromonas gingivalis W83 | 3 |
PFLU220664 ncbi | Pseudomonas fluorescens Pf-5 | 4 |
PFLU216595 ncbi | Pseudomonas fluorescens SBW25 | 4 |
PFLU205922 ncbi | Pseudomonas fluorescens Pf0-1 | 4 |
PENT384676 ncbi | Pseudomonas entomophila L48 | 4 |
PCRY335284 ncbi | Psychrobacter cryohalolentis K5 | 4 |
PARC259536 ncbi | Psychrobacter arcticus 273-4 | 4 |
PAER208964 ncbi | Pseudomonas aeruginosa PAO1 | 4 |
PAER208963 ncbi | Pseudomonas aeruginosa UCBPP-PA14 | 4 |
OIHE221109 ncbi | Oceanobacillus iheyensis HTE831 | 4 |
OANT439375 ncbi | Ochrobactrum anthropi ATCC 49188 | 3 |
NMEN374833 ncbi | Neisseria meningitidis 053442 | 4 |
NMEN272831 ncbi | Neisseria meningitidis FAM18 | 4 |
NMEN122587 ncbi | Neisseria meningitidis Z2491 | 4 |
NMEN122586 ncbi | Neisseria meningitidis MC58 | 4 |
NGON242231 ncbi | Neisseria gonorrhoeae FA 1090 | 4 |
MSUC221988 ncbi | Mannheimia succiniciproducens MBEL55E | 4 |
MSP409 | Methylobacterium sp. | 3 |
MSP400668 ncbi | Marinomonas sp. MWYL1 | 4 |
MAQU351348 ncbi | Marinobacter aquaeolei VT8 | 4 |
LWEL386043 ncbi | Listeria welshimeri serovar 6b str. SLCC5334 | 4 |
LSPH444177 ncbi | Lysinibacillus sphaericus C3-41 | 3 |
LSAK314315 ncbi | Lactobacillus sakei sakei 23K | 4 |
LREU557436 ncbi | Lactobacillus reuteri DSM 20016 | 3 |
LPLA220668 ncbi | Lactobacillus plantarum WCFS1 | 3 |
LMON265669 ncbi | Listeria monocytogenes 4b F2365 | 4 |
LMON169963 ncbi | Listeria monocytogenes EGD-e | 4 |
LMES203120 ncbi | Leuconostoc mesenteroides mesenteroides ATCC 8293 | 3 |
LLAC272623 ncbi | Lactococcus lactis lactis Il1403 | 4 |
LLAC272622 ncbi | Lactococcus lactis cremoris SK11 | 4 |
LJOH257314 ncbi | Lactobacillus johnsonii NCC 533 | 3 |
LINN272626 ncbi | Listeria innocua Clip11262 | 4 |
LHEL405566 ncbi | Lactobacillus helveticus DPC 4571 | 4 |
LGAS324831 ncbi | Lactobacillus gasseri ATCC 33323 | 4 |
LDEL390333 ncbi | Lactobacillus delbrueckii bulgaricus ATCC 11842 | 4 |
LDEL321956 ncbi | Lactobacillus delbrueckii bulgaricus ATCC BAA-365 | 4 |
LCAS321967 ncbi | Lactobacillus casei ATCC 334 | 4 |
LBRE387344 ncbi | Lactobacillus brevis ATCC 367 | 4 |
LACI272621 ncbi | Lactobacillus acidophilus NCFM | 4 |
KPNE272620 ncbi | Klebsiella pneumoniae pneumoniae MGH 78578 | 4 |
JSP375286 ncbi | Janthinobacterium sp. Marseille | 4 |
HSOM228400 ncbi | Haemophilus somnus 2336 | 4 |
HSOM205914 ncbi | Haemophilus somnus 129PT | 4 |
HMOD498761 ncbi | Heliobacterium modesticaldum Ice1 | 4 |
HINF71421 ncbi | Haemophilus influenzae Rd KW20 | 4 |
HINF374930 ncbi | Haemophilus influenzae PittEE | 3 |
HINF281310 ncbi | Haemophilus influenzae 86-028NP | 4 |
HDUC233412 ncbi | Haemophilus ducreyi 35000HP | 4 |
HCHE349521 ncbi | Hahella chejuensis KCTC 2396 | 4 |
GTHE420246 ncbi | Geobacillus thermodenitrificans NG80-2 | 4 |
GSUL243231 ncbi | Geobacter sulfurreducens PCA | 4 |
GKAU235909 ncbi | Geobacillus kaustophilus HTA426 | 4 |
FNUC190304 ncbi | Fusobacterium nucleatum nucleatum ATCC 25586 | 3 |
FNOD381764 ncbi | Fervidobacterium nodosum Rt17-B1 | 3 |
FMAG334413 ncbi | Finegoldia magna ATCC 29328 | 3 |
ESP42895 | Enterobacter sp. | 4 |
EFER585054 ncbi | Escherichia fergusonii ATCC 35469 | 4 |
EFAE226185 ncbi | Enterococcus faecalis V583 | 4 |
ECOO157 ncbi | Escherichia coli O157:H7 EDL933 | 4 |
ECOL83334 | Escherichia coli O157:H7 | 4 |
ECOL585397 ncbi | Escherichia coli ED1a | 4 |
ECOL585057 ncbi | Escherichia coli IAI39 | 4 |
ECOL585056 ncbi | Escherichia coli UMN026 | 4 |
ECOL585055 ncbi | Escherichia coli 55989 | 4 |
ECOL585035 ncbi | Escherichia coli S88 | 4 |
ECOL585034 ncbi | Escherichia coli IAI1 | 4 |
ECOL481805 ncbi | Escherichia coli ATCC 8739 | 4 |
ECOL469008 ncbi | Escherichia coli BL21(DE3) | 4 |
ECOL439855 ncbi | Escherichia coli SMS-3-5 | 4 |
ECOL413997 ncbi | Escherichia coli B str. REL606 | 4 |
ECOL409438 ncbi | Escherichia coli SE11 | 4 |
ECOL405955 ncbi | Escherichia coli APEC O1 | 4 |
ECOL364106 ncbi | Escherichia coli UTI89 | 4 |
ECOL362663 ncbi | Escherichia coli 536 | 4 |
ECOL331111 ncbi | Escherichia coli E24377A | 4 |
ECOL316407 ncbi | Escherichia coli K-12 substr. W3110 | 4 |
ECOL199310 ncbi | Escherichia coli CFT073 | 4 |
ECAR218491 ncbi | Pectobacterium atrosepticum SCRI1043 | 4 |
DVUL882 ncbi | Desulfovibrio vulgaris Hildenborough | 3 |
DSHI398580 ncbi | Dinoroseobacter shibae DFL 12 | 3 |
DRED349161 ncbi | Desulfotomaculum reducens MI-1 | 4 |
DPSY177439 ncbi | Desulfotalea psychrophila LSv54 | 3 |
DNOD246195 ncbi | Dichelobacter nodosus VCS1703A | 4 |
DHAF138119 ncbi | Desulfitobacterium hafniense Y51 | 4 |
DGEO319795 ncbi | Deinococcus geothermalis DSM 11300 | 3 |
DDES207559 ncbi | Desulfovibrio desulfuricans desulfuricans G20 | 4 |
CVIO243365 ncbi | Chromobacterium violaceum ATCC 12472 | 4 |
CTET212717 ncbi | Clostridium tetani E88 | 4 |
CSAL290398 ncbi | Chromohalobacter salexigens DSM 3043 | 4 |
CPSY167879 ncbi | Colwellia psychrerythraea 34H | 4 |
CPHY357809 ncbi | Clostridium phytofermentans ISDg | 3 |
CPER289380 ncbi | Clostridium perfringens SM101 | 3 |
CPER195103 ncbi | Clostridium perfringens ATCC 13124 | 3 |
CPER195102 ncbi | Clostridium perfringens 13 | 3 |
CNOV386415 ncbi | Clostridium novyi NT | 3 |
CKLU431943 ncbi | Clostridium kluyveri DSM 555 | 4 |
CHYD246194 ncbi | Carboxydothermus hydrogenoformans Z-2901 | 4 |
CDIF272563 ncbi | Clostridium difficile 630 | 4 |
CBOT536232 ncbi | Clostridium botulinum A2 str. Kyoto | 4 |
CBOT515621 ncbi | Clostridium botulinum Ba4 str. 657 | 4 |
CBOT508765 ncbi | Clostridium botulinum B str. Eklund 17B | 3 |
CBOT498213 ncbi | Clostridium botulinum B1 str. Okra | 4 |
CBOT441772 ncbi | Clostridium botulinum F str. Langeland | 4 |
CBOT441771 ncbi | Clostridium botulinum A str. Hall | 4 |
CBOT441770 ncbi | Clostridium botulinum A str. ATCC 19397 | 4 |
CBOT36826 | Clostridium botulinum A | 4 |
CBEI290402 ncbi | Clostridium beijerinckii NCIMB 8052 | 3 |
CACE272562 ncbi | Clostridium acetobutylicum ATCC 824 | 3 |
BWEI315730 ncbi | Bacillus weihenstephanensis KBAB4 | 4 |
BVIE269482 ncbi | Burkholderia vietnamiensis G4 | 4 |
BTHU412694 ncbi | Bacillus thuringiensis Al Hakam | 4 |
BTHU281309 ncbi | Bacillus thuringiensis serovar konkukian str. 97-27 | 4 |
BTHE226186 ncbi | Bacteroides thetaiotaomicron VPI-5482 | 3 |
BTHA271848 ncbi | Burkholderia thailandensis E264 | 4 |
BSUI470137 ncbi | Brucella suis ATCC 23445 | 3 |
BSUI204722 ncbi | Brucella suis 1330 | 3 |
BSUB ncbi | Bacillus subtilis subtilis 168 | 4 |
BSP36773 | Burkholderia sp. | 4 |
BPUM315750 ncbi | Bacillus pumilus SAFR-032 | 4 |
BPSE320373 ncbi | Burkholderia pseudomallei 668 | 4 |
BPSE320372 ncbi | Burkholderia pseudomallei 1710b | 4 |
BPSE272560 ncbi | Burkholderia pseudomallei K96243 | 4 |
BPET94624 | Bordetella petrii | 4 |
BPER257313 ncbi | Bordetella pertussis Tohama I | 4 |
BPAR257311 ncbi | Bordetella parapertussis 12822 | 4 |
BOVI236 | Brucella ovis | 3 |
BMEL224914 ncbi | Brucella melitensis bv. 1 str. 16M | 3 |
BMAL320389 ncbi | Burkholderia mallei NCTC 10247 | 4 |
BMAL320388 ncbi | Burkholderia mallei SAVP1 | 4 |
BMAL243160 ncbi | Burkholderia mallei ATCC 23344 | 4 |
BLIC279010 ncbi | Bacillus licheniformis ATCC 14580 | 4 |
BJAP224911 ncbi | Bradyrhizobium japonicum USDA 110 | 4 |
BHAL272558 ncbi | Bacillus halodurans C-125 | 4 |
BFRA295405 ncbi | Bacteroides fragilis YCH46 | 3 |
BFRA272559 ncbi | Bacteroides fragilis NCTC 9343 | 3 |
BCLA66692 ncbi | Bacillus clausii KSM-K16 | 4 |
BCER572264 ncbi | Bacillus cereus 03BB102 | 4 |
BCER405917 | Bacillus cereus W | 4 |
BCER315749 ncbi | Bacillus cytotoxicus NVH 391-98 | 4 |
BCER288681 ncbi | Bacillus cereus E33L | 4 |
BCER226900 ncbi | Bacillus cereus ATCC 14579 | 4 |
BCEN331272 ncbi | Burkholderia cenocepacia HI2424 | 4 |
BCEN331271 ncbi | Burkholderia cenocepacia AU 1054 | 4 |
BCAN483179 ncbi | Brucella canis ATCC 23365 | 3 |
BBRO257310 ncbi | Bordetella bronchiseptica RB50 | 4 |
BANT592021 ncbi | Bacillus anthracis A0248 | 4 |
BANT568206 ncbi | Bacillus anthracis CDC 684 | 4 |
BANT261594 ncbi | Bacillus anthracis Ames Ancestor | 4 |
BANT260799 ncbi | Bacillus anthracis Sterne | 4 |
BAMY326423 ncbi | Bacillus amyloliquefaciens FZB42 | 4 |
BAMB398577 ncbi | Burkholderia ambifaria MC40-6 | 4 |
BAMB339670 ncbi | Burkholderia ambifaria AMMD | 4 |
ASP62977 ncbi | Acinetobacter sp. ADP1 | 4 |
ASP232721 ncbi | Acidovorax sp. JS42 | 4 |
APLE434271 ncbi | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 4 |
APLE416269 ncbi | Actinobacillus pleuropneumoniae L20 | 4 |
AORE350688 ncbi | Alkaliphilus oremlandii OhILAs | 4 |
AMET293826 ncbi | Alkaliphilus metalliredigens QYMF | 4 |
AHYD196024 | Aeromonas hydrophila dhakensis | 4 |
ADEH290397 ncbi | Anaeromyxobacter dehalogenans 2CP-C | 3 |
ABOR393595 ncbi | Alcanivorax borkumensis SK2 | 4 |
ABAU360910 ncbi | Bordetella avium 197N | 4 |
AAVE397945 ncbi | Acidovorax citrulli AAC00-1 | 4 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 1.764e-14 | 73 | 92 |
Arrangment:Clusters | 0.0001313 | 15 | 17 |
Arrangment:Pairs | 7.752e-20 | 91 | 112 |
Disease:Dysentery | 0.0064563 | 6 | 6 |
Disease:Pneumonia | 0.0006277 | 11 | 12 |
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever | 0.0000907 | 11 | 11 |
Disease:Wide_range_of_infections | 0.0000907 | 11 | 11 |
Endospores:No | 0.0063717 | 79 | 211 |
Endospores:Yes | 3.827e-9 | 43 | 53 |
GC_Content_Range4:60-100 | 0.0003418 | 46 | 145 |
GC_Content_Range7:30-40 | 0.0064269 | 84 | 166 |
GC_Content_Range7:60-70 | 0.0008145 | 43 | 134 |
Genome_Size_Range5:0-2 | 1.961e-11 | 33 | 155 |
Genome_Size_Range5:4-6 | 1.210e-6 | 106 | 184 |
Genome_Size_Range9:1-2 | 1.816e-6 | 33 | 128 |
Genome_Size_Range9:4-5 | 0.0060937 | 52 | 96 |
Genome_Size_Range9:5-6 | 0.0001109 | 54 | 88 |
Gram_Stain:Gram_Pos | 1.632e-14 | 105 | 150 |
Habitat:Aquatic | 0.0001321 | 24 | 91 |
Habitat:Multiple | 0.0002297 | 96 | 178 |
Habitat:Specialized | 0.0035519 | 14 | 53 |
Habitat:Terrestrial | 0.0079918 | 20 | 31 |
Motility:Yes | 0.0017334 | 132 | 267 |
Optimal_temp.:- | 0.0013976 | 95 | 257 |
Optimal_temp.:30-37 | 5.263e-6 | 17 | 18 |
Optimal_temp.:35-37 | 0.0000162 | 13 | 13 |
Oxygen_Req:Aerobic | 3.442e-7 | 53 | 185 |
Oxygen_Req:Facultative | 1.224e-18 | 137 | 201 |
Oxygen_Req:Microaerophilic | 0.0004209 | 1 | 18 |
Pathogenic_in:Human | 1.090e-9 | 127 | 213 |
Pathogenic_in:No | 0.0001768 | 78 | 226 |
Shape:Coccus | 1.956e-6 | 55 | 82 |
Shape:Rod | 1.323e-8 | 183 | 347 |
Shape:Sphere | 0.0002461 | 1 | 19 |
Temp._range:Mesophilic | 0.0005547 | 220 | 473 |
Temp._range:Psychrophilic | 0.0005029 | 9 | 9 |
Org ID | Org Name | # genes in group found in org |
WPIP955 | Wolbachia pipientis | 1 |
WPIP80849 | Wolbachia endosymbiont of Brugia malayi | 1 |
UURE95667 | Ureaplasma urealyticum serovar 13 | 0 |
UURE95664 | Ureaplasma urealyticum serovar 10 | 0 |
UPAR505682 ncbi | Ureaplasma parvum serovar 3 str. ATCC 27815 | 0 |
UMET351160 ncbi | uncultured methanogenic archaeon RC-I | 0 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 0 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 0 |
TVOL273116 ncbi | Thermoplasma volcanium GSS1 | 0 |
TTHE300852 ncbi | Thermus thermophilus HB8 | 1 |
TPEN368408 ncbi | Thermofilum pendens Hrk 5 | 0 |
TPAL243276 ncbi | Treponema pallidum pallidum Nichols | 0 |
TDEN326298 ncbi | Sulfurimonas denitrificans DSM 1251 | 0 |
TACI273075 ncbi | Thermoplasma acidophilum DSM 1728 | 0 |
STRO369723 ncbi | Salinispora tropica CNB-440 | 0 |
STOK273063 ncbi | Sulfolobus tokodaii 7 | 0 |
SSP84588 ncbi | Synechococcus sp. WH 8102 | 1 |
SSP64471 ncbi | Synechococcus sp. CC9311 | 1 |
SSP387093 ncbi | Sulfurovum sp. NBC37-1 | 1 |
SSP1131 | Synechococcus sp. CC9605 | 1 |
SSOL273057 ncbi | Sulfolobus solfataricus P2 | 0 |
SRUB309807 ncbi | Salinibacter ruber DSM 13855 | 0 |
SMAR399550 ncbi | Staphylothermus marinus F1 | 0 |
SARE391037 ncbi | Salinispora arenicola CNS-205 | 0 |
SACI330779 ncbi | Sulfolobus acidocaldarius DSM 639 | 0 |
RTYP257363 ncbi | Rickettsia typhi Wilmington | 1 |
RSPH349102 ncbi | Rhodobacter sphaeroides ATCC 17025 | 1 |
RSPH349101 ncbi | Rhodobacter sphaeroides ATCC 17029 | 1 |
RSPH272943 ncbi | Rhodobacter sphaeroides 2.4.1 | 1 |
RSP357808 ncbi | Roseiflexus sp. RS-1 | 1 |
RSAL288705 ncbi | Renibacterium salmoninarum ATCC 33209 | 0 |
RPRO272947 ncbi | Rickettsia prowazekii Madrid E | 0 |
RPAL316056 ncbi | Rhodopseudomonas palustris BisB18 | 1 |
RLEG216596 ncbi | Rhizobium leguminosarum bv. viciae 3841 | 1 |
RFEL315456 ncbi | Rickettsia felis URRWXCal2 | 1 |
RETL347834 ncbi | Rhizobium etli CFN 42 | 1 |
RCAS383372 ncbi | Roseiflexus castenholzii DSM 13941 | 1 |
PTOR263820 ncbi | Picrophilus torridus DSM 9790 | 0 |
PSP117 | Pirellula sp. | 0 |
PMOB403833 ncbi | Petrotoga mobilis SJ95 | 1 |
PMAR93060 ncbi | Prochlorococcus marinus MIT 9215 | 1 |
PMAR74547 ncbi | Prochlorococcus marinus MIT 9313 | 1 |
PMAR74546 ncbi | Prochlorococcus marinus MIT 9312 | 1 |
PMAR59920 ncbi | Prochlorococcus marinus NATL2A | 0 |
PMAR167555 ncbi | Prochlorococcus marinus NATL1A | 0 |
PMAR167546 ncbi | Prochlorococcus marinus MIT 9301 | 0 |
PMAR167542 ncbi | Prochlorococcus marinus MIT 9515 | 0 |
PMAR167540 | Prochlorococcus marinus pastoris MED4ax | 0 |
PMAR167539 ncbi | Prochlorococcus marinus marinus CCMP1375 | 1 |
PMAR146891 ncbi | Prochlorococcus marinus AS9601 | 1 |
PLUT319225 ncbi | Chlorobium luteolum DSM 273 | 1 |
PISL384616 ncbi | Pyrobaculum islandicum DSM 4184 | 0 |
PHOR70601 ncbi | Pyrococcus horikoshii OT3 | 0 |
PDIS435591 ncbi | Parabacteroides distasonis ATCC 8503 | 0 |
PAST100379 | Onion yellows phytoplasma | 0 |
PARS340102 ncbi | Pyrobaculum arsenaticum DSM 13514 | 0 |
PAER178306 ncbi | Pyrobaculum aerophilum IM2 | 0 |
OTSU357244 ncbi | Orientia tsutsugamushi Boryong | 0 |
NWIN323098 ncbi | Nitrobacter winogradskyi Nb-255 | 0 |
NSP387092 ncbi | Nitratiruptor sp. SB155-2 | 0 |
NSEN222891 ncbi | Neorickettsia sennetsu Miyayama | 0 |
NPHA348780 ncbi | Natronomonas pharaonis DSM 2160 | 0 |
NHAM323097 ncbi | Nitrobacter hamburgensis X14 | 1 |
NFAR247156 ncbi | Nocardia farcinica IFM 10152 | 0 |
MTUB419947 ncbi | Mycobacterium tuberculosis H37Ra | 0 |
MTUB336982 ncbi | Mycobacterium tuberculosis F11 | 0 |
MTHE349307 ncbi | Methanosaeta thermophila PT | 0 |
MTHE187420 ncbi | Methanothermobacter thermautotrophicus Delta H | 0 |
MTBRV ncbi | Mycobacterium tuberculosis H37Rv | 0 |
MTBCDC ncbi | Mycobacterium tuberculosis CDC1551 | 0 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 0 |
MSTA339860 ncbi | Methanosphaera stadtmanae DSM 3091 | 0 |
MSP266779 ncbi | Chelativorans sp. BNC1 | 1 |
MSED399549 ncbi | Metallosphaera sedula DSM 5348 | 0 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 0 |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 0 |
MPEN272633 ncbi | Mycoplasma penetrans HF-2 | 0 |
MMYC272632 ncbi | Mycoplasma mycoides mycoides SC str. PG1 | 0 |
MMOB267748 ncbi | Mycoplasma mobile 163K | 0 |
MMAZ192952 ncbi | Methanosarcina mazei Go1 | 0 |
MMAR394221 ncbi | Maricaulis maris MCS10 | 1 |
MMAR368407 ncbi | Methanoculleus marisnigri JR1 | 0 |
MLOT266835 ncbi | Mesorhizobium loti MAFF303099 | 1 |
MLEP272631 ncbi | Mycobacterium leprae TN | 0 |
MLAB410358 ncbi | Methanocorpusculum labreanum Z | 0 |
MKAN190192 ncbi | Methanopyrus kandleri AV19 | 0 |
MJAN243232 ncbi | Methanocaldococcus jannaschii DSM 2661 | 0 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 0 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 0 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 0 |
MGEN243273 ncbi | Mycoplasma genitalium G37 | 0 |
MCAP340047 ncbi | Mycoplasma capricolum capricolum ATCC 27343 | 0 |
MBUR259564 ncbi | Methanococcoides burtonii DSM 6242 | 0 |
MBOV410289 ncbi | Mycobacterium bovis BCG str. Pasteur 1173P2 | 0 |
MBOV233413 ncbi | Mycobacterium bovis AF2122/97 | 0 |
MBAR269797 ncbi | Methanosarcina barkeri Fusaro | 0 |
MAVI243243 ncbi | Mycobacterium avium 104 | 0 |
MART243272 ncbi | Mycoplasma arthritidis 158L3-1 | 0 |
MAEO419665 ncbi | Methanococcus aeolicus Nankai-3 | 0 |
MACE188937 ncbi | Methanosarcina acetivorans C2A | 0 |
MABS561007 ncbi | Mycobacterium abscessus ATCC 19977 | 0 |
LINT363253 ncbi | Lawsonia intracellularis PHE/MN1-00 | 1 |
LINT267671 ncbi | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | 0 |
LINT189518 ncbi | Leptospira interrogans serovar Lai str. 56601 | 0 |
LBOR355277 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis JB197 | 0 |
LBOR355276 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis L550 | 0 |
LBIF456481 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) | 0 |
LBIF355278 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) | 0 |
IHOS453591 ncbi | Ignicoccus hospitalis KIN4/I | 0 |
HWAL362976 ncbi | Haloquadratum walsbyi DSM 16790 | 1 |
HSP64091 ncbi | Halobacterium sp. NRC-1 | 0 |
HSAL478009 ncbi | Halobacterium salinarum R1 | 0 |
HPYL85963 ncbi | Helicobacter pylori J99 | 0 |
HPYL357544 ncbi | Helicobacter pylori HPAG1 | 0 |
HPY ncbi | Helicobacter pylori 26695 | 0 |
HNEP81032 | Hyphomonas neptunium | 1 |
HMUK485914 ncbi | Halomicrobium mukohataei DSM 12286 | 0 |
HMAR272569 ncbi | Haloarcula marismortui ATCC 43049 | 0 |
HHEP235279 ncbi | Helicobacter hepaticus ATCC 51449 | 0 |
HBUT415426 ncbi | Hyperthermus butylicus DSM 5456 | 0 |
HAUR316274 ncbi | Herpetosiphon aurantiacus ATCC 23779 | 1 |
HACI382638 ncbi | Helicobacter acinonychis Sheeba | 0 |
GFOR411154 ncbi | Gramella forsetii KT0803 | 1 |
FSUC59374 ncbi | Fibrobacter succinogenes succinogenes S85 | 1 |
FSP1855 | Frankia sp. EAN1pec | 0 |
FSP106370 ncbi | Frankia sp. CcI3 | 0 |
FJOH376686 ncbi | Flavobacterium johnsoniae UW101 | 1 |
FALN326424 ncbi | Frankia alni ACN14a | 0 |
ERUM302409 ncbi | Ehrlichia ruminantium Gardel | 1 |
ERUM254945 ncbi | Ehrlichia ruminantium Welgevonden | 1 |
ECHA205920 ncbi | Ehrlichia chaffeensis Arkansas | 1 |
ECAN269484 ncbi | Ehrlichia canis Jake | 0 |
DSP255470 ncbi | Dehalococcoides sp. CBDB1 | 1 |
DSP216389 ncbi | Dehalococcoides sp. BAV1 | 1 |
DOLE96561 ncbi | Desulfococcus oleovorans Hxd3 | 1 |
DETH243164 ncbi | Dehalococcoides ethenogenes 195 | 1 |
CTRA471473 ncbi | Chlamydia trachomatis L2b/UCH-1/proctitis | 0 |
CTRA471472 ncbi | Chlamydia trachomatis 434/Bu | 0 |
CTEP194439 ncbi | Chlorobium tepidum TLS | 1 |
CSUL444179 ncbi | Candidatus Sulcia muelleri GWSS | 0 |
CSP78 | Caulobacter sp. | 1 |
CPRO264201 ncbi | Candidatus Protochlamydia amoebophila UWE25 | 1 |
CPNE182082 ncbi | Chlamydophila pneumoniae TW-183 | 1 |
CPNE138677 ncbi | Chlamydophila pneumoniae J138 | 1 |
CPNE115713 ncbi | Chlamydophila pneumoniae CWL029 | 1 |
CPNE115711 ncbi | Chlamydophila pneumoniae AR39 | 1 |
CPEL335992 ncbi | Candidatus Pelagibacter ubique HTCC1062 | 1 |
CMUR243161 ncbi | Chlamydia muridarum Nigg | 0 |
CMET456442 ncbi | Candidatus Methanoregula boonei 6A8 | 0 |
CMAQ397948 ncbi | Caldivirga maquilingensis IC-167 | 0 |
CKOR374847 ncbi | Candidatus Korarchaeum cryptofilum OPF8 | 0 |
CJEJ407148 ncbi | Campylobacter jejuni jejuni 81116 | 1 |
CJEJ360109 ncbi | Campylobacter jejuni doylei 269.97 | 0 |
CJEJ354242 ncbi | Campylobacter jejuni jejuni 81-176 | 1 |
CJEJ195099 ncbi | Campylobacter jejuni RM1221 | 0 |
CJEJ192222 ncbi | Campylobacter jejuni jejuni NCTC 11168 | 0 |
CJEI306537 ncbi | Corynebacterium jeikeium K411 | 0 |
CHUT269798 ncbi | Cytophaga hutchinsonii ATCC 33406 | 0 |
CHOM360107 ncbi | Campylobacter hominis ATCC BAA-381 | 0 |
CFEL264202 ncbi | Chlamydophila felis Fe/C-56 | 1 |
CDES477974 ncbi | Candidatus Desulforudis audaxviator MP104C | 1 |
CCHL340177 ncbi | Chlorobium chlorochromatii CaD3 | 1 |
CCAV227941 ncbi | Chlamydophila caviae GPIC | 1 |
CABO218497 ncbi | Chlamydophila abortus S26/3 | 1 |
BXEN266265 ncbi | Burkholderia xenovorans LB400 | 1 |
BTUR314724 ncbi | Borrelia turicatae 91E135 | 0 |
BTRI382640 ncbi | Bartonella tribocorum CIP 105476 | 1 |
BSP376 | Bradyrhizobium sp. | 1 |
BQUI283165 ncbi | Bartonella quintana Toulouse | 1 |
BMEL359391 ncbi | Brucella melitensis biovar Abortus 2308 | 1 |
BHER314723 ncbi | Borrelia hermsii DAH | 0 |
BHEN283166 ncbi | Bartonella henselae Houston-1 | 1 |
BGAR290434 ncbi | Borrelia garinii PBi | 0 |
BBUR224326 ncbi | Borrelia burgdorferi B31 | 0 |
BBAC360095 ncbi | Bartonella bacilliformis KC583 | 1 |
BBAC264462 ncbi | Bdellovibrio bacteriovorus HD100 | 1 |
BAPH372461 ncbi | Buchnera aphidicola Cc (Cinara cedri) | 0 |
BAFZ390236 ncbi | Borrelia afzelii PKo | 0 |
BABO262698 ncbi | Brucella abortus bv. 1 str. 9-941 | 1 |
AYEL322098 ncbi | Aster yellows witches-broom phytoplasma AYWB | 0 |
AURANTIMONAS | Aurantimonas manganoxydans SI85-9A1 | 0 |
APHA212042 ncbi | Anaplasma phagocytophilum HZ | 1 |
APER272557 ncbi | Aeropyrum pernix K1 | 0 |
AMAR234826 ncbi | Anaplasma marginale St. Maries | 0 |
ALAI441768 ncbi | Acholeplasma laidlawii PG-8A | 1 |
AFUL224325 ncbi | Archaeoglobus fulgidus DSM 4304 | 0 |
ACEL351607 ncbi | Acidothermus cellulolyticus 11B | 0 |
ACAU438753 ncbi | Azorhizobium caulinodans ORS 571 | 1 |
ABUT367737 ncbi | Arcobacter butzleri RM4018 | 0 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 1.712e-6 | 10 | 92 |
Arrangment:Pairs | 1.254e-13 | 5 | 112 |
Disease:Leptospirosis | 0.0081087 | 4 | 4 |
Disease:Pharyngitis | 0.0000616 | 8 | 8 |
Disease:bronchitis_and_pneumonitis | 0.0000616 | 8 | 8 |
Endospores:No | 4.874e-7 | 90 | 211 |
Endospores:Yes | 0.0000298 | 4 | 53 |
GC_Content_Range4:0-40 | 0.0010433 | 80 | 213 |
GC_Content_Range4:40-60 | 0.0047138 | 55 | 224 |
GC_Content_Range7:0-30 | 0.0000341 | 27 | 47 |
GC_Content_Range7:50-60 | 0.0048687 | 22 | 107 |
Genome_Size_Range5:0-2 | 1.431e-18 | 91 | 155 |
Genome_Size_Range5:4-6 | 1.788e-8 | 28 | 184 |
Genome_Size_Range9:0-1 | 2.096e-7 | 21 | 27 |
Genome_Size_Range9:1-2 | 2.650e-11 | 70 | 128 |
Genome_Size_Range9:4-5 | 0.0023893 | 18 | 96 |
Genome_Size_Range9:5-6 | 5.526e-6 | 10 | 88 |
Gram_Stain:Gram_Pos | 9.551e-7 | 23 | 150 |
Habitat:Host-associated | 0.0009325 | 78 | 206 |
Habitat:Multiple | 8.563e-7 | 30 | 178 |
Habitat:Specialized | 0.0004759 | 27 | 53 |
Habitat:Terrestrial | 0.0045143 | 3 | 31 |
Motility:Yes | 0.0079533 | 69 | 267 |
Optimal_temp.:37 | 0.0010777 | 45 | 106 |
Oxygen_Req:Facultative | 3.599e-8 | 33 | 201 |
Pathogenic_in:Cattle | 0.0007126 | 6 | 6 |
Salinity:Extreme_halophilic | 0.0035187 | 6 | 7 |
Shape:Irregular_coccus | 0.0024106 | 11 | 17 |
Shape:Oval | 0.0024088 | 5 | 5 |
Shape:Pleomorphic | 0.0099209 | 6 | 8 |
Shape:Rod | 1.262e-10 | 70 | 347 |
Shape:Sphere | 0.0000104 | 15 | 19 |
Shape:Spiral | 5.463e-7 | 24 | 34 |
Temp._range:Hyperthermophilic | 0.0014035 | 14 | 23 |
Temp._range:Mesophilic | 0.0013664 | 130 | 473 |
Temp._range:Thermophilic | 0.0088071 | 17 | 35 |
Pathway or complex | # Orgs containing it | # of those orgs also containing candidate | Pearson Coeff |
SERDEG-PWY (L-serine degradation) | 349 | 231 | 0.5165 |
PWY-5497 (purine nucleotides degradation IV (anaerobic)) | 122 | 116 | 0.5134 |
P122-PWY (heterolactic fermentation) | 119 | 113 | 0.5044 |
PWY0-1314 (fructose degradation) | 224 | 165 | 0.4558 |
TREDEGLOW-PWY (trehalose degradation I (low osmolarity)) | 121 | 107 | 0.4450 |
IDNCAT-PWY (L-idonate degradation) | 246 | 174 | 0.4437 |
PWY-5493 (reductive monocarboxylic acid cycle) | 243 | 172 | 0.4401 |
TEICHOICACID-PWY (teichoic acid (poly-glycerol) biosynthesis) | 98 | 92 | 0.4390 |
PWY0-1295 (pyrimidine ribonucleosides degradation I) | 239 | 169 | 0.4330 |
PWY-5480 (pyruvate fermentation to ethanol I) | 109 | 98 | 0.4311 |
SALVADEHYPOX-PWY (salvage pathways of adenine, hypoxanthine, and their nucleosides) | 485 | 266 | 0.4291 |
P163-PWY (lysine fermentation to acetate and butyrate) | 367 | 224 | 0.4235 |
PWY-5676 (acetyl-CoA fermentation to butyrate II) | 284 | 188 | 0.4191 |
PWY-6196 (serine racemization) | 102 | 92 | 0.4168 |
GLUAMCAT-PWY (N-acetylglucosamine degradation I) | 356 | 218 | 0.4131 |
PWY-5485 (pyruvate fermentation to acetate IV) | 398 | 233 | 0.4036 |
EG12129 | EG12098 | EG10548 | |
G6517 | 0.999983 | 0.998767 | 0.998601 |
EG12129 | 0.998854 | 0.998567 | |
EG12098 | 0.999536 | ||
EG10548 |
G6517 | EG12129 | EG12098 | EG10548 | |
G6517 | 0.0f0 | 1.5e-63 | - | - |
EG12129 | 1.5e-65 | 0.0f0 | - | - |
EG12098 | - | - | 0.0f0 | - |
EG10548 | - | - | - | 0.0f0 |