CANDIDATE ID: 977

CANDIDATE ID: 977

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9902617e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G6517 (rutG) (b1006)
   Products of gene:
     - B1006-MONOMER (predicted xanthine/uracil transporter)

- EG12098 (rluD) (b2594)
   Products of gene:
     - EG12098-MONOMER (23S rRNA pseudouridine synthase)
       Reactions:
        rRNA  ->  rRNA containing pseudouridine

- EG11118 (rluC) (b1086)
   Products of gene:
     - EG11118-MONOMER (23S rRNA pseudouridine synthase)
       Reactions:
        rRNA  ->  rRNA containing pseudouridine

- EG10548 (lspA) (b0027)
   Products of gene:
     - EG10548-MONOMER (prolipoprotein signal peptidase II)
       Reactions:
        EC# 3.4.23.36



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 351
Effective number of orgs (counting one per cluster within 468 clusters): 232

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F3
YPES377628 ncbi Yersinia pestis Nepal5163
YPES360102 ncbi Yersinia pestis Antiqua3
YPES349746 ncbi Yersinia pestis Angola3
YPES214092 ncbi Yersinia pestis CO923
YPES187410 ncbi Yersinia pestis KIM 103
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula13
XFAS160492 ncbi Xylella fastidiosa 9a5c3
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
XAUT78245 ncbi Xanthobacter autotrophicus Py23
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-23
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79013
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB43
TSP28240 Thermotoga sp.3
TSP1755 Thermoanaerobacter sp.4
TROS309801 ncbi Thermomicrobium roseum DSM 51593
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TPET390874 ncbi Thermotoga petrophila RKU-13
TMAR243274 ncbi Thermotoga maritima MSB83
TLET416591 ncbi Thermotoga lettingae TMO3
TELO197221 ncbi Thermosynechococcus elongatus BP-13
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252593
TCRU317025 ncbi Thiomicrospira crunogena XCL-23
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE322159 ncbi Streptococcus thermophilus LMD-94
STHE299768 ncbi Streptococcus thermophilus CNRZ10664
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
STHE264199 ncbi Streptococcus thermophilus LMG 183114
SSUI391295 ncbi Streptococcus suis 05ZYH333
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSP292414 ncbi Ruegeria sp. TM10403
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SPYO370554 ncbi Streptococcus pyogenes MGAS107504
SPYO370553 ncbi Streptococcus pyogenes MGAS20963
SPYO370552 ncbi Streptococcus pyogenes MGAS102704
SPYO370551 ncbi Streptococcus pyogenes MGAS94294
SPYO319701 ncbi Streptococcus pyogenes MGAS61804
SPYO293653 ncbi Streptococcus pyogenes MGAS50054
SPYO286636 ncbi Streptococcus pyogenes MGAS103944
SPYO198466 ncbi Streptococcus pyogenes MGAS3154
SPYO193567 ncbi Streptococcus pyogenes SSI-14
SPYO186103 ncbi Streptococcus pyogenes MGAS82324
SPYO160490 ncbi Streptococcus pyogenes M1 GAS4
SPRO399741 ncbi Serratia proteamaculans 5684
SPNE488221 ncbi Streptococcus pneumoniae 705853
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-63
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-143
SPNE171101 ncbi Streptococcus pneumoniae R63
SPNE170187 ncbi Streptococcus pneumoniae G543
SPNE1313 Streptococcus pneumoniae3
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMUT210007 ncbi Streptococcus mutans UA1594
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4193
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGOR29390 Streptococcus gordonii Challis4
SGLO343509 ncbi Sodalis glossinidius morsitans3
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63013
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-403
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4763
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SAGA211110 ncbi Streptococcus agalactiae NEM3164
SAGA208435 ncbi Streptococcus agalactiae 2603V/R4
SAGA205921 ncbi Streptococcus agalactiae A9094
SACI56780 ncbi Syntrophus aciditrophicus SB3
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99413
RSOL267608 ncbi Ralstonia solanacearum GMI10003
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RPAL316057 ncbi Rhodopseudomonas palustris BisB53
RPAL316055 ncbi Rhodopseudomonas palustris BisA533
RPAL258594 ncbi Rhodopseudomonas palustris CGA0093
RMET266264 ncbi Ralstonia metallidurans CH344
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
PTHE370438 ncbi Pelotomaculum thermopropionicum SI3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-13
PSP296591 ncbi Polaromonas sp. JS6664
PRUM264731 ncbi Prevotella ruminicola 233
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257453
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO13
PINT246198 Prevotella intermedia 173
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PATL342610 ncbi Pseudoalteromonas atlantica T6c3
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8313
OCAR504832 ncbi Oligotropha carboxidovorans OM53
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NOCE323261 ncbi Nitrosococcus oceani ATCC 197073
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C913
NEUR228410 ncbi Nitrosomonas europaea ATCC 197183
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MXAN246197 ncbi Myxococcus xanthus DK 16223
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL14
MPET420662 ncbi Methylibium petroleiphilum PM13
MFLA265072 ncbi Methylobacillus flagellatus KT3
MEXT419610 ncbi Methylobacterium extorquens PA13
MCAP243233 ncbi Methylococcus capsulatus Bath3
MAQU351348 ncbi Marinobacter aquaeolei VT84
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53344
LSPH444177 ncbi Lysinibacillus sphaericus C3-413
LSAK314315 ncbi Lactobacillus sakei sakei 23K4
LREU557436 ncbi Lactobacillus reuteri DSM 200163
LPNE400673 ncbi Legionella pneumophila Corby3
LPNE297246 ncbi Legionella pneumophila Paris3
LPNE297245 ncbi Legionella pneumophila Lens3
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 13
LPLA220668 ncbi Lactobacillus plantarum WCFS13
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82933
LLAC272623 ncbi Lactococcus lactis lactis Il14034
LLAC272622 ncbi Lactococcus lactis cremoris SK114
LJOH257314 ncbi Lactobacillus johnsonii NCC 5333
LINN272626 ncbi Listeria innocua Clip112624
LHEL405566 ncbi Lactobacillus helveticus DPC 45714
LGAS324831 ncbi Lactobacillus gasseri ATCC 333234
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118424
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3654
LCHO395495 ncbi Leptothrix cholodnii SP-63
LCAS321967 ncbi Lactobacillus casei ATCC 3344
LBRE387344 ncbi Lactobacillus brevis ATCC 3674
LACI272621 ncbi Lactobacillus acidophilus NCFM4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR3
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE3
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL13
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans3
GVIO251221 ncbi Gloeobacter violaceus PCC 74213
GURA351605 ncbi Geobacter uraniireducens Rf43
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GOXY290633 ncbi Gluconobacter oxydans 621H3
GMET269799 ncbi Geobacter metallireducens GS-153
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-003
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL401614 ncbi Francisella novicida U1123
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL393011 ncbi Francisella tularensis holarctica OSU183
FTUL351581 Francisella tularensis holarctica FSC2003
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B13
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25943
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DRED349161 ncbi Desulfotomaculum reducens MI-14
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G203
DARO159087 ncbi Dechloromonas aromatica RCB3
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CTET212717 ncbi Clostridium tetani E884
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)3
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPER289380 ncbi Clostridium perfringens SM1013
CPER195103 ncbi Clostridium perfringens ATCC 131243
CPER195102 ncbi Clostridium perfringens 133
CNOV386415 ncbi Clostridium novyi NT3
CKLU431943 ncbi Clostridium kluyveri DSM 5554
CJAP155077 Cellvibrio japonicus3
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CDIF272563 ncbi Clostridium difficile 6303
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3313
CBUR227377 ncbi Coxiella burnetii RSA 4933
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto4
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBOT498213 ncbi Clostridium botulinum B1 str. Okra4
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CAULO ncbi Caulobacter crescentus CB153
CACE272562 ncbi Clostridium acetobutylicum ATCC 8243
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSUB ncbi Bacillus subtilis subtilis 1684
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)3
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis3
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCIC186490 Candidatus Baumannia cicadellinicola3
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)3
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
ASP76114 ncbi Aromatoleum aromaticum EbN13
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH723
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AORE350688 ncbi Alkaliphilus oremlandii OhILAs3
AMET293826 ncbi Alkaliphilus metalliredigens QYMF3
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232703
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-13
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  G6517   EG12098   EG11118   EG10548   
YPSE349747 YPSIP31758_1236YPSIP31758_3214YPSIP31758_1570YPSIP31758_3459
YPSE273123 YPTB2793YPTB0846YPTB2478YPTB0618
YPES386656 YPDSF_2913YPDSF_1855YPDSF_3156
YPES377628 YPN_0819YPN_2037YPN_0348
YPES360102 YPA_2768YPA_1934YPA_4069
YPES349746 YPANGOLA_A3477YPANGOLA_A3506YPANGOLA_A0789
YPES214092 YPO3277YPO1591YPO0476
YPES187410 Y0912Y1750Y3699
YENT393305 YE1944YE0891YE1628YE0617
XORY360094 XOOORF_1543XOOORF_3349XOOORF_1575
XORY342109 XOO1481XOO2925XOO1513
XORY291331 XOO1597XOO3072XOO1627
XFAS405440 XFASM12_1918XFASM12_2175XFASM12_1577
XFAS183190 PD_1755PD_1982PD_1436
XFAS160492 XF0939XF2606XF2417
XCAM487884 XCC-B100_1103XCC-B100_2383XCC-B100_3182
XCAM316273 XCAORF_3429XCAORF_2363XCAORF_1385
XCAM314565 XC_1070XC_2099XC_3086
XCAM190485 XCC3088XCC2083XCC1156
XAXO190486 XAC3217XAC2112XAC1255
XAUT78245 XAUT_1985XAUT_4767XAUT_2206
VVUL216895 VV1_1902VV1_0484VV1_3016VV1_0506
VVUL196600 VV2513VV0713VV1267VV0688
VPAR223926 VP2283VP0559VP2061VP0535
VFIS312309 VF1926VF0564VF1747VF0468
VEIS391735 VEIS_0087VEIS_4787VEIS_2110
VCHO345073 VC0395_A1749VC0395_A0238VC0395_A1614VC0395_A0215
VCHO VC2171VC0709VC2028VC0683
TTUR377629 TERTU_1054TERTU_1710TERTU_1041
TTEN273068 TTE2407TTE1538TTE1538
TSP28240 TRQ2_0107TRQ2_0473TRQ2_0473
TSP1755 TETH514_2371TETH514_1821TETH514_1821TETH514_1822
TROS309801 TRD_1032TRD_1032TRD_1033
TPSE340099 TETH39_2266TETH39_1349TETH39_1349TETH39_1350
TPET390874 TPET_0108TPET_0458TPET_0458
TMAR243274 TM_0819TM_0462TM_0462
TLET416591 TLET_0654TLET_1015TLET_0665
TELO197221 TLL1538TLL1538TLR2420
TDEN292415 TBD_0810TBD_1563TBD_1858
TCRU317025 TCR_1370TCR_0704TCR_0496
SWOL335541 SWOL_1286SWOL_1286SWOL_1287
STYP99287 STM2497STM2662STM1187STM0047
STHE322159 STER_0556STER_0554STER_0554STER_0553
STHE299768 STR0524STR0522STR0522STR0521
STHE292459 STH226STH1243STH1243STH1242
STHE264199 STU0524STU0522STU0522STU0521
SSUI391295 SSU05_0786SSU05_0786SSU05_0785
SSP94122 SHEWANA3_1641SHEWANA3_3171SHEWANA3_2566SHEWANA3_3135
SSP644076 SCH4B_1573SCH4B_1076SCH4B_3472
SSP321327 CYA_0740CYA_0740CYA_1533
SSP292414 TM1040_2118TM1040_0291TM1040_0092
SSON300269 SSO_1024SSO_2720SSO_1106SSO_0032
SSED425104 SSED_2443SSED_3499SSED_2633SSED_1195
SSAP342451 SSP1573SSP1575SSP1575SSP1576
SPYO370554 MGAS10750_SPY0729MGAS10750_SPY0727MGAS10750_SPY0727MGAS10750_SPY0726
SPYO370553 MGAS2096_SPY0707MGAS2096_SPY0705MGAS2096_SPY0703
SPYO370552 MGAS10270_SPY0698MGAS10270_SPY0694MGAS10270_SPY0694MGAS10270_SPY0693
SPYO370551 MGAS9429_SPY0695MGAS9429_SPY0693MGAS9429_SPY0693MGAS9429_SPY0692
SPYO319701 M28_SPY0620M28_SPY0618M28_SPY0618M28_SPY0617
SPYO293653 M5005_SPY0640M5005_SPY0638M5005_SPY0638M5005_SPY0637
SPYO286636 M6_SPY0658M6_SPY0656M6_SPY0656M6_SPY0655
SPYO198466 SPYM3_0559SPYM3_0557SPYM3_0557SPYM3_0556
SPYO193567 SPS1295SPS1297SPS1297SPS1298
SPYO186103 SPYM18_0891SPYM18_0889SPYM18_0889SPYM18_0888
SPYO160490 SPY0831SPY0827SPY0827SPY0826
SPRO399741 SPRO_1818SPRO_0884SPRO_1899SPRO_0699
SPNE488221 SP70585_1351SP70585_0968SP70585_0968
SPNE487214 SPH_1427SPH_1038SPH_1038
SPNE487213 SPT_0941SPT_1270SPT_1270
SPNE171101 SPR1165SPR0830SPR0830
SPNE170187 SPN10082SPN06100SPN06100
SPNE1313 SPJ_1201SPJ_0869SPJ_0869
SPEA398579 SPEA_1965SPEA_3166SPEA_2503SPEA_1084
SONE211586 SO_2879SO_3579SO_2784SO_3531
SMUT210007 SMU_857SMU_854SMU_854SMU_853
SMEL266834 SMC02512SMC01275SMC01129
SMED366394 SMED_2911SMED_1019SMED_0026
SLOI323850 SHEW_1836SHEW_2950SHEW_1594SHEW_1100
SHIGELLA YCDGSFHBYCECLSPA
SHAL458817 SHAL_2334SHAL_3248SHAL_1768SHAL_1132
SHAE279808 SH1715SH1717SH1717SH1718
SGOR29390 SGO_1108SGO_1090SGO_1090SGO_1089
SGLO343509 SG0583SG1053SG0415
SFLE373384 SFV_1018SFV_2658SFV_1107SFV_0021
SFLE198214 AAN42635.1AAN44149.1AAN42709.1AAN41689.1
SEPI176280 SE_0875SE_0872SE_0872SE_0072
SEPI176279 SERP0765SERP0763SERP0763SERP0762
SENT454169 SEHA_C2756SEHA_C2879SEHA_C1299SEHA_C0050
SENT321314 SCH_2494SCH_2665SCH_1134SCH_0041
SENT295319 SPA0370SPA2523SPA1664SPA0048
SENT220341 STY2738STY2851STY1227STY0056
SENT209261 T0360T2618T1732T0049
SELO269084 SYC0437_DSYC0437_DSYC2365_D
SDYS300267 SDY_0981SDY_2837SDY_2065SDY_0049
SDEN318161 SDEN_1641SDEN_2863SDEN_2301SDEN_2722
SDEG203122 SDE_2551SDE_1620SDE_2565
SBOY300268 SBO_2518SBO_2629SBO_1977SBO_0026
SBAL402882 SHEW185_1777SHEW185_1086SHEW185_1708SHEW185_1122
SBAL399599 SBAL195_1821SBAL195_1119SBAL195_1751SBAL195_1157
SAUR93062 SACOL1211SACOL1209SACOL1209SACOL1208
SAUR93061 SAOUHSC_01165SAOUHSC_01163SAOUHSC_01163SAOUHSC_01162
SAUR426430 NWMN_1110NWMN_1108NWMN_1108NWMN_1107
SAUR418127 SAHV_1189SAHV_1187SAHV_1187SAHV_1186
SAUR367830 SAUSA300_1092SAUSA300_1090SAUSA300_1090SAUSA300_1089
SAUR359787 SAURJH1_1283SAURJH1_1281SAURJH1_1281SAURJH1_1280
SAUR359786 SAURJH9_1258SAURJH9_1256SAURJH9_1256SAURJH9_1255
SAUR282459 SAS1133SAS1131SAS1130
SAUR282458 SAR1175SAR1173SAR1173SAR1172
SAUR273036 SAB1063SAB1061SAB1061SAB1060
SAUR196620 MW1082MW1080MW1080MW1079
SAUR158879 SA1042SA1040SA1040SA1039
SAUR158878 SAV1199SAV1197SAV1197SAV1196
SAGA211110 GBS1211GBS1435GBS1435GBS1436
SAGA208435 SAG_1144SAG_1365SAG_1365SAG_1366
SAGA205921 SAK_1230SAK_1398SAK_1398SAK_1399
SACI56780 SYN_01800SYN_01800SYN_01453
RXYL266117 RXYL_2840RXYL_1482RXYL_2818
RSOL267608 RSC1628RSC1041RSC2459
RRUB269796 RRU_A1111RRU_A2659RRU_A2967
RPAL316058 RPB_0454RPB_2335RPB_4181
RPAL316057 RPD_0359RPD_3129RPD_4037
RPAL316055 RPE_0817RPE_3547RPE_1415
RPAL258594 RPA0368RPA3208RPA4376
RMET266264 RMET_0730RMET_1353RMET_2439RMET_2886
RFER338969 RFER_0069RFER_2314RFER_1721RFER_1431
REUT381666 H16_A0806H16_A1434H16_A2578H16_A3047
REUT264198 REUT_A2561REUT_A1344REUT_A2274REUT_A2746
PTHE370438 PTH_1818PTH_1818PTH_1819
PSYR223283 PSPTO_1129PSPTO_0827PSPTO_3840PSPTO_0807
PSYR205918 PSYR_0968PSYR_0726PSYR_1639PSYR_0711
PSTU379731 PST_3176PST_3642PST_2630PST_0965
PSP56811 PSYCPRWF_0564PSYCPRWF_1572PSYCPRWF_0480PSYCPRWF_1893
PSP312153 PNUC_0921PNUC_0390PNUC_1741
PSP296591 BPRO_0117BPRO_2615BPRO_3659BPRO_3850
PRUM264731 GFRORF0694GFRORF2236GFRORF2236
PPUT76869 PPUTGB1_0786PPUTGB1_0669PPUTGB1_1482PPUTGB1_0650
PPUT351746 PPUT_0773PPUT_0663PPUT_3808PPUT_0645
PPUT160488 PP_0745PP_0623PP_1906PP_0604
PPRO298386 PBPRA2907PBPRA3021PBPRA1187PBPRA0592
PPEN278197 PEPE_1124PEPE_0941PEPE_0941
PNAP365044 PNAP_0076PNAP_1865PNAP_3085PNAP_3230
PMUL272843 PM0018PM1719PM0992PM1663
PMEN399739 PMEN_0945PMEN_0969PMEN_1620PMEN_0954
PLUM243265 PLU1268PLU2840PLU0592
PINT246198 PIN_A1252PIN_A0401PIN_A0401
PING357804 PING_1629PING_3265PING_2207PING_3270
PHAL326442 PSHAB0378PSHAA0933PSHAA1815PSHAA0919
PFLU220664 PFL_5140PFL_5306PFL_1788PFL_5320
PFLU216595 PFLU0898PFLU0780PFLU4713PFLU0769
PFLU205922 PFL_4729PFL_4836PFL_4165PFL_4851
PENT384676 PSEEN0887PSEEN4680PSEEN1609PSEEN4691
PCRY335284 PCRYO_1196PCRYO_1127PCRYO_0283PCRYO_1352
PATL342610 PATL_1335PATL_2133PATL_3177
PARC259536 PSYC_1195PSYC_1257PSYC_0257PSYC_0363
PAER208964 PA4647PA4544PA2975PA4559
PAER208963 PA14_61480PA14_60210PA14_25580PA14_60360
OIHE221109 OB2293OB1486OB1485
OCAR504832 OCAR_7148OCAR_5710OCAR_7236
OANT439375 OANT_2859OANT_2083OANT_0161
NOCE323261 NOC_2550NOC_2844NOC_2276
NMUL323848 NMUL_A1976NMUL_A1065NMUL_A2655
NMEN374833 NMCC_1227NMCC_0661NMCC_1950NMCC_0390
NMEN272831 NMC1252NMC0654NMC0190NMC0384
NMEN122587 NMA1528NMA0908NMA0070NMA0623
NMEN122586 NMB_1315NMB_0704NMB_0198NMB_1832
NGON242231 NGO0589NGO0278NGO1783NGO0071
NEUT335283 NEUT_1230NEUT_1706NEUT_1438
NEUR228410 NE0505NE1456NE1148
NARO279238 SARO_3046SARO_2837SARO_3258
MXAN246197 MXAN_3352MXAN_5912MXAN_3944
MTHE264732 MOTH_0869MOTH_0869MOTH_0868
MSUC221988 MS1879MS1821MS1624MS1750
MSP409 M446_5089M446_6367M446_2219
MSP400668 MMWYL1_4298MMWYL1_3611MMWYL1_2303MMWYL1_4229
MPET420662 MPE_A2003MPE_A0657MPE_A3047
MFLA265072 MFLA_1612MFLA_1322MFLA_2207
MEXT419610 MEXT_1691MEXT_0278MEXT_2326
MCAP243233 MCA_0972MCA_1479MCA_2254
MAQU351348 MAQU_1980MAQU_0878MAQU_1875MAQU_0863
LWEL386043 LWE1858LWE1862LWE1862LWE1863
LSPH444177 BSPH_1460BSPH_1458BSPH_1458
LSAK314315 LSA0951LSA0949LSA0949LSA0948
LREU557436 LREU_0460LREU_0929LREU_0929
LPNE400673 LPC_0749LPC_1761LPC_2352
LPNE297246 LPP1287LPP2242LPP1000
LPNE297245 LPL1286LPL2214LPL0969
LPNE272624 LPG1333LPG2295LPG0938
LPLA220668 LP_2371LP_1781LP_1781
LMON265669 LMOF2365_1867LMOF2365_1871LMOF2365_1871LMOF2365_1872
LMON169963 LMO1839LMO1843LMO1843LMO1844
LMES203120 LEUM_1876LEUM_1373LEUM_1373
LLAC272623 L46118L25787L25787L0335
LLAC272622 LACR_1711LACR_1082LACR_1082LACR_1081
LJOH257314 LJ_0709LJ_1186LJ_1186
LINN272626 LIN1953LIN1957LIN1957LIN1958
LHEL405566 LHV_0581LHV_1258LHV_1258LHV_1259
LGAS324831 LGAS_0490LGAS_1014LGAS_1014LGAS_1015
LDEL390333 LDB0545LDB1022LDB1022LDB1021
LDEL321956 LBUL_0487LBUL_0930LBUL_0930LBUL_0929
LCHO395495 LCHO_2875LCHO_0591LCHO_1234
LCAS321967 LSEI_1456LSEI_1458LSEI_1458LSEI_1459
LBRE387344 LVIS_1729LVIS_0832LVIS_0832LVIS_0833
LACI272621 LBA0562LBA1151LBA1151LBA1152
KPNE272620 GKPORF_B5473GKPORF_B2249GKPORF_B5488.38GKPORF_B4287
JSP375286 MMA_0226MMA_1393MMA_1347MMA_0827
ILOI283942 IL1183IL1348IL1127
HSOM228400 HSM_0280HSM_0637HSM_1125HSM_0051
HSOM205914 HS_1342HS_0367HS_0714HS_0185
HMOD498761 HM1_2087HM1_2104HM1_2104HM1_2103
HINF71421 HI_1227HI_0176HI_0412HI_1006
HINF374930 CGSHIEE_03870CGSHIEE_02410CGSHIEE_00935
HINF281310 NTHI1941NTHI0264NTHI0536NTHI1181
HHAL349124 HHAL_2235HHAL_1241HHAL_1835
HDUC233412 HD_0998HD_0469HD_0645HD_0063
HCHE349521 HCH_04644HCH_05920HCH_02136HCH_05932
HARS204773 HEAR1926HEAR2087HEAR0520
GVIO251221 GLR0073GLR0073GLR0072
GURA351605 GURA_0881GURA_0881GURA_4314
GTHE420246 GTNG_1005GTNG_1003GTNG_1003GTNG_1002
GSUL243231 GSU_0932GSU_0082GSU_0082GSU_3135
GOXY290633 GOX0505GOX1665GOX1250
GMET269799 GMET_3435GMET_3435GMET_0352
GKAU235909 GK1148GK1146GK1146GK1145
FTUL458234 FTA_0738FTA_1911FTA_0456
FTUL418136 FTW_0699FTW_0131FTW_1265
FTUL401614 FTN_1264FTN_1655FTN_0440
FTUL393115 FTF1245FTF0055FTF0914C
FTUL393011 FTH_0701FTH_1741FTH_0427
FTUL351581 FTL_0699FTL_1804FTL_0435
FRANT RLUDRLUCLSPA
FPHI484022 FPHI_1420FPHI_0953FPHI_0398
FNOD381764 FNOD_1091FNOD_1102FNOD_1102
ESP42895 ENT638_1519ENT638_3074ENT638_1601ENT638_0585
ELIT314225 ELI_01180ELI_01345ELI_04470
EFER585054 EFER_0679EFER_0473EFER_1843EFER_0020
EFAE226185 EF_1720EF_1722EF_1722EF_1723
ECOO157 YCDGSFHBYCECLSPA
ECOL83334 ECS1252ECS3457ECS1464ECS0030
ECOL585397 ECED1_1162ECED1_3035ECED1_1229ECED1_0024
ECOL585057 ECIAI39_2149ECIAI39_2799ECIAI39_2075ECIAI39_0028
ECOL585056 ECUMN_1189ECUMN_2921ECUMN_1261ECUMN_0028
ECOL585055 EC55989_1117EC55989_2885EC55989_1198EC55989_0026
ECOL585035 ECS88_2668ECS88_2782ECS88_1099ECS88_0026
ECOL585034 ECIAI1_1051ECIAI1_2717ECIAI1_1121ECIAI1_0028
ECOL481805 ECOLC_2589ECOLC_1087ECOLC_2515ECOLC_3628
ECOL469008 ECBD_2588ECBD_1090ECBD_2515ECBD_3589
ECOL439855 ECSMS35_2119ECSMS35_2748ECSMS35_2041ECSMS35_0025
ECOL413997 ECB_01009ECB_02484ECB_01082ECB_00031
ECOL409438 ECSE_1068ECSE_2880ECSE_1149ECSE_0025
ECOL405955 APECO1_97APECO1_3936APECO1_168APECO1_1956
ECOL364106 UTI89_C2813UTI89_C2927UTI89_C1211UTI89_C0029
ECOL362663 ECP_1005ECP_2597ECP_1078ECP_0025
ECOL331111 ECE24377A_1124ECE24377A_2880ECE24377A_1208ECE24377A_0027
ECOL316407 ECK0997:JW5137:B1006ECK2592:JW2576:B2594ECK1071:JW1072:B1086ECK0028:JW0025:B0027
ECOL199310 C1143C3116C1355C0031
ECAR218491 ECA1256ECA3347ECA1790ECA3875
DRED349161 DRED_1317DRED_1673DRED_1673DRED_1688
DNOD246195 DNO_0662DNO_1311DNO_1001DNO_0084
DHAF138119 DSY2698DSY2865DSY1290DSY2866
DDES207559 DDE_1449DDE_1447DDE_2143
DARO159087 DARO_1604DARO_2006DARO_2630
CVIO243365 CV_3624CV_2192CV_1818CV_3568
CVES412965 COSY_0312COSY_0078COSY_0599
CTET212717 CTC_01612CTC_01614CTC_01614CTC_01615
CSAL290398 CSAL_2088CSAL_0497CSAL_1593CSAL_0482
CRUT413404 RMAG_0329RMAG_0072RMAG_0652
CPSY167879 CPS_4318CPS_3915CPS_2290CPS_1183
CPER289380 CPR_1486CPR_1818CPR_1818
CPER195103 CPF_1756CPF_2104CPF_2104
CPER195102 CPE1505CPE1850CPE1850
CNOV386415 NT01CX_0192NT01CX_1952NT01CX_1952
CKLU431943 CKL_1200CKL_1199CKL_1199CKL_1198
CJAP155077 CJA_3205CJA_1669CJA_3216
CHYD246194 CHY_2016CHY_1505CHY_1505CHY_1506
CDIF272563 CD2594CD2596CD2597
CBUR434922 COXBU7E912_0771COXBU7E912_1589COXBU7E912_1671
CBUR360115 COXBURSA331_A1194COXBURSA331_A0596COXBURSA331_A0509
CBUR227377 CBU_0757CBU_0487CBU_0397
CBOT536232 CLM_1716CLM_1713CLM_3375CLM_1712
CBOT515621 CLJ_B1581CLJ_B1578CLJ_B3237CLJ_B1577
CBOT508765 CLL_A2948CLL_A2432CLL_A2432
CBOT498213 CLD_3072CLD_3074CLD_1564CLD_3075
CBOT441772 CLI_1562CLI_1560CLI_3034CLI_1559
CBOT441771 CLC_1515CLC_1513CLC_2877CLC_1512
CBOT441770 CLB_1503CLB_1501CLB_3005CLB_1500
CBOT36826 CBO1479CBO1476CBO2980CBO1475
CBLO291272 BPEN_187BPEN_421BPEN_123
CBLO203907 BFL181BFL409BFL119
CBEI290402 CBEI_1715CBEI_1595CBEI_1595
CAULO CC0453CC1980CC0700
CACE272562 CAC2112CAC2114CAC2114
BWEI315730 BCERKBAB4_3717BCERKBAB4_3719BCERKBAB4_3719BCERKBAB4_3720
BVIE269482 BCEP1808_3098BCEP1808_1720BCEP1808_1031BCEP1808_2591
BTHU412694 BALH_3521BALH_3523BALH_3523BALH_3524
BTHU281309 BT9727_3632BT9727_3634BT9727_3634BT9727_3635
BTHA271848 BTH_I0252BTH_I2253BTH_I1708BTH_I0769
BSUI470137 BSUIS_B0443BSUIS_A1043BSUIS_A0150
BSUI204722 BR_A0442BR_1000BR_0149
BSUB BSU15480BSU15460BSU15460BSU15450
BSP36773 BCEP18194_A6359BCEP18194_A5094BCEP18194_A4224BCEP18194_A5845
BSP107806 BU401BU348BU148
BPUM315750 BPUM_1447BPUM_1445BPUM_1445BPUM_1444
BPSE320373 BURPS668_0279BURPS668_2168BURPS668_2801BURPS668_0966
BPSE320372 BURPS1710B_A0495BURPS1710B_A2534BURPS1710B_A3164BURPS1710B_A1180
BPSE272560 BPSL0282BPSL1532BPSL2451BPSL0905
BPET94624 BPET3536BPET1847BPET1743BPET2815
BPER257313 BP2269BP1147BP0477BP1752
BPAR257311 BPP2061BPP3198BPP3317BPP1983
BOVI236 GBOORFA0431GBOORF0995GBOORF0154
BMEL224914 BMEII0825BMEI0983BMEI1799
BMAL320389 BMA10247_3342BMA10247_1084BMA10247_1813BMA10247_2113
BMAL320388 BMASAVP1_A3006BMASAVP1_A1813BMASAVP1_A2490BMASAVP1_A2659
BMAL243160 BMA_3337BMA_1324BMA_0521BMA_2243
BLIC279010 BL02272BL02270BL02270BL02269
BJAP224911 BLL7186BLR7336BLL5366BLR7482
BHAL272558 BH2540BH2542BH2542BH2543
BCLA66692 ABC2337ABC2339ABC2339ABC2340
BCIC186490 BCI_0193BCI_0439BCI_0557
BCER572264 BCA_3992BCA_3996BCA_3996BCA_3997
BCER405917 BCE_3935BCE_3937BCE_3937BCE_3938
BCER315749 BCER98_2539BCER98_2541BCER98_2541BCER98_2542
BCER288681 BCE33L3649BCE33L3651BCE33L3651BCE33L3652
BCER226900 BC_3890BC_3892BC_3892BC_3893
BCEN331272 BCEN2424_3013BCEN2424_1793BCEN2424_1112BCEN2424_2513
BCEN331271 BCEN_2399BCEN_6286BCEN_0632BCEN_1902
BCAN483179 BCAN_B0444BCAN_A1016BCAN_A0154
BBRO257310 BB1455BB3598BB3768BB2171
BAPH198804 BUSG388BUSG336BUSG141
BANT592021 BAA_4053BAA_4057BAA_4057BAA_4058
BANT568206 BAMEG_0601BAMEG_0597BAMEG_0595
BANT261594 GBAA4029GBAA4031GBAA4031GBAA4032
BANT260799 BAS3741BAS3743BAS3743BAS3744
BAMY326423 RBAM_015310RBAM_015290RBAM_015290RBAM_015280
BAMB398577 BAMMC406_2923BAMMC406_1704BAMMC406_0992BAMMC406_2431
BAMB339670 BAMB_3058BAMB_1731BAMB_0988BAMB_2560
ASP76114 EBA4725EBA5443EBA4447
ASP62977 ACIAD0031ACIAD2897ACIAD0442ACIAD0021
ASP62928 AZO1018AZO1614AZO1204
ASP232721 AJS_0048AJS_1163AJS_1163AJS_3400
ASAL382245 ASA_0244ASA_2062ASA_0685
APLE434271 APJL_0106APJL_1141APJL_1921APJL_1545
APLE416269 APL_0105APL_1122APL_1877APL_1519
AORE350688 CLOS_0576CLOS_1417CLOS_1416
AMET293826 AMET_1684AMET_2796AMET_2797
AHYD196024 AHA_3056AHA_4073AHA_2240AHA_0683
AFER243159 AFE_2606AFE_0879AFE_2483
AEHR187272 MLG_2552MLG_1429MLG_0853
ADEH290397 ADEH_0054ADEH_1901ADEH_0056
ABOR393595 ABO_1990ABO_0476ABO_1061ABO_0460
ABAU360910 BAV0927BAV1219BAV1109BAV1410
AAVE397945 AAVE_0102AAVE_1417AAVE_1174AAVE_3451


Organism features enriched in list (features available for 330 out of the 351 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.006096919
Arrangment:Chains 8.407e-97692
Arrangment:Clusters 0.00458601517
Arrangment:Pairs 4.841e-1193112
Disease:Pneumonia 0.00099031212
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00177561111
Disease:Wide_range_of_infections 0.00177561111
Endospores:No 5.995e-889211
Endospores:Yes 0.00001594453
GC_Content_Range4:40-60 0.0052211140224
GC_Content_Range7:0-30 0.00393551847
GC_Content_Range7:50-60 0.001215374107
GC_Content_Range7:70-100 0.0091311211
Genome_Size_Range5:0-2 4.154e-1645155
Genome_Size_Range5:4-6 1.081e-10139184
Genome_Size_Range9:0-1 0.0000346527
Genome_Size_Range9:1-2 4.003e-1140128
Genome_Size_Range9:4-5 0.00034016996
Genome_Size_Range9:5-6 7.340e-77088
Gram_Stain:Gram_Neg 0.0013978205333
Gram_Stain:Gram_Pos 0.0003438102150
Habitat:Aquatic 0.00284124091
Habitat:Multiple 2.702e-7128178
Habitat:Specialized 0.00179782053
Motility:No 0.007027974151
Motility:Yes 0.0000788173267
Optimal_temp.:25-30 0.00807861619
Optimal_temp.:30-37 0.00042091718
Optimal_temp.:35-37 0.00055151313
Optimal_temp.:37 0.003032948106
Oxygen_Req:Aerobic 0.002222290185
Oxygen_Req:Anaerobic 0.000234542102
Oxygen_Req:Facultative 2.476e-18162201
Oxygen_Req:Microaerophilic 0.0089072518
Pathogenic_in:Animal 0.00397364766
Pathogenic_in:Human 0.0011706137213
Pathogenic_in:No 0.0059070115226
Shape:Coccobacillus 0.00177561111
Shape:Rod 8.747e-12236347
Shape:Sphere 0.0000291219
Shape:Spiral 2.766e-8434
Temp._range:Hyperthermophilic 0.0004722523
Temp._range:Mesophilic 0.0015996281473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 200
Effective number of orgs (counting one per cluster within 468 clusters): 173

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB271
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX1
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
SSUI391296 ncbi Streptococcus suis 98HAH331
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P20
SRUB309807 ncbi Salinibacter ruber DSM 138551
SMAR399550 ncbi Staphylothermus marinus F10
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SARE391037 ncbi Salinispora arenicola CNS-2050
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RFEL315456 ncbi Rickettsia felis URRWXCal21
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.0
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96011
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
JSP290400 ncbi Jannaschia sp. CCS11
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake0
DRAD243230 ncbi Deinococcus radiodurans R11
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE451
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  G6517   EG12098   EG11118   EG10548   
WSUC273121 WS0203
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724 TT_C1675
TPEN368408
TPAL243276
TKOD69014 TK1212
TFUS269800 TFU_1518
TDEN326298
TDEN243275 TDE_2251
TACI273075
STRO369723
STOK273063
SSUI391296 SSU98_1942
SSP84588 SYNW2326OR2545
SSP64471 GSYN2860
SSP387093 SUN_0066
SSP1131 SYNCC9605_2457
SSOL273057
SRUB309807 SRU_1189
SMAR399550
SCO SCO1450
SAVE227882 SAV6897
SARE391037
SACI330779
RTYP257363 RT0834
RSP357808 ROSERS_0254
RSP101510 RHA1_RO06786
RSAL288705
RPRO272947
RFEL315456 RF_1341
RDEN375451 RD1_1813
PTOR263820
PSP117
PMAR93060 P9215_09761
PMAR74547 PMT2109
PMAR74546 PMT9312_0885
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539 PRO_0219
PMAR146891 A9601_09461
PLUT319225 PLUT_0783
PISL384616
PHOR70601
PFUR186497 PF1240
PDIS435591
PAST100379
PARS340102
PAER178306
PACN267747 PPA0522
PABY272844 PAB1838
OTSU357244
NWIN323098 NWI_1394
NSP387092
NSP35761 NOCA_1488
NSEN222891
NPHA348780
NFAR247156
MVAN350058 MVAN_0717
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918 MKMS_0568
MSP164757 MJLS_0546
MSP164756 MMCS_0556
MSME246196 MSMEG_0810
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_0206
MMAR426368 MMARC7_1705
MMAR402880 MMARC5_0895
MMAR394221 MMAR10_2334
MMAR368407
MMAR267377 MMP0681
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_1416
MGIL350054 MFLV_0188
MGEN243273
MFLO265311 MFL387
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007
LXYL281090 LXX08910
LINT363253 LI1052
LINT267671
LINT189518
LBOR355277
LBOR355276
LBIF456481
LBIF355278
KRAD266940 KRAD_0461
JSP290400 JANN_3401
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032 HNE_1728
HMUK485914
HMAR272569
HHEP235279
HBUT415426
HACI382638
FSP1855
FSP106370
FALN326424
ERUM302409 ERGA_CDS_08510
ERUM254945 ERWE_CDS_08600
ECHA205920 ECH_1060
ECAN269484
DRAD243230 DR_2280
DOLE96561 DOLE_1190
CTRA471473
CTRA471472
CTEP194439 CT_1299
CSUL444179
CSP501479 CSE45_3827
CPRO264201 PC0355
CPNE182082 CPB0747
CPNE138677 CPJ0719
CPNE115713 CPN0719
CPNE115711 CP_0027
CPEL335992 SAR11_0607
CMUR243161
CMIC443906 CMM_2822
CMIC31964 CMS2998
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0337
CJEJ360109
CJEJ354242 CJJ81176_0384
CJEJ195099
CJEJ192222
CJEI306537 JK1873
CHUT269798
CHOM360107
CFET360106 CFF8240_0212
CFEL264202 CF0982
CDIP257309 DIP1438
CCUR360105 CCV52592_0593
CCON360104 CCC13826_0419
CCHL340177 CAG_1622
CCAV227941 CCA_00023
CABO218497 CAB023
BXEN266265 BXE_B1606
BTUR314724
BLON206672 BL0910
BHER314723
BGAR290434
BBUR224326
BBAC264462 BD3365
BAPH372461 BCC_214
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667 ARTH_0128
APER272557
ANAE240017 ANA_2420
AMAR329726 AM1_0014
AMAR234826 AM474
ALAI441768 ACL_0817
AFUL224325
ACEL351607
ABUT367737
AAUR290340 AAUR_0090


Organism features enriched in list (features available for 187 out of the 200 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00001391392
Arrangment:Pairs 1.107e-714112
Arrangment:Singles 0.0018129107286
Disease:Pharyngitis 0.000101088
Disease:bronchitis_and_pneumonitis 0.000101088
Endospores:No 4.365e-13107211
Endospores:Yes 0.0006801753
GC_Content_Range4:0-40 0.004897181213
GC_Content_Range4:40-60 0.004614859224
GC_Content_Range7:0-30 0.00003452847
GC_Content_Range7:50-60 0.002878623107
GC_Content_Range7:70-100 0.0054319811
Genome_Size_Range5:0-2 1.689e-1793155
Genome_Size_Range5:4-6 1.354e-1027184
Genome_Size_Range9:0-1 7.928e-82227
Genome_Size_Range9:1-2 2.815e-1071128
Genome_Size_Range9:4-5 0.00011761696
Genome_Size_Range9:5-6 3.774e-61188
Genome_Size_Range9:6-8 0.0040243538
Gram_Stain:Gram_Neg 7.394e-780333
Habitat:Aquatic 0.00172794191
Habitat:Host-associated 0.009581277206
Habitat:Multiple 3.980e-830178
Habitat:Specialized 0.00053462853
Motility:No 0.000084067151
Motility:Yes 0.001452970267
Optimal_temp.:30-37 0.0074091118
Optimal_temp.:37 0.004014745106
Oxygen_Req:Anaerobic 0.005532443102
Oxygen_Req:Facultative 1.018e-1228201
Oxygen_Req:Microaerophilic 0.00189231218
Salinity:Extreme_halophilic 0.004950967
Shape:Irregular_coccus 1.742e-61517
Shape:Oval 0.003272855
Shape:Rod 1.020e-1567347
Shape:Sphere 2.014e-71719
Shape:Spiral 5.057e-112934
Temp._range:Hyperthermophilic 0.00002821723
Temp._range:Mesophilic 0.0050065141473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5386 (methylglyoxal degradation I)3052440.4672
PWY0-381 (glycerol degradation I)4172980.4338
SERDEG-PWY (L-serine degradation)3492630.4328
PWY-5686 (uridine-5'-phosphate biosynthesis)5263440.4253
PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)5193400.4130
HOMOSER-METSYN-PWY (methionine biosynthesis I)4192950.4064
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181820.4016



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12098   EG11118   EG10548   
G65170.9987670.9986580.998601
EG120980.9996060.999536
EG111180.998989
EG10548



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PAIRWISE BLAST SCORES:

  G6517   EG12098   EG11118   EG10548   
G65170.0f0---
EG12098-0.0f0--
EG11118--0.0f0-
EG10548---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6517 (centered at G6517)
EG12098 (centered at EG12098)
EG11118 (centered at EG11118)
EG10548 (centered at EG10548)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6517   EG12098   EG11118   EG10548   
309/623412/623383/623388/623
AAEO224324:0:Tyes-0-58
AAUR290340:2:Tyes0---
AAVE397945:0:Tyes0129310513293
ABAC204669:0:Tyes-1499-0
ABAU360910:0:Tyes0289180482
ABOR393595:0:Tyes1559166130
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ZMOB264203:0:Tyes-436-0



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