CANDIDATE ID: 993

CANDIDATE ID: 993

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9918817e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10467 (hupB) (b0440)
   Products of gene:
     - EG10467-MONOMER (transcriptional dual regulator HU-β, NS1 (HU-1))
     - CPLX0-2021 (HU transcriptional dual regulator)
       Regulatees:
        TU0-4444 (seqA-pgm)
        TU00093 (mtr)
        TU00088 (tyrP)
        TU0-2644 (micF)
        TU00026 (galETKM)
        TU00025 (galETKM)

- EG10466 (hupA) (b4000)
   Products of gene:
     - EG10466-MONOMER (transcriptional dual regulator HU-α (HU-2))
     - CPLX0-2021 (HU transcriptional dual regulator)
       Regulatees:
        TU0-4444 (seqA-pgm)
        TU00093 (mtr)
        TU00088 (tyrP)
        TU0-2644 (micF)
        TU00026 (galETKM)
        TU00025 (galETKM)

- EG10441 (ihfB) (b0912)
   Products of gene:
     - PD00348 (integration host factor (IHF), β subunit)
     - PC00027 (IHF transcriptional dual regulator)
       Regulatees:
        TU00392 (csgDEFG)
        TU0-13666 (glmY)
        TU0-1198 (uspB)
        TU00431 (uspA)
        TU00410 (fimB)
        TU00114 (atoDAEB)
        TU0-6401 (folA)
        TU0-8761 (dcuD)
        TU00284 (hipBA)
        TU0-1122 (dmsABC)
        TU0-1681 (sodB)
        TU0-2042 (gcd)
        TU0-2041 (hpt)
        TU00326 (pspABCDE)
        TU0-2742 (hemF)
        TU0-2741 (amiA-hemF)
        TU0-2621 (sufABCDSE)
        TU0-3341 (ygjG)
        TU0-3901 (sra)
        TU0-3723 (acs-yjcHG)
        TU0-3721 (acs-yjcHG)
        TU0-4441 (norVW)
        TU0-5001 (ibpB)
        TU0-5163 (ulaG)
        TU0-5162 (ulaABCDEF)
        TU0-5741 (pspG)
        TU00369 (ubiCA)
        TU0-1962 (glcDEFGBA)
        TU861 (yeiL)
        TU0-6629 (ssuEADCB)
        TU00199 (nrfABCDEFG)
        TU0-14693 (pstSCA)
        TU0-14692 (pstS)
        TU00202 (pstSCAB-phoU)
        TU00110 (carAB)
        TU00106 (gltA)
        TU00103 (sucABCD)
        TU0-4201 (hemA-prfA-prmC)
        TU00078 (cysJIH)
        TU00158 (ndh)
        TU0-8344 (hypABCDE-fhlA)
        TU00154 (hypABCDE)
        TU00153 (hycABCDEFGHI)
        TU00176 (dps)
        TU00172 (glnHPQ)
        TU00125 (tdcABCDEFG)
        TU00247 (caiTABCDE)
        TU00310 (nuoABCEFGHIJKLMN)
        TU00403 (ecpD-htrE)
        TU00263 (ecpD-htrE)
        TU00262 (dppABCDF)
        TU00136 (flhDC)
        TU00064 (sodA)
        TU00093 (mtr)
        TU00088 (tyrP)
        TU0-1981 (osmY)
        TU00235 (adiA)
        TU00477 (ompC)
        TU00404 (ecpD-htrE)
        TU00398 (osmE)
        TU00182 (gltBDF)
        TU0-2644 (micF)
        TU00377 (focA-pflB)
        TU221 (rpoH)
        TU61 (rtcBA)
        TU182 (fimAICDFGH)
        TU161 (ompR-envZ)
        TU4 (paaZ)
        TU5 (paaABCDEFGHIJK)
        TU356 (nmpC)
        TU368 (yiaJ)
        TU524 (ilvLXG_1G_2MEDA)
        TU525 (ilvLXG_1G_2MEDA)
        TU592 (yiaKLMNO-lyx-sgbHUE)
        TU00175 (ihfB)
        TU00174 (ihfA)
        TU00001 (aceBAK)
        TU00216 (glpTQ)
        TU00021 (dusB-fis)
        TU00050 (ompF)
        TU00049 (ompC)
        TU00046 (nirBDC-cysG)
        TU00045 (narK)
        TU00044 (narGHJI)
        TU0-14287 (yjbEFGH)
        TU0-14111 (yjbE)

- EG10440 (ihfA) (b1712)
   Products of gene:
     - PD00347 (integration host factor (IHF), α subunit)
     - PC00027 (IHF transcriptional dual regulator)
       Regulatees:
        TU00392 (csgDEFG)
        TU0-13666 (glmY)
        TU0-1198 (uspB)
        TU00431 (uspA)
        TU00410 (fimB)
        TU00114 (atoDAEB)
        TU0-6401 (folA)
        TU0-8761 (dcuD)
        TU00284 (hipBA)
        TU0-1122 (dmsABC)
        TU0-1681 (sodB)
        TU0-2042 (gcd)
        TU0-2041 (hpt)
        TU00326 (pspABCDE)
        TU0-2742 (hemF)
        TU0-2741 (amiA-hemF)
        TU0-2621 (sufABCDSE)
        TU0-3341 (ygjG)
        TU0-3901 (sra)
        TU0-3723 (acs-yjcHG)
        TU0-3721 (acs-yjcHG)
        TU0-4441 (norVW)
        TU0-5001 (ibpB)
        TU0-5163 (ulaG)
        TU0-5162 (ulaABCDEF)
        TU0-5741 (pspG)
        TU00369 (ubiCA)
        TU0-1962 (glcDEFGBA)
        TU861 (yeiL)
        TU0-6629 (ssuEADCB)
        TU00199 (nrfABCDEFG)
        TU0-14693 (pstSCA)
        TU0-14692 (pstS)
        TU00202 (pstSCAB-phoU)
        TU00110 (carAB)
        TU00106 (gltA)
        TU00103 (sucABCD)
        TU0-4201 (hemA-prfA-prmC)
        TU00078 (cysJIH)
        TU00158 (ndh)
        TU0-8344 (hypABCDE-fhlA)
        TU00154 (hypABCDE)
        TU00153 (hycABCDEFGHI)
        TU00176 (dps)
        TU00172 (glnHPQ)
        TU00125 (tdcABCDEFG)
        TU00247 (caiTABCDE)
        TU00310 (nuoABCEFGHIJKLMN)
        TU00403 (ecpD-htrE)
        TU00263 (ecpD-htrE)
        TU00262 (dppABCDF)
        TU00136 (flhDC)
        TU00064 (sodA)
        TU00093 (mtr)
        TU00088 (tyrP)
        TU0-1981 (osmY)
        TU00235 (adiA)
        TU00477 (ompC)
        TU00404 (ecpD-htrE)
        TU00398 (osmE)
        TU00182 (gltBDF)
        TU0-2644 (micF)
        TU00377 (focA-pflB)
        TU221 (rpoH)
        TU61 (rtcBA)
        TU182 (fimAICDFGH)
        TU161 (ompR-envZ)
        TU4 (paaZ)
        TU5 (paaABCDEFGHIJK)
        TU356 (nmpC)
        TU368 (yiaJ)
        TU524 (ilvLXG_1G_2MEDA)
        TU525 (ilvLXG_1G_2MEDA)
        TU592 (yiaKLMNO-lyx-sgbHUE)
        TU00175 (ihfB)
        TU00174 (ihfA)
        TU00001 (aceBAK)
        TU00216 (glpTQ)
        TU00021 (dusB-fis)
        TU00050 (ompF)
        TU00049 (ompC)
        TU00046 (nirBDC-cysG)
        TU00045 (narK)
        TU00044 (narGHJI)
        TU0-14287 (yjbEFGH)
        TU0-14111 (yjbE)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 263
Effective number of orgs (counting one per cluster within 468 clusters): 179

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py23
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB43
TSP1755 Thermoanaerobacter sp.3
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332233
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-34
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SALA317655 ncbi Sphingopyxis alaskensis RB22563
SACI56780 ncbi Syntrophus aciditrophicus SB3
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RFER338969 ncbi Rhodoferax ferrireducens T1184
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-13
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257453
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUT319225 ncbi Chlorobium luteolum DSM 2733
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-53
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LSAK314315 ncbi Lactobacillus sakei sakei 23K4
LREU557436 ncbi Lactobacillus reuteri DSM 200164
LPNE400673 ncbi Legionella pneumophila Corby3
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 13
LPLA220668 ncbi Lactobacillus plantarum WCFS14
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82933
LJOH257314 ncbi Lactobacillus johnsonii NCC 5334
LHEL405566 ncbi Lactobacillus helveticus DPC 45713
LGAS324831 ncbi Lactobacillus gasseri ATCC 333234
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118424
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3654
LCHO395495 ncbi Leptothrix cholodnii SP-64
LCAS321967 ncbi Lactobacillus casei ATCC 3343
LBRE387344 ncbi Lactobacillus brevis ATCC 3674
LACI272621 ncbi Lactobacillus acidophilus NCFM4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HMOD498761 ncbi Heliobacterium modesticaldum Ice13
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25943
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DRED349161 ncbi Desulfotomaculum reducens MI-14
DPSY177439 ncbi Desulfotalea psychrophila LSv543
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y513
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G203
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CTEP194439 ncbi Chlorobium tepidum TLS3
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)3
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CNOV386415 ncbi Clostridium novyi NT4
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CCHL340177 ncbi Chlorobium chlorochromatii CaD34
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT441771 ncbi Clostridium botulinum A str. Hall3
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193973
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G43
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1684
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)4
BQUI283165 ncbi Bartonella quintana Toulouse4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BHEN283166 ncbi Bartonella henselae Houston-14
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5834
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1004
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)4
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP62977 ncbi Acinetobacter sp. ADP14
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232703
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ACAU438753 ncbi Azorhizobium caulinodans ORS 5713
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  EG10467   EG10466   EG10441   EG10440   
YPSE349747 YPSIP31758_3089YPSIP31758_3846YPSIP31758_2579YPSIP31758_1718
YPSE273123 YPTB0962YPTB0297YPTB1418YPTB2335
YPES386656 YPDSF_2790YPDSF_3729YPDSF_2302YPDSF_0723
YPES377628 YPN_0936YPN_0234YPN_2584YPN_1881
YPES360102 YPA_2649YPA_3604YPA_0684YPA_1771
YPES349746 YPANGOLA_A3051YPANGOLA_A0462YPANGOLA_A1956YPANGOLA_A2619
YPES214092 YPO3154YPO3731YPO1393YPO2427
YPES187410 Y1030Y0499Y2779Y1910
YENT393305 YE3131YE0300YE1541YE1918
XORY360094 XOOORF_4318XOOORF_4318XOOORF_2493XOOORF_3483
XORY342109 XOO0935XOO0935XOO2051XOO3021
XORY291331 XOO1036XOO1036XOO2181XOO3181
XFAS405440 XFASM12_0532XFASM12_0532XFASM12_1596XFASM12_2093
XFAS183190 PD_0475PD_0475PD_1455PD_1910
XFAS160492 XF1190XF1190XF2437XF0743
XCAM487884 XCC-B100_3377XCC-B100_3377XCC-B100_1987XCC-B100_1710
XCAM316273 XCAORF_1178XCAORF_1178XCAORF_2461XCAORF_2771
XCAM314565 XC_3262XC_3262XC_1925XC_1656
XCAM190485 XCC0978XCC0978XCC2193XCC2457
XAXO190486 XAC1081XAC1081XAC2297XAC2588
XAUT78245 XAUT_3594XAUT_2219XAUT_4386
VVUL216895 VV1_0019VV1_1224VV1_2980VV1_2375
VVUL196600 VV1107VV3145VV1301VV1966
VPAR223926 VP0920VP2911VP2029VP1294
VFIS312309 VF0799VF2397VF1758VF1237
VEIS391735 VEIS_2697VEIS_2697VEIS_3125VEIS_3095
VCHO345073 VC0395_A1509VC0395_A2650VC0395_A1504VC0395_A0846
VCHO VC1919VC0273VC1914VC1222
TTUR377629 TERTU_1627TERTU_1627TERTU_1399TERTU_1461
TTEN273068 TTE2453TTE2453TTE2453
TSP1755 TETH514_0687TETH514_0687TETH514_0687
TPSE340099 TETH39_0249TETH39_0249TETH39_0249
TDEN292415 TBD_1674TBD_0007TBD_0957TBD_1013
TCRU317025 TCR_1180TCR_1180TCR_1199TCR_1661
STYP99287 STM0451STM4170STM0982STM1339
STHE292459 STH3230STH3230STH3230STH3230
SSP94122 SHEWANA3_2658SHEWANA3_2658SHEWANA3_1978SHEWANA3_1865
SSON300269 SSO_0423SSO_4173SSO_0914SSO_1446
SSED425104 SSED_1544SSED_1544SSED_2297SSED_2596
SSAP342451 SSP1273SSP1273SSP1273SSP1273
SPRO399741 SPRO_1098SPRO_0290SPRO_1710SPRO_2150
SPEA398579 SPEA_2678SPEA_2678SPEA_2074SPEA_2468
SONE211586 SO_1797SO_1797SO_2401SO_2087
SLOI323850 SHEW_2505SHEW_2505SHEW_1955SHEW_2214
SHIGELLA HUPBHUPAHIMDHIMA
SHAL458817 SHAL_2765SHAL_2765SHAL_2046SHAL_1814
SHAE279808 SH1438SH1438SH1438SH1438
SGLO343509 SG0674SG0141SG0994SG1424
SFLE373384 SFV_0414SFV_4072SFV_0913SFV_1511
SFLE198214 AAN42041.1AAN45501.1AAN42538.1AAN43109.1
SEPI176280 SE_1160SE_1160SE_1160SE_1160
SEPI176279 SERP1041SERP1041SERP1041SERP1041
SENT454169 SEHA_C0554SEHA_C4501SEHA_C1080SEHA_C1467
SENT321314 SCH_0493SCH_4051SCH_0936SCH_1358
SENT295319 SPA2271SPA4007SPA1816SPA1504
SENT220341 STY0493STY3715STY0982STY1771
SENT209261 T2409T3461T1952T1220
SDYS300267 SDY_0292SDY_3726SDY_2346SDY_1807
SDEN318161 SDEN_2492SDEN_2492SDEN_1754SDEN_1604
SDEG203122 SDE_1611SDE_1611SDE_2135SDE_1583
SBOY300268 SBO_0334SBO_4021SBO_2200SBO_1381
SBAL402882 SHEW185_1596SHEW185_1596SHEW185_2278SHEW185_1902
SBAL399599 SBAL195_1630SBAL195_1630SBAL195_2395SBAL195_1909
SAUR93062 SACOL1513SACOL1513SACOL1513SACOL1513
SAUR93061 SAOUHSC_01490SAOUHSC_01490SAOUHSC_01490SAOUHSC_01490
SAUR426430 NWMN_1382NWMN_1382NWMN_1382NWMN_1382
SAUR418127 SAHV_1461SAHV_1461SAHV_1461SAHV_1461
SAUR367830 SAUSA300_1362SAUSA300_1362SAUSA300_1362SAUSA300_1362
SAUR359787 SAURJH1_1560SAURJH1_1560SAURJH1_1560SAURJH1_1560
SAUR359786 SAURJH9_1530SAURJH9_1530SAURJH9_1530SAURJH9_1530
SAUR282459 SAS1414SAS1414SAS1414SAS1414
SAUR282458 SAR1482SAR1482SAR1482SAR1482
SAUR273036 SAB1335CSAB1335CSAB1335CSAB1335C
SAUR196620 MW1362MW1362MW1362MW1362
SAUR158879 SA1305SA1305SA1305SA1305
SAUR158878 SAV1473SAV1473SAV1473SAV1473
SALA317655 SALA_0799SALA_1496SALA_1417
SACI56780 SYN_01228SYN_03200SYN_02019
RRUB269796 RRU_A1553RRU_A0292RRU_A1668
RFER338969 RFER_2248RFER_2248RFER_1565RFER_1342
PTHE370438 PTH_0121PTH_0121PTH_0121PTH_0121
PSYR223283 PSPTO_3723PSPTO_3723PSPTO_1751PSPTO_2384
PSYR205918 PSYR_1750PSYR_1750PSYR_3641PSYR_2168
PSTU379731 PST_2064PST_2064PST_2506PST_2363
PSP56811 PSYCPRWF_1626PSYCPRWF_1626PSYCPRWF_1586PSYCPRWF_2314
PSP312153 PNUC_2026PNUC_0501PNUC_0835
PSP296591 BPRO_3065BPRO_3065BPRO_1788BPRO_2108
PPUT76869 PPUTGB1_1905PPUTGB1_1905PPUTGB1_1365PPUTGB1_3475
PPUT351746 PPUT_3466PPUT_3466PPUT_3941PPUT_3219
PPUT160488 PP_2303PP_2303PP_1773PP_2471
PPRO298386 PBPRA2634PBPRA3422PBPRA2449PBPRA2154
PPEN278197 PEPE_1077PEPE_1077PEPE_1077
PNAP365044 PNAP_1633PNAP_1633PNAP_2797PNAP_2848
PMUL272843 PM1732PM1732PM0800PM0628
PMEN399739 PMEN_2053PMEN_2053PMEN_1855PMEN_1982
PLUT319225 PLUT_1957PLUT_1724PLUT_1957
PLUM243265 PLU3866PLU0492PLU1623PLU2663
PING357804 PING_1468PING_3218PING_3012PING_1405
PHAL326442 PSHAB0462PSHAA2059PSHAA1426PSHAA1902
PFLU220664 PFL_3984PFL_3984PFL_2117
PFLU216595 PFLU3926PFLU3926PFLU1651PFLU4142
PFLU205922 PFL_3694PFL_3694PFL_4060PFL_1937
PENT384676 PSEEN1871PSEEN1871PSEEN1493PSEEN1969
PCRY335284 PCRYO_1653PCRYO_1653PCRYO_1672PCRYO_2297
PCAR338963 PCAR_1686PCAR_1686PCAR_1455PCAR_1424
PATL342610 PATL_3133PATL_3133PATL_2465PATL_2493
PARC259536 PSYC_1474PSYC_1474PSYC_1493PSYC_1994
PAER208964 PA1804PA1804PA3161PA2738
PAER208963 PA14_41210PA14_41210PA14_23340PA14_28720
OIHE221109 OB1792OB1792OB1792OB1792
OANT439375 OANT_2203OANT_2203OANT_0165OANT_2518
NOCE323261 NOC_1772NOC_1772NOC_0181NOC_1146
NMUL323848 NMUL_A2337NMUL_A2337NMUL_A2068NMUL_A0493
NMEN374833 NMCC_1111NMCC_1111NMCC_1215NMCC_0688
NMEN272831 NMC1130NMC1130NMC1239NMC0682
NMEN122587 NMA1397NMA1397NMA1516NMA0938
NMEN122586 NMB_1230NMB_1230NMB_1302NMB_0729
NGON242231 NGO0777NGO0777NGO0603NGO0305
NEUT335283 NEUT_0661NEUT_0661NEUT_0401NEUT_2325
NEUR228410 NE2207NE2207NE1961NE0952
NARO279238 SARO_1362SARO_0165SARO_2365
MTHE264732 MOTH_0085MOTH_0085MOTH_0085MOTH_0085
MSUC221988 MS0185MS0185MS1475MS1089
MSP400668 MMWYL1_1726MMWYL1_1726MMWYL1_3223MMWYL1_2591
MSP266779 MESO_1172MESO_1172MESO_3672MESO_1147
MPET420662 MPE_A1956MPE_A1956MPE_A2245MPE_A1882
MMAG342108 AMB2181AMB2023AMB4004AMB2355
MLOT266835 MSR8478MSR8478MSR3202MLR8425
MFLA265072 MFLA_0016MFLA_0016MFLA_1070MFLA_1997
MCAP243233 MCA_0532MCA_0532MCA_1411MCA_0699
MAQU351348 MAQU_1837MAQU_1837MAQU_1028MAQU_2055
LSPH444177 BSPH_1929BSPH_1929BSPH_1929BSPH_1929
LSAK314315 LSA1015LSA1015LSA1015LSA1015
LREU557436 LREU_0765LREU_0765LREU_0765LREU_0765
LPNE400673 LPC_1303LPC_3270LPC_0426
LPNE297246 LPP1826LPP1826LPP3026LPP2764
LPNE297245 LPL1822LPL1822LPL2884LPL2637
LPNE272624 LPG1858LPG2955LPG2709
LPLA220668 LP_1879LP_1879LP_1879LP_1879
LMES203120 LEUM_1290LEUM_1290LEUM_1290
LJOH257314 LJ_1092LJ_1092LJ_1092LJ_1092
LHEL405566 LHV_1063LHV_1063LHV_1063
LGAS324831 LGAS_0894LGAS_0894LGAS_0894LGAS_0894
LDEL390333 LDB1646LDB1646LDB0853LDB0853
LDEL321956 LBUL_1525LBUL_1525LBUL_0777LBUL_1525
LCHO395495 LCHO_1929LCHO_1929LCHO_0965LCHO_1751
LCAS321967 LSEI_1381LSEI_1381LSEI_1381
LBRE387344 LVIS_0779LVIS_0779LVIS_0779LVIS_0779
LACI272621 LBA0970LBA0970LBA0970LBA0970
KPNE272620 GKPORF_B4732GKPORF_B3734GKPORF_B5381GKPORF_B1302
JSP375286 MMA_1534MMA_1534MMA_2667MMA_1493
ILOI283942 IL1002IL1002IL1354IL1393
HSOM228400 HSM_0566HSM_0566HSM_1453HSM_1337
HSOM205914 HS_1538HS_1538HS_0975HS_0862
HMOD498761 HM1_0716HM1_0716HM1_0716
HINF71421 HI_0430HI_0430HI_1221HI_1313
HINF374930 CGSHIEE_00840CGSHIEE_00840CGSHIEE_03840CGSHIEE_05110
HINF281310 NTHI0554NTHI0554NTHI1947NTHI1626
HHAL349124 HHAL_0600HHAL_0600HHAL_0562HHAL_0433
HDUC233412 HD_1004HD_1004HD_1353HD_1482
HCHE349521 HCH_02163HCH_02163HCH_04977HCH_04573
HARS204773 HEAR1749HEAR1749HEAR2573HEAR1795
GURA351605 GURA_4407GURA_4407GURA_2142GURA_2622
GTHE420246 GTNG_2149GTNG_2149GTNG_2149GTNG_2149
GSUL243231 GSU_3132GSU_3132GSU_2602GSU_1521
GMET269799 GMET_0355GMET_1608GMET_0868GMET_1417
GKAU235909 GK2215GK2215GK2215GK2215
ESP42895 ENT638_0907ENT638_0213ENT638_1431ENT638_1730
ELIT314225 ELI_03695ELI_12475ELI_08610
EFER585054 EFER_2577EFER_3754EFER_1056EFER_1353
EFAE226185 EF_1550EF_1550EF_1550EF_1550
ECOO157 HUPBHUPAHIMDHIMA
ECOL83334 ECS0494ECS4923ECS0995ECS2419
ECOL585397 ECED1_0464ECED1_4707ECED1_0939ECED1_1914
ECOL585057 ECIAI39_0233ECIAI39_4390ECIAI39_2235ECIAI39_1341
ECOL585056 ECUMN_0480ECUMN_4524ECUMN_1105ECUMN_2003
ECOL585055 EC55989_0454EC55989_4485EC55989_0957EC55989_1880
ECOL585035 ECS88_0437ECS88_4461ECS88_0940ECS88_1763
ECOL585034 ECIAI1_0444ECIAI1_4215ECIAI1_0953ECIAI1_1768
ECOL481805 ECOLC_3192ECOLC_4025ECOLC_2684ECOLC_1919
ECOL469008 ECBD_3215ECBD_4032ECBD_2683ECBD_1933
ECOL439855 ECSMS35_0483ECSMS35_4448ECSMS35_2208ECSMS35_1478
ECOL413997 ECB_00392ECB_03877ECB_00916ECB_01681
ECOL409438 ECSE_0466ECSE_4288ECSE_0971ECSE_1881
ECOL364106 UTI89_C0468UTI89_C3819UTI89_C0983UTI89_C1905
ECOL362663 ECP_0501ECP_4213ECP_0923ECP_1660
ECOL331111 ECE24377A_0476ECE24377A_4543ECE24377A_1009ECE24377A_1931
ECOL316407 ECK0434:JW0430:B0440ECK3992:JW3964:B4000ECK0903:JW0895:B0912ECK1710:JW1702:B1712
ECOL199310 C0556C4957C1050C2109
ECAR218491 ECA1151ECA0238ECA2590ECA2416
DRED349161 DRED_0115DRED_0115DRED_0115DRED_0115
DPSY177439 DP2169DP0818DP1422
DNOD246195 DNO_0226DNO_0226DNO_0114DNO_1057
DHAF138119 DSY0193DSY0193DSY0193
DDES207559 DDE_2752DDE_1799DDE_2058
DARO159087 DARO_1715DARO_1715DARO_1281DARO_2671
CVIO243365 CV_2554CV_2554CV_3045CV_1354
CVES412965 COSY_0604COSY_0546COSY_0589
CTEP194439 CT_0160CT_0295CT_0160
CSAL290398 CSAL_2043CSAL_2043CSAL_2152CSAL_1805
CRUT413404 RMAG_0380RMAG_0380RMAG_0641
CPSY167879 CPS_3781CPS_1873CPS_2336CPS_2994
CNOV386415 NT01CX_1025NT01CX_1025NT01CX_1025NT01CX_1025
CJAP155077 CJA_2003CJA_2003CJA_2113CJA_2524
CHYD246194 CHY_0205CHY_0205CHY_0205CHY_0205
CDES477974 DAUD_0075DAUD_0075DAUD_0075DAUD_0075
CCHL340177 CAG_0362CAG_0362CAG_0362CAG_0362
CBUR434922 COXBU7E912_0508COXBU7E912_0508COXBU7E912_0262COXBU7E912_1409
CBUR360115 COXBURSA331_A1641COXBURSA331_A1641COXBURSA331_A1931COXBURSA331_A1472
CBUR227377 CBU_1464CBU_1464CBU_1738CBU_1320
CBOT536232 CLM_4026CLM_4026CLM_4026
CBOT441771 CLC_3512CLC_3512CLC_3512
CBOT441770 CLB_3615CLB_3615CLB_3615
BWEI315730 BCERKBAB4_1434BCERKBAB4_1434BCERKBAB4_3494BCERKBAB4_1434
BVIE269482 BCEP1808_5520BCEP1808_0969BCEP1808_1445
BTRI382640 BT_0879BT_0879BT_0014BT_1308
BTHU412694 BALH_1364BALH_1364BALH_3354BALH_1364
BTHU281309 BT9727_1392BT9727_1392BT9727_3473BT9727_1392
BSUI470137 BSUIS_A1155BSUIS_A1155BSUIS_A0154BSUIS_A0812
BSUI204722 BR_1105BR_1105BR_0153BR_0778
BSUB BSU22790BSU22790BSU22790BSU22790
BSP107806 BU032BU032BU308BU131
BQUI283165 BQ05070BQ05070BQ00130BQ05490
BPUM315750 BPUM_2010BPUM_2010BPUM_2010BPUM_2010
BPET94624 BPET2703BPET2703BPET1891BPET2639
BPER257313 BP3530BP3530BP0951BP2572
BPAR257311 BPP2534BPP2534BPP3127BPP2600
BOVI236 GBOORF1106GBOORF1106GBOORF0158GBOORF0803
BMEL359391 BAB1_1129BAB1_1129BAB1_0152BAB1_0799
BMEL224914 BMEI0877BMEI0877BMEI1794BMEI1179
BLIC279010 BL02787BL02787BL02787BL02787
BHEN283166 BH05910BH05910BH00140BH07640
BHAL272558 BH3356BH1309BH1309BH1309
BCLA66692 ABC2917ABC2917ABC2917ABC2917
BCER572264 BCA_1569BCA_1569BCA_3819BCA_1569
BCER405917 BCE_1637BCE_1637BCE_3756BCE_1637
BCER315749 BCER98_1233BCER98_1233BCER98_2403BCER98_1233
BCER288681 BCE33L1392BCE33L1392BCE33L3486BCE33L1392
BCER226900 BC_1510BC_1510BC_3728BC_1510
BCAN483179 BCAN_A1125BCAN_A1125BCAN_A0158BCAN_A0790
BBRO257310 BB1979BB1979BB3466BB2042
BBAC360095 BARBAKC583_0550BARBAKC583_0550BARBAKC583_1371BARBAKC583_0639
BBAC264462 BD2104BD2104BD2104BD1639
BAPH198804 BUSG033BUSG033BUSG298BUSG123
BANT592021 BAA_1600BAA_1600BAA_3882BAA_1600
BANT568206 BAMEG_3062BAMEG_3062BAMEG_0774BAMEG_3062
BANT261594 GBAA1531GBAA1531GBAA3858GBAA1531
BANT260799 BAS1420BAS1420BAS3574BAS1420
BAMY326423 RBAM_020950RBAM_020950RBAM_020950RBAM_020950
BABO262698 BRUAB1_1111BRUAB1_1111BRUAB1_0149BRUAB1_0793
ASP62977 ACIAD1408ACIAD1408ACIAD2346ACIAD3040
ASP232721 AJS_2621AJS_2621AJS_2470AJS_2394
ASAL382245 ASA_1892ASA_3644ASA_1769ASA_1959
APLE434271 APJL_0115APJL_0115APJL_0741APJL_0604
APLE416269 APL_0114APL_0114APL_0739APL_0610
AHYD196024 AHA_2014AHA_3678AHA_1810AHA_2321
AFER243159 AFE_2130AFE_2139AFE_0495
AEHR187272 MLG_2285MLG_2285MLG_0932MLG_0762
ACAU438753 AZC_1611AZC_3716AZC_2293
ABOR393595 ABO_1213ABO_1213ABO_1744ABO_1836
ABAU360910 BAV2121BAV2121BAV1355BAV2065
ABAC204669 ACID345_4704ACID345_4105ACID345_4105
AAVE397945 AAVE_1666AAVE_1666AAVE_3286AAVE_2853


Organism features enriched in list (features available for 252 out of the 263 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00012421517
Arrangment:Pairs 3.417e-772112
Disease:Bubonic_plague 0.006303266
Disease:Dysentery 0.006303266
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00008671111
Endospores:No 7.635e-959211
GC_Content_Range4:0-40 1.655e-763213
GC_Content_Range4:40-60 1.837e-14141224
GC_Content_Range4:60-100 0.001328948145
GC_Content_Range7:0-30 2.784e-6647
GC_Content_Range7:30-40 0.001728257166
GC_Content_Range7:40-50 0.002961963117
GC_Content_Range7:50-60 4.999e-1278107
Genome_Size_Range5:0-2 8.763e-2120155
Genome_Size_Range5:2-4 0.003573899197
Genome_Size_Range5:4-6 2.233e-13120184
Genome_Size_Range5:6-10 0.00961151347
Genome_Size_Range9:0-1 0.0002304327
Genome_Size_Range9:1-2 3.399e-1617128
Genome_Size_Range9:4-5 0.00009615896
Genome_Size_Range9:5-6 1.565e-86288
Gram_Stain:Gram_Neg 2.416e-8176333
Habitat:Multiple 0.009718888178
Habitat:Specialized 0.00162651353
Motility:No 2.120e-935151
Motility:Yes 0.0000511138267
Optimal_temp.:30-37 0.00223941418
Optimal_temp.:35-37 0.00001541313
Optimal_temp.:37 0.008935636106
Oxygen_Req:Anaerobic 0.000060627102
Oxygen_Req:Facultative 1.251e-10123201
Pathogenic_in:No 0.002847383226
Salinity:Non-halophilic 0.005449435106
Shape:Coccobacillus 0.00008671111
Shape:Rod 9.419e-10185347
Shape:Sphere 0.0018651219
Shape:Spiral 0.0000458434
Temp._range:Hyperthermophilic 0.0002629223
Temp._range:Psychrophilic 0.000485099



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 248
Effective number of orgs (counting one per cluster within 468 clusters): 214

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SMAR399550 ncbi Staphylothermus marinus F10
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SARE391037 ncbi Salinispora arenicola CNS-2050
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GFOR411154 ncbi Gramella forsetii KT08031
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R10
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG10467   EG10466   EG10441   EG10440   
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA1349
TTHE262724 TT_C0984
TSP28240
TROS309801
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591 TLET_1411
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN243275
TACI273075
STRO369723
STOK273063
SSP84588
SSP64471
SSP387093
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SPYO186103
SMAR399550
SERY405948
SELO269084
SCO
SAVE227882
SARE391037
SACI330779
RXYL266117
RTYP257363
RSP357808
RSP101510
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PSP117
PRUM264731
PMOB403833 PMOB_1910
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LINT363253 LI0894
LINT267671
LINT189518
LBOR355277
LBOR355276
LBIF456481
LBIF355278
KRAD266940
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HBUT415426
HAUR316274
HACI382638
GVIO251221
GFOR411154 GFO_1443
FSUC59374
FSP1855
FSP106370
FNUC190304
FNOD381764
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ECHA205920
ECAN269484
DVUL882 DVU_1864
DSP255470
DSP216389
DRAD243230
DGEO319795
DETH243164
CTRA471473
CTRA471472
CTET212717
CSUL444179
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_0157
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CCUR360105
CCON360104
CCAV227941
CBLO291272
CBLO203907
CACE272562 CAC3211
CABO218497
BXEN266265
BTUR314724
BTHE226186 BT_2830
BLON206672
BHER314723
BGAR290434
BFRA295405
BFRA272559
BBUR224326
BAFZ390236
AYEL322098
AVAR240292
AURANTIMONAS
ASP1667
APHA212042
APER272557
AORE350688
ANAE240017
AMET293826
AMAR329726
AMAR234826
ALAI441768
AFUL224325
ADEH290397 ADEH_1969
ACEL351607
ABUT367737
AAUR290340
AAEO224324


Organism features enriched in list (features available for 232 out of the 248 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.405e-61792
Arrangment:Clusters 0.0099178217
Arrangment:Filaments 0.00008841010
Arrangment:Pairs 2.692e-820112
Arrangment:Singles 0.0015890130286
Disease:None 0.00499263258
Disease:Pharyngitis 0.000584188
Disease:bronchitis_and_pneumonitis 0.000584188
Endospores:No 1.465e-10120211
Endospores:Yes 0.00652821353
GC_Content_Range4:0-40 0.0001318105213
GC_Content_Range4:40-60 0.001326173224
GC_Content_Range7:0-30 0.00003073247
GC_Content_Range7:50-60 5.713e-623107
GC_Content_Range7:60-70 0.005911342134
GC_Content_Range7:70-100 0.00003431111
Genome_Size_Range5:0-2 6.335e-22112155
Genome_Size_Range5:4-6 5.428e-1335184
Genome_Size_Range9:0-1 8.454e-72327
Genome_Size_Range9:1-2 8.969e-1589128
Genome_Size_Range9:4-5 0.00001012096
Genome_Size_Range9:5-6 5.196e-71588
Gram_Stain:Gram_Neg 3.464e-8101333
Habitat:Aquatic 0.00710224691
Habitat:Multiple 1.217e-841178
Habitat:Specialized 9.999e-63653
Motility:No 0.000726076151
Motility:Yes 0.000026883267
Optimal_temp.:25-35 0.0071103114
Optimal_temp.:30-37 0.0011301118
Optimal_temp.:37 0.005408253106
Oxygen_Req:Anaerobic 3.656e-661102
Oxygen_Req:Facultative 7.128e-1932201
Pathogenic_in:Animal 0.00910271866
Pathogenic_in:Human 0.005653072213
Shape:Irregular_coccus 1.092e-71717
Shape:Rod 7.099e-1495347
Shape:Sphere 7.176e-61719
Shape:Spiral 2.280e-82934
Temp._range:Hyperthermophilic 2.203e-72123
Temp._range:Mesophilic 7.400e-6168473
Temp._range:Thermophilic 0.00027582435



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181510.4018



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10466   EG10441   EG10440   
EG104670.9999340.9988330.999354
EG104660.9986390.999287
EG104410.999082
EG10440



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PAIRWISE BLAST SCORES:

  EG10467   EG10466   EG10441   EG10440   
EG104670.0f08.7e-20--
EG104661.3e-250.0f0--
EG10441--0.0f0-
EG10440---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PC00027 (IHF transcriptional dual regulator) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9991 0.9986 EG10441 (ihfB) PD00348 (integration host factor (IHF), β subunit)
   *in cand* 0.9994 0.9991 EG10440 (ihfA) PD00347 (integration host factor (IHF), α subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG10466 (hupA) EG10466-MONOMER (transcriptional dual regulator HU-α (HU-2))
   *in cand* 0.9995 0.9988 EG10467 (hupB) EG10467-MONOMER (transcriptional dual regulator HU-β, NS1 (HU-1))

- CPLX0-2021 (HU transcriptional dual regulator) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9988 EG10467 (hupB) EG10467-MONOMER (transcriptional dual regulator HU-β, NS1 (HU-1))
   *in cand* 0.9995 0.9986 EG10466 (hupA) EG10466-MONOMER (transcriptional dual regulator HU-α (HU-2))
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9991 EG10440 (ihfA) PD00347 (integration host factor (IHF), α subunit)
   *in cand* 0.9991 0.9986 EG10441 (ihfB) PD00348 (integration host factor (IHF), β subunit)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10467 (centered at EG10467)
EG10466 (centered at EG10466)
EG10441 (centered at EG10441)
EG10440 (centered at EG10440)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10467   EG10466   EG10441   EG10440   
299/623294/623324/623340/623
AAVE397945:0:Tyes0015931168
ABAC204669:0:Tyes611-00
ABAU360910:0:Tyes7657650708
ABOR393595:0:Tyes00541636
ACAU438753:0:Tyes-02128691
ACRY349163:8:Tyes--14510
ADEH290397:0:Tyes---0
AEHR187272:0:Tyes151115111700
AFER243159:0:Tyes1610-16190
AHYD196024:0:Tyes20017900500
APLE416269:0:Tyes00625497
APLE434271:0:Tno00594463
ASAL382245:5:Tyes12118000187
ASP232721:2:Tyes228228760
ASP62928:0:Tyes--013
ASP62977:0:Tyes008621497
ASP76114:2:Tyes--300
BABO262698:1:Tno9109100608
BAMB339670:3:Tno--0450
BAMB398577:3:Tno--0483
BAMY326423:0:Tyes0000
BANT260799:0:Tno0021380
BANT261594:2:Tno0021140
BANT568206:2:Tyes2272227202272
BANT592021:2:Tno0022650
BAPH198804:0:Tyes0026396
BAPH372461:0:Tyes--1040
BBAC264462:0:Tyes4404404400
BBAC360095:0:Tyes0075779
BBRO257310:0:Tyes00149162
BCAN483179:1:Tno9369360611
BCEN331271:2:Tno--0438
BCEN331272:3:Tyes--0432
BCER226900:1:Tyes0021650
BCER288681:0:Tno0020780
BCER315749:1:Tyes0010860
BCER405917:1:Tyes0019920
BCER572264:1:Tno0022300
BCIC186490:0:Tyes00--
BCLA66692:0:Tyes0000
BHAL272558:0:Tyes2066000
BHEN283166:0:Tyes5465460705
BJAP224911:0:Fyes--04304
BLIC279010:0:Tyes0000
BMAL243160:1:Tno--0574
BMAL320388:1:Tno--10130
BMAL320389:1:Tyes--0751
BMEL224914:1:Tno00935313
BMEL359391:1:Tno8808800590
BOVI236:1:Tyes8268260557
BPAR257311:0:Tno0054261
BPER257313:0:Tyes2336233601474
BPET94624:0:Tyes8138130748
BPSE272560:1:Tyes--5850
BPSE320372:1:Tno--10850
BPSE320373:1:Tno--11120
BPUM315750:0:Tyes0000
BQUI283165:0:Tyes4504500481
BSP107806:2:Tyes0027098
BSP36773:2:Tyes--0468
BSP376:0:Tyes--04102
BSUB:0:Tyes0000
BSUI204722:1:Tyes9219210602
BSUI470137:1:Tno9719710634
BTHA271848:1:Tno--0929
BTHE226186:0:Tyes0---
BTHU281309:1:Tno0020670
BTHU412694:1:Tno0018860
BTRI382640:1:Tyes76576501154
BVIE269482:5:Tyes-0--
BVIE269482:7:Tyes--0473
BWEI315730:4:Tyes0019860
CACE272562:1:Tyes---0
CAULO:0:Tyes--22500
CBEI290402:0:Tyes--00
CBOT36826:1:Tno--00
CBOT441770:0:Tyes0-00
CBOT441771:0:Tno0-00
CBOT441772:1:Tno--00
CBOT498213:1:Tno--00
CBOT508765:1:Tyes--00
CBOT515621:2:Tyes--00
CBOT536232:0:Tno0-00
CBUR227377:1:Tyes1381384090
CBUR360115:1:Tno1601604430
CBUR434922:2:Tno23623601094
CCHL340177:0:Tyes0000
CDES477974:0:Tyes0000
CHYD246194:0:Tyes0000
CJAP155077:0:Tyes00109517
CKLU431943:1:Tyes--0-
CNOV386415:0:Tyes0000
CPER195102:1:Tyes--00
CPER195103:0:Tno--00
CPER289380:3:Tyes--00
CPHY357809:0:Tyes00--
CPSY167879:0:Tyes184604541091
CRUT413404:0:Tyes00-248
CSAL290398:0:Tyes2422423610
CSP501479:8:Fyes--11150
CSP78:2:Tyes--02946
CTEP194439:0:Tyes0-1340
CVES412965:0:Tyes54-041
CVIO243365:0:Tyes1220122017170
DARO159087:0:Tyes43943901392
DDES207559:0:Tyes-9690264
DHAF138119:0:Tyes00-0
DNOD246195:0:Tyes1101100912
DOLE96561:0:Tyes--21980
DPSY177439:2:Tyes-13860623
DRED349161:0:Tyes0000
DSHI398580:5:Tyes--0700
DVUL882:1:Tyes--0-
ECAR218491:0:Tyes919023642191
ECOL199310:0:Tno043204861513
ECOL316407:0:Tno028394721287
ECOL331111:6:Tno039015061393
ECOL362663:0:Tno037024221153
ECOL364106:1:Tno033405151436
ECOL405955:2:Tyes03643--
ECOL409438:6:Tyes039095211437
ECOL413997:0:Tno035195321284
ECOL439855:4:Tno038311682960
ECOL469008:0:Tno125820807320
ECOL481805:0:Tno127721107600
ECOL585034:0:Tno037135151317
ECOL585035:0:Tno038844931281
ECOL585055:0:Tno039875061427
ECOL585056:2:Tno040536371531
ECOL585057:0:Tno0417020011127
ECOL585397:0:Tno041424711402
ECOL83334:0:Tno045495171967
ECOLI:0:Tno036304751306
ECOO157:0:Tno045816232011
EFAE226185:3:Tyes0000
EFER585054:1:Tyes151426870295
ELIT314225:0:Tyes0-1780998
ESP42895:1:Tyes702012361538
FPHI484022:1:Tyes00--
FRANT:0:Tno00--
FTUL351581:0:Tno00--
FTUL393011:0:Tno00--
FTUL393115:0:Tyes00--
FTUL401614:0:Tyes00--
FTUL418136:0:Tno00--
FTUL458234:0:Tno00--
GBET391165:0:Tyes--10050
GFOR411154:0:Tyes-0--
GKAU235909:1:Tyes0000
GMET269799:1:Tyes012615191068
GOXY290633:5:Tyes--190
GSUL243231:0:Tyes1605160510780
GTHE420246:1:Tyes0000
GURA351605:0:Tyes225122510481
HARS204773:0:Tyes0077245
HCHE349521:0:Tyes0027022296
HDUC233412:0:Tyes00289407
HHAL349124:0:Tyes1691691290
HINF281310:0:Tyes001246969
HINF374930:0:Tyes00524746
HINF71421:0:Tno00778864
HMOD498761:0:Tyes00-0
HNEP81032:0:Tyes--0958
HSOM205914:1:Tyes6716711140
HSOM228400:0:Tno00891777
ILOI283942:0:Tyes00367406
JSP290400:1:Tyes--18280
JSP375286:0:Tyes434311850
KPNE272620:2:Tyes3343236739750
LACI272621:0:Tyes0000
LBRE387344:2:Tyes0000
LCAS321967:1:Tyes00-0
LCHO395495:0:Tyes9799790795
LDEL321956:0:Tyes6316310631
LDEL390333:0:Tyes56556500
LGAS324831:0:Tyes0000
LHEL405566:0:Tyes000-
LINN272626:1:Tno-0-0
LINT363253:3:Tyes--0-
LJOH257314:0:Tyes0000
LLAC272622:5:Tyes00--
LLAC272623:0:Tyes00--
LMES203120:1:Tyes00-0
LMON169963:0:Tno-0-0
LMON265669:0:Tyes-0-0
LPLA220668:0:Tyes0000
LPNE272624:0:Tno0-1090849
LPNE297245:1:Fno001073822
LPNE297246:1:Fyes001208942
LPNE400673:0:Tno857-27880
LREU557436:0:Tyes0000
LSAK314315:0:Tyes0000
LSPH444177:1:Tyes0000
LWEL386043:0:Tyes-0-0
MAQU351348:2:Tyes79979901016
MCAP243233:0:Tyes00820159
MEXT419610:0:Tyes--01889
MFLA265072:0:Tyes0010511977
MLOT266835:2:Tyes4239423904194
MMAG342108:0:Tyes15801981332
MMAR394221:0:Tyes--01421
MPET420662:1:Tyes74743610
MSP266779:3:Tyes262625360
MSP400668:0:Tyes001524896
MSP409:2:Tyes--03607
MSUC221988:0:Tyes001334939
MTHE264732:0:Tyes0000
MXAN246197:0:Tyes--090
NARO279238:0:Tyes1213-02229
NEUR228410:0:Tyes1276127610230
NEUT335283:2:Tyes25725701896
NGON242231:0:Tyes4394392790
NHAM323097:2:Tyes--01461
NMEN122586:0:Tno4814815480
NMEN122587:0:Tyes4264265270
NMEN272831:0:Tno3933934800
NMEN374833:0:Tno4184185210
NMUL323848:3:Tyes1827182715610
NOCE323261:1:Tyes155415540948
NWIN323098:0:Tyes--01364
OANT439375:5:Tyes2080208002401
OCAR504832:0:Tyes--01405
OIHE221109:0:Tyes0000
PAER208963:0:Tyes143714370444
PAER208964:0:Tno001377940
PARC259536:0:Tyes0019530
PATL342610:0:Tyes679679028
PCAR338963:0:Tyes272272320
PCRY335284:1:Tyes0019644
PENT384676:0:Tyes3643640460
PFLU205922:0:Tyes1763176321340
PFLU216595:1:Tyes2186218602400
PFLU220664:0:Tyes18581858-0
PHAL326442:0:Tyes0---
PHAL326442:1:Tyes-6470485
PING357804:0:Tyes63168314920
PLUM243265:0:Fyes3430011752226
PLUT319225:0:Tyes221-0221
PMEN399739:0:Tyes2102100130
PMOB403833:0:Tyes-0--
PMUL272843:1:Tyes110411041720
PNAP365044:8:Tyes0011701221
PPEN278197:0:Tyes00-0
PPRO298386:2:Tyes47612612920
PPUT160488:0:Tno5365360704
PPUT351746:0:Tyes2502507500
PPUT76869:0:Tno56356302124
PSP296591:2:Tyes127712770320
PSP312153:0:Tyes-15450338
PSP56811:2:Tyes40400768
PSTU379731:0:Tyes00436293
PSYR205918:0:Tyes001899419
PSYR223283:2:Tyes194319430629
PTHE370438:0:Tyes0000
RDEN375451:4:Tyes--7080
RETL347834:5:Tyes--01125
REUT264198:3:Tyes--13090
REUT381666:2:Tyes--0538
RFER338969:1:Tyes9069062230
RLEG216596:6:Tyes--01229
RMET266264:2:Tyes--0443
RPAL258594:0:Tyes--02692
RPAL316055:0:Tyes--02354
RPAL316056:0:Tyes--02281
RPAL316057:0:Tyes--02518
RPAL316058:0:Tyes--02029
RPOM246200:1:Tyes--01655
RRUB269796:1:Tyes1256-01371
RSOL267608:1:Tyes--0698
RSPH272943:3:Tyes--0-
RSPH272943:4:Tyes---0
RSPH349101:1:Tno--0-
RSPH349101:2:Tno---0
RSPH349102:4:Tyes--0-
RSPH349102:5:Tyes---0
SACI56780:0:Tyes1230-0515
SAGA205921:0:Tno00--
SAGA208435:0:Tno00--
SAGA211110:0:Tyes00--
SALA317655:1:Tyes0-703624
SAUR158878:1:Tno0000
SAUR158879:1:Tno0000
SAUR196620:0:Tno0000
SAUR273036:0:Tno0000
SAUR282458:0:Tno0000
SAUR282459:0:Tno0000
SAUR359786:1:Tno0000
SAUR359787:1:Tno0000
SAUR367830:3:Tno0000
SAUR418127:0:Tyes0000
SAUR426430:0:Tno0000
SAUR93061:0:Fno0000
SAUR93062:1:Tno0000
SBAL399599:3:Tyes00783284
SBAL402882:1:Tno00697310
SBOY300268:1:Tyes034881756981
SDEG203122:0:Tyes30305620
SDEN318161:0:Tyes9099091530
SDYS300267:1:Tyes0322819481434
SENT209261:0:Tno112921476950
SENT220341:0:Tno029224331136
SENT295319:0:Tno74024093000
SENT321314:2:Tno03626457883
SENT454169:2:Tno03785502881
SEPI176279:1:Tyes0000
SEPI176280:0:Tno0000
SFLE198214:0:Tyes035655181092
SFLE373384:0:Tno034654681033
SFUM335543:0:Tyes--14100
SGLO343509:3:Tyes55008781318
SGOR29390:0:Tyes00--
SHAE279808:0:Tyes0000
SHAL458817:0:Tyes9799792530
SHIGELLA:0:Tno028665281106
SLAC55218:1:Fyes--02283
SLOI323850:0:Tyes5725720275
SMED366394:3:Tyes--0805
SMEL266834:2:Tyes--0848
SMUT210007:0:Tyes00--
SONE211586:1:Tyes00596285
SPEA398579:0:Tno6486480425
SPNE1313:0:Tyes00--
SPNE170187:0:Tyes00--
SPNE171101:0:Tno00--
SPNE487213:0:Tno00--
SPNE487214:0:Tno00--
SPNE488221:0:Tno00--
SPRO399741:1:Tyes828014531897
SPYO160490:0:Tno00--
SPYO193567:0:Tno00--
SPYO198466:0:Tno00--
SPYO286636:0:Tno00--
SPYO293653:0:Tno00--
SPYO319701:0:Tyes00--
SPYO370551:0:Tno00--
SPYO370552:0:Tno00--
SPYO370553:0:Tno00--
SPYO370554:0:Tyes00--
SRUB309807:1:Tyes--00
SSAP342451:2:Tyes0000
SSED425104:0:Tyes007941102
SSON300269:1:Tyes03558468974
SSP292414:2:Tyes--0720
SSP644076:4:Fyes--0-
SSP644076:5:Fyes---0
SSP94122:1:Tyes8158151130
SSUI391295:0:Tyes00--
SSUI391296:0:Tyes00--
STHE264199:0:Tyes00--
STHE292459:0:Tyes0000
STHE299768:0:Tno00--
STHE322159:2:Tyes00--
STYP99287:1:Tyes03687525877
SWOL335541:0:Tyes0--0
TCRU317025:0:Tyes0023492
TDEN292415:0:Tyes169709701029
TLET416591:0:Tyes---0
TPSE340099:0:Tyes00-0
TSP1755:0:Tyes00-0
TTEN273068:0:Tyes00-0
TTHE262724:1:Tyes---0
TTHE300852:2:Tyes---0
TTUR377629:0:Tyes205205054
VCHO:0:Tyes168001675991
VCHO345073:1:Tno66017376550
VEIS391735:1:Tyes00421392
VFIS312309:2:Tyes01639983441
VPAR223926:1:Tyes020681122381
VVUL196600:2:Tyes02102202869
VVUL216895:1:Tno0116828372273
XAUT78245:1:Tyes-137702177
XAXO190486:0:Tyes0012161507
XCAM190485:0:Tyes0012151479
XCAM314565:0:Tno161316132700
XCAM316273:0:Tno0012561561
XCAM487884:0:Tno169016902800
XFAS160492:2:Tno45745717040
XFAS183190:1:Tyes009591409
XFAS405440:0:Tno009801439
XORY291331:0:Tno0011542173
XORY342109:0:Tyes0011252114
XORY360094:0:Tno3531353101933
YENT393305:1:Tyes2733012081561
YPES187410:5:Tno542022901424
YPES214092:3:Tno167022410987
YPES349746:2:Tno2508014392087
YPES360102:3:Tyes1992296001104
YPES377628:2:Tno715023891677
YPES386656:2:Tno2071303215800
YPSE273123:2:Tno685011512069
YPSE349747:2:Tno135621068510
ZMOB264203:0:Tyes--6990



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