CANDIDATE ID: 999

CANDIDATE ID: 999

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9922250e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG12163 (rsmB) (b3289)
   Products of gene:
     - EG12163-MONOMER (16S rRNA m5C967 methyltransferase)
       Reactions:
        cytosine967 in 16S rRNA + S-adenosyl-L-methionine  ->  5-methylcytosine967 in 16S rRNA + S-adenosyl-L-homocysteine

- EG10997 (mnmE) (b3706)
   Products of gene:
     - EG10997-MONOMER (GTP-binding protein with a role in modification of tRNA)
     - CPLX0-7608 (GTP-binding protein with a role in modification of tRNA)
     - CPLX0-7609 (complex involved in modification of tRNA)

- EG10862 (rnpA) (b3704)
   Products of gene:
     - EG10862-MONOMER (RNase P protein component; processes tRNA, 4.5S RNA)
     - CPLX0-1382 (RNase P)
       Reactions:
        a tRNA precursor with a 5' extension  ->  an uncharged tRNA + a single-stranded RNA
         In pathways
         PWY0-1479 (tRNA processing pathway)
        a tRNA precursor with a 5' extension and a short 3' extension  ->  a single-stranded RNA + a tRNA precursor with a short 3' extension
         In pathways
         PWY0-1479 (tRNA processing pathway)

- EG10424 (gyrB) (b3699)
   Products of gene:
     - EG10424-MONOMER (DNA gyrase, subunit B)
     - CPLX0-2425 (DNA gyrase)
       Reactions:
        EC# 5.99.1.3



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 342
Effective number of orgs (counting one per cluster within 468 clusters): 229

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-23
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP28240 Thermotoga sp.3
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TPET390874 ncbi Thermotoga petrophila RKU-13
TMAR243274 ncbi Thermotoga maritima MSB83
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE322159 ncbi Streptococcus thermophilus LMD-93
STHE299768 ncbi Streptococcus thermophilus CNRZ10663
STHE264199 ncbi Streptococcus thermophilus LMG 183113
SSUI391296 ncbi Streptococcus suis 98HAH333
SSUI391295 ncbi Streptococcus suis 05ZYH333
SSP94122 ncbi Shewanella sp. ANA-34
SSP64471 ncbi Synechococcus sp. CC93113
SSP644076 Silicibacter sp. TrichCH4B3
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153053
SPYO370554 ncbi Streptococcus pyogenes MGAS107503
SPYO370552 ncbi Streptococcus pyogenes MGAS102703
SPYO370551 ncbi Streptococcus pyogenes MGAS94293
SPYO319701 ncbi Streptococcus pyogenes MGAS61803
SPYO293653 ncbi Streptococcus pyogenes MGAS50053
SPYO286636 ncbi Streptococcus pyogenes MGAS103943
SPYO198466 ncbi Streptococcus pyogenes MGAS3153
SPYO193567 ncbi Streptococcus pyogenes SSI-13
SPYO186103 ncbi Streptococcus pyogenes MGAS82323
SPYO160490 ncbi Streptococcus pyogenes M1 GAS3
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMUT210007 ncbi Streptococcus mutans UA1593
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGOR29390 Streptococcus gordonii Challis3
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB3
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SAGA211110 ncbi Streptococcus agalactiae NEM3163
SAGA208435 ncbi Streptococcus agalactiae 2603V/R3
SAGA205921 ncbi Streptococcus agalactiae A9093
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170293
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPAL316057 ncbi Rhodopseudomonas palustris BisB53
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL258594 ncbi Rhodopseudomonas palustris CGA0093
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1183
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-13
PSP296591 ncbi Polaromonas sp. JS6663
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ23
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-53
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM53
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2553
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MXAN246197 ncbi Myxococcus xanthus DK 16224
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM13
MMAR394221 ncbi Maricaulis maris MCS103
MLOT266835 ncbi Mesorhizobium loti MAFF3030993
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA13
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53344
LSAK314315 ncbi Lactobacillus sakei sakei 23K3
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LINN272626 ncbi Listeria innocua Clip112624
LCHO395495 ncbi Leptothrix cholodnii SP-63
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA3
GOXY290633 ncbi Gluconobacter oxydans 621H3
GMET269799 ncbi Geobacter metallireducens GS-153
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL401614 ncbi Francisella novicida U1123
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25943
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DSHI398580 ncbi Dinoroseobacter shibae DFL 123
DRED349161 ncbi Desulfotomaculum reducens MI-13
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DOLE96561 ncbi Desulfococcus oleovorans Hxd33
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y513
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CTET212717 ncbi Clostridium tetani E883
CSP78 Caulobacter sp.3
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE253
CPER289380 ncbi Clostridium perfringens SM1013
CPER195103 ncbi Clostridium perfringens ATCC 131243
CPER195102 ncbi Clostridium perfringens 133
CNOV386415 ncbi Clostridium novyi NT3
CMUR243161 ncbi Chlamydia muridarum Nigg3
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334063
CFEL264202 ncbi Chlamydophila felis Fe/C-563
CDIF272563 ncbi Clostridium difficile 6304
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CCHL340177 ncbi Chlorobium chlorochromatii CaD33
CCAV227941 ncbi Chlamydophila caviae GPIC3
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6573
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBOT498213 ncbi Clostridium botulinum B1 str. Okra3
CBOT441772 ncbi Clostridium botulinum F str. Langeland3
CBOT441771 ncbi Clostridium botulinum A str. Hall3
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193973
CBOT36826 Clostridium botulinum A3
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CAULO ncbi Caulobacter crescentus CB153
CACE272562 ncbi Clostridium acetobutylicum ATCC 8243
CABO218497 ncbi Chlamydophila abortus S26/33
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054763
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSUB ncbi Bacillus subtilis subtilis 1684
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)3
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23083
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145803
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BHEN283166 ncbi Bartonella henselae Houston-13
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCIC186490 Candidatus Baumannia cicadellinicola3
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-983
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5833
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)3
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)3
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-63
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9413
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS423
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AORE350688 ncbi Alkaliphilus oremlandii OhILAs3
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ACRY349163 ncbi Acidiphilium cryptum JF-53
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-13


Names of the homologs of the genes in the group in each of these orgs
  EG12163   EG10997   EG10862   EG10424   
YPSE349747 YPSIP31758_3884YPSIP31758_4158YPSIP31758_4155YPSIP31758_4150
YPSE273123 YPTB3667YPTB3949YPTB3946YPTB3940
YPES386656 YPDSF_0162YPDSF_3931YPDSF_3934YPDSF_0004
YPES377628 YPN_3829YPN_3960YPN_3957YPN_3952
YPES360102 YPA_3233YPA_4148YPA_4145YPA_4140
YPES349746 YPANGOLA_A0613YPANGOLA_A4183YPANGOLA_A4180YPANGOLA_A4174
YPES214092 YPO0240YPO4103YPO4101YPO4094
YPES187410 Y4021Y4118Y4115Y4110
YENT393305 YE3891YE4178YE4176YE4170
XORY360094 XOOORF_0698XOOORF_5262XOOORF_5265XOOORF_0004
XORY342109 XOO0548XOO4368XOO4371XOO0004
XORY291331 XOO0587XOO4634XOO4637XOO0004
XFAS405440 XFASM12_1927XFASM12_2312XFASM12_2315XFASM12_0005
XFAS183190 PD_1761PD_2119PD_2122PD_0005
XFAS160492 XF0928XF2778XF2781XF0005
XCAM487884 XCC-B100_3928XCC-B100_4464XCC-B100_4467XCC-B100_0004
XCAM316273 XCAORF_0559XCAORF_4594XCAORF_4597XCAORF_0004
XCAM314565 XC_3817XC_4328XC_4331XC_0004
XCAM190485 XCC3747XCC4238XCC4241XCC0004
XAXO190486 XAC3799XAC4370XAC4373XAC0004
VVUL216895 VV1_1046VV1_1008VV1_1005VV1_0996
VVUL196600 VV3227VV0002VV0004VV0014
VPAR223926 VP3044VP0002VP0004VP0014
VFIS312309 VF2545VF0002VF0004VF0012
VEIS391735 VEIS_2266VEIS_5011VEIS_0003
VCHO345073 VC0395_A2475VC0395_A2515VC0395_A2513VC0395_A2504
VCHO VC0044VC0003VC0006VC0015
TTUR377629 TERTU_0035TERTU_4738TERTU_4740TERTU_0005
TTEN273068 TTE1503TTE2796TTE2801TTE0010
TSP28240 TRQ2_1406TRQ2_0681TRQ2_1355
TSP1755 TETH514_1752TETH514_2409TETH514_2413TETH514_0009
TPSE340099 TETH39_1316TETH39_2290TETH39_2294TETH39_0010
TPET390874 TPET_1280TPET_0657TPET_1331
TMAR243274 TM_1512TM_0267TM_1463
TDEN292415 TBD_0016TBD_2824TBD_2826TBD_0003
TCRU317025 TCR_0191TCR_2195TCR_2198TCR_0012
SWOL335541 SWOL_1228SWOL_2572SWOL_0005
STYP99287 STM3408STM3843STM3840STM3835
STHE322159 STER_1394STER_0992STER_1790
STHE299768 STR1427STR0983STR1811
STHE264199 STU1427STU0983STU1811
SSUI391296 SSU98_0413SSU98_1467SSU98_2017
SSUI391295 SSU05_0426SSU05_1454SSU05_2015
SSP94122 SHEWANA3_0033SHEWANA3_0005SHEWANA3_0008SHEWANA3_0012
SSP64471 GSYN0731GSYN2853GSYN0101
SSP644076 SCH4B_3469SCH4B_3188SCH4B_3370
SSON300269 SSO_3429SSO_3657SSO_3654SSO_3649
SSED425104 SSED_0033SSED_0001SSED_0004SSED_0009
SSAP342451 SSP1555SSP2445SSP0005
SPYO370554 MGAS10750_SPY1446MGAS10750_SPY0942MGAS10750_SPY0202
SPYO370552 MGAS10270_SPY1453MGAS10270_SPY0907MGAS10270_SPY0207
SPYO370551 MGAS9429_SPY1332MGAS9429_SPY0908MGAS9429_SPY0208
SPYO319701 M28_SPY1378M28_SPY0768M28_SPY0201
SPYO293653 M5005_SPY1337M5005_SPY0794M5005_SPY0207
SPYO286636 M6_SPY1383M6_SPY0811M6_SPY0238
SPYO198466 SPYM3_1371SPYM3_0752SPYM3_0175
SPYO193567 SPS0491SPS0953SPS0180
SPYO186103 SPYM18_1637SPYM18_1045SPYM18_0228
SPYO160490 SPY1627SPY1071SPY0246
SPRO399741 SPRO_4513SPRO_0027SPRO_0030SPRO_0035
SPEA398579 SPEA_0029SPEA_4256SPEA_4259SPEA_0004
SONE211586 SO_0030SO_0003SO_0006SO_0011
SMUT210007 SMU_482SMU_1235SMU_336
SMEL266834 SMC04090SMC01720SMC02782
SMED366394 SMED_3191SMED_3205SMED_0080SMED_3220
SLOI323850 SHEW_3738SHEW_3865SHEW_3868SHEW_0004
SHIGELLA SUNTHDFRNPAGYRB
SHAL458817 SHAL_0025SHAL_4310SHAL_4313SHAL_0004
SHAE279808 SH1698SH2676SH2677SH0005
SGOR29390 SGO_0598SGO_1266SGO_0178
SGLO343509 SG2248SG2428SG2431SG0004
SFUM335543 SFUM_0150SFUM_2595SFUM_2689
SFLE373384 SFV_3308SFV_3806SFV_3808SFV_3813
SFLE198214 AAN44783.1AAN45201.1AAN45203.1AAN45208.1
SEPI176280 SE_0892SE_2417SE_2418SE_0004
SEPI176279 SERP0783SERP0003SERP0002SERP2549
SENT454169 SEHA_C3712SEHA_C4177SEHA_C4175SEHA_C4169
SENT321314 SCH_3344SCH_3760SCH_3758SCH_3753
SENT295319 SPA3275SPA3687SPA3684SPA3679
SENT220341 STY4389STY3937STY3939STY3943
SENT209261 T4096T3677T3679T3684
SDYS300267 SDY_3465SDY_4189SDY_4186SDY_4181
SDEN318161 SDEN_0022SDEN_3774SDEN_3777SDEN_0004
SDEG203122 SDE_0019SDE_4013SDE_4016SDE_0004
SBOY300268 SBO_3282SBO_3670SBO_3673SBO_3678
SBAL402882 SHEW185_0025SHEW185_4378SHEW185_4381SHEW185_0004
SBAL399599 SBAL195_0029SBAL195_4520SBAL195_4523SBAL195_0004
SAUR93062 SACOL1229SACOL2738SACOL2739SACOL0005
SAUR93061 SAOUHSC_01184SAOUHSC_03053SAOUHSC_03054SAOUHSC_00005
SAUR426430 NWMN_1127NWMN_2612NWMN_2613NWMN_0004
SAUR418127 SAHV_1207SAHV_2696SAHV_2697SAHV_0005
SAUR367830 SAUSA300_1110SAUSA300_2646SAUSA300_2647SAUSA300_0005
SAUR359787 SAURJH1_1301SAURJH1_2791SAURJH1_2792SAURJH1_0005
SAUR359786 SAURJH9_1276SAURJH9_2734SAURJH9_2735SAURJH9_0005
SAUR282459 SAS1151SAS2594SAS2595SAS0005
SAUR282458 SAR1193SAR2798SAR2799SAR0005
SAUR273036 SAB1081SAB2588CSAB2589CSAB0005
SAUR196620 MW1100MW2630MW2631MW0005
SAUR158879 SA1060SA2501SA2502SA0005
SAUR158878 SAV1217SAV2712SAV2713SAV0005
SAGA211110 GBS0305GBS0893GBS0443
SAGA208435 SAG_0317SAG_0876SAG_0408
SAGA205921 SAK_0387SAK_0999SAK_0481
SACI56780 SYN_02708SYN_01016SYN_01012SYN_02049
RSPH349101 RSPH17029_2765RSPH17029_2891RSPH17029_0015
RSOL267608 RSC0075RSC0005RSC0002RSC3440
RRUB269796 RRU_A3660RRU_A3624RRU_A0004
RPAL316057 RPD_0717RPD_0429RPD_0004
RPAL316056 RPC_0025RPC_0291RPC_0005
RPAL258594 RPA0030RPA0295RPA0004
RMET266264 RMET_3562RMET_3610RMET_3615RMET_0003
RLEG216596 RL4724RL4739RL0454RL0012
RFER338969 RFER_3590RFER_4241RFER_0003
REUT381666 H16_A3697H16_A0103H16_A3746H16_A0003
REUT264198 REUT_A3405REUT_A3456REUT_A3462REUT_A0003
RETL347834 RHE_CH04109RHE_CH04123RHE_CH00438RHE_CH00012
RDEN375451 RD1_0653RD1_0433RD1_0212
PTHE370438 PTH_1788PTH_2917PTH_2920PTH_0005
PSYR223283 PSPTO_0179PSPTO_5611PSPTO_5614PSPTO_0004
PSYR205918 PSYR_0017PSYR_5133PSYR_5136PSYR_0004
PSTU379731 PST_0019PST_4210PST_4213PST_0004
PSP56811 PSYCPRWF_2382PSYCPRWF_2387PSYCPRWF_2390PSYCPRWF_0005
PSP312153 PNUC_2077PNUC_2084PNUC_0003
PSP296591 BPRO_4436BPRO_4904BPRO_0003
PPUT76869 PPUTGB1_0082PPUTGB1_5443PPUTGB1_0001PPUTGB1_0006
PPUT351746 PPUT_0082PPUT_5308PPUT_5311PPUT_0004
PPUT160488 PP_0066PP_0005PP_0008PP_0013
PPRO298386 PBPRA3581PBPRA0002PBPRA0004PBPRA0011
PNAP365044 PNAP_3632PNAP_4112PNAP_4119
PMUL272843 PM1561PM1166PM1163PM1476
PMEN399739 PMEN_0053PMEN_4619PMEN_4622PMEN_0004
PLUM243265 PLU4697PLU4905PLU4908PLU0004
PING357804 PING_0080PING_3612PING_3609PING_3717
PHAL326442 PSHAA0021PSHAA3021PSHAA3025PSHAA0004
PFLU220664 PFL_0020PFL_6229PFL_0004
PFLU216595 PFLU0016PFLU6133PFLU6135PFLU0004
PFLU205922 PFL_0015PFL_5742PFL_5745PFL_0004
PENT384676 PSEEN0023PSEEN5555PSEEN5558PSEEN0004
PCRY335284 PCRYO_2466PCRYO_2472PCRYO_0001PCRYO_0006
PCAR338963 PCAR_0241PCAR_3142PCAR_3145PCAR_0004
PATL342610 PATL_0021PATL_4310PATL_4314PATL_0004
PARC259536 PSYC_2138PSYC_2143PSYC_2146PSYC_0004
PAER208964 PA0017PA5567PA5569PA0004
PAER208963 PA14_00180PA14_73400PA14_73420PA14_00050
OIHE221109 OB1507OB3491OB3495OB0006
OCAR504832 OCAR_4335OCAR_4372OCAR_4532
OANT439375 OANT_1089OANT_0858OANT_0139
NWIN323098 NWI_0156NWI_3075NWI_0004
NOCE323261 NOC_3016NOC_3086NOC_3088NOC_0019
NMUL323848 NMUL_A0392NMUL_A2775NMUL_A2778NMUL_A0003
NMEN374833 NMCC_2036NMCC_0220NMCC_0315NMCC_1933
NMEN272831 NMC0104NMC1962NMC0318NMC0204
NMEN122587 NMA0162NMA0454NMA0550NMA0056
NMEN122586 NMB_0112NMB_1987NMB_1905NMB_0212
NGON242231 NGO1869NGO2107NGO2181NGO1772
NEUT335283 NEUT_0390NEUT_2155NEUT_2152NEUT_0003
NEUR228410 NE1972NE0386NE0389NE0003
NARO279238 SARO_3096SARO_0137SARO_3310
MXAN246197 MXAN_1401MXAN_7506MXAN_7511MXAN_0264
MTHE264732 MOTH_0900MOTH_2519MOTH_0007
MSUC221988 MS2203MS0480MS0483MS2249
MSP400668 MMWYL1_0015MMWYL1_4484MMWYL1_4486MMWYL1_0004
MSP266779 MESO_3418MESO_3472MESO_0375MESO_3603
MPET420662 MPE_A0272MPE_A3824MPE_A0003
MMAR394221 MMAR10_2924MMAR10_2964MMAR10_0014
MLOT266835 MLR4098MLL4483MLL5188
MFLA265072 MFLA_0184MFLA_2757MFLA_2760MFLA_0003
MEXT419610 MEXT_0551MEXT_1580MEXT_2577
MCAP243233 MCA_2845MCA_3038MCA_3035MCA_3030
MAQU351348 MAQU_0041MAQU_3894MAQU_3897MAQU_0005
LWEL386043 LWE1841LWE2746LWE2778LWE0006
LSAK314315 LSA0690LSA1880LSA1885
LPNE400673 LPC_0549LPC_3317LPC_3319LPC_0004
LPNE297246 LPP2646LPP3073LPP3076LPP0004
LPNE297245 LPL2516LPL2929LPL2932LPL0004
LPNE272624 LPG2593LPG3001LPG3004LPG0004
LMON265669 LMOF2365_1850LMOF2365_2802LMOF2365_2845LMOF2365_0006
LMON169963 LMO1822LMO2811LMO2855LMO0006
LINN272626 LIN1936LIN2943LIN2987LIN0006
LCHO395495 LCHO_4003LCHO_4384LCHO_0003
KPNE272620 GKPORF_B3029GKPORF_B3459GKPORF_B3457GKPORF_B3452
JSP375286 MMA_0158MMA_3693MMA_3696MMA_0003
ILOI283942 IL0016IL2636IL2639IL0004
HSOM228400 HSM_1932HSM_2017HSM_2020HSM_1861
HSOM205914 HS_0039HS_0132HS_0135HS_1708
HINF71421 HI_0624HI_1002HI_0999HI_0567
HINF374930 CGSHIEE_09110CGSHIEE_06965CGSHIEE_06975CGSHIEE_00130
HINF281310 NTHI0723NTHI1178NTHI1173NTHI0699
HHAL349124 HHAL_2321HHAL_1231HHAL_1229HHAL_1224
HDUC233412 HD_1992HD_0039HD_0752HD_1643
HCHE349521 HCH_00028HCH_07086HCH_10034HCH_00008
HARS204773 HEAR0133HEAR3468HEAR3471HEAR0005
GURA351605 GURA_0193GURA_4428GURA_4431GURA_0004
GTHE420246 GTNG_1026GTNG_3440GTNG_3443GTNG_0005
GSUL243231 GSU_3373GSU_3465GSU_0003
GOXY290633 GOX1597GOX1066GOX0004
GMET269799 GMET_0066GMET_3560GMET_0004
GKAU235909 GK1173GK3494GK3497GK0005
GBET391165 GBCGDNIH1_1754GBCGDNIH1_0012GBCGDNIH1_0321
FTUL418136 FTW_0506FTW_0557FTW_1555
FTUL401614 FTN_1347FTN_1298FTN_0600
FTUL393115 FTF1383FTF1283FTF0510
FRANT SUNTRMEGYRB
FPHI484022 FPHI_1340FPHI_1382FPHI_0241
ESP42895 ENT638_3720ENT638_4148ENT638_4151ENT638_0004
ELIT314225 ELI_11295ELI_13050ELI_11730
EFER585054 EFER_3272EFER_4003EFER_4000EFER_3994
EFAE226185 EF_3122EF_3312EF_3332EF_0005
ECOO157 SUNTHDFRNPAGYRB
ECOL83334 ECS4154ECS4641ECS4639ECS4634
ECOL585397 ECED1_3952ECED1_4398ECED1_4395ECED1_4390
ECOL585057 ECIAI39_3783ECIAI39_4311ECIAI39_4308ECIAI39_4303
ECOL585056 ECUMN_3762ECUMN_4238ECUMN_4235ECUMN_4230
ECOL585055 EC55989_3705EC55989_4177EC55989_4174EC55989_4168
ECOL585035 ECS88_3676ECS88_4130ECS88_4127ECS88_4122
ECOL585034 ECIAI1_3438ECIAI1_3886ECIAI1_3883ECIAI1_3877
ECOL481805 ECOLC_0425ECOLC_4288ECOLC_4291ECOLC_0004
ECOL469008 ECBD_0463ECBD_4326ECBD_4329ECBD_0004
ECOL439855 ECSMS35_3584ECSMS35_4073ECSMS35_4071ECSMS35_4064
ECOL413997 ECB_03139ECB_03590ECB_03587ECB_03582
ECOL409438 ECSE_3563ECSE_3992ECSE_3990ECSE_3985
ECOL405955 APECO1_3158APECO1_2753APECO1_27542APECO1_2758
ECOL364106 UTI89_C3733UTI89_C4259UTI89_C4255UTI89_C4249
ECOL362663 ECP_3376ECP_3907ECP_3905ECP_3900
ECOL331111 ECE24377A_3771ECE24377A_4216ECE24377A_4214ECE24377A_4209
ECOL316407 ECK3275:JW3250:B3289ECK3699:JW3684:B3706ECK3696:JW3681:B3704ECK3691:JW5625:B3699
ECOL199310 C4049C4630C4628C4621
ECAR218491 ECA4001ECA4446ECA4444ECA4438
DSHI398580 DSHI_3033DSHI_3454DSHI_3355
DRED349161 DRED_1707DRED_3324DRED_0006
DPSY177439 DP0124DP0857DP0854DP0649
DOLE96561 DOLE_2231DOLE_0100DOLE_0095
DNOD246195 DNO_0158DNO_0948DNO_0951DNO_0612
DHAF138119 DSY2692DSY5055DSY0005
DARO159087 DARO_0028DARO_4200DARO_4203DARO_0003
CVIO243365 CV_4262CV_4403CV_4406CV_0003
CVES412965 COSY_0916COSY_0939COSY_0003
CTET212717 CTC_01222CTC_00098CTC_00091
CSP78 CAUL_4779CAUL_5023CAUL_0157
CSAL290398 CSAL_2869CSAL_3315CSAL_3317CSAL_0004
CRUT413404 RMAG_0209RMAG_1014RMAG_1038RMAG_0003
CPSY167879 CPS_0018CPS_5049CPS_5052CPS_0004
CPRO264201 PC0022PC1603PC1075
CPER289380 CPR_1712CPR_2669CPR_0006
CPER195103 CPF_1994CPF_2992CPF_0006
CPER195102 CPE1741CPE2655CPE0006
CNOV386415 NT01CX_2242NT01CX_0873NT01CX_0862
CMUR243161 TC_0070TC_0167TC_0462
CKLU431943 CKL_1372CKL_3921CKL_0006
CJAP155077 CJA_3580CJA_3822CJA_3825CJA_0004
CHYD246194 CHY_1481CHY_0006CHY_2705
CHUT269798 CHU_2030CHU_0097CHU_1413
CFEL264202 CF0086CF0178CF0502
CDIF272563 CD2581CD3676CD3679CD0005
CDES477974 DAUD_1591DAUD_2233DAUD_2237DAUD_0005
CCHL340177 CAG_1119CAG_0100CAG_0029
CCAV227941 CCA_00928CCA_00835CCA_00506
CBUR434922 COXBU7E912_0205COXBU7E912_0199COXBU7E912_0203COXBU7E912_0005
CBUR360115 COXBURSA331_A2118COXBURSA331_A2124COXBURSA331_A2120COXBURSA331_A0005
CBUR227377 CBU_1915CBU_1922CBU_1918CBU_0004
CBOT536232 CLM_2807CLM_4148CLM_0006
CBOT515621 CLJ_B2737CLJ_B3982CLJ_B0006
CBOT508765 CLL_A1218CLL_A3600CLL_A0006
CBOT498213 CLD_2130CLD_0831CLD_0820
CBOT441772 CLI_2568CLI_3888CLI_0006
CBOT441771 CLC_2362CLC_3642CLC_0006
CBOT441770 CLB_2380CLB_3736CLB_0006
CBOT36826 CBO2507CBO3643CBO0006
CBLO291272 BPEN_011BPEN_013BPEN_016
CBLO203907 BFL011BFL014BFL017
CBEI290402 CBEI_1148CBEI_5099CBEI_0006
CAULO CC0102CC3756CC0160
CACE272562 CAC1725CAC3734CAC0006
CABO218497 CAB897CAB804CAB493
BWEI315730 BCERKBAB4_3688BCERKBAB4_5277BCERKBAB4_5280BCERKBAB4_0005
BVIE269482 BCEP1808_3282BCEP1808_3308BCEP1808_3312BCEP1808_0003
BTRI382640 BT_2570BT_2693BT_0041
BTHU412694 BALH_3496BALH_4991BALH_4994BALH_0005
BTHU281309 BT9727_3606BT9727_5165BT9727_5168BT9727_0005
BTHA271848 BTH_I0132BTH_I3233BTH_I3237BTH_I3241
BSUI470137 BSUIS_B1292BSUIS_A1903BSUIS_A0130
BSUI204722 BR_1814BR_2062BR_0125
BSUB BSU15740BSU41020BSU41050BSU00060
BSP36773 BCEP18194_A6474BCEP18194_A6518BCEP18194_A6522BCEP18194_A3184
BSP107806 BU016BU014BU010
BPUM315750 BPUM_1473BPUM_3733BPUM_3736BPUM_0006
BPSE320373 BURPS668_0155BURPS668_0096BURPS668_0091BURPS668_0087
BPSE320372 BURPS1710B_A0374BURPS1710B_A0322BURPS1710B_A0317BURPS1710B_A0312
BPSE272560 BPSL0125BPSL0080BPSL0076BPSL0073
BPET94624 BPET4711BPET5001BPET5013BPET0003
BPER257313 BP0569BP3863BP0493BP0489
BPAR257311 BPP0259BPP4417BPP4403BPP4399
BOVI236 GBOORF1819GBOORF2058GBOORF0128
BMEL359391 BAB1_1822BAB1_2063BAB1_0122
BMEL224914 BMEI0235BMEI0006BMEI1823
BMAL320389 BMA10247_2357BMA10247_3547BMA10247_3552BMA10247_0003
BMAL320388 BMASAVP1_A2801BMASAVP1_A2842BMASAVP1_A2846BMASAVP1_A2850
BMAL243160 BMA_0146BMA_3395BMA_3399BMA_0003
BLIC279010 BL02299BL00110BL00081
BJAP224911 BLR0579BLL0634BLL0823
BHEN283166 BH15990BH16690BH00410
BHAL272558 BH2507BH4062BH4065BH0006
BCLA66692 ABC2317ABC4117ABC4120ABC0006
BCIC186490 BCI_0137BCI_0134BCI_0131
BCER572264 BCA_3965BCA_5639BCA_5642BCA_0005
BCER405917 BCE_3907BCE_5635BCE_5638BCE_0005
BCER315749 BCER98_2517BCER98_4027BCER98_0005
BCER288681 BCE33L3624BCE33L5181BCE33L5184BCE33L0005
BCER226900 BC_3863BC_5486BC_5489BC_0005
BCEN331272 BCEN2424_3123BCEN2424_3161BCEN2424_3165BCEN2424_0003
BCEN331271 BCEN_2509BCEN_2547BCEN_2551BCEN_2555
BCAN483179 BCAN_A1852BCAN_A2108BCAN_A0128
BBRO257310 BB0262BB5005BB4991BB4987
BBAC360095 BARBAKC583_0072BARBAKC583_0010BARBAKC583_1346
BAPH372461 BCC_008BCC_006BCC_002
BAPH198804 BUSG017BUSG014BUSG010
BANT592021 BAA_4027BAA_5768BAA_5771BAA_0005
BANT568206 BAMEG_0628BAMEG_5785BAMEG_5788BAMEG_0005
BANT261594 GBAA4003GBAA5734GBAA5737GBAA0005
BANT260799 BAS3716BAS5337BAS5340BAS0005
BAMY326423 RBAM_015570RBAM_038120RBAM_038150RBAM_000060
BAMB398577 BAMMC406_3061BAMMC406_3097BAMMC406_0003
BAMB339670 BAMB_3178BAMB_3213BAMB_3217BAMB_0003
BABO262698 BRUAB1_1794BRUAB1_2037BRUAB1_0122
ASP76114 EBA2833EBA2841EBB90EBA2848
ASP62977 ACIAD3638ACIAD3680ACIAD3683ACIAD0004
ASP62928 AZO3985AZO3988AZO3991AZO0003
ASP232721 AJS_3894AJS_4138AJS_4146
ASAL382245 ASA_4142ASA_4381ASA_4384ASA_0004
APLE434271 APJL_1588APJL_1515APJL_1985APJL_0828
APLE416269 APL_1560APL_1490APL_1939APL_0821
AORE350688 CLOS_1431CLOS_2872CLOS_0006
AMET293826 AMET_2782AMET_4797AMET_4801AMET_0006
AHYD196024 AHA_0256AHA_4280AHA_4283AHA_0004
AFER243159 AFE_3003AFE_2993AFE_2990AFE_3021
AEHR187272 MLG_2626MLG_2881MLG_2883MLG_0004
ACRY349163 ACRY_2654ACRY_2407ACRY_2886
ACAU438753 AZC_4698AZC_4708AZC_4054AZC_1009
ABOR393595 ABO_0129ABO_2752ABO_2754ABO_0004
ABAU360910 BAV0228BAV3419BAV3414BAV3410
ABAC204669 ACID345_4229ACID345_4729ACID345_0219ACID345_0008
AAVE397945 AAVE_4528AAVE_4791AAVE_0003


Organism features enriched in list (features available for 324 out of the 342 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.007239519
Arrangment:Chains 0.00220446392
Arrangment:Clusters 0.00362791517
Arrangment:Pairs 3.715e-989112
Arrangment:Singles 0.0091902147286
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00144651111
Endospores:No 1.742e-1081211
Endospores:Yes 0.00034364153
GC_Content_Range4:0-40 0.0012623102213
GC_Content_Range4:40-60 0.0004386143224
GC_Content_Range7:50-60 9.368e-679107
Genome_Size_Range5:0-2 1.510e-1840155
Genome_Size_Range5:4-6 9.197e-13141184
Genome_Size_Range9:0-1 0.0002657627
Genome_Size_Range9:1-2 4.356e-1434128
Genome_Size_Range9:4-5 0.00002697196
Genome_Size_Range9:5-6 2.683e-77088
Gram_Stain:Gram_Neg 1.944e-9220333
Habitat:Multiple 0.0043680112178
Habitat:Specialized 0.00005941653
Motility:No 0.000029063151
Motility:Yes 1.462e-6176267
Optimal_temp.:25-30 0.00641901619
Optimal_temp.:30-37 0.00031291718
Optimal_temp.:35-37 0.00043251313
Oxygen_Req:Anaerobic 0.000509242102
Oxygen_Req:Facultative 5.400e-9144201
Oxygen_Req:Microaerophilic 0.0030466418
Pathogenic_in:Animal 0.00006435166
Pathogenic_in:Human 0.0000596140213
Pathogenic_in:No 0.0002515106226
Shape:Coccobacillus 0.00144651111
Shape:Rod 1.485e-12234347
Shape:Sphere 0.0000423219
Shape:Spiral 5.420e-8434
Temp._range:Hyperthermophilic 0.0001321423
Temp._range:Mesophilic 0.0000517281473
Temp._range:Psychrophilic 0.004810199
Temp._range:Thermophilic 0.0000418835



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 193
Effective number of orgs (counting one per cluster within 468 clusters): 169

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX0
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F11
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SARE391037 ncbi Salinispora arenicola CNS-2050
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.11
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RCON272944 ncbi Rickettsia conorii Malish 71
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 230
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT31
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE51
NSP35761 Nocardioides sp.0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECAN269484 ncbi Ehrlichia canis Jake1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE451
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-401
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138260
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  EG12163   EG10997   EG10862   EG10424   
WSUC273121 WS0002
WPIP955 WD_0112
WPIP80849 WB_1185
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX59
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0931
TTHE262724 TT_C0562
TROS309801 TRD_0832
TPEN368408
TPAL243276
TKOD69014 TK1935
TFUS269800
TELO197221 TLR0209
TDEN243275
TACI273075
STRO369723 STROP_1870
STOK273063
SSOL273057
SMAR399550 SMAR_0376
SERY405948
SCO
SAVE227882
SARE391037
SACI330779
RTYP257363 RT0569
RSPH272943 RSP_1346
RSP101510
RSAL288705
RRIC452659 RRIOWA_1051
RRIC392021 A1G_04880
RPRO272947 RP580
RMAS416276 RMA_0917
RCON272944 RC0884
RALB246199
RAKA293614 A1C_04510
PTOR263820
PSP117 RB7431
PRUM264731
PMOB403833 PMOB_1409
PMAR93060 P9215_05051
PMAR74546 PMT9312_0425
PMAR167546 P9301ORF_0461
PMAR167542 P9515ORF_0523
PMAR167540 PMM0426
PMAR146891 A9601_04811
PISL384616
PINT246198 PIN_A0294
PHOR70601 PH0851
PFUR186497 PF0666
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844 PAB0830
NSP35761
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307 MTHE_1393
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2419
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358 MLAB_0412
MKAN190192 MK1539
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_0419
MBOV410289
MBOV233413
MBAR269797 MBAR_A2805
MAVI243243
MART243272
MAEO419665
MACE188937 MA1584
MABS561007
LXYL281090
LLAC272623 L0157
LLAC272622 LACR_2547
LHEL405566 LHV_2104
LGAS324831 LGAS_0762
LDEL390333 LDB2215
LDEL321956 LBUL_2036
LBRE387344 LVIS_0964
LBIF456481 LEPBI_I0005
LBIF355278 LBF_0008
LACI272621 LBA1976
KRAD266940
IHOS453591
HWAL362976 HQ2652A
HSP64091
HSAL478009 OE2303F
HPYL85963
HPYL357544
HPY
HMUK485914 HMUK_2729
HMAR272569 RRNAC0456
HHEP235279 HH_1127
HBUT415426 HBUT_0511
HAUR316274 HAUR_3441
HACI382638
GVIO251221 GLR2452
FSUC59374 FSU1162
FSP1855
FSP106370
FNUC190304
FMAG334413 FMG_1628
FJOH376686 FJOH_2707
FALN326424
ERUM302409 ERGA_CDS_04380
ERUM254945 ERWE_CDS_04430
ECAN269484 ECAJ_0417
DSP255470
DSP216389
DRAD243230 DR_1016
DGEO319795 DGEO_0478
DETH243164
CSUL444179
CSP501479 CSE45_3480
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0003
CJEJ360109 JJD26997_0003
CJEJ354242 CJJ81176_0029
CJEJ195099 CJE_0003
CJEJ192222 CJ0003
CJEI306537
CHOM360107 CHAB381_0004
CGLU196627 CG1802
CFET360106 CFF8240_0003
CEFF196164 CE1718
CDIP257309 DIP1321
CCUR360105 CCV52592_2054
CCON360104
BXEN266265
BTUR314724
BTHE226186
BLON206672
BHER314723
BGAR290434
BFRA295405 BF0297
BFRA272559 BF0246
BBUR224326
BBAC264462 BD0004
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667
APHA212042 APH_0716
APER272557
ANAE240017
AMAR234826 AM644
ALAI441768 ACL_1403
AFUL224325
ACEL351607
ABUT367737 ABU_0003
AAUR290340
AAEO224324 AQ_871


Organism features enriched in list (features available for 178 out of the 193 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00090861692
Arrangment:Pairs 0.000022117112
Arrangment:Singles 0.0002535106286
Endospores:No 1.015e-14106211
Endospores:Yes 0.0039148853
GC_Content_Range4:0-40 0.006243077213
GC_Content_Range4:40-60 0.000706752224
GC_Content_Range7:0-30 0.00004282747
GC_Content_Range7:50-60 0.000458319107
GC_Content_Range7:70-100 0.0005465911
Genome_Size_Range5:0-2 6.048e-1688155
Genome_Size_Range5:4-6 5.171e-1124184
Genome_Size_Range9:0-1 0.00006501827
Genome_Size_Range9:1-2 5.310e-1170128
Genome_Size_Range9:4-5 5.395e-61296
Genome_Size_Range9:5-6 0.00004791288
Gram_Stain:Gram_Neg 1.783e-1165333
Habitat:Multiple 0.002485341178
Habitat:Specialized 0.00144622653
Motility:No 0.000237463151
Motility:Yes 0.000260763267
Optimal_temp.:- 0.005630266257
Optimal_temp.:85 0.008486944
Oxygen_Req:Aerobic 0.009923067185
Oxygen_Req:Anaerobic 0.000114247102
Oxygen_Req:Facultative 1.869e-833201
Oxygen_Req:Microaerophilic 0.00117701218
Pathogenic_in:Animal 0.0001548866
Pathogenic_in:Human 0.001383050213
Shape:Branched_filament 0.008486944
Shape:Irregular_coccus 1.001e-91717
Shape:Rod 1.377e-1464347
Shape:Sphere 1.235e-61619
Shape:Spiral 6.949e-72434
Temp._range:Hyperthermophilic 1.801e-61823
Temp._range:Mesophilic 0.0032068133473
Temp._range:Thermophilic 0.00983871735



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5386 (methylglyoxal degradation I)3052420.4812
ARO-PWY (chorismate biosynthesis I)5103360.4691
GLYCOCAT-PWY (glycogen degradation I)2462030.4485
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951700.4379
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181840.4351
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002320.4346
SERDEG-PWY (L-serine degradation)3492570.4251
PWY-6164 (3-dehydroquinate biosynthesis I)5163320.4168
PWY-5918 (heme biosynthesis I)2722120.4077
P163-PWY (lysine fermentation to acetate and butyrate)3672630.4034



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10997   EG10862   EG10424   
EG121630.998650.998520.998792
EG109970.9998380.999773
EG108620.999762
EG10424



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PAIRWISE BLAST SCORES:

  EG12163   EG10997   EG10862   EG10424   
EG121630.0f0---
EG10997-0.0f0--
EG10862--0.0f0-
EG10424---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10862 EG10997 (centered at EG10997)
EG10424 (centered at EG10424)
EG12163 (centered at EG12163)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12163   EG10997   EG10862   EG10424   
396/623412/623285/623420/623
AAEO224324:0:Tyes-0--
AAVE397945:0:Tyes44444701-0
ABAC204669:0:Tyes425647672120
ABAU360910:0:Tyes0320131963192
ABOR393595:0:Tyes125279027920
ABUT367737:0:Tyes---0
ACAU438753:0:Tyes3740375030780
ACRY349163:8:Tyes2460-482
ADEH290397:0:Tyes--43930
AEHR187272:0:Tyes2603285828600
AFER243159:0:Tyes133031
AHYD196024:0:Tyes233411341160
ALAI441768:0:Tyes-0--
AMAR234826:0:Tyes---0
AMAR329726:9:Tyes38530--
AMET293826:0:Tyes2729475247560
AORE350688:0:Tyes14302939-0
APHA212042:0:Tyes---0
APLE416269:0:Tyes76968611590
APLE434271:0:Tno79670912070
ASAL382245:5:Tyes3989422142240
ASP232721:2:Tyes0248-256
ASP62928:0:Tyes4044404740500
ASP62977:0:Tyes3373341534180
ASP76114:2:Tyes03610
AVAR240292:3:Tyes24430--
BABO262698:1:Tno16061840-0
BAMB339670:3:Tno3258329432980
BAMB398577:3:Tno31033139-0
BAMY326423:0:Tyes1547380038030
BANT260799:0:Tno3765540554080
BANT261594:2:Tno3659529452970
BANT568206:2:Tyes544557055730
BANT592021:2:Tno3878556455670
BAPH198804:0:Tyes-740
BAPH372461:0:Tyes-640
BBAC264462:0:Tyes---0
BBAC360095:0:Tyes610-1248
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