CANDIDATE ID: 1003

CANDIDATE ID: 1003

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9935450e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7525 (yqgF) (b2949)
   Products of gene:
     - G7525-MONOMER (predicted Holliday junction resolvase)

- G7524 (yqgE) (b2948)
   Products of gene:
     - G7524-MONOMER (predicted protein)

- EG12366 (rsmE) (b2946)
   Products of gene:
     - EG12366-MONOMER (16S rRNA m3U1498 methyltransferase monomer)
     - CPLX0-7727 (16S rRNA m3U1498 methyltransferase)
       Reactions:
        S-adenosyl-L-methionine + uracil1498 in 16S rRNA  ->  S-adenosyl-L-homocysteine + N3-methyluracil1498 in 16S rRNA

- EG10419 (gshB) (b2947)
   Products of gene:
     - GLUTATHIONE-SYN-MONOMER (glutathione synthetase monomer)
     - GLUTATHIONE-SYN-CPLX (glutathione synthetase)
       Reactions:
        glycine + L-gamma-glutamylcysteine + ATP  ->  glutathione + phosphate + ADP + 2 H+
         In pathways
         PWY-4041 (PWY-4041)
         GLUTATHIONESYN-PWY (glutathione biosynthesis)



Back to top



ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 268
Effective number of orgs (counting one per cluster within 468 clusters): 189

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TFUS269800 ncbi Thermobifida fusca YX3
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STRO369723 ncbi Salinispora tropica CNB-4403
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B4
SSP292414 ncbi Ruegeria sp. TM10404
SSP1148 ncbi Synechocystis sp. PCC 68033
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis3
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAVE227882 ncbi Streptomyces avermitilis MA-46803
SALA317655 ncbi Sphingopyxis alaskensis RB22564
RTYP257363 ncbi Rickettsia typhi Wilmington3
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSP101510 ncbi Rhodococcus jostii RHA13
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RRIC452659 ncbi Rickettsia rickettsii Iowa3
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith3
RPRO272947 ncbi Rickettsia prowazekii Madrid E3
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RMAS416276 ncbi Rickettsia massiliae MTU53
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
RCAN293613 ncbi Rickettsia canadensis McKiel3
RBEL391896 ncbi Rickettsia bellii OSU 85-3893
RBEL336407 ncbi Rickettsia bellii RML369-C3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PSP117 Pirellula sp.4
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm703
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP35761 Nocardioides sp.3
NOCE323261 ncbi Nitrosococcus oceani ATCC 197073
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NFAR247156 ncbi Nocardia farcinica IFM 101523
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16224
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-13
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E3
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
MABS561007 ncbi Mycobacterium abscessus ATCC 199773
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LCHO395495 ncbi Leptothrix cholodnii SP-64
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23363
HSOM205914 ncbi Haemophilus somnus 129PT3
HNEP81032 Hyphomonas neptunium4
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP3
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GOXY290633 ncbi Gluconobacter oxydans 621H3
GFOR411154 ncbi Gramella forsetii KT08033
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FSP1855 Frankia sp. EAN1pec3
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25943
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DNOD246195 ncbi Dichelobacter nodosus VCS1703A3
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CTEP194439 ncbi Chlorobium tepidum TLS3
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CJAP155077 Cellvibrio japonicus4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)3
BQUI283165 ncbi Bartonella quintana Toulouse4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-14
BCIC186490 Candidatus Baumannia cicadellinicola3
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5833
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)3
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL033
APLE416269 ncbi Actinobacillus pleuropneumoniae L203
AMAR329726 ncbi Acaryochloris marina MBIC110173
AMAR234826 ncbi Anaplasma marginale St. Maries3
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3
ACRY349163 ncbi Acidiphilium cryptum JF-53
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  G7525   G7524   EG12366   EG10419   
ZMOB264203 ZMO0785ZMO0349ZMO1554ZMO1913
YPSE349747 YPSIP31758_0834YPSIP31758_0835YPSIP31758_0837YPSIP31758_0836
YPSE273123 YPTB3209YPTB3208YPTB3206YPTB3207
YPES386656 YPDSF_0578YPDSF_0579YPDSF_0581YPDSF_0580
YPES377628 YPN_3134YPN_3133YPN_3131YPN_3132
YPES360102 YPA_0328YPA_0329YPA_0331YPA_0330
YPES349746 YPANGOLA_A3340YPANGOLA_A3341YPANGOLA_A3343YPANGOLA_A3342
YPES214092 YPO0937YPO0936YPO0934YPO0935
YPES187410 Y3323Y3322Y3320Y3321
YENT393305 YE3429YE3428YE3426YE3427
XORY360094 XOOORF_3885XOOORF_3886XOOORF_3218XOOORF_3263
XORY342109 XOO1310XOO1309XOO1689XOO1646
XORY291331 XOO1426XOO1425XOO1786XOO1745
XFAS405440 XFASM12_1427XFASM12_1428XFASM12_0162XFASM12_1016
XFAS183190 PD_1275PD_1276PD_0156PD_0844
XFAS160492 XF2227XF2228XF0190XF1956
XCAM487884 XCC-B100_1414XCC-B100_1413XCC-B100_1268XCC-B100_1228
XCAM316273 XCAORF_3112XCAORF_3113XCAORF_3264XCAORF_3293
XCAM314565 XC_1366XC_1365XC_1224XC_1182
XCAM190485 XCC2747XCC2748XCC2885XCC2926
XAXO190486 XAC2917XAC2918XAC3069XAC3103
XAUT78245 XAUT_3922XAUT_2594XAUT_4104XAUT_0338
VVUL216895 VV1_1528VV1_1529VV1_1531VV1_1530
VVUL196600 VV2870VV2869VV2867VV2868
VPAR223926 VP2613VP2612VP2610VP2611
VFIS312309 VF0433VF0434VF0436VF0435
VEIS391735 VEIS_1516VEIS_1517VEIS_4814VEIS_0926
VCHO345073 VC0395_A0018VC0395_A0019VC0395_A0021VC0395_A0020
VCHO VC0466VC0467VC0469VC0468
TTUR377629 TERTU_0227TERTU_0228TERTU_3979TERTU_0230
TFUS269800 TFU_2069TFU_2389TFU_0840
TDEN292415 TBD_2580TBD_2579TBD_0155TBD_2409
TCRU317025 TCR_1828TCR_1827TCR_1823TCR_1825
STYP99287 STM3097STM3096STM3094STM3095
STRO369723 STROP_1829STROP_0987STROP_3454
SSP94122 SHEWANA3_1199SHEWANA3_1200SHEWANA3_3444SHEWANA3_3445
SSP644076 SCH4B_4422SCH4B_0362SCH4B_0350SCH4B_1295
SSP292414 TM1040_0967TM1040_3069TM1040_3079TM1040_0450
SSP1148 SLL1547SLR0722SLR1238
SSON300269 SSO_3103SSO_3102SSO_3100SSO_3101
SSED425104 SSED_1236SSED_1237SSED_3972SSED_3973
SPRO399741 SPRO_4028SPRO_4027SPRO_4025SPRO_4026
SPEA398579 SPEA_1131SPEA_1132SPEA_0600SPEA_0599
SONE211586 SO_3347SO_3346SO_0832SO_0831
SMEL266834 SMC01355SMC00019SMC00826SMC00419
SMED366394 SMED_0941SMED_0532SMED_0388SMED_3546
SLOI323850 SHEW_1143SHEW_1144SHEW_3224SHEW_3225
SLAC55218 SL1157_2422SL1157_0696SL1157_0585
SHIGELLA YQGFYQGEYGGJGSHB
SHAL458817 SHAL_1176SHAL_1177SHAL_0701SHAL_0700
SGLO343509 SG2024SG2023SG2021SG2022
SFLE373384 SFV_3003SFV_3002SFV_3000SFV_3001
SFLE198214 AAN44421.1AAN44420.1AAN44418.1AAN44419.1
SENT454169 SEHA_C3336SEHA_C3335SEHA_C3333SEHA_C3334
SENT321314 SCH_3037SCH_3036SCH_3034SCH_3035
SENT295319 SPA2960SPA2959SPA2957SPA2958
SENT220341 STY3250STY3249STY3247STY3248
SENT209261 T3009T3008T3006T3007
SDYS300267 SDY_3123SDY_3124SDY_3126SDY_3125
SDEN318161 SDEN_2673SDEN_2674SDEN_2974SDEN_2975
SDEG203122 SDE_3638SDE_3637SDE_0467SDE_3635
SBOY300268 SBO_3041SBO_3042SBO_3044SBO_3043
SBAL402882 SHEW185_3035SHEW185_3034SHEW185_0809SHEW185_0808
SBAL399599 SBAL195_3178SBAL195_3177SBAL195_0841SBAL195_0840
SAVE227882 SAV6851SAV5129SAV5572
SALA317655 SALA_0925SALA_0165SALA_2275SALA_0261
RTYP257363 RT0321RT0098RT0159
RSPH349102 RSPH17025_1879RSPH17025_0226RSPH17025_0216RSPH17025_0473
RSPH349101 RSPH17029_1342RSPH17029_2659RSPH17029_2667RSPH17029_0462
RSPH272943 RSP_2684RSP_0999RSP_1007RSP_1815
RSP101510 RHA1_RO07136RHA1_RO03630RHA1_RO01245
RSOL267608 RSC0676RSC0675RSC2763RSC0345
RRUB269796 RRU_A3178RRU_A3059RRU_A0571RRU_A3690
RRIC452659 RRIOWA_0544RRIOWA_0061RRIOWA_0258
RRIC392021 A1G_02575A1G_00270A1G_01190
RPRO272947 RP330RP032RP168
RPOM246200 SPO_2350SPO_0296SPO_3629SPO_0401
RPAL316058 RPB_2429RPB_4502RPB_1847RPB_0419
RPAL316057 RPD_3023RPD_4348RPD_4116RPD_0401
RPAL316056 RPC_2255RPC_0788RPC_4716RPC_0319
RPAL316055 RPE_3368RPE_0714RPE_0873RPE_0359
RPAL258594 RPA3113RPA0913RPA1151RPA0322
RMET266264 RMET_2742RMET_2743RMET_2983RMET_0243
RMAS416276 RMA_0471RMA_0049RMA_0218
RLEG216596 RL2073RL1035RL0856RL0338
RFER338969 RFER_1378RFER_1377RFER_0207RFER_0765
REUT381666 H16_A2915H16_A2916H16_A3149H16_A0323
REUT264198 REUT_A0706REUT_A0705REUT_A2843REUT_A0294
RETL347834 RHE_CH01852RHE_CH00966RHE_CH00804RHE_CH00322
RDEN375451 RD1_1766RD1_3419RD1_1192
RCAN293613 A1E_03830A1E_00140A1E_01000
RBEL391896 A1I_05165A1I_00140A1I_01600
RBEL336407 RBE_0807RBE_0027RBE_1141
PSYR223283 PSPTO_5038PSPTO_5037PSPTO_5076PSPTO_5035
PSYR205918 PSYR_0484PSYR_0485PSYR_0453PSYR_0487
PSTU379731 PST_3957PST_3956PST_3945PST_3954
PSP56811 PSYCPRWF_0143PSYCPRWF_0144PSYCPRWF_0913PSYCPRWF_0522
PSP312153 PNUC_0244PNUC_0243PNUC_0226PNUC_1954
PSP296591 BPRO_1143BPRO_1142BPRO_4865BPRO_4540
PSP117 RB8076RB5675RB10359RB6756
PPUT76869 PPUTGB1_5046PPUTGB1_5045PPUTGB1_5035PPUTGB1_5043
PPUT351746 PPUT_4870PPUT_4869PPUT_4859PPUT_4867
PPUT160488 PP_4996PP_4995PP_4985PP_4993
PPRO298386 PBPRA3140PBPRA3139PBPRA3137PBPRA3138
PNAP365044 PNAP_3347PNAP_3348PNAP_4078PNAP_3736
PMUL272843 PM1870PM1869PM1868
PMEN399739 PMEN_0399PMEN_0400PMEN_0412PMEN_0402
PLUM243265 PLU1182PLU1183PLU1185PLU1184
PING357804 PING_1285PING_1286PING_1288PING_1287
PHAL326442 PSHAA2601PSHAA2600PSHAA2598PSHAA2599
PFLU220664 PFL_5831PFL_5830PFL_5805PFL_5828
PFLU216595 PFLU5756PFLU5755PFLU5728PFLU5753
PFLU205922 PFL_5312PFL_5311PFL_5288PFL_5309
PENT384676 PSEEN5059PSEEN5058PSEEN5048PSEEN5056
PCRY335284 PCRYO_0061PCRYO_0062PCRYO_1450PCRYO_2033
PATL342610 PATL_1154PATL_1153PATL_3334PATL_1152
PARC259536 PSYC_0056PSYC_0057PSYC_0966PSYC_1752
PAER208964 PA0404PA0405PA0419PA0407
PAER208963 PA14_05280PA14_05290PA14_05450PA14_05310
OCAR504832 OCAR_5793OCAR_7326OCAR_7260OCAR_4407
OANT439375 OANT_3664OANT_0595OANT_2999OANT_0783
NWIN323098 NWI_2004NWI_2752NWI_2564NWI_0117
NSP35761 NOCA_2408NOCA_1289NOCA_1905
NOCE323261 NOC_0367NOC_0368NOC_0123
NMUL323848 NMUL_A2479NMUL_A2478NMUL_A0379NMUL_A0217
NMEN374833 NMCC_1250NMCC_1249NMCC_0293NMCC_1461
NMEN272831 NMC1275NMC1274NMC1899NMC1477
NMEN122587 NMA1551NMA1550NMA0528NMA1747
NMEN122586 NMB_1337NMB_1336NMB_1925NMB_1559
NHAM323097 NHAM_2279NHAM_3550NHAM_3186NHAM_0145
NGON242231 NGO0568NGO0569NGO2160NGO1217
NFAR247156 NFA36430NFA55110NFA14270
NEUT335283 NEUT_0449NEUT_0448NEUT_1049NEUT_0953
NEUR228410 NE1667NE1668NE0779NE1295
NARO279238 SARO_0906SARO_0683SARO_0950SARO_2081
MXAN246197 MXAN_5823MXAN_2022MXAN_1133MXAN_0017
MVAN350058 MVAN_2641MVAN_6057MVAN_3835
MSUC221988 MS0261MS0260MS0238
MSP409 M446_4344M446_6268M446_2244M446_1113
MSP400668 MMWYL1_0540MMWYL1_0539MMWYL1_4321MMWYL1_4323
MSP266779 MESO_1361MESO_0753MESO_0372MESO_3585
MPET420662 MPE_A0706MPE_A0705MPE_A0200MPE_A0180
MMAR394221 MMAR10_1708MMAR10_2223MMAR10_2241MMAR10_3016
MMAG342108 AMB0884AMB0244AMB4506
MLOT266835 MLR0681MLR7511MLL6903MLL4735
MFLA265072 MFLA_2100MFLA_2099MFLA_2251MFLA_2517
MEXT419610 MEXT_3319MEXT_2596MEXT_0899MEXT_0939
MCAP243233 MCA_2335MCA_2336MCA_0018MCA_2338
MAQU351348 MAQU_3763MAQU_3764MAQU_3050MAQU_3766
MABS561007 MAB_2850CMAB_4928CMAB_1667
LPNE400673 LPC_2716LPC_2717LPC_3243LPC_1291
LPNE297246 LPP0637LPP0636LPP3004LPP1810
LPNE297245 LPL0621LPL0620LPL2865LPL1811
LPNE272624 LPG0587LPG0586LPG2936LPG1846
LCHO395495 LCHO_3961LCHO_3962LCHO_3944LCHO_3909
KPNE272620 GKPORF_B2727GKPORF_B2726GKPORF_B2724GKPORF_B2725
JSP375286 MMA_2949MMA_2950MMA_0830MMA_0172
JSP290400 JANN_2181JANN_3896JANN_3912JANN_0901
ILOI283942 IL2219IL2218IL2216IL2217
HSOM228400 HSM_1901HSM_1900HSM_0436
HSOM205914 HS_0010HS_0009HS_1575
HNEP81032 HNE_2300HNE_1049HNE_1369HNE_0301
HINF71421 HI_0305HI_0304HI_0303HI_1531
HINF374930 CGSHIEE_01525CGSHIEE_01530CGSHIEE_01535CGSHIEE_05235
HINF281310 NTHI0416NTHI0415NTHI0414NTHI1602
HHAL349124 HHAL_0939HHAL_0938HHAL_0933HHAL_0935
HDUC233412 HD_1795HD_1794HD_1793
HCHE349521 HCH_00551HCH_00550HCH_01528HCH_00547
HARS204773 HEAR2739HEAR2740HEAR0847HEAR0146
GOXY290633 GOX1459GOX1976GOX1861
GFOR411154 GFO_1442GFO_1646GFO_1741
GBET391165 GBCGDNIH1_1879GBCGDNIH1_2189GBCGDNIH1_0112
FTUL458234 FTA_1285FTA_1286FTA_0731FTA_1357
FTUL418136 FTW_0892FTW_0891FTW_0692FTW_0819
FTUL401614 FTN_0867FTN_0866FTN_1271FTN_0804
FTUL393115 FTF0986FTF0985FTF1252FTF0926
FTUL393011 FTH_1192FTH_1193FTH_0694FTH_1256
FTUL351581 FTL_1215FTL_1216FTL_0692FTL_1284
FSP1855 FRANEAN1_1695FRANEAN1_2111FRANEAN1_5406
FRANT FT.0987FT.0986FT.1253GSHB
FPHI484022 FPHI_1753FPHI_1754FPHI_1413FPHI_1813
ESP42895 ENT638_3353ENT638_3352ENT638_3350ENT638_3351
ELIT314225 ELI_02690ELI_02920ELI_05990
EFER585054 EFER_2888EFER_2887EFER_2885EFER_2886
ECOO157 YQGFYQGEYGGJGSHB
ECOL83334 ECS3825ECS3824ECS3822ECS3823
ECOL585397 ECED1_3412ECED1_3411ECED1_3409ECED1_3410
ECOL585057 ECIAI39_3367ECIAI39_3366ECIAI39_3364ECIAI39_3365
ECOL585056 ECUMN_3301ECUMN_3300ECUMN_3298ECUMN_3299
ECOL585055 EC55989_3242EC55989_3241EC55989_3239EC55989_3240
ECOL585035 ECS88_3231ECS88_3230ECS88_3228ECS88_3229
ECOL585034 ECIAI1_3082ECIAI1_3081ECIAI1_3079ECIAI1_3080
ECOL481805 ECOLC_0765ECOLC_0766ECOLC_0768ECOLC_0767
ECOL469008 ECBD_0791ECBD_0792ECBD_0794ECBD_0793
ECOL439855 ECSMS35_3091ECSMS35_3090ECSMS35_3088ECSMS35_3089
ECOL413997 ECB_02779ECB_02778ECB_02776ECB_02777
ECOL409438 ECSE_3217ECSE_3216ECSE_3214ECSE_3215
ECOL405955 APECO1_3572APECO1_3573APECO1_3575APECO1_3574
ECOL364106 UTI89_C3338UTI89_C3337UTI89_C3335UTI89_C3336
ECOL362663 ECP_2943ECP_2942ECP_2940ECP_2941
ECOL331111 ECE24377A_3292ECE24377A_3291ECE24377A_3289ECE24377A_3290
ECOL316407 ECK2944:JW2916:B2949ECK2943:JW2915:B2948ECK2941:JW2913:B2946ECK2942:JW2914:B2947
ECOL199310 C3535C3534C3532C3533
ECAR218491 ECA3926ECA3925ECA3923ECA3924
DSHI398580 DSHI_1064DSHI_3083DSHI_3099DSHI_2829
DNOD246195 DNO_1098DNO_0433DNO_1218
DARO159087 DARO_3892DARO_3893DARO_3586DARO_0010
CVIO243365 CV_3910CV_3909CV_0367CV_4275
CVES412965 COSY_0050COSY_0119COSY_0055
CTEP194439 CT_0082CT_0663CT_2005
CSP501479 CSE45_0906CSE45_3646CSE45_0965CSE45_4348
CSAL290398 CSAL_0059CSAL_0058CSAL_0049CSAL_0057
CPSY167879 CPS_1251CPS_1252CPS_1254CPS_1253
CJAP155077 CJA_0084CJA_0083CJA_0070CJA_0081
CBUR434922 COXBU7E912_2194COXBU7E912_2193COXBU7E912_0106
CBUR360115 COXBURSA331_A2220COXBURSA331_A2219COXBURSA331_A2161COXBURSA331_A2078
CBUR227377 CBU_2094CBU_2093CBU_1960CBU_1875
BVIE269482 BCEP1808_0799BCEP1808_0798BCEP1808_0608BCEP1808_2963
BTRI382640 BT_1141BT_0659BT_0605BT_0266
BTHA271848 BTH_I1463BTH_I1462BTH_I1192BTH_I0410
BSUI470137 BSUIS_B0594BSUIS_A0507BSUIS_B0754BSUIS_A1971
BSUI204722 BR_A0597BR_0480BR_A0762BR_2131
BSP376 BRADO4497BRADO1081BRADO6105BRADO0180
BSP36773 BCEP18194_A3963BCEP18194_A3962BCEP18194_A3719BCEP18194_A6192
BSP107806 BU548BU410BU547
BQUI283165 BQ06360BQ03640BQ02980BQ02290
BPSE320373 BURPS668_3111BURPS668_3112BURPS668_3435BURPS668_0471
BPSE320372 BURPS1710B_A3433BURPS1710B_A3434BURPS1710B_A3748BURPS1710B_A0696
BPSE272560 BPSL2692BPSL2693BPSL2956BPSL0437
BPET94624 BPET0562BPET0561BPET3625BPET2832
BPER257313 BP0320BP0319BP0998BP1499
BPAR257311 BPP3931BPP3932BPP1163BPP1965
BOVI236 GBOORFA0615GBOORF0509GBOORFA0782GBOORF2124
BMEL359391 BAB2_0643BAB1_0506BAB2_0477BAB1_2135
BMEL224914 BMEII0672BMEI1454BMEII0529BMEI1996
BMAL320389 BMA10247_1858BMA10247_1859BMA10247_3313BMA10247_2831
BMAL320388 BMASAVP1_A0917BMASAVP1_A0916BMASAVP1_A0392BMASAVP1_A0188
BMAL243160 BMA_1996BMA_1997BMA_2472BMA_3214
BJAP224911 BLR5094BLR1492BLR7523BLL0668
BHEN283166 BH08220BH04450BH03960BH02420
BCIC186490 BCI_0480BCI_0481BCI_0482
BCEN331272 BCEN2424_0865BCEN2424_0864BCEN2424_0635BCEN2424_2863
BCEN331271 BCEN_0383BCEN_0382BCEN_0152BCEN_2249
BCAN483179 BCAN_B0598BCAN_A0487BCAN_A2176
BBRO257310 BB4404BB4405BB1379BB2152
BBAC360095 BARBAKC583_0838BARBAKC583_0300BARBAKC583_1229
BAPH198804 BUSG530BUSG395BUSG529
BAMB398577 BAMMC406_0755BAMMC406_0754BAMMC406_0559BAMMC406_2780
BAMB339670 BAMB_0738BAMB_0737BAMB_0535BAMB_2918
BABO262698 BRUAB2_0627BRUAB1_0502BRUAB2_0470BRUAB1_2106
ASP76114 EBA1756EBA1753EBA1094EBA2546
ASP62977 ACIAD0352ACIAD0353ACIAD2284ACIAD3518
ASP62928 AZO3460AZO3459AZO2832AZO3755
ASP232721 AJS_3572AJS_3573AJS_4114AJS_3907
ASAL382245 ASA_1194ASA_1195ASA_1197
APLE434271 APJL_0236APJL_0237APJL_0238
APLE416269 APL_0231APL_0232APL_0233
AMAR329726 AM1_0036AM1_3429AM1_5576
AMAR234826 AM859AM686AM203
AHYD196024 AHA_3131AHA_3130AHA_3127AHA_3128
AFER243159 AFE_0049AFE_0048AFE_3076AFE_0047
AEHR187272 MLG_0348MLG_0349MLG_0361MLG_0354
ADEH290397 ADEH_1232ADEH_3962ADEH_0247
ACRY349163 ACRY_0873ACRY_1876ACRY_2025
ACAU438753 AZC_2840AZC_0488AZC_2304AZC_4348
ABOR393595 ABO_0113ABO_0112ABO_0090ABO_0110
ABAU360910 BAV3011BAV3012BAV0862BAV1395
AAVE397945 AAVE_0908AAVE_0907AAVE_4766AAVE_4539


Organism features enriched in list (features available for 248 out of the 268 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.111e-61992
Arrangment:Clusters 0.0008985117
Disease:Bubonic_plague 0.005720666
Disease:Dysentery 0.005720666
Disease:Gastroenteritis 0.00993401013
Endospores:No 2.491e-1644211
Endospores:Yes 2.429e-7653
GC_Content_Range4:0-40 1.432e-2335213
GC_Content_Range4:40-60 0.0000338118224
GC_Content_Range4:60-100 7.810e-1195145
GC_Content_Range7:0-30 1.031e-7447
GC_Content_Range7:30-40 2.432e-1431166
GC_Content_Range7:50-60 2.458e-769107
GC_Content_Range7:60-70 2.502e-1292134
Genome_Size_Range5:0-2 1.549e-1427155
Genome_Size_Range5:2-4 0.000037562197
Genome_Size_Range5:4-6 1.195e-16124184
Genome_Size_Range5:6-10 3.056e-63547
Genome_Size_Range9:0-1 0.0002960327
Genome_Size_Range9:1-2 1.271e-1024128
Genome_Size_Range9:2-3 0.000027432120
Genome_Size_Range9:4-5 3.754e-76396
Genome_Size_Range9:5-6 2.634e-86188
Genome_Size_Range9:6-8 0.00001072938
Gram_Stain:Gram_Neg 1.226e-43220333
Gram_Stain:Gram_Pos 9.989e-337150
Habitat:Multiple 0.001562191178
Habitat:Specialized 6.526e-6853
Motility:No 4.244e-1131151
Motility:Yes 1.616e-6141267
Optimal_temp.:- 0.0020551125257
Optimal_temp.:25-30 5.867e-81919
Optimal_temp.:35-37 0.00001241313
Optimal_temp.:37 0.004663334106
Oxygen_Req:Aerobic 4.457e-7106185
Oxygen_Req:Anaerobic 3.178e-178102
Oxygen_Req:Facultative 0.0003568104201
Pathogenic_in:Animal 0.00674133766
Pathogenic_in:No 0.003564382226
Shape:Coccobacillus 0.00007251111
Shape:Coccus 1.107e-71482
Shape:Rod 2.965e-17196347
Shape:Sphere 0.0097308319
Shape:Spiral 0.0000627434
Temp._range:Mesophilic 0.0010210215473
Temp._range:Psychrophilic 0.005263889
Temp._range:Thermophilic 6.097e-6335



Back to top



ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 214
Effective number of orgs (counting one per cluster within 468 clusters): 172

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TSP28240 Thermotoga sp.0
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMAR399550 ncbi Staphylothermus marinus F11
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 230
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PAER178306 ncbi Pyrobaculum aerophilum IM21
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-11
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf41
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GMET269799 ncbi Geobacter metallireducens GS-151
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FALN326424 ncbi Frankia alni ACN14a0
ECAN269484 ncbi Ehrlichia canis Jake1
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1951
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7525   G7524   EG12366   EG10419   
WSUC273121
WPIP955 WD_0322
WPIP80849 WB_0846
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0657
TTHE262724 TT_C0298
TSP28240
TPSE340099 TETH39_1054
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TELO197221 TLR0908
TDEN326298 TMDEN_0527
TDEN243275
TACI273075
STOK273063
STHE322159 STER_1938
STHE299768 STR1960
STHE264199 STU1960
SSP84588 SYNW2309OR2553
SSP64471 GSYN2803
SSP387093
SSP1131 SYNCC9605_2440
SSOL273057 SSO0645
SSAP342451 SSP1180
SRUB309807 SRU_0495
SPYO370554 MGAS10750_SPY1888
SPYO370553 MGAS2096_SPY1829
SPYO370551 MGAS9429_SPY1807
SPYO319701 M28_SPY1780
SPYO198466 SPYM3_1797
SPYO193567 SPS1795
SPYO186103 SPYM18_2171
SPNE488221 SP70585_0253
SPNE487214 SPH_0310
SPNE487213 SPT_0243
SPNE171101 SPR0176
SPNE170187 SPN08052
SPNE1313 SPJ_0207
SMAR399550 SMAR_0746
SFUM335543 SFUM_0215
SAUR93062 SACOL1634
SAUR93061 SAOUHSC_01680
SAUR426430 NWMN_1480
SAUR418127 SAHV_1564
SAUR367830 SAUSA300_1537
SAUR359787 SAURJH1_1669
SAUR359786 SAURJH9_1635
SAUR282459 SAS1515
SAUR282458 SAR1654
SAUR273036 SAB1449C
SAUR196620 MW1529
SAUR158879 SA1406
SAUR158878 SAV1577
SACI330779
RXYL266117 RXYL_1513
RSAL288705
PTOR263820
PRUM264731
PMOB403833
PMAR93060 P9215_01961
PMAR74547 PMT2061
PMAR74546 PMT9312_0180
PMAR167546 P9301ORF_0199
PMAR167542 P9515ORF_0213
PMAR167540 PMM0178
PMAR167539 PRO_0203
PISL384616 PISL_0721
PINT246198
PHOR70601
PGIN242619 PG_2156
PFUR186497
PCAR338963 PCAR_3079
PAST100379
PARS340102 PARS_2302
PAER178306 PAE0645
PABY272844
OTSU357244 OTBS_0498
NSP387092
NSEN222891 NSE_0186
NPHA348780
MTHE349307 MTHE_1118
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2347
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML0028
MLAB410358
MKAN190192
MJAN243232 MJ_0620
MHYO295358 MHP181
MHYO262722 MHP7448_0200
MHYO262719 MHJ_0196
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1276
MBAR269797 MBAR_A3203
MART243272 MART0168
MAER449447 MAE_07270
MAEO419665
MACE188937 MA1361
LXYL281090 LXX10920
LMES203120 LEUM_0558
LJOH257314 LJ_0476
LINT363253 LI0503
LINT267671 LIC_10521
LINT189518 LA3709
LHEL405566 LHV_0440
LGAS324831 LGAS_0423
LDEL390333 LDB1605
LDEL321956 LBUL_1484
LBRE387344 LVIS_1221
LBOR355277 LBJ_0436
LBOR355276 LBL_2641
LBIF456481 LEPBI_I3376
LBIF355278 LBF_3262
LACI272621 LBA0419
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HBUT415426 HBUT_0019
HACI382638
GURA351605 GURA_4289
GSUL243231 GSU_0446
GMET269799 GMET_3387
FSUC59374
FSP106370
FNUC190304 FN1215
FNOD381764
FALN326424
ECAN269484 ECAJ_0670
DVUL882
DSP255470 CBDBA67
DSP216389 DEHABAV1_0048
DRAD243230 DR_0357
DGEO319795 DGEO_0426
DETH243164 DET_0051
DDES207559
CTRA471473 CTLON_0458
CTRA471472 CTL0463
CSUL444179
CPRO264201 PC1755
CPNE182082 CPB0140
CPNE138677 CPJ0139
CPNE115713 CPN0139
CPNE115711 CP_0633
CPEL335992 SAR11_0697
CMUR243161 TC_0483
CMET456442
CMAQ397948 CMAQ_0151
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK1037
CHOM360107
CFET360106
CFEL264202 CF0373
CDES477974 DAUD_2054
CCUR360105
CCON360104
CCAV227941 CCA_00630
CABO218497 CAB604
BXEN266265
BTUR314724
BLON206672
BHER314723
BGAR290434
BFRA295405 BF2056
BFRA272559 BF2109
BBUR224326
BBAC264462 BD3271
BAPH372461 BCC_360
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667 ARTH_2234
APER272557
ALAI441768
AFUL224325
ACEL351607 ACEL_1704
ABUT367737
AAUR290340 AAUR_2233
AAEO224324


Organism features enriched in list (features available for 201 out of the 214 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00185921217
Arrangment:Pairs 0.009028029112
Disease:Pharyngitis 0.000181988
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0014862911
Disease:bronchitis_and_pneumonitis 0.000181988
Endospores:No 2.015e-20124211
Endospores:Yes 2.449e-8253
GC_Content_Range4:0-40 3.093e-10108213
GC_Content_Range4:60-100 3.091e-824145
GC_Content_Range7:0-30 0.00628472447
GC_Content_Range7:30-40 1.748e-784166
GC_Content_Range7:50-60 0.000559223107
GC_Content_Range7:60-70 3.148e-821134
Genome_Size_Range5:0-2 1.364e-23105155
Genome_Size_Range5:2-4 0.006282580197
Genome_Size_Range5:4-6 1.925e-2314184
Genome_Size_Range5:6-10 3.163e-7247
Genome_Size_Range9:0-1 2.730e-62127
Genome_Size_Range9:1-2 1.909e-1684128
Genome_Size_Range9:2-3 0.000079059120
Genome_Size_Range9:4-5 1.619e-11796
Genome_Size_Range9:5-6 4.785e-10788
Genome_Size_Range9:6-8 1.193e-6138
Gram_Stain:Gram_Neg 1.510e-981333
Habitat:Host-associated 0.002908885206
Habitat:Multiple 4.445e-736178
Habitat:Specialized 0.00001013353
Habitat:Terrestrial 0.0010715331
Motility:No 7.552e-674151
Motility:Yes 0.000468874267
Optimal_temp.:- 0.001627673257
Optimal_temp.:30-37 0.00371501218
Oxygen_Req:Aerobic 0.000014242185
Oxygen_Req:Anaerobic 1.780e-860102
Oxygen_Req:Facultative 0.002289655201
Oxygen_Req:Microaerophilic 0.00085961318
Salinity:Extreme_halophilic 0.007407167
Shape:Coccus 9.050e-74882
Shape:Irregular_coccus 8.670e-91717
Shape:Rod 9.558e-2562347
Shape:Sphere 0.00006401519
Shape:Spiral 4.051e-102934
Temp._range:Hyperthermophilic 1.106e-82123
Temp._range:Mesophilic 0.0001791147473
Temp._range:Thermophilic 0.00091332135



Back to top



ORGANISMS ENRICHED FOR GROUP:




Back to top



ORGANISMS DEPLETED FOR GROUP:




Back to top



PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002430.7393
GLYCOCAT-PWY (glycogen degradation I)2462140.7175
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912340.7071
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962350.6990
PWY-1269 (CMP-KDO biosynthesis I)3252470.6957
PWY-4041 (γ-glutamyl cycle)2792260.6910
PWY-5918 (heme biosynthesis I)2722220.6863
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902300.6841
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392490.6716
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862260.6699
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251960.6696
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482500.6549
PWY-5913 (TCA cycle variation IV)3012300.6521
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831700.6497
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911730.6387
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951740.6300
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181860.6269
TYRFUMCAT-PWY (tyrosine degradation I)1841650.6101
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292340.6005
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491430.5997
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552000.5954
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911630.5684
PWY-5028 (histidine degradation II)1301260.5591
DAPLYSINESYN-PWY (lysine biosynthesis I)3422320.5530
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982520.5453
P344-PWY (acrylonitrile degradation)2101680.5326
PWY-5148 (acyl-CoA hydrolysis)2271760.5278
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262210.5242
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162540.5165
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491850.5155
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491850.5155
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761470.5134
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742380.5104
AST-PWY (arginine degradation II (AST pathway))1201130.5046
PWY0-501 (lipoate biosynthesis and incorporation I)3852410.5030
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222530.4956
KDOSYN-PWY (KDO transfer to lipid IVA I)1801460.4904
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791450.4872
REDCITCYC (TCA cycle variation II)1741410.4780
GLUCONSUPER-PWY (D-gluconate degradation)2291690.4740
PWY-46 (putrescine biosynthesis III)1381200.4734
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002010.4668
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891960.4660
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96930.4643
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351170.4637
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)1121030.4628
PWY-5386 (methylglyoxal degradation I)3052020.4591
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381180.4578
PWY-5188 (tetrapyrrole biosynthesis I)4392530.4559
P601-PWY (D-camphor degradation)95910.4521
PWY-3162 (tryptophan degradation V (side chain pathway))94900.4489
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561260.4407
PWY-5340 (sulfate activation for sulfonation)3852310.4363
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652230.4343
GLUT-REDOX-PWY (glutathione redox reactions II)2461710.4323
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112000.4293
PWY-5938 ((R)-acetoin biosynthesis I)3762260.4259
PWY1-3 (polyhydroxybutyrate biosynthesis)1151000.4223
PWY-6087 (4-chlorocatechol degradation)2231580.4198
GALACTCAT-PWY (D-galactonate degradation)104930.4196
VALDEG-PWY (valine degradation I)2901890.4176
PWY-6389 ((S)-acetoin biosynthesis)3682210.4134
PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)1781340.4121
LIPASYN-PWY (phospholipases)2121500.4024
GALACTARDEG-PWY (D-galactarate degradation I)1511180.4013
POLYISOPRENSYN-PWY (polyisoprenoid biosynthesis (E. coli))116980.4006
PWY-5497 (purine nucleotides degradation IV (anaerobic))1223-.4043
P122-PWY (heterolactic fermentation)1192-.4057



Back to top



PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7524   EG12366   EG10419   
G75250.9998510.9991290.999231
G75240.9991990.999394
EG123660.999323
EG10419



Back to top



PAIRWISE BLAST SCORES:

  G7525   G7524   EG12366   EG10419   
G75250.0f0---
G7524-0.0f0--
EG12366--0.0f0-
EG10419---0.0f0



Back to top



PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



Back to top



GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10419 EG12366 G7524 G7525 (centered at G7524)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7525   G7524   EG12366   EG10419   
406/623316/623417/623290/623
AAUR290340:2:Tyes--0-
AAVE397945:0:Tyes1037923571
ABAC204669:0:Tyes0-2703-
ABAU360910:0:Tyes215321540531
ABOR393595:0:Tyes2322020
ACAU438753:0:Tyes2384018423913
ACEL351607:0:Tyes-0--
ACRY349163:8:Tyes0-10091159
ADEH290397:0:Tyes99437530-
AEHR187272:0:Tyes01136
AFER243159:0:Tyes2129880
AHYD196024:0:Tyes4301
AMAR234826:0:Tyes468-3550
AMAR329726:9:Tyes0-33535482
AMET293826:0:Tyes0-572-
ANAE240017:0:Tyes258-0-
AORE350688:0:Tyes422-0-
APHA212042:0:Tyes--5660
APLE416269:0:Tyes012-
APLE434271:0:Tno012-
ASAL382245:5:Tyes01-2
ASP1667:3:Tyes--0-
ASP232721:2:Tyes01549346
ASP62928:0:Tyes6386370933
ASP62977:0:Tyes0118142939
ASP76114:2:Tyes3833820870
AVAR240292:3:Tyes1972--0
BABO262698:0:Tno148-0-
BABO262698:1:Tno-0-1546
BAMB339670:3:Tno20520402438
BAMB398577:3:Tno19619502250
BAMY326423:0:Tyes75-0-
BANT260799:0:Tno72-0-
BANT261594:2:Tno74-0-
BANT568206:2:Tyes78-0-
BANT592021:2:Tno79-0-
BAPH198804:0:Tyes134-0133
BAPH372461:0:Tyes0---
BBAC264462:0:Tyes--0-
BBAC360095:0:Tyes503-0861
BBRO257310:0:Tyes306230630790
BCAN483179:0:Tno0---
BCAN483179:1:Tno-0-1637
BCEN331271:2:Tno23123002124
BCEN331272:3:Tyes23022902225
BCER226900:1:Tyes72-0-
BCER288681:0:Tno72-0-
BCER315749:1:Tyes60-0-
BCER405917:1:Tyes75-0-
BCER572264:1:Tno76-0-
BCIC186490:0:Tyes01-2
BCLA66692:0:Tyes0-68-
BFRA272559:1:Tyes-0--
BFRA295405:0:Tno-0--
BHAL272558:0:Tyes0-81-
BHEN283166:0:Tyes5461911440
BJAP224911:0:Fyes445683669000
BLIC279010:0:Tyes128-0-
BMAL243160:1:Tno014281104
BMAL320388:1:Tno7167152000
BMAL320389:1:Tyes011428953
BMEL224914:0:Tno145-0-
BMEL224914:1:Tno-0-547
BMEL359391:0:Tno149-0-
BMEL359391:1:Tno-0-1495
BOVI236:0:Tyes0-122-
BOVI236:1:Tyes-0-1396
BPAR257311:0:Tno264626470757
BPER257313:0:Tyes106051055
BPET94624:0:Tyes1031062290
BPSE272560:1:Tyes2271227225350
BPSE320372:1:Tno2614261529270
BPSE320373:1:Tno2537253828570
BPUM315750:0:Tyes98-0-
BQUI283165:0:Tyes362117570
BSP107806:2:Tyes138-0137
BSP36773:2:Tyes24424302517
BSP376:0:Tyes409684556280
BSUB:0:Tyes195-0-
BSUI204722:0:Tyes0-154-
BSUI204722:1:Tyes-0-1597
BSUI470137:0:Tno0-145-
BSUI470137:1:Tno-0-1421
BTHA271848:1:Tno104210417720
BTHE226186:0:Tyes-03311-
BTHU281309:1:Tno71-0-
BTHU412694:1:Tno69-0-
BTRI382640:1:Tyes7753553070
BVIE269482:7:Tyes19119002334
BWEI315730:4:Tyes69-0-
CABO218497:0:Tyes-0--
CACE272562:1:Tyes390-0-
CAULO:0:Tyes-3299-0
CBEI290402:0:Tyes269-0-
CBLO203907:0:Tyes01--
CBLO291272:0:Tno01--
CBOT36826:1:Tno0-396-
CBOT441770:0:Tyes0-413-
CBOT441771:0:Tno0-415-
CBOT441772:1:Tno0-376-
CBOT498213:1:Tno0-414-
CBOT508765:1:Tyes277-0-
CBOT515621:2:Tyes0-412-
CBOT536232:0:Tno0-468-
CBUR227377:1:Tyes212211830
CBUR360115:1:Tno142141850
CBUR434922:2:Tno20001999-0
CCAV227941:1:Tyes-0--
CCHL340177:0:Tyes-14130-
CDES477974:0:Tyes--0-
CDIF272563:1:Tyes0-1184-
CDIP257309:0:Tyes-6340-
CEFF196164:0:Fyes0-451-
CFEL264202:1:Tyes-0--
CGLU196627:0:Tyes01443--
CHUT269798:0:Tyes-1750-
CHYD246194:0:Tyes121-0-
CJAP155077:0:Tyes1514012
CJEI306537:0:Tyes0---
CKLU431943:1:Tyes412-0-
CMAQ397948:0:Tyes---0
CMIC31964:2:Tyes0-964-
CMIC443906:2:Tyes242-0-
CMUR243161:1:Tyes-0--
CNOV386415:0:Tyes0-212-
CPEL335992:0:Tyes---0
CPER195102:1:Tyes0-254-
CPER195103:0:Tno0-242-
CPER289380:3:Tyes0-244-
CPHY357809:0:Tyes0-6-
CPNE115711:1:Tyes-0--
CPNE115713:0:Tno-0--
CPNE138677:0:Tno-0--
CPNE182082:0:Tno-0--
CPRO264201:0:Fyes-0--
CPSY167879:0:Tyes0132
CRUT413404:0:Tyes0--4
CSAL290398:0:Tyes9807
CSP501479:6:Fyes---0
CSP501479:7:Fyes-0--
CSP501479:8:Fyes0-58-
CSP78:2:Tyes-4348-0
CTEP194439:0:Tyes05731896-
CTET212717:0:Tyes0-892-
CTRA471472:0:Tyes-0--
CTRA471473:0:Tno-0--
CVES412965:0:Tyes0-655
CVIO243365:0:Tyes3640363904030
DARO159087:0:Tyes3917391836100
DETH243164:0:Tyes0---
DGEO319795:1:Tyes-0--
DHAF138119:0:Tyes0-713-
DNOD246195:0:Tyes640-0759
DOLE96561:0:Tyes-0159-
DPSY177439:2:Tyes-15700-
DRAD243230:3:Tyes-0--
DRED349161:0:Tyes0-1721-
DSHI398580:5:Tyes0204020561785
DSP216389:0:Tyes0---
DSP255470:0:Tno0---
ECAN269484:0:Tyes---0
ECAR218491:0:Tyes3201
ECHA205920:0:Tyes121--0
ECOL199310:0:Tno3201
ECOL316407:0:Tno3201
ECOL331111:6:Tno3201
ECOL362663:0:Tno3201
ECOL364106:1:Tno3201
ECOL405955:2:Tyes3201
ECOL409438:6:Tyes3201
ECOL413997:0:Tno3201
ECOL439855:4:Tno3201
ECOL469008:0:Tno0132
ECOL481805:0:Tno0132
ECOL585034:0:Tno3201
ECOL585035:0:Tno3201
ECOL585055:0:Tno3201
ECOL585056:2:Tno3201
ECOL585057:0:Tno3201
ECOL585397:0:Tno3201
ECOL83334:0:Tno3201
ECOLI:0:Tno3201
ECOO157:0:Tno3201
EFAE226185:3:Tyes0-725-
EFER585054:1:Tyes3201
ELIT314225:0:Tyes0-46675
ERUM254945:0:Tyes0--108
ERUM302409:0:Tno0--108
ESP42895:1:Tyes3201
FJOH376686:0:Tyes-04480-
FMAG334413:1:Tyes0-156-
FNUC190304:0:Tyes--0-
FPHI484022:1:Tyes3463470407
FRANT:0:Tno53522900
FSP1855:0:Tyes0-4193648
FTUL351581:0:Tno4514520507
FTUL393011:0:Tno4104110465
FTUL393115:0:Tyes52512880
FTUL401614:0:Tyes63624650
FTUL418136:0:Tno1711700120
FTUL458234:0:Tno4114120462
GBET391165:0:Tyes-176720760
GFOR411154:0:Tyes-0204299
GKAU235909:1:Tyes53-0-
GMET269799:1:Tyes--0-
GOXY290633:5:Tyes-0514399
GSUL243231:0:Tyes--0-
GTHE420246:1:Tyes50-0-
GURA351605:0:Tyes--0-
GVIO251221:0:Tyes--7020
HARS204773:0:Tyes243824396480
HAUR316274:2:Tyes527-0-
HBUT415426:0:Tyes---0
HCHE349521:0:Tyes329360
HDUC233412:0:Tyes210-
HHAL349124:0:Tyes6502
HINF281310:0:Tyes2101076
HINF374930:0:Tyes012639
HINF71421:0:Tno2101205
HMOD498761:0:Tyes0-2201-
HNEP81032:0:Tyes197074010560
HSOM205914:1:Tyes101566-
HSOM228400:0:Tno148114800-
ILOI283942:0:Tyes3201
JSP290400:1:Tyes1290303230480
JSP375286:0:Tyes282128226750
KPNE272620:2:Tyes3201
KRAD266940:2:Fyes7630--
LACI272621:0:Tyes0---
LBIF355278:2:Tyes-0--
LBIF456481:2:Tno-0--
LBOR355276:1:Tyes-0--
LBOR355277:1:Tno-0--
LBRE387344:2:Tyes0---
LCAS321967:1:Tyes0-733-
LCHO395495:0:Tyes5253350
LDEL321956:0:Tyes0---
LDEL390333:0:Tyes0---
LGAS324831:0:Tyes0---
LHEL405566:0:Tyes0---
LINN272626:1:Tno30-0-
LINT189518:1:Tyes-0--
LINT267671:1:Tno-0--
LINT363253:3:Tyes0---
LJOH257314:0:Tyes0---
LLAC272622:5:Tyes44-0-
LLAC272623:0:Tyes39-0-
LMES203120:1:Tyes0---
LMON169963:0:Tno32-0-
LMON265669:0:Tyes32-0-
LPLA220668:0:Tyes263-0-
LPNE272624:0:Tno1023411258
LPNE297245:1:Fno1022421175
LPNE297246:1:Fyes1023671163
LPNE400673:0:Tno1395139619160
LREU557436:0:Tyes0-210-
LSAK314315:0:Tyes0-382-
LSPH444177:1:Tyes72-0-
LWEL386043:0:Tyes30-0-
LXYL281090:0:Tyes0---
MABS561007:1:Tyes118532650-
MACE188937:0:Tyes---0
MAER449447:0:Tyes---0
MAQU351348:2:Tyes7087090711
MART243272:0:Tyes0---
MAVI243243:0:Tyes-01938-
MBAR269797:1:Tyes---0
MBOV233413:0:Tno-02375-
MBOV410289:0:Tno-02330-
MBUR259564:0:Tyes---0
MCAP243233:0:Tyes2194219502197
MEXT419610:0:Tyes24371713040
MFLA265072:0:Tyes10152416
MGIL350054:3:Tyes-01873-
MHYO262719:0:Tyes--0-
MHYO262722:0:Tno--0-
MHYO295358:0:Tno--0-
MJAN243232:2:Tyes---0
MLEP272631:0:Tyes-0--
MLOT266835:2:Tyes0541449193133
MMAG342108:0:Tyes-64004262
MMAR394221:0:Tyes05155331297
MMAZ192952:0:Tyes---0
MPET420662:1:Tyes526525200
MPUL272635:0:Tyes19-0-
MSME246196:0:Tyes-23860-
MSP164756:1:Tno-19530-
MSP164757:0:Tno-23120-
MSP189918:2:Tyes-19790-
MSP266779:3:Tyes99837803228
MSP400668:0:Tyes1038513853
MSP409:2:Tyes3080496110680
MSUC221988:0:Tyes23220-
MTBCDC:0:Tno-02494-
MTBRV:0:Tno-02355-
MTHE264732:0:Tyes1025-0-
MTHE349307:0:Tyes---0
MTUB336982:0:Tno-02346-
MTUB419947:0:Tyes-02432-
MVAN350058:0:Tyes034001179-
MXAN246197:0:Tyes5615193810850
NARO279238:0:Tyes22602701420
NEUR228410:0:Tyes8988990520
NEUT335283:2:Tyes10588496
NFAR247156:2:Tyes223241240-
NGON242231:0:Tyes011453575
NHAM323097:2:Tyes2061328729240
NMEN122586:0:Tno10565212
NMEN122587:0:Tyes93893701137
NMEN272831:0:Tno10532170
NMEN374833:0:Tno94494301152
NMUL323848:3:Tyes224322421620
NOCE323261:1:Tyes2402410-
NSEN222891:0:Tyes---0
NSP103690:6:Tyes0--765
NSP35761:1:Tyes11290620-
NWIN323098:0:Tyes1913266624770
OANT439375:4:Tyes663-0-
OANT439375:5:Tyes-0-180
OCAR504832:0:Tyes1388291728510
OIHE221109:0:Tyes42-0-
OTSU357244:0:Fyes0---
PACN267747:0:Tyes0163--
PAER178306:0:Tyes---0
PAER208963:0:Tyes01153
PAER208964:0:Tno01153
PARC259536:0:Tyes019151710
PARS340102:0:Tyes---0
PATL342610:0:Tyes2122080
PCAR338963:0:Tyes--0-
PCRY335284:1:Tyes0113841965
PDIS435591:0:Tyes-0390-
PENT384676:0:Tyes111008
PFLU205922:0:Tyes2423021
PFLU216595:1:Tyes2625023
PFLU220664:0:Tyes2625023
PGIN242619:0:Tyes--0-
PHAL326442:1:Tyes3201
PING357804:0:Tyes0132
PISL384616:0:Tyes---0
PLUM243265:0:Fyes0132
PLUT319225:0:Tyes-4050-
PMAR146891:0:Tyes657--0
PMAR167539:0:Tyes---0
PMAR167540:0:Tyes---0
PMAR167542:0:Tyes---0
PMAR167546:0:Tyes---0
PMAR167555:0:Tyes--4820
PMAR59920:0:Tno--01470
PMAR74546:0:Tyes---0
PMAR74547:0:Tyes---0
PMAR93060:0:Tyes---0
PMEN399739:0:Tyes01133
PMUL272843:1:Tyes210-
PNAP365044:8:Tyes01732395
PPEN278197:0:Tyes125-0-
PPRO298386:2:Tyes3201
PPUT160488:0:Tno111008
PPUT351746:0:Tyes111008
PPUT76869:0:Tno111008
PSP117:0:Tyes135702577617
PSP296591:2:Tyes1036923377
PSP312153:0:Tyes181701750
PSP56811:2:Tyes01778383
PSTU379731:0:Tyes121109
PSYR205918:0:Tyes3132034
PSYR223283:2:Tyes32400
PTHE370438:0:Tyes201-0-
RAKA293614:0:Fyes-0202-
RALB246199:0:Tyes1475-0-
RBEL336407:0:Tyes79601142-
RBEL391896:0:Fno9430273-
RCAN293613:0:Fyes7370171-
RCAS383372:0:Tyes1554-0-
RCON272944:0:Tno-0171-
RDEN375451:4:Tyes5462095-0
RETL347834:5:Tyes15216404780
REUT264198:3:Tyes41541425710
REUT381666:2:Tyes2517251827500
RFEL315456:2:Tyes-01092-
RFER338969:1:Tyes117111700558
RLEG216596:6:Tyes17487085290
RMAS416276:1:Tyes3230143-
RMET266264:2:Tyes2486248727270
RPAL258594:0:Tyes28045998370
RPAL316055:0:Tyes29823535110
RPAL316056:0:Tyes193347144040
RPAL316057:0:Tyes2648398337500
RPAL316058:0:Tyes2029410414390
RPOM246200:1:Tyes201503266105
RPRO272947:0:Tyes2940136-
RRIC392021:0:Fno4170174-
RRIC452659:0:Tyes4370184-
RRUB269796:1:Tyes2598247903109
RSOL267608:1:Tyes33333224640
RSP101510:3:Fyes587623780-
RSP357808:0:Tyes191-0-
RSPH272943:4:Tyes888225522630
RSPH349101:2:Tno883221422220
RSPH349102:5:Tyes1644100253
RTYP257363:0:Tno223061-
RXYL266117:0:Tyes--0-
SACI56780:0:Tyes104-0-
SAGA205921:0:Tno98-0-
SAGA208435:0:Tno122-0-
SAGA211110:0:Tyes90-0-
SALA317655:1:Tyes7620213395
SARE391037:0:Tyes8800--
SAUR158878:1:Tno--0-
SAUR158879:1:Tno--0-
SAUR196620:0:Tno--0-
SAUR273036:0:Tno--0-
SAUR282458:0:Tno--0-
SAUR282459:0:Tno--0-
SAUR359786:1:Tno--0-
SAUR359787:1:Tno--0-
SAUR367830:3:Tno--0-
SAUR418127:0:Tyes--0-
SAUR426430:0:Tno--0-
SAUR93061:0:Fno--0-
SAUR93062:1:Tno--0-
SAVE227882:1:Fyes17480454-
SBAL399599:3:Tyes2394239310
SBAL402882:1:Tno2273227210
SBOY300268:1:Tyes0132
SCO:2:Fyes01469--
SDEG203122:0:Tyes3202320103199
SDEN318161:0:Tyes01305306
SDYS300267:1:Tyes0132
SELO269084:0:Tyes0--73
SENT209261:0:Tno3201
SENT220341:0:Tno3201
SENT295319:0:Tno3201
SENT321314:2:Tno3201
SENT454169:2:Tno3201
SEPI176279:1:Tyes35-0-
SEPI176280:0:Tno35-0-
SERY405948:0:Tyes-57660-
SFLE198214:0:Tyes3201
SFLE373384:0:Tno3201
SFUM335543:0:Tyes--0-
SGLO343509:3:Tyes3201
SGOR29390:0:Tyes200-0-
SHAE279808:0:Tyes0-36-
SHAL458817:0:Tyes47747810
SHIGELLA:0:Tno3201
SLAC55218:1:Fyes1800110-0
SLOI323850:0:Tyes0121552156
SMAR399550:0:Tyes---0
SMED366394:3:Tyes55114303117
SMEL266834:2:Tyes9855864400
SMUT210007:0:Tyes27-0-
SONE211586:1:Tyes2472247110
SPEA398579:0:Tno53853910
SPNE1313:0:Tyes0---
SPNE170187:0:Tyes0---
SPNE171101:0:Tno0---
SPNE487213:0:Tno0---
SPNE487214:0:Tno0---
SPNE488221:0:Tno0---
SPRO399741:1:Tyes3201
SPYO160490:0:Tno88-0-
SPYO186103:0:Tno0---
SPYO193567:0:Tno0---
SPYO198466:0:Tno0---
SPYO286636:0:Tno98-0-
SPYO293653:0:Tno104-0-
SPYO319701:0:Tyes0---
SPYO370551:0:Tno0---
SPYO370552:0:Tno106-0-
SPYO370553:0:Tno0---
SPYO370554:0:Tyes0---
SRUB309807:1:Tyes-0--
SSAP342451:2:Tyes--0-
SSED425104:0:Tyes0128362837
SSOL273057:0:Tyes---0
SSON300269:1:Tyes3201
SSP1131:0:Tyes---0
SSP1148:0:Tyes3026-0875
SSP292414:1:Tyes-010-
SSP292414:2:Tyes524--0
SSP321327:0:Tyes--2600
SSP321332:0:Tyes--0350
SSP644076:2:Fyes-120-
SSP644076:5:Fyes0---
SSP644076:7:Fyes---0
SSP64471:0:Tyes---0
SSP84588:0:Tyes---0
SSP94122:1:Tyes0123012302
SSUI391295:0:Tyes0-2077-
SSUI391296:0:Tyes0-2088-
STHE264199:0:Tyes0---
STHE292459:0:Tyes1529-0-
STHE299768:0:Tno0---
STHE322159:2:Tyes0---
STRO369723:0:Tyes84302447-
STYP99287:1:Tyes3201
SWOL335541:0:Tyes0-1073-
TCRU317025:0:Tyes5402
TDEN292415:0:Tyes2466246502295
TDEN326298:0:Tyes0---
TELO197221:0:Tyes---0
TERY203124:0:Tyes--0576
TFUS269800:0:Tyes123015660-
TPSE340099:0:Tyes0---
TROS309801:1:Tyes370-0-
TSP1755:0:Tyes0-570-
TTEN273068:0:Tyes263-0-
TTHE262724:1:Tyes--0-
TTHE300852:2:Tyes--0-
TTUR377629:0:Tyes0133603
VCHO:0:Tyes0132
VCHO345073:1:Tno0132
VEIS391735:1:Tyes57757838510
VFIS312309:2:Tyes0132
VPAR223926:1:Tyes3201
VVUL196600:2:Tyes4201
VVUL216895:1:Tno0132
WPIP80849:0:Tyes---0
WPIP955:0:Tyes---0
XAUT78245:1:Tyes3594226437760
XAXO190486:0:Tyes01152186
XCAM190485:0:Tyes01138179
XCAM314565:0:Tno183182410
XCAM316273:0:Tno01152181
XCAM487884:0:Tno186185400
XFAS160492:2:Tno2052205301782
XFAS183190:1:Tyes109610970678
XFAS405440:0:Tno117411750797
XORY291331:0:Tno10363322
XORY342109:0:Tyes10382339
XORY360094:0:Tno12801282086
YENT393305:1:Tyes3201
YPES187410:5:Tno3201
YPES214092:3:Tno3201
YPES349746:2:Tno0132
YPES360102:3:Tyes0132
YPES377628:2:Tno3201
YPES386656:2:Tno0132
YPSE273123:2:Tno3201
YPSE349747:2:Tno0132
ZMOB264203:0:Tyes446012361620



Back to top