CANDIDATE ID: 1021

CANDIDATE ID: 1021

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9915883e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG10997 (mnmE) (b3706)
   Products of gene:
     - EG10997-MONOMER (GTP-binding protein with a role in modification of tRNA)
     - CPLX0-7608 (GTP-binding protein with a role in modification of tRNA)
     - CPLX0-7609 (complex involved in modification of tRNA)

- EG10937 (secB) (b3609)
   Products of gene:
     - SECB (SecB)
     - SEC-SECRETION-CPLX (Sec Protein Secretion Complex)

- EG10845 (rho) (b3783)
   Products of gene:
     - EG10845-MONOMER (transcription termination factor Rho monomer;  polarity suppressor)
       Regulatees:
        TU0-6941 (rhoL-rho)
     - CPLX0-2441 (transcription termination factor Rho)

- EG10375 (mnmG) (b3741)
   Products of gene:
     - EG10375-MONOMER (protein involved in a tRNA modification pathway)
     - CPLX0-7597 (protein involved in a tRNA modification pathway)
     - CPLX0-7609 (complex involved in modification of tRNA)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 333
Effective number of orgs (counting one per cluster within 468 clusters): 235

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py23
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB43
TSP1755 Thermoanaerobacter sp.3
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332233
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12513
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B4
SSP387093 ncbi Sulfurovum sp. NBC37-13
SSP292414 ncbi Ruegeria sp. TM10403
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SRUB309807 ncbi Salinibacter ruber DSM 138553
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis3
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAUR93062 ncbi Staphylococcus aureus aureus COL3
SAUR359787 ncbi Staphylococcus aureus aureus JH13
SAUR359786 ncbi Staphylococcus aureus aureus JH93
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2523
SAUR273036 ncbi Staphylococcus aureus RF1223
SAUR196620 ncbi Staphylococcus aureus aureus MW23
SAUR158879 ncbi Staphylococcus aureus aureus N3153
SAUR158878 ncbi Staphylococcus aureus aureus Mu503
SACI56780 ncbi Syntrophus aciditrophicus SB3
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.13
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RRIC452659 ncbi Rickettsia rickettsii Iowa3
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith3
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RMAS416276 ncbi Rickettsia massiliae MTU53
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
RFEL315456 ncbi Rickettsia felis URRWXCal24
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
RCON272944 ncbi Rickettsia conorii Malish 73
RCAS383372 ncbi Roseiflexus castenholzii DSM 139413
RCAN293613 ncbi Rickettsia canadensis McKiel4
RBEL391896 ncbi Rickettsia bellii OSU 85-3894
RBEL336407 ncbi Rickettsia bellii RML369-C3
RAKA293614 ncbi Rickettsia akari Hartford3
PTHE370438 ncbi Pelotomaculum thermopropionicum SI3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23803
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OTSU357244 ncbi Orientia tsutsugamushi Boryong3
OIHE221109 ncbi Oceanobacillus iheyensis HTE8313
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2553
NSP387092 ncbi Nitratiruptor sp. SB155-23
NSEN222891 ncbi Neorickettsia sennetsu Miyayama3
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC13
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53343
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LMON265669 ncbi Listeria monocytogenes 4b F23653
LMON169963 ncbi Listeria monocytogenes EGD-e3
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-003
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1303
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566013
LINN272626 ncbi Listeria innocua Clip112623
LCHO395495 ncbi Leptothrix cholodnii SP-64
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1973
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5503
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS13
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HNEP81032 Hyphomonas neptunium4
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf43
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-23
GSUL243231 ncbi Geobacter sulfurreducens PCA3
GOXY290633 ncbi Gluconobacter oxydans 621H3
GMET269799 ncbi Geobacter metallireducens GS-153
GKAU235909 ncbi Geobacillus kaustophilus HTA4263
GFOR411154 ncbi Gramella forsetii KT08033
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FJOH376686 ncbi Flavobacterium johnsoniae UW1013
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25943
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas3
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
ECAN269484 ncbi Ehrlichia canis Jake3
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough3
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-13
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G203
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CTET212717 ncbi Clostridium tetani E883
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE453
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)3
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE253
CPER289380 ncbi Clostridium perfringens SM1013
CPER195102 ncbi Clostridium perfringens 133
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10623
CMUR243161 ncbi Chlamydia muridarum Nigg3
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334063
CFEL264202 ncbi Chlamydophila felis Fe/C-563
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C3
CCAV227941 ncbi Chlamydophila caviae GPIC3
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN4
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CAULO ncbi Caulobacter crescentus CB154
CACE272562 ncbi Clostridium acetobutylicum ATCC 8243
CABO218497 ncbi Chlamydophila abortus S26/33
BWEI315730 ncbi Bacillus weihenstephanensis KBAB43
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHU412694 ncbi Bacillus thuringiensis Al Hakam3
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-273
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1683
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)4
BQUI283165 ncbi Bartonella quintana Toulouse4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145803
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-14
BHAL272558 ncbi Bacillus halodurans C-1253
BCLA66692 ncbi Bacillus clausii KSM-K163
BCIC186490 Candidatus Baumannia cicadellinicola3
BCER572264 ncbi Bacillus cereus 03BB1023
BCER405917 Bacillus cereus W3
BCER288681 ncbi Bacillus cereus E33L3
BCER226900 ncbi Bacillus cereus ATCC 145793
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5834
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)3
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)4
BANT592021 ncbi Bacillus anthracis A02483
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor3
BANT260799 ncbi Bacillus anthracis Sterne3
BAMY326423 ncbi Bacillus amyloliquefaciens FZB423
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AORE350688 ncbi Alkaliphilus oremlandii OhILAs3
AMET293826 ncbi Alkaliphilus metalliredigens QYMF3
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ACRY349163 ncbi Acidiphilium cryptum JF-53
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAEO224324 ncbi Aquifex aeolicus VF53


Names of the homologs of the genes in the group in each of these orgs
  EG10997   EG10937   EG10845   EG10375   
YPSE349747 YPSIP31758_4158YPSIP31758_0078YPSIP31758_0180YPSIP31758_4186
YPSE273123 YPTB3949YPTB0063YPTB0167YPTB3976
YPES386656 YPDSF_3931YPDSF_3838YPDSF_3485YPDSF_3905
YPES377628 YPN_3960YPN_3783YPN_0096YPN_3987
YPES360102 YPA_4148YPA_3475YPA_0151YPA_4175
YPES349746 YPANGOLA_A4183YPANGOLA_A0072YPANGOLA_A0511YPANGOLA_A4212
YPES214092 YPO4103YPO0067YPO3867YPO4130
YPES187410 Y4118Y0074Y0361Y4144
YENT393305 YE4178YE0080YE0168YE4215
XORY360094 XOOORF_5262XOOORF_0610XOOORF_0504XOOORF_0225
XORY342109 XOO4368XOO3966XOO4057XOO0207
XORY291331 XOO4634XOO4197XOO4303XOO0227
XFAS405440 XFASM12_2312XFASM12_1222XFASM12_0921
XFAS183190 PD_2119PD_1065PD_2055PD_0773
XFAS160492 XF2778XF1801XF2699XF2106
XCAM487884 XCC-B100_4464XCC-B100_0224XCC-B100_3960XCC-B100_0403
XCAM316273 XCAORF_4594XCAORF_4324XCAORF_0522XCAORF_4137
XCAM314565 XC_4328XC_0213XC_3850XC_0389
XCAM190485 XCC4238XCC0203XCC3778XCC0377
XAXO190486 XAC4370XAC0221XAC3831XAC0377
XAUT78245 XAUT_1805XAUT_1824XAUT_1834
VVUL216895 VV1_1008VV1_1278VV1_0937VV1_1010
VVUL196600 VV0002VV3085VV3181VV3262
VPAR223926 VP0002VP2831VP3000VP3080
VFIS312309 VF0002VF2349VF0058VF2575
VEIS391735 VEIS_5011VEIS_0041VEIS_2604VEIS_1063
VCHO345073 VC0395_A2515VC0395_A2227VC0395_A2699VC0395_A2517
VCHO VC0003VC2653VC0307VC2775
TTUR377629 TERTU_4738TERTU_4425TERTU_0210TERTU_4735
TTEN273068 TTE2796TTE0138TTE2795
TSP1755 TETH514_2409TETH514_0089TETH514_2408
TPSE340099 TETH39_2290TETH39_2114TETH39_2289
TDEN326298 TMDEN_0526TMDEN_1553TMDEN_1923
TDEN292415 TBD_2824TBD_2402TBD_0037TBD_2808
TCRU317025 TCR_2195TCR_1953TCR_0126TCR_2177
SWOL335541 SWOL_2572SWOL_2408SWOL_2571
STYP99287 STM3843STM3701STM3917STM3874
SSP94122 SHEWANA3_0005SHEWANA3_0053SHEWANA3_0408SHEWANA3_0002
SSP644076 SCH4B_3188SCH4B_3180SCH4B_3187SCH4B_3189
SSP387093 SUN_1569SUN_1927SUN_0206
SSP292414 TM1040_2857TM1040_2863TM1040_2865
SSON300269 SSO_3657SSO_3796SSO_3954SSO_3878
SSED425104 SSED_0001SSED_4468SSED_4111SSED_4497
SRUB309807 SRU_0056SRU_2234SRU_0060
SPRO399741 SPRO_0027SPRO_4816SPRO_0160SPRO_4908
SPEA398579 SPEA_4256SPEA_4215SPEA_0397SPEA_4251
SONE211586 SO_0003SO_0052SO_0405SO_4758
SMEL266834 SMC02788SMC02796SMC02798
SMED366394 SMED_3205SMED_3214SMED_3206SMED_3204
SLOI323850 SHEW_3865SHEW_3804SHEW_0337SHEW_3856
SLAC55218 SL1157_1078SL1157_1084SL1157_1086
SHIGELLA THDFSECBRHOGIDA
SHAL458817 SHAL_4310SHAL_0045SHAL_3894SHAL_4305
SGLO343509 SG2428SG2185SG2386SG2405
SFLE373384 SFV_3806SFV_3922SFV_3722SFV_3767
SFLE198214 AAN45201.1AAN45095.1AAN45293.1AAN45261.1
SENT454169 SEHA_C4177SEHA_C4026SEHA_C4246SEHA_C4207
SENT321314 SCH_3760SCH_3624SCH_3822SCH_3787
SENT295319 SPA3687SPA3553SPA3757SPA3713
SENT220341 STY3937STY4094STY3638STY3904
SENT209261 T3677T3818T3380T3645
SDYS300267 SDY_4189SDY_4042SDY_3966SDY_4007
SDEN318161 SDEN_3774SDEN_3696SDEN_0447SDEN_3763
SDEG203122 SDE_4013SDE_0497SDE_3656SDE_4012
SBOY300268 SBO_3670SBO_3615SBO_3793SBO_3746
SBAL402882 SHEW185_4378SHEW185_0045SHEW185_3953SHEW185_4376
SBAL399599 SBAL195_4520SBAL195_0049SBAL195_4071SBAL195_4518
SAUR93062 SACOL2738SACOL2113SACOL2737
SAUR359787 SAURJH1_2791SAURJH1_2195SAURJH1_2790
SAUR359786 SAURJH9_2734SAURJH9_2157SAURJH9_2733
SAUR282458 SAR2798SAR2209SAR2797
SAUR273036 SAB2588CSAB2005CSAB2587C
SAUR196620 MW2630MW2045MW2629
SAUR158879 SA2501SA1923SA2500
SAUR158878 SAV2712SAV2121SAV2711
SACI56780 SYN_01016SYN_00014SYN_01798
RSPH349102 RSPH17025_2674RSPH17025_2668RSPH17025_2666
RSPH349101 RSPH17029_2891RSPH17029_2898RSPH17029_2892RSPH17029_2890
RSPH272943 RSP_1237RSP_1231RSP_1229
RSOL267608 RSC0005RSC0356RSC1187RSC3328
RRUB269796 RRU_A3624RRU_A3610RRU_A3619RRU_A3625
RRIC452659 RRIOWA_0130RRIOWA_0830RRIOWA_0109
RRIC392021 A1G_00615A1G_03955A1G_00530
RPOM246200 SPO_3895SPO_3888SPO_3894SPO_0001
RPAL316058 RPB_0399RPB_0393RPB_0391
RPAL316057 RPD_0429RPD_0422RPD_0428RPD_0430
RPAL316056 RPC_0291RPC_0298RPC_0292
RPAL258594 RPA0295RPA0302RPA0296RPA0294
RMET266264 RMET_3610RMET_0254RMET_2135RMET_3506
RMAS416276 RMA_0108RMA_0706RMA_0091
RLEG216596 RL4739RL0006RL4740RL4738
RFER338969 RFER_4241RFER_1312RFER_2899RFER_0049
RFEL315456 RF_1214RF_0055RF_0765RF_0119
REUT381666 H16_A0103H16_A0335H16_A2395H16_A3648
REUT264198 REUT_A3456REUT_A0307REUT_A2118REUT_A3357
RETL347834 RHE_CH04123RHE_CH00006RHE_CH04124RHE_CH04122
RDEN375451 RD1_0433RD1_0441RD1_0434RD1_0432
RCON272944 RC0100RC0759RC0084
RCAS383372 RCAS_2889RCAS_3710RCAS_2896
RCAN293613 A1E_04855A1E_00335A1E_02735A1E_00265
RBEL391896 A1I_00195A1I_00385A1I_04790A1I_00790
RBEL336407 RBE_0037RBE_1296RBE_0737
RAKA293614 A1C_00545A1C_03775A1C_00455
PTHE370438 PTH_2917PTH_2835PTH_2916
PSYR223283 PSPTO_5611PSPTO_5324PSPTO_5242PSPTO_5610
PSYR205918 PSYR_5133PSYR_4882PSYR_0301PSYR_5132
PSTU379731 PST_4210PST_4077PST_0543PST_4202
PSP56811 PSYCPRWF_2387PSYCPRWF_0807PSYCPRWF_2310PSYCPRWF_1781
PSP312153 PNUC_2084PNUC_1945PNUC_1308PNUC_0015
PSP296591 BPRO_4904BPRO_0889BPRO_2262BPRO_0073
PPUT76869 PPUTGB1_5443PPUTGB1_5104PPUTGB1_5275PPUTGB1_5442
PPUT351746 PPUT_5308PPUT_4926PPUT_5123PPUT_5306
PPUT160488 PP_0005PP_5053PP_5214PP_0004
PPRO298386 PBPRA0002PBPRA0226PBPRA3540PBPRA3615
PNAP365044 PNAP_4112PNAP_0930PNAP_2196PNAP_0063
PMUL272843 PM1166PM1432PM1920PM1485
PMEN399739 PMEN_4619PMEN_4243PMEN_0309PMEN_4618
PLUM243265 PLU4905PLU4839PLU4663PLU0049
PING357804 PING_3612PING_3208PING_3189PING_3741
PHAL326442 PSHAA3021PSHAA0369PSHAA0112PSHAA3019
PFLU220664 PFL_6229PFL_0374PFL_5981PFL_6226
PFLU216595 PFLU6133PFLU0340PFLU5900PFLU6129
PFLU205922 PFL_5742PFL_0336PFL_5456PFL_5741
PENT384676 PSEEN5555PSEEN0383PSEEN5331PSEEN5554
PCRY335284 PCRYO_2472PCRYO_1738PCRYO_2293PCRYO_1152
PCAR338963 PCAR_3142PCAR_2695PCAR_3141
PATL342610 PATL_4310PATL_3614PATL_4223PATL_4306
PARC259536 PSYC_2143PSYC_1556PSYC_1990PSYC_1240
PAER208964 PA5567PA5128PA5239PA5565
PAER208963 PA14_73400PA14_67720PA14_69190PA14_73370
OTSU357244 OTBS_2149OTBS_2155OTBS_1012
OIHE221109 OB3491OB3001OB3490
OCAR504832 OCAR_4372OCAR_4389OCAR_4382OCAR_4370
OANT439375 OANT_0858OANT_0848OANT_0856OANT_0859
NWIN323098 NWI_0106NWI_0100NWI_0097
NSP387092 NIS_0883NIS_1455NIS_1587
NSEN222891 NSE_0717NSE_0359NSE_0067
NOCE323261 NOC_3086NOC_0034NOC_2592NOC_3085
NMUL323848 NMUL_A2775NMUL_A1124NMUL_A2085NMUL_A2770
NMEN374833 NMCC_0220NMCC_0437NMCC_0565NMCC_1957
NMEN272831 NMC1962NMC0432NMC0560NMC0184
NMEN122587 NMA0454NMA0674NMA0825NMA0074
NMEN122586 NMB_1987NMB_1789NMB_0617NMB_0193
NGON242231 NGO2107NGO0116NGO0199NGO1788
NEUT335283 NEUT_2155NEUT_0658NEUT_2479NEUT_2437
NEUR228410 NE0386NE2210NE1035NE2476
NARO279238 SARO_0137SARO_0586SARO_0120
MTHE264732 MOTH_2519MOTH_2402MOTH_2518
MSUC221988 MS0480MS2214MS1837MS2354
MSP400668 MMWYL1_4484MMWYL1_0715MMWYL1_3991MMWYL1_4473
MSP266779 MESO_3472MESO_3483MESO_3474
MPET420662 MPE_A3824MPE_A0716MPE_A1282MPE_A3787
MMAR394221 MMAR10_2964MMAR10_2979MMAR10_2970MMAR10_2963
MMAG342108 AMB4544AMB4553AMB0002
MLOT266835 MLL4483MLL4541MLL4485MLL4482
MFLA265072 MFLA_2757MFLA_2185MFLA_2290MFLA_2755
MEXT419610 MEXT_1580MEXT_1559MEXT_1563MEXT_1583
MCAP243233 MCA_3038MCA_2537MCA_0056MCA_0001
MAQU351348 MAQU_3894MAQU_3164MAQU_0481MAQU_3886
LWEL386043 LWE2746LWE2501LWE2745
LPNE400673 LPC_3317LPC_1773LPC_3240LPC_3175
LPNE297246 LPP3073LPP2256LPP3002LPP2948
LPNE297245 LPL2929LPL2227LPL2863LPL2802
LPNE272624 LPG3001LPG2308LPG2934LPG2889
LMON265669 LMOF2365_2802LMOF2365_2523LMOF2365_2801
LMON169963 LMO2811LMO2551LMO2810
LINT363253 LI1072LI0264LI0946
LINT267671 LIC_10159LIC_12636LIC_13495
LINT189518 LA0180LA1021LA4358
LINN272626 LIN2943LIN2696LIN2942
LCHO395495 LCHO_4384LCHO_3813LCHO_2806LCHO_4196
LBOR355277 LBJ_0149LBJ_0728LBJ_0001
LBOR355276 LBL_2934LBL_2351LBL_0001
KPNE272620 GKPORF_B3459GKPORF_B3315GKPORF_B3628GKPORF_B3488
JSP375286 MMA_3693MMA_3219MMA_0622MMA_3639
JSP290400 JANN_0193JANN_0198JANN_0200
ILOI283942 IL2636IL0235IL2361IL2630
HSOM228400 HSM_2017HSM_0022HSM_0040HSM_1858
HSOM205914 HS_0132HS_0156HS_0173HS_1705
HNEP81032 HNE_3564HNE_0006HNE_3565HNE_3563
HINF71421 HI_1002HI_0743HI_0295HI_0582
HINF374930 CGSHIEE_06965CGSHIEE_08390CGSHIEE_01580CGSHIEE_00050
HINF281310 NTHI1178NTHI0900NTHI0405NTHI0744
HHAL349124 HHAL_1231HHAL_1213HHAL_2055HHAL_0002
HDUC233412 HD_0039HD_0661HD_0895HD_0001
HCHE349521 HCH_07086HCH_01356HCH_00285HCH_07083
HARS204773 HEAR3468HEAR2972HEAR0705HEAR3418
GURA351605 GURA_4428GURA_4065GURA_4427
GTHE420246 GTNG_3440GTNG_3327GTNG_3439
GSUL243231 GSU_3465GSU_3108GSU_3464
GOXY290633 GOX1066GOX1885GOX1070
GMET269799 GMET_3560GMET_0376GMET_3559
GKAU235909 GK3494GK3382GK3493
GFOR411154 GFO_1916GFO_0422GFO_3299
GBET391165 GBCGDNIH1_0012GBCGDNIH1_2336GBCGDNIH1_0059
FTUL458234 FTA_1243FTA_0311FTA_0645FTA_0780
FTUL418136 FTW_0557FTW_0791FTW_0451FTW_1252
FTUL401614 FTN_1298FTN_1510FTN_1416FTN_1182
FTUL393115 FTF1283FTF1500FTF1446FTF1205
FTUL393011 FTH_1152FTH_0293FTH_0611FTH_0741
FTUL351581 FTL_1177FTL_0293FTL_0610FTL_0739
FRANT TRMESECB2RHOGIDA
FPHI484022 FPHI_1382FPHI_1132FPHI_1271FPHI_0099
FJOH376686 FJOH_2707FJOH_4662FJOH_1003
ESP42895 ENT638_4148ENT638_0126ENT638_4003ENT638_4123
ELIT314225 ELI_13050ELI_10500ELI_13015
EFER585054 EFER_4003EFER_3603EFER_3721EFER_4040
ECOO157 THDFSECBRHOGIDA
ECOL83334 ECS4641ECS4487ECS4716ECS4683
ECOL585397 ECED1_4398ECED1_4295ECED1_4468ECED1_4431
ECOL585057 ECIAI39_4311ECIAI39_4130ECIAI39_3005ECIAI39_4345
ECOL585056 ECUMN_4238ECUMN_4126ECUMN_4307ECUMN_4271
ECOL585055 EC55989_4177EC55989_4076EC55989_4254EC55989_4216
ECOL585035 ECS88_4130ECS88_4026ECS88_4205ECS88_4163
ECOL585034 ECIAI1_3886ECIAI1_3782ECIAI1_3969ECIAI1_3925
ECOL481805 ECOLC_4288ECOLC_0099ECOLC_4220ECOLC_4253
ECOL469008 ECBD_4326ECBD_0116ECBD_4257ECBD_4291
ECOL439855 ECSMS35_4073ECSMS35_3946ECSMS35_4146ECSMS35_4109
ECOL413997 ECB_03590ECB_03467ECB_03661ECB_03625
ECOL409438 ECSE_3992ECSE_3891ECSE_4065ECSE_4031
ECOL405955 APECO1_2753APECO1_2846APECO1_2691APECO1_2722
ECOL364106 UTI89_C4259UTI89_C4151UTI89_C4338UTI89_C4296
ECOL362663 ECP_3907ECP_3710ECP_3974ECP_3940
ECOL331111 ECE24377A_4216ECE24377A_4113ECE24377A_4293ECE24377A_4257
ECOL316407 ECK3699:JW3684:B3706ECK3599:JW3584:B3609ECK3775:JW3756:B3783ECK3734:JW3719:B3741
ECOL199310 C4630C4432C4702C4669
ECHA205920 ECH_0060ECH_0233ECH_0994
ECAR218491 ECA4446ECA0172ECA4211ECA4521
ECAN269484 ECAJ_0777ECAJ_0803ECAJ_0653
DVUL882 DVU_1079DVU_1571DVU_1828
DSHI398580 DSHI_3454DSHI_3447DSHI_3453DSHI_3455
DRED349161 DRED_3324DRED_3174DRED_3323
DPSY177439 DP0857DP0115DP2728DP0852
DNOD246195 DNO_0948DNO_0292DNO_0736DNO_0672
DDES207559 DDE_2392DDE_2130DDE_1809
DARO159087 DARO_4200DARO_0613DARO_2998DARO_4103
CVIO243365 CV_4403CV_1127CV_1585CV_0661
CVES412965 COSY_0916COSY_0440COSY_0075
CTET212717 CTC_00098CTC_00296CTC_00099
CSP78 CAUL_5023CAUL_5037CAUL_5019CAUL_5024
CSP501479 CSE45_3430CSE45_3423CSE45_3421
CSAL290398 CSAL_3315CSAL_0048CSAL_0584CSAL_3295
CRUT413404 RMAG_1014RMAG_0477RMAG_0068
CPSY167879 CPS_5049CPS_4388CPS_0176CPS_5047
CPRO264201 PC0022PC0221PC1839
CPER289380 CPR_2669CPR_2181CPR_2668
CPER195102 CPE2655CPE2207CPE2654
CPEL335992 SAR11_0350SAR11_0348SAR11_0351
CMUR243161 TC_0070TC_0778TC_0785
CJAP155077 CJA_3822CJA_3557CJA_0361CJA_3820
CHYD246194 CHY_0006CHY_0130CHY_0007
CHUT269798 CHU_2030CHU_3603CHU_3502
CFEL264202 CF0086CF0876CF0883
CDES477974 DAUD_2233DAUD_2173DAUD_2232
CCAV227941 CCA_00928CCA_00130CCA_00123
CBUR434922 COXBU7E912_0199COXBU7E912_0465COXBU7E912_2184COXBU7E912_0198
CBUR360115 COXBURSA331_A2124COXBURSA331_A1702COXBURSA331_A2210COXBURSA331_A2125
CBUR227377 CBU_1922CBU_1519CBU_2086CBU_1924
CBOT508765 CLL_A3600CLL_A0477CLL_A3599
CBLO291272 BPEN_011BPEN_627BPEN_607BPEN_001
CBLO203907 BFL011BFL586BFL001
CAULO CC3756CC3742CC3760CC3755
CACE272562 CAC3734CAC2889CAC3733
CABO218497 CAB897CAB129CAB122
BWEI315730 BCERKBAB4_5277BCERKBAB4_5130BCERKBAB4_5276
BVIE269482 BCEP1808_3308BCEP1808_2954BCEP1808_1756BCEP1808_0102
BTRI382640 BT_2693BT_0110BT_2694BT_2692
BTHU412694 BALH_4991BALH_4830BALH_4990
BTHU281309 BT9727_5165BT9727_5016BT9727_5164
BTHA271848 BTH_I3233BTH_I0419BTH_I2217BTH_I3320
BSUI470137 BSUIS_A1903BSUIS_A1913BSUIS_A1905BSUIS_A1902
BSUI204722 BR_2062BR_2072BR_2064BR_2061
BSUB BSU41020BSU37080BSU41010
BSP376 BRADO0203BRADO0197BRADO0195
BSP36773 BCEP18194_A6518BCEP18194_A6183BCEP18194_A5130BCEP18194_A3275
BSP107806 BU016BU053BU596BU001
BQUI283165 BQ13570BQ00950BQ13580BQ13560
BPSE320373 BURPS668_0096BURPS668_0481BURPS668_2210BURPS668_3982
BPSE320372 BURPS1710B_A0322BURPS1710B_A0706BURPS1710B_A2578BURPS1710B_A0196
BPSE272560 BPSL0080BPSL0446BPSL1495BPSL3408
BPET94624 BPET5001BPET4697BPET1970BPET4977
BPER257313 BP3863BP0604BP1262BP0001
BPAR257311 BPP4417BPP0292BPP1877BPP0001
BOVI236 GBOORF2058GBOORF2068GBOORF2060GBOORF2057
BMEL359391 BAB1_2063BAB1_2073BAB1_2065BAB1_2062
BMEL224914 BMEI0006BMEI2055BMEI0003BMEI0007
BMAL320389 BMA10247_3547BMA10247_2841BMA10247_1126BMA10247_3003
BMAL320388 BMASAVP1_A2842BMASAVP1_A0178BMASAVP1_A1855BMASAVP1_A3367
BMAL243160 BMA_3395BMA_3205BMA_1365BMA_2944
BLIC279010 BL00110BL03973BL00109
BJAP224911 BLL0634BLL0641BLL0635BLL0633
BHEN283166 BH16690BH01020BH16700BH16680
BHAL272558 BH4062BH3781BH4061
BCLA66692 ABC4117ABC3879ABC4116
BCIC186490 BCI_0137BCI_0188BCI_0148
BCER572264 BCA_5639BCA_5481BCA_5638
BCER405917 BCE_5635BCE_5460BCE_5634
BCER288681 BCE33L5181BCE33L5032BCE33L5180
BCER226900 BC_5486BC_5332BC_5485
BCEN331272 BCEN2424_3161BCEN2424_2854BCEN2424_1829BCEN2424_0093
BCEN331271 BCEN_2547BCEN_2240BCEN_6250BCEN_2962
BCAN483179 BCAN_A2108BCAN_A2118BCAN_A2110BCAN_A2107
BBRO257310 BB5005BB0295BB3231BB0001
BBAC360095 BARBAKC583_0010BARBAKC583_1296BARBAKC583_0009BARBAKC583_0011
BAPH372461 BCC_008BCC_385BCC_001
BAPH198804 BUSG017BUSG050BUSG572BUSG001
BANT592021 BAA_5768BAA_5602BAA_5767
BANT568206 BAMEG_5785BAMEG_5621BAMEG_5784
BANT261594 GBAA5734GBAA5575GBAA5733
BANT260799 BAS5337BAS5181BAS5336
BAMY326423 RBAM_038120RBAM_034240RBAM_038110
BAMB398577 BAMMC406_3097BAMMC406_2771BAMMC406_1740BAMMC406_0094
BAMB339670 BAMB_3213BAMB_2909BAMB_1767BAMB_0084
BABO262698 BRUAB1_2037BRUAB1_2047BRUAB1_2039BRUAB1_2036
ASP76114 EBA2841EBA1056EBA4743EBA2915
ASP62977 ACIAD3680ACIAD3122ACIAD3038ACIAD2440
ASP62928 AZO3988AZO2812AZO1029AZO0141
ASP232721 AJS_4138AJS_3502AJS_2358AJS_0026
ASAL382245 ASA_4381ASA_4102ASA_4293ASA_4361
APLE434271 APJL_1515APJL_1535APJL_0253APJL_1688
APLE416269 APL_1490APL_1509APL_0247APL_1655
AORE350688 CLOS_2872CLOS_2591CLOS_2871
AMET293826 AMET_4797AMET_0323AMET_4796
AHYD196024 AHA_4280AHA_0295AHA_0099AHA_4273
AFER243159 AFE_2993AFE_0968AFE_2382AFE_3118
AEHR187272 MLG_2881MLG_2571MLG_0367MLG_2880
ACRY349163 ACRY_2407ACRY_1788ACRY_1226
ACAU438753 AZC_4708AZC_4672AZC_4715AZC_4709
ABOR393595 ABO_2752ABO_2272ABO_2463ABO_2737
ABAU360910 BAV3419BAV0240BAV2380BAV0001
ABAC204669 ACID345_4729ACID345_3229ACID345_0080
AAVE397945 AAVE_4791AAVE_3855AAVE_2638AAVE_0051
AAEO224324 AQ_871AQ_873AQ_761


Organism features enriched in list (features available for 314 out of the 333 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00079133692
Arrangment:Singles 0.0089936142286
Disease:None 0.00826462358
Endospores:No 1.170e-2159211
GC_Content_Range4:0-40 7.441e-787213
GC_Content_Range4:40-60 0.0008362138224
GC_Content_Range4:60-100 0.008536389145
GC_Content_Range7:0-30 7.541e-61147
GC_Content_Range7:30-40 0.003532476166
GC_Content_Range7:50-60 0.000012377107
GC_Content_Range7:60-70 0.000299189134
Genome_Size_Range5:0-2 2.809e-1542155
Genome_Size_Range5:4-6 3.705e-15142184
Genome_Size_Range9:0-1 0.0018654727
Genome_Size_Range9:1-2 4.880e-1235128
Genome_Size_Range9:2-3 0.004776753120
Genome_Size_Range9:4-5 5.881e-67196
Genome_Size_Range9:5-6 1.124e-87188
Genome_Size_Range9:6-8 0.00517312838
Gram_Stain:Gram_Neg 8.086e-31247333
Gram_Stain:Gram_Pos 1.878e-1441150
Habitat:Multiple 0.0027800110178
Habitat:Specialized 0.00044671753
Motility:No 2.042e-1540151
Motility:Yes 8.103e-8175267
Optimal_temp.:- 0.0008796156257
Optimal_temp.:25-30 0.00084771719
Optimal_temp.:35-37 0.00028551313
Optimal_temp.:37 0.000446942106
Oxygen_Req:Aerobic 0.0062481112185
Oxygen_Req:Anaerobic 2.072e-928102
Oxygen_Req:Facultative 0.0005601126201
Pathogenic_in:Animal 8.758e-85566
Pathogenic_in:No 0.0065037109226
Salinity:Non-halophilic 0.005025846106
Shape:Coccobacillus 0.00101901111
Shape:Coccus 1.678e-82182
Shape:Rod 9.769e-20240347
Shape:Sphere 0.0000773219
Shape:Spiral 0.00187251034
Temp._range:Hyperthermophilic 0.0000394323
Temp._range:Mesophilic 0.0080360265473
Temp._range:Psychrophilic 0.003614599
Temp._range:Thermophilic 0.0000953835



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 174
Effective number of orgs (counting one per cluster within 468 clusters): 156

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SMAR399550 ncbi Staphylothermus marinus F10
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SELO269084 ncbi Synechococcus elongatus PCC 63011
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SARE391037 ncbi Salinispora arenicola CNS-2050
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RALB246199 Ruminococcus albus 80
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
NSP35761 Nocardioides sp.0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FMAG334413 ncbi Finegoldia magna ATCC 293281
FALN326424 ncbi Frankia alni ACN14a0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R11
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4110
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1351
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110171
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  EG10997   EG10937   EG10845   EG10375   
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0931
TTHE262724 TT_C0562
TROS309801 TRD_0337
TPEN368408
TPAL243276 TP_0254
TKOD69014
TFUS269800 TFU_2421
TERY203124 TERY_4774
TELO197221
TDEN243275 TDE_1503
TACI273075
STRO369723
STOK273063
SSP84588 SYNW2322OR2547
SSP64471 GSYN2853
SSP321332 CYB_2687
SSP321327 CYA_2126
SSP1148
SSP1131 SYNCC9605_2453
SSOL273057
SSAP342451 SSP2443
SPYO370553 MGAS2096_SPY1869
SMAR399550
SERY405948
SELO269084 SYC0039_C
SCO
SAVE227882 SAV2915
SARE391037
SACI330779
RXYL266117 RXYL_1655
RSP101510
RSAL288705
RALB246199
PTOR263820
PRUM264731 GFRORF0900
PMAR93060
PMAR74547 PMT2074
PMAR74546
PMAR59920 PMN2A_1556
PMAR167555 NATL1_02641
PMAR167546
PMAR167542
PMAR167540
PMAR167539 PRO_0214
PMAR146891
PLUT319225 PLUT_1756
PISL384616
PINT246198 PIN_0393
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
NSP35761
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LMES203120
LGAS324831 LGAS_1894
LBRE387344 LVIS_2309
KRAD266940
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0497
HPYL357544 HPAG1_0528
HPY HP0550
HMUK485914
HMAR272569
HHEP235279 HH_0023
HBUT415426
HACI382638 HAC_0875
GVIO251221 GLR2452
FSUC59374 FSU1162
FSP1855
FSP106370
FNUC190304 FN1723
FMAG334413 FMG_1623
FALN326424
DSP255470
DSP216389
DRAD243230 DR_1016
DOLE96561 DOLE_0470
DGEO319795 DGEO_0478
DETH243164
CSUL444179 SMGWSS_012
CPHY357809
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CJEI306537
CGLU196627
CEFF196164
CDIP257309
BXEN266265
BTUR314724 BT0230
BTHE226186 BT_1595
BLON206672
BHER314723 BH0230
BGAR290434 BG0233
BFRA295405 BF3213
BFRA272559 BF3052
BBUR224326 BB_0230
BAFZ390236 BAPKO_0239
AYEL322098
AURANTIMONAS
ASP1667
APER272557
ANAE240017
AMAR329726 AM1_1728
ALAI441768 ACL_1403
AFUL224325
ADEH290397 ADEH_0690
ACEL351607 ACEL_0633
AAUR290340


Organism features enriched in list (features available for 162 out of the 174 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.000206289
Arrangment:Chains 2.055e-7792
Arrangment:Filaments 0.0054386710
Arrangment:Pairs 0.000627718112
Arrangment:Singles 2.386e-6104286
Disease:None 0.00154572658
Endospores:No 8.984e-1396211
GC_Content_Range7:0-30 0.00436932147
GC_Content_Range7:70-100 5.926e-71111
Genome_Size_Range5:0-2 1.973e-768155
Genome_Size_Range5:4-6 1.231e-726184
Genome_Size_Range9:0-1 0.00001551827
Genome_Size_Range9:1-2 0.000597250128
Genome_Size_Range9:4-5 0.00018201396
Genome_Size_Range9:5-6 0.00097391388
Gram_Stain:Gram_Neg 1.262e-2043333
Habitat:Aquatic 0.00002174291
Habitat:Multiple 1.927e-725178
Habitat:Specialized 0.00010372753
Motility:No 1.673e-971151
Motility:Yes 6.141e-651267
Optimal_temp.:- 0.001177656257
Optimal_temp.:37 0.007392039106
Optimal_temp.:85 0.005803144
Oxygen_Req:Anaerobic 2.299e-648102
Oxygen_Req:Facultative 3.450e-731201
Pathogenic_in:Animal 0.0002557766
Pathogenic_in:Human 6.281e-637213
Pathogenic_in:No 0.000109282226
Shape:Branched_filament 0.005803144
Shape:Irregular_coccus 1.862e-101717
Shape:Oval 0.001583655
Shape:Rod 2.568e-1456347
Shape:Sphere 1.761e-81719
Temp._range:Hyperthermophilic 3.154e-61723
Temp._range:Mesophilic 0.0007523118473
Temp._range:Thermophilic 0.00042601935



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002590.6353
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862510.6337
PWY-5918 (heme biosynthesis I)2722420.6269
PWY-1269 (CMP-KDO biosynthesis I)3252690.6138
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912470.5899
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962480.5786
GLYCOCAT-PWY (glycogen degradation I)2462190.5761
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482720.5573
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902410.5548
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262600.5525
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2252020.5476
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181970.5430
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951810.5327
PWY-5669 (phosphatidylethanolamine biosynthesis I)4163000.5304
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831720.5241
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982900.5176
PWY-5913 (TCA cycle variation IV)3012380.4966
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552120.4954
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911730.4949
DAPLYSINESYN-PWY (lysine biosynthesis I)3422590.4928
TYRFUMCAT-PWY (tyrosine degradation I)1841680.4913
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491430.4780
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392550.4768
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911680.4600
PWY-4041 (γ-glutamyl cycle)2792200.4586
PWY0-501 (lipoate biosynthesis and incorporation I)3852740.4518
KDOSYN-PWY (KDO transfer to lipid IVA I)1801570.4316
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791560.4290
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761530.4212
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222850.4091
PWY-5028 (histidine degradation II)1301210.4079
PWY-5188 (tetrapyrrole biosynthesis I)4392920.4045
REDCITCYC (TCA cycle variation II)1741490.4016



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10937   EG10845   EG10375   
EG109970.9988120.9990980.999899
EG109370.9988120.999044
EG108450.999288
EG10375



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PAIRWISE BLAST SCORES:

  EG10997   EG10937   EG10845   EG10375   
EG109970.0f0---
EG10937-0.0f0--
EG10845--0.0f0-
EG10375---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-7609 (complex involved in modification of tRNA) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9990 EG10375 (mnmG) EG10375-MONOMER (protein involved in a tRNA modification pathway)
   *in cand* 0.9995 0.9988 EG10997 (mnmE) EG10997-MONOMER (GTP-binding protein with a role in modification of tRNA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9988 EG10845 (rho) EG10845-MONOMER (transcription termination factor Rho monomer;  polarity suppressor)
   *in cand* 0.9992 0.9988 EG10937 (secB) SECB (SecB)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10997 (centered at EG10997)
EG10937 (centered at EG10937)
EG10845 (centered at EG10845)
EG10375 (centered at EG10375)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10997   EG10937   EG10845   EG10375   
412/623268/623410/623417/623
AAEO224324:0:Tyes75-760
AAVE397945:0:Tyes4656373425440
ABAC204669:0:Tyes4695-31730
ABAU360910:0:Tyes343224323900
ABOR393595:0:Tyes4820192467
ABUT367737:0:Tyes--01917
ACAU438753:0:Tyes3604337
ACEL351607:0:Tyes--0-
ACRY349163:8:Tyes11935650-
ADEH290397:0:Tyes--0-
AEHR187272:0:Tyes2499218902498
AFER243159:0:Tyes1999013962122
AHYD196024:0:Tyes402718604020
ALAI441768:0:Tyes0---
AMAR234826:0:Tyes-0645-
AMAR329726:9:Tyes0---
AMET293826:0:Tyes4431-04430
AORE350688:0:Tyes279-0278
APHA212042:0:Tyes-0922-
APLE416269:0:Tyes1261128001445
APLE434271:0:Tno1254127401447
ASAL382245:5:Tyes2710186251
ASP232721:2:Tyes4019337622670
ASP62928:0:Tyes390927229110
ASP62977:0:Tyes11306205450
ASP76114:2:Tyes1046021621096
AVAR240292:3:Tyes0--1555
BABO262698:1:Tno11130
BAFZ390236:2:Fyes--0-
BAMB339670:3:Tno3208290217330
BAMB398577:3:Tno3045271916700
BAMY326423:0:Tyes388-0387
BANT260799:0:Tno158-0157
BANT261594:2:Tno146-0145
BANT568206:2:Tyes158-0157
BANT592021:2:Tno160-0159
BAPH198804:0:Tyes16535690
BAPH372461:0:Tyes7-3800
BBAC264462:0:Tyes--03553
BBAC360095:0:Tyes1120102
BBRO257310:0:Tyes505229432500
BBUR224326:21:Fno--0-
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ZMOB264203:0:Tyes-0376-



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