CANDIDATE ID: 1025

CANDIDATE ID: 1025

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9936150e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7713 (yheM) (b3344)
   Products of gene:
     - G7713-MONOMER (sulfur transfer protein complex, TusC subunit)
     - CPLX-3942 (sulfur transfer protein complex)

- EG10911 (rpsL) (b3342)
   Products of gene:
     - EG10911-MONOMER (30S ribosomal subunit protein S12)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10906 (rpsG) (b3341)
   Products of gene:
     - EG10906-MONOMER (30S ribosomal subunit protein S7)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10360 (fusA) (b3340)
   Products of gene:
     - EG10360-MONOMER (elongation factor G)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 259
Effective number of orgs (counting one per cluster within 468 clusters): 184

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula13
XFAS160492 ncbi Xylella fastidiosa 9a5c3
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
WSUC273121 ncbi Wolinella succinogenes DSM 17403
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-23
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79013
TSP1755 Thermoanaerobacter sp.3
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332233
TERY203124 ncbi Trichodesmium erythraeum IMS1013
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12513
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-23
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148633
SSP94122 ncbi Shewanella sp. ANA-34
SSP387093 ncbi Sulfurovum sp. NBC37-13
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMED366394 ncbi Sinorhizobium medicae WSM4193
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-403
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SALA317655 ncbi Sphingopyxis alaskensis RB22563
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99413
RSOL267608 ncbi Ralstonia solanacearum GMI10003
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332093
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RPAL316057 ncbi Rhodopseudomonas palustris BisB53
RMET266264 ncbi Ralstonia metallidurans CH343
RFER338969 ncbi Rhodoferax ferrireducens T1183
REUT381666 ncbi Ralstonia eutropha H163
REUT264198 ncbi Ralstonia eutropha JMP1343
PTHE370438 ncbi Pelotomaculum thermopropionicum SI3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15013
PSP56811 Psychrobacter sp.3
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-13
PSP296591 ncbi Polaromonas sp. JS6663
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ23
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUT319225 ncbi Chlorobium luteolum DSM 2733
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1253
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K53
PCAR338963 ncbi Pelobacter carbinolicus DSM 23803
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-43
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OCAR504832 ncbi Oligotropha carboxidovorans OM53
NSP387092 ncbi Nitratiruptor sp. SB155-23
NOCE323261 ncbi Nitrosococcus oceani ATCC 197073
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NMEN374833 ncbi Neisseria meningitidis 0534423
NMEN272831 ncbi Neisseria meningitidis FAM183
NMEN122587 ncbi Neisseria meningitidis Z24913
NMEN122586 ncbi Neisseria meningitidis MC583
NGON242231 ncbi Neisseria gonorrhoeae FA 10903
NFAR247156 ncbi Nocardia farcinica IFM 101523
NEUT335283 ncbi Nitrosomonas eutropha C913
NEUR228410 ncbi Nitrosomonas europaea ATCC 197183
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP400668 ncbi Marinomonas sp. MWYL13
MSP266779 ncbi Chelativorans sp. BNC13
MPET420662 ncbi Methylibium petroleiphilum PM13
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MFLA265072 ncbi Methylobacillus flagellatus KT3
MCAP243233 ncbi Methylococcus capsulatus Bath3
MAQU351348 ncbi Marinobacter aquaeolei VT83
LXYL281090 ncbi Leifsonia xyli xyli CTCB073
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-003
LCHO395495 ncbi Leptothrix cholodnii SP-63
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille3
ILOI283942 ncbi Idiomarina loihiensis L2TR3
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HPYL85963 ncbi Helicobacter pylori J993
HPYL357544 ncbi Helicobacter pylori HPAG13
HPY ncbi Helicobacter pylori 266953
HMOD498761 ncbi Heliobacterium modesticaldum Ice13
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHEP235279 ncbi Helicobacter hepaticus ATCC 514493
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans3
HACI382638 ncbi Helicobacter acinonychis Sheeba3
GURA351605 ncbi Geobacter uraniireducens Rf43
GSUL243231 ncbi Geobacter sulfurreducens PCA3
GMET269799 ncbi Geobacter metallireducens GS-153
GKAU235909 ncbi Geobacillus kaustophilus HTA4263
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-003
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL401614 ncbi Francisella novicida U1123
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL393011 ncbi Francisella tularensis holarctica OSU183
FTUL351581 Francisella tularensis holarctica FSC2003
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25943
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5833
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough3
DRED349161 ncbi Desulfotomaculum reducens MI-13
DNOD246195 ncbi Dichelobacter nodosus VCS1703A3
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G203
DARO159087 ncbi Dechloromonas aromatica RCB3
CVIO243365 ncbi Chromobacterium violaceum ATCC 124723
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CTET212717 ncbi Clostridium tetani E883
CTEP194439 ncbi Chlorobium tepidum TLS3
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPER289380 ncbi Clostridium perfringens SM1013
CPER195103 ncbi Clostridium perfringens ATCC 131243
CPER195102 ncbi Clostridium perfringens 133
CNOV386415 ncbi Clostridium novyi NT3
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJEJ407148 ncbi Campylobacter jejuni jejuni 811163
CJEJ360109 ncbi Campylobacter jejuni doylei 269.973
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1763
CJEJ195099 ncbi Campylobacter jejuni RM12213
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111683
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3813
CFET360106 ncbi Campylobacter fetus fetus 82-403
CCUR360105 ncbi Campylobacter curvus 525.923
CCON360104 ncbi Campylobacter concisus 138263
CCHL340177 ncbi Chlorobium chlorochromatii CaD33
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3313
CBUR227377 ncbi Coxiella burnetii RSA 4933
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6573
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBOT498213 ncbi Clostridium botulinum B1 str. Okra3
CBOT441772 ncbi Clostridium botulinum F str. Langeland3
CBOT441771 ncbi Clostridium botulinum A str. Hall3
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193973
CBOT36826 Clostridium botulinum A3
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CACE272562 ncbi Clostridium acetobutylicum ATCC 8243
BVIE269482 ncbi Burkholderia vietnamiensis G43
BTHA271848 ncbi Burkholderia thailandensis E2643
BSP36773 Burkholderia sp.3
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)4
BPSE320373 ncbi Burkholderia pseudomallei 6683
BPSE320372 ncbi Burkholderia pseudomallei 1710b3
BPSE272560 ncbi Burkholderia pseudomallei K962433
BPET94624 Bordetella petrii3
BPER257313 ncbi Bordetella pertussis Tohama I3
BPAR257311 ncbi Bordetella parapertussis 128223
BMAL320389 ncbi Burkholderia mallei NCTC 102473
BMAL320388 ncbi Burkholderia mallei SAVP13
BMAL243160 ncbi Burkholderia mallei ATCC 233443
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BCIC186490 Candidatus Baumannia cicadellinicola4
BCEN331272 ncbi Burkholderia cenocepacia HI24243
BCEN331271 ncbi Burkholderia cenocepacia AU 10543
BBRO257310 ncbi Bordetella bronchiseptica RB503
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)4
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)4
BAMB398577 ncbi Burkholderia ambifaria MC40-63
BAMB339670 ncbi Burkholderia ambifaria AMMD3
ASP76114 ncbi Aromatoleum aromaticum EbN13
ASP62977 ncbi Acinetobacter sp. ADP13
ASP62928 ncbi Azoarcus sp. BH723
ASP232721 ncbi Acidovorax sp. JS423
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL033
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232703
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3
ABUT367737 ncbi Arcobacter butzleri RM40183
ABOR393595 ncbi Alcanivorax borkumensis SK23
ABAU360910 ncbi Bordetella avium 197N3
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453
AAVE397945 ncbi Acidovorax citrulli AAC00-13


Names of the homologs of the genes in the group in each of these orgs
  G7713   EG10911   EG10906   EG10360   
YPSE349747 YPSIP31758_3923YPSIP31758_3921YPSIP31758_3920YPSIP31758_3919
YPSE273123 YPTB3707YPTB3705YPTB3704YPTB3703
YPES386656 YPDSF_0123YPDSF_0125YPDSF_0126YPDSF_0127
YPES377628 YPN_3869YPN_3867YPN_3866YPN_3865
YPES360102 YPA_3274YPA_3272YPA_3271YPA_3270
YPES349746 YPANGOLA_A3680YPANGOLA_A3678YPANGOLA_A3677YPANGOLA_A3675
YPES214092 YPO0198YPO0200YPO0201YPO0202
YPES187410 Y3980Y3983Y3984Y3985
YENT393305 YE3932YE3930YE3929YE3928
XORY342109 XOO3392XOO3391XOO3390
XFAS405440 XFASM12_2194XFASM12_2193XFASM12_2192
XFAS183190 PD_1999PD_1998PD_1997
XFAS160492 XF2631XF2630XF2629
XCAM487884 XCC-B100_3464XCC-B100_3463XCC-B100_3462
XCAM314565 XC_3345XC_3344XC_3343
XCAM190485 XCC0890XCC0891XCC0892
XAXO190486 XAC0967XAC0968XAC0969
WSUC273121 WS0468WS0469WS0470
VVUL216895 VV1_1334VV1_1336VV1_1337VV1_1338
VVUL196600 VV3034VV3032VV3031VV3030
VPAR223926 VP2775VP2773VP2772VP2771
VFIS312309 VF0229VF0230VF0231VF0232
VEIS391735 VEIS_1259VEIS_1260VEIS_1261
VCHO345073 VC0395_A2769VC0395_A2771VC0395_A2772VC0395_A2773
VCHO VC0357VC0359VC0360VC0361
TTUR377629 TERTU_0886TERTU_0887TERTU_0888
TSP1755 TETH514_0862TETH514_0863TETH514_0864
TPSE340099 TETH39_0369TETH39_0370TETH39_0371
TERY203124 TERY_0473TERY_0474TERY_0475
TDEN326298 TMDEN_0355TMDEN_0356TMDEN_0357
TDEN292415 TBD_2482TBD_0400TBD_0401TBD_0402
TCRU317025 TCR_0290TCR_0291TCR_0292
STYP99287 STM3450STM3448STM3447STM3446
STHE292459 STH3080STH3079STH3078
SSP94122 SHEWANA3_2058SHEWANA3_0194SHEWANA3_0195SHEWANA3_0196
SSP387093 SUN_0133SUN_0134SUN_0135
SSON300269 SSO_3474SSO_3472SSO_3471SSO_3470
SSED425104 SSED_2134SSED_4322SSED_4321SSED_4320
SPRO399741 SPRO_4553SPRO_4551SPRO_4550SPRO_2537
SPEA398579 SPEA_2109SPEA_0179SPEA_0180SPEA_0181
SONE211586 SO_2377SO_0226SO_0227SO_0228
SMED366394 SMED_0981SMED_0982SMED_0983
SLOI323850 SHEW_2016SHEW_0153SHEW_0154SHEW_0155
SHIGELLA YHEMRPSLRPSGFUSA
SHAL458817 SHAL_2081SHAL_4139SHAL_4138SHAL_4137
SGLO343509 SG2288SG2286SG2285SG2284
SFLE373384 SFV_3349SFV_3347SFV_3346SFV_3345
SFLE198214 AAN44825.1AAN44823.1AAN44822.1AAN44821.1
SENT454169 SEHA_C3755SEHA_C3753SEHA_C3752SEHA_C3751
SENT321314 SCH_3384SCH_3382SCH_3381SCH_3380
SENT295319 SPA3316SPA3314SPA3313SPA3312
SENT220341 STY4348STY4350STY4351STY4352
SENT209261 T4055T4057T4058T4059
SDYS300267 SDY_3505SDY_3503SDY_3502SDY_3501
SDEN318161 SDEN_1807SDEN_0165SDEN_0166SDEN_0167
SDEG203122 SDE_0926SDE_0927SDE_0928
SBOY300268 SBO_3324SBO_3323SBO_3322SBO_3321
SBAL402882 SHEW185_2207SHEW185_0191SHEW185_0192SHEW185_0193
SBAL399599 SBAL195_2315SBAL195_0195SBAL195_0196SBAL195_0197
SALA317655 SALA_2823SALA_2822SALA_2821
RXYL266117 RXYL_2160RXYL_2159RXYL_2158
RSOL267608 RSC3024RSC3023RSP0804
RSAL288705 RSAL33209_2174RSAL33209_2173RSAL33209_2172
RRUB269796 RRU_A2693RRU_A2692RRU_A2691
RPAL316058 RPB_2290RPB_2291RPB_2292
RPAL316057 RPD_3189RPD_3188RPD_3187
RMET266264 RMET_3327RMET_3326RMET_3325
RFER338969 RFER_3800RFER_3799RFER_3798
REUT381666 H16_A3494H16_A3493H16_B0124
REUT264198 REUT_A3185REUT_A3184REUT_A3183
PTHE370438 PTH_0315PTH_0316PTH_0317
PSYR223283 PSPTO_3339PSPTO_0621PSPTO_0622PSPTO_0623
PSYR205918 PSYR_3169PSYR_4553PSYR_4552PSYR_4551
PSTU379731 PST_0779PST_0780PST_0781
PSP56811 PSYCPRWF_1863PSYCPRWF_1862PSYCPRWF_1861
PSP312153 PNUC_0048PNUC_0049PNUC_0050
PSP296591 BPRO_0251BPRO_0252BPRO_0253
PPUT76869 PPUTGB1_3599PPUTGB1_0479PPUTGB1_0480PPUTGB1_3684
PPUT351746 PPUT_1839PPUT_0482PPUT_0483PPUT_1753
PPUT160488 PP_3994PP_0449PP_0450PP_4111
PPRO298386 PBPRA0311PBPRA0313PBPRA0314PBPRA0315
PNAP365044 PNAP_0198PNAP_0199PNAP_0200
PMUL272843 PM1352PM1354PM1355PM1356
PMEN399739 PMEN_2378PMEN_3914PMEN_3913PMEN_3912
PLUT319225 PLUT_0041PLUT_0175PLUT_0177
PLUM243265 PLU0427PLU0429PLU0430PLU0431
PING357804 PING_3442PING_3440PING_3439PING_3438
PHAL326442 PSHAA0224PSHAA0225PSHAA0226
PFLU220664 PFL_3870PFL_5587PFL_5586PFL_5585
PFLU216595 PFLU3791PFLU5532PFLU5531PFLU5530
PFLU205922 PFL_3576PFL_5084PFL_5083PFL_5082
PENT384676 PSEEN2222PSEEN0484PSEEN0485PSEEN3478
PCRY335284 PCRYO_2187PCRYO_2186PCRYO_2185
PCAR338963 PCAR_0696PCAR_0697PCAR_0698
PATL342610 PATL_2453PATL_0600PATL_0601PATL_0602
PARC259536 PSYC_1897PSYC_1896PSYC_1895
PAER208964 PA2606PA4268PA4267PA4266
PAER208963 PA14_30390PA14_08790PA14_08810PA14_08820
OCAR504832 OCAR_5672OCAR_5673OCAR_5674
NSP387092 NIS_0270NIS_0271NIS_0272
NOCE323261 NOC_2329NOC_2328NOC_2327
NMUL323848 NMUL_A0762NMUL_A0763NMUL_A0764
NMEN374833 NMCC_2011NMCC_2010NMCC_2009
NMEN272831 NMC0125NMC0126NMC0127
NMEN122587 NMA0137NMA0136NMA0135
NMEN122586 NMB_0136NMB_0137NMB_0138
NGON242231 NGO1845NGO1844NGO1843
NFAR247156 NFA50780NFA50770NFA50760
NEUT335283 NEUT_0553NEUT_0554NEUT_0555
NEUR228410 NE2055NE2054NE2053
NARO279238 SARO_1244SARO_1245SARO_1246
MTHE264732 MOTH_2465MOTH_2464MOTH_2463
MSUC221988 MS0160MS0162MS0163MS0164
MSP400668 MMWYL1_4281MMWYL1_4280MMWYL1_4279
MSP266779 MESO_1683MESO_1682MESO_1681
MPET420662 MPE_A3448MPE_A3447MPE_A3446
MMAG342108 AMB3370AMB3135AMB3134AMB3133
MFLA265072 MFLA_0274MFLA_0275MFLA_0276
MCAP243233 MCA_2377MCA_2376MCA_2375
MAQU351348 MAQU_0714MAQU_0715MAQU_0716
LXYL281090 LXX20420LXX20410LXX20400
LINT363253 LI0942LI0943LI0944
LCHO395495 LCHO_3861LCHO_3862LCHO_3863
KPNE272620 GKPORF_B3069GKPORF_B3067GKPORF_B3066GKPORF_B3065
JSP375286 MMA_3416MMA_3415MMA_3414
ILOI283942 IL0347IL0348IL0349
HSOM228400 HSM_1796HSM_1809HSM_1808HSM_1807
HSOM205914 HS_1634HS_1647HS_1646HS_1645
HPYL85963 JHP1120JHP1119JHP1118
HPYL357544 HPAG1_1136HPAG1_1135HPAG1_1134
HPY HP1197HP1196HP1195
HMOD498761 HM1_1373HM1_1374HM1_1375
HINF71421 HI_0576.1HI_0581HI_0580HI_0579
HINF374930 CGSHIEE_00080CGSHIEE_00055CGSHIEE_00060CGSHIEE_00065
HINF281310 NTHI0710NTHI0745NTHI0746NTHI0747
HHEP235279 HH_0360HH_0359HH_0358
HHAL349124 HHAL_1954HHAL_0863HHAL_0862HHAL_0861
HDUC233412 HD_1903HD_0655HD_0656HD_0657
HCHE349521 HCH_02547HCH_06222HCH_06221HCH_06220
HARS204773 HEAR3171HEAR3170HEAR3169
HACI382638 HAC_1577HAC_1576HAC_1575
GURA351605 GURA_1063GURA_1064GURA_1065
GSUL243231 GSU_2861.1GSU_2861GSU_2860
GMET269799 GMET_0621GMET_0622GMET_0623
GKAU235909 GK0101GK0102GK0103
FTUL458234 FTA_0248FTA_0249FTA_0250
FTUL418136 FTW_1761FTW_1760FTW_1759
FTUL401614 FTN_0235FTN_0236FTN_0237
FTUL393115 FTF0321FTF0322FTF0323
FTUL393011 FTH_0227FTH_0228FTH_0229
FTUL351581 FTL_0232FTL_0233FTL_0234
FRANT RPSLRPSGFUSA
FPHI484022 FPHI_0590FPHI_0589FPHI_0588
ESP42895 ENT638_3761ENT638_3759ENT638_3758ENT638_2081
ELIT314225 ELI_08220ELI_08215ELI_08210
EFER585054 EFER_3314EFER_3312EFER_3311EFER_3310
EFAE226185 EF_0198EF_0199EF_0200
ECOO157 YHEMRPSLRPSGFUSA
ECOL83334 ECS4195ECS4193ECS4192ECS4191
ECOL585397 ECED1_4004ECED1_4002ECED1_4001ECED1_4000
ECOL585057 ECIAI39_3824ECIAI39_3822ECIAI39_3821ECIAI39_3820
ECOL585056 ECUMN_3804ECUMN_3802ECUMN_3801ECUMN_3800
ECOL585055 EC55989_3747EC55989_3745EC55989_3744EC55989_3743
ECOL585035 ECS88_3732ECS88_3730ECS88_3729ECS88_3728
ECOL585034 ECIAI1_3480ECIAI1_3478ECIAI1_3477ECIAI1_3476
ECOL481805 ECOLC_0369ECOLC_0371ECOLC_0372ECOLC_0373
ECOL469008 ECBD_0405ECBD_0407ECBD_0408ECBD_0409
ECOL439855 ECSMS35_3625ECSMS35_3623ECSMS35_3622ECSMS35_3621
ECOL413997 ECB_03195ECB_03193ECB_03192ECB_03191
ECOL409438 ECSE_3605ECSE_3603ECSE_3602ECSE_3601
ECOL405955 APECO1_3109APECO1_3111APECO1_3112APECO1_3113
ECOL364106 UTI89_C3846UTI89_C3844UTI89_C3843UTI89_C3842
ECOL362663 ECP_3434ECP_3432ECP_3431ECP_3430
ECOL331111 ECE24377A_3813ECE24377A_3811ECE24377A_3810ECE24377A_3809
ECOL316407 ECK3331:JW3306:B3344ECK3329:JW3304:B3342ECK3328:JW3303:B3341ECK3327:JW3302:B3340
ECOL199310 C4118C4116C4114C4112
ECAR218491 ECA4040ECA4038ECA4037ECA4036
DVUL882 DVU_1298DVU_1299DVU_1300
DRED349161 DRED_0210DRED_0211DRED_0212
DNOD246195 DNO_1280DNO_1279DNO_1278
DDES207559 DDE_2263DDE_2262DDE_2261
DARO159087 DARO_0314DARO_0315DARO_0316
CVIO243365 CV_4191CV_4190CV_4189
CVES412965 COSY_0792COSY_0164COSY_0165COSY_0166
CTET212717 CTC_02606CTC_02605CTC_02604
CTEP194439 CT_0856CT_2194CT_2192
CSAL290398 CSAL_1924CSAL_0416CSAL_0417CSAL_0418
CRUT413404 RMAG_0867RMAG_0160RMAG_0161RMAG_0162
CPSY167879 CPS_2348CPS_4767CPS_4766CPS_4765
CPER289380 CPR_2405CPR_2404CPR_2403
CPER195103 CPF_2719CPF_2718CPF_2717
CPER195102 CPE2410CPE2409CPE2408
CNOV386415 NT01CX_1110NT01CX_1111NT01CX_1112
CKLU431943 CKL_0219CKL_0220CKL_0221
CJEJ407148 C8J_0453C8J_0454C8J_0455
CJEJ360109 JJD26997_1444JJD26997_1443JJD26997_1442
CJEJ354242 CJJ81176_0511CJJ81176_0512CJJ81176_0513
CJEJ195099 CJE_0540CJE_0541CJE_0542
CJEJ192222 CJ0491CJ0492CJ0493
CJAP155077 CJA_1663CJA_0694CJA_0695CJA_0696
CHYD246194 CHY_2315CHY_2314CHY_2313
CHOM360107 CHAB381_1660CHAB381_1659CHAB381_1658
CFET360106 CFF8240_1313CFF8240_1312CFF8240_1311
CCUR360105 CCV52592_0186CCV52592_0187CCV52592_0189
CCON360104 CCC13826_0179CCC13826_0180CCC13826_0181
CCHL340177 CAG_1951CAG_1856CAG_1854
CBUR434922 COXBU7E912_1859COXBU7E912_1858COXBU7E912_1857
CBUR360115 COXBURSA331_A0332COXBURSA331_A0333COXBURSA331_A0334
CBUR227377 CBU_0233CBU_0234CBU_0235
CBOT536232 CLM_3953CLM_3952CLM_3951
CBOT515621 CLJ_B3794CLJ_B3793CLJ_B3792
CBOT508765 CLL_A0233CLL_A0234CLL_A0235
CBOT498213 CLD_1019CLD_1020CLD_1021
CBOT441772 CLI_3668CLI_3667CLI_3666
CBOT441771 CLC_3430CLC_3429CLC_3428
CBOT441770 CLB_3542CLB_3541CLB_3540
CBOT36826 CBO3485CBO3484CBO3483
CBLO291272 BPEN_587BPEN_586BPEN_585
CBLO203907 BFL567BFL566BFL565
CBEI290402 CBEI_0146CBEI_0147CBEI_0148
CACE272562 CAC3140CAC3139CAC3138
BVIE269482 BCEP1808_0325BCEP1808_0326BCEP1808_2605
BTHA271848 BTH_I3073BTH_I3072BTH_I0756
BSP36773 BCEP18194_A3442BCEP18194_A3443BCEP18194_A3444
BSP107806 BU531BU529BU528BU527
BPSE320373 BURPS668_3751BURPS668_3750BURPS668_0952
BPSE320372 BURPS1710B_A4074BURPS1710B_A4073BURPS1710B_A1166
BPSE272560 BPSL3218BPSL3217BPSL0893
BPET94624 BPET4957BPET4956BPET4955
BPER257313 BP3608BP3609BP3610
BPAR257311 BPP0024BPP0025BPP0026
BMAL320389 BMA10247_3473BMA10247_3474BMA10247_3475
BMAL320388 BMASAVP1_A3174BMASAVP1_A3173BMASAVP1_A3172
BMAL243160 BMA_2637BMA_2636BMA_2635
BJAP224911 BLL5405BLL5404BLL5403
BCIC186490 BCI_0490BCI_0492BCI_0493BCI_0494
BCEN331272 BCEN2424_0343BCEN2424_0344BCEN2424_2528
BCEN331271 BCEN_2764BCEN_2763BCEN_2762
BBRO257310 BB0024BB0025BB4259
BAPH372461 BCC_348BCC_346BCC_345BCC_344
BAPH198804 BUSG512BUSG510BUSG509BUSG508
BAMB398577 BAMMC406_0271BAMMC406_0272BAMMC406_2446
BAMB339670 BAMB_0262BAMB_0263BAMB_0264
ASP76114 EBA3820EBA3822EBA3824
ASP62977 ACIAD0881ACIAD0883ACIAD0884
ASP62928 AZO3422AZO3421AZO3420
ASP232721 AJS_0273AJS_0274AJS_0275
ASAL382245 ASA_0288ASA_0290ASA_0291ASA_0292
APLE434271 APJL_1676APJL_1426APJL_1425
APLE416269 APL_1643APL_1401APL_1400APL_1399
AHYD196024 AHA_4023AHA_4021AHA_4020AHA_4019
AFER243159 AFE_2710AFE_2709AFE_2708
AEHR187272 MLG_1656MLG_0453MLG_0454MLG_0455
ADEH290397 ADEH_1950ADEH_1949ADEH_1948
ABUT367737 ABU_1989ABU_1988ABU_1987
ABOR393595 ABO_0380ABO_0381ABO_0382
ABAU360910 BAV0020BAV0021BAV0022
ABAC204669 ACID345_1221ACID345_1222ACID345_1223
AAVE397945 AAVE_0333AAVE_0334AAVE_0335


Organism features enriched in list (features available for 247 out of the 259 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.002492560112
Arrangment:Singles 0.0045675135286
Disease:Bubonic_plague 0.005582266
Disease:Dysentery 0.005582266
Disease:Gastroenteritis 0.00021861213
Endospores:No 2.094e-1152211
GC_Content_Range4:0-40 2.511e-957213
GC_Content_Range4:40-60 1.323e-6122224
GC_Content_Range7:30-40 5.101e-1038166
GC_Content_Range7:50-60 1.987e-871107
Genome_Size_Range5:0-2 4.614e-1034155
Genome_Size_Range5:4-6 1.694e-10113184
Genome_Size_Range9:1-2 2.972e-828128
Genome_Size_Range9:4-5 7.393e-66096
Genome_Size_Range9:5-6 0.00011835388
Genome_Size_Range9:6-8 0.00153242538
Gram_Stain:Gram_Neg 4.622e-27203333
Gram_Stain:Gram_Pos 2.351e-1524150
Habitat:Host-associated 0.009919176206
Habitat:Multiple 0.000068796178
Habitat:Specialized 0.00235661353
Motility:No 7.686e-837151
Motility:Yes 2.107e-9148267
Optimal_temp.:25-35 0.0042472114
Optimal_temp.:35-37 0.00001181313
Oxygen_Req:Microaerophilic 0.00004331618
Pathogenic_in:No 0.006192783226
Shape:Coccus 1.223e-91182
Shape:Rod 2.935e-10183347
Shape:Sphere 0.0023265219
Temp._range:Hyperthermophilic 0.0000407123
Temp._range:Psychrophilic 0.005109289



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 189
Effective number of orgs (counting one per cluster within 468 clusters): 152

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPEN368408 ncbi Thermofilum pendens Hrk 50
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP644076 Silicibacter sp. TrichCH4B1
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-11
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 231
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ951
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LACI272621 ncbi Lactobacillus acidophilus NCFM1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1351
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  G7713   EG10911   EG10906   EG10360   
WPIP955
WPIP80849 WB_0515
UURE95667
UURE95664 UUR10_0612
UPAR505682
UMET351160
TVOL273116
TTHE300852 TTHA1697
TTHE262724 TT_C1333
TROS309801 TRD_0988
TPEN368408
TMAR243274 TM_1505
TLET416591 TLET_0574
TKOD69014
TDEN243275 TDE_1047
TACI273075
STOK273063
SSP644076 SCH4B_1021
SSOL273057
SSAP342451 SSP2209
SRUB309807 SRU_1030
SPYO370553 MGAS2096_SPY0249
SPNE488221 SP70585_0330
SPNE487213 SPT_0317
SPNE171101 SPR0249
SPNE170187 SPN08152
SMAR399550
SHAE279808 SH2461
SEPI176280 SE_0310
SEPI176279 SERP0187
SAUR93062 SACOL0592
SAUR93061 SAOUHSC_00528
SAUR426430 NWMN_0508
SAUR418127 SAHV_0544
SAUR367830
SAUR359787 SAURJH1_0583
SAUR359786 SAURJH9_0569
SAUR282459 SAS0504
SAUR282458 SAR0551
SAUR273036 SAB0497
SAUR196620 MW0501
SAUR158879 SA0504
SAUR158878 SAV0546
SACI56780 SYN_03255
SACI330779
RTYP257363
RSP357808 ROSERS_1188
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAS383372 RCAS_4029
RCAN293613
RBEL391896 A1I_01480
RBEL336407 RBE_1160
RALB246199 GRAORF_0044
RAKA293614
PTOR263820
PSP117
PRUM264731 GFRORF2133
PPEN278197 PEPE_1421
PMOB403833 PMOB_0794
PISL384616
PINT246198 PIN_A1018
PHOR70601
PGIN242619 PG_1942
PFUR186497
PDIS435591 BDI_2384
PAST100379
PARS340102
PAER178306
PABY272844
OTSU357244
NSP35761 NOCA_3925
NSEN222891
NPHA348780
MTUB419947 MRA_0691
MTUB336982 TBFG_10696
MTHE349307
MTHE187420
MTBRV RV0682
MTBCDC MT0710
MSYN262723
MSTA339860
MSME246196 MSMEG_1398
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632 MSC_0159
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311 MFL622
MCAP340047 MCAP_0153
MBUR259564
MBOV410289 BCG_0731
MBOV233413 MB0701
MBAR269797
MART243272
MAEO419665
MACE188937
LSAK314315 LSA1769
LREU557436 LREU_1487
LPLA220668 LP_1026
LMES203120 LEUM_0188
LLAC272623
LLAC272622
LJOH257314 LJ_0336
LINT267671
LINT189518
LHEL405566 LHV_0309
LGAS324831 LGAS_0288
LDEL390333 LDB0393
LDEL321956 LBUL_0347
LCAS321967 LSEI_2509
LBOR355277
LBOR355276
LACI272621 LBA0288
IHOS453591
HWAL362976
HSP64091
HSAL478009
HMUK485914
HMAR272569
HBUT415426
HAUR316274 HAUR_3277
FSUC59374
FNUC190304 FN1556
FNOD381764 FNOD_1143
FJOH376686 FJOH_0401
ERUM302409
ERUM254945
ECHA205920
ECAN269484
DSP255470 CBDBA435
DSP216389 DEHABAV1_0448
DRAD243230 DR_0305
DGEO319795 DGEO_1873
DETH243164
CSUL444179 SMGWSS_218
CPRO264201 PC0209
CPNE182082 CPB0573
CPNE138677 CPJ0552
CPNE115713 CPN0552
CPNE115711 CP_0200
CMET456442
CMAQ397948
CKOR374847
CJEI306537 JK1842
CHUT269798 CHU_3166
CGLU196627 CG0581
CFEL264202 CF0817
CDIP257309 DIP0467
CCAV227941 CCA_00190
CABO218497 CAB186
BXEN266265
BTUR314724 BT0387
BTHE226186 BT_2731
BHER314723 BH0387
BGAR290434 BG0388
BFRA295405 BF4185
BFRA272559 BF4007
BBUR224326 BB_0387
BAFZ390236 BAPKO_0402
AYEL322098
AURANTIMONAS
APHA212042 APH_1035
APER272557
ANAE240017 ANA_0019
AMAR234826 AM249
ALAI441768 ACL_0186
AFUL224325
AAUR290340 AAUR_2955


Organism features enriched in list (features available for 176 out of the 189 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00113791692
Arrangment:Clusters 7.141e-71517
Arrangment:Tetrads 0.008108744
Disease:Leptospirosis 0.008108744
Disease:Pharyngitis 0.001186978
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 1.517e-61111
Disease:bronchitis_and_pneumonitis 0.001186978
Endospores:No 1.241e-18111211
GC_Content_Range4:0-40 6.934e-995213
GC_Content_Range4:40-60 0.004713855224
GC_Content_Range4:60-100 0.000024825145
GC_Content_Range7:0-30 0.00011302647
GC_Content_Range7:30-40 0.000078269166
GC_Content_Range7:50-60 0.000013015107
GC_Content_Range7:60-70 0.000275825134
Genome_Size_Range5:0-2 5.176e-1586155
Genome_Size_Range5:4-6 4.601e-1419184
Genome_Size_Range5:6-10 0.0007602547
Genome_Size_Range9:0-1 0.00024731727
Genome_Size_Range9:1-2 1.025e-1069128
Genome_Size_Range9:2-3 0.000470751120
Genome_Size_Range9:3-4 0.00903571577
Genome_Size_Range9:4-5 0.00002441396
Genome_Size_Range9:5-6 9.470e-9688
Genome_Size_Range9:6-8 0.0024301438
Gram_Stain:Gram_Neg 1.496e-1262333
Habitat:Host-associated 3.822e-686206
Habitat:Multiple 3.038e-729178
Habitat:Specialized 0.00005742953
Habitat:Terrestrial 0.0045143331
Motility:No 0.000078164151
Motility:Yes 2.171e-753267
Optimal_temp.:- 0.000061357257
Optimal_temp.:30-37 3.066e-61518
Optimal_temp.:85 0.008108744
Oxygen_Req:Anaerobic 0.000034648102
Salinity:Extreme_halophilic 0.003518767
Shape:Coccus 0.00006544082
Shape:Irregular_coccus 8.185e-101717
Shape:Pleomorphic 0.009920968
Shape:Rod 2.379e-1365347
Shape:Sphere 1.037e-61619
Temp._range:Hyperthermophilic 1.538e-71923
Temp._range:Mesophilic 0.0000307125473
Temp._range:Thermophilic 0.00880711735



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181950.7127
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002140.5819
GLYCOCAT-PWY (glycogen degradation I)2461890.5779
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761520.5703
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911590.5622
PWY-1269 (CMP-KDO biosynthesis I)3252190.5469
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912030.5354
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902020.5317
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962040.5279
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162470.5121
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482220.5072
PWY-5913 (TCA cycle variation IV)3012010.4944
AST-PWY (arginine degradation II (AST pathway))1201070.4717
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251630.4710
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951460.4560
PWY-5918 (heme biosynthesis I)2721820.4526
DAPLYSINESYN-PWY (lysine biosynthesis I)3422100.4439
KDOSYN-PWY (KDO transfer to lipid IVA I)1801360.4395
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791350.4360
PWY0-901 (selenocysteine biosynthesis I (bacteria))2301600.4345
REDCITCYC (TCA cycle variation II)1741320.4331
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222370.4289
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861840.4255
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81770.4196
TYRFUMCAT-PWY (tyrosine degradation I)1841350.4177
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982260.4105
LIPASYN-PWY (phospholipases)2121470.4046



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10911   EG10906   EG10360   
G77130.998890.9987740.998541
EG109110.9999970.999979
EG109060.999988
EG10360



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PAIRWISE BLAST SCORES:

  G7713   EG10911   EG10906   EG10360   
G77130.0f0---
EG10911-0.0f0--
EG10906--0.0f0-
EG10360---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-3953 (30S ribosomal subunit) (degree of match pw to cand: 0.087, degree of match cand to pw: 0.500, average score: 0.590)
  Genes in pathway or complex:
             0.1719 0.0671 EG11508 (sra) EG11508-MONOMER (30S ribosomal subunit protein S22)
             0.7840 0.7029 EG10920 (rpsU) EG10920-MONOMER (30S ribosomal subunit protein S21)
             0.3413 0.2608 EG10919 (rpsT) EG10919-MONOMER (30S ribosomal subunit protein S20)
             0.9978 0.9919 EG10918 (rpsS) EG10918-MONOMER (30S ribosomal subunit protein S19)
             0.8113 0.6061 EG10917 (rpsR) EG10917-MONOMER (30S ribosomal subunit protein S18)
             0.9977 0.9916 EG10916 (rpsQ) EG10916-MONOMER (30S ribosomal subunit protein S17)
             0.3401 0.1266 EG10915 (rpsP) EG10915-MONOMER (30S ribosomal subunit protein S16)
             0.1965 0.0023 EG10914 (rpsO) EG10914-MONOMER (30S ribosomal subunit protein S15)
             0.9975 0.9916 EG10913 (rpsN) EG10913-MONOMER (30S ribosomal subunit protein S14)
             0.9968 0.9881 EG10912 (rpsM) EG10912-MONOMER (30S ribosomal subunit protein S13)
   *in cand* 0.9997 0.9989 EG10911 (rpsL) EG10911-MONOMER (30S ribosomal subunit protein S12)
             0.9962 0.9860 EG10910 (rpsK) EG10910-MONOMER (30S ribosomal subunit protein S11)
             0.9989 0.9958 EG10909 (rpsJ) EG10909-MONOMER (30S ribosomal subunit protein S10)
             0.9693 0.8844 EG10908 (rpsI) EG10908-MONOMER (30S ribosomal subunit protein S9)
             0.9975 0.9908 EG10907 (rpsH) EG10907-MONOMER (30S ribosomal subunit protein S8)
   *in cand* 0.9997 0.9988 EG10906 (rpsG) EG10906-MONOMER (30S ribosomal subunit protein S7)
             0.8450 0.7150 EG10905 (rpsF) EG10905-MONOMER (30S ribosomal subunit protein S6)
             0.9972 0.9896 EG10904 (rpsE) EG10904-MONOMER (30S ribosomal subunit protein S5)
             0.9960 0.9855 EG10903 (rpsD) EG10903-MONOMER (30S ribosomal subunit protein S4)
             0.9983 0.9936 EG10902 (rpsC) EG10902-MONOMER (30S ribosomal subunit protein S3)
             0.0813 0.0034 EG10901 (rpsB) EG10901-MONOMER (30S ribosomal subunit protein S2)
             0.1551 0.0006 EG10900 (rpsA) EG10900-MONOMER (30S ribosomal subunit protein S1)
                NIL    NIL EG30084 (rrsA) RRSA-RRNA (16S ribosomal RNA (rrsA))
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9985 EG10360 (fusA) EG10360-MONOMER (elongation factor G)
   *in cand* 0.9991 0.9985 G7713 (yheM) G7713-MONOMER (sulfur transfer protein complex, TusC subunit)

- CPLX0-3964 (ribosome) (degree of match pw to cand: 0.034, degree of match cand to pw: 0.500, average score: 0.685)
  Genes in pathway or complex:
                NIL    NIL EG30077 (rrlA) RRLA-RRNA (23S ribosomal RNA (rrlA))
                NIL    NIL EG30070 (rrfA) RRFA-RRNA (5S ribosomal RNA (rrfA))
             0.9905 0.9629 EG10864 (rplA) EG10864-MONOMER (50S ribosomal subunit protein L1)
             0.9985 0.9945 EG10865 (rplB) EG10865-MONOMER (50S ribosomal subunit protein L2)
             0.9986 0.9949 EG10866 (rplC) EG10866-MONOMER (50S ribosomal subunit protein L3)
             0.9986 0.9949 EG10867 (rplD) EG10867-MONOMER (50S ribosomal subunit protein L4)
             0.9976 0.9913 EG10868 (rplE) EG10868-MONOMER (50S ribosomal subunit protein L5)
             0.9974 0.9907 EG10869 (rplF) EG10869-MONOMER (50S ribosomal subunit protein L6)
             0.9909 0.9640 EG10873 (rplL) MONOMER0-2811 (50S ribosomal subunit protein L7)
             0.9910 0.9645 EG10871 (rplJ) EG10871-MONOMER (50S ribosomal subunit protein L10)
             0.8537 0.7396 EG10870 (rplI) EG10870-MONOMER (50S ribosomal subunit protein L9)
             0.9892 0.9575 EG10872 (rplK) EG10872-MONOMER (50S ribosomal subunit protein L11)
             0.9680 0.8766 EG10874 (rplM) EG10874-MONOMER (50S ribosomal subunit protein L13)
             0.9976 0.9911 EG10875 (rplN) EG10875-MONOMER (50S ribosomal subunit protein L14)
             0.9970 0.9892 EG10876 (rplO) EG10876-MONOMER (50S ribosomal subunit protein L15)
             0.9982 0.9934 EG10877 (rplP) EG10877-MONOMER (50S ribosomal subunit protein L16)
             0.9965 0.9872 EG10878 (rplQ) EG10878-MONOMER (50S ribosomal subunit protein L17)
             0.9974 0.9906 EG10879 (rplR) EG10879-MONOMER (50S ribosomal subunit protein L18)
             0.2588 0.0034 EG10880 (rplS) EG10880-MONOMER (50S ribosomal subunit protein L19)
             0.1977 0.0000 EG10881 (rplT) EG10881-MONOMER (50S ribosomal subunit protein L20)
             0.8449 0.7771 EG50001 (rplU) EG50001-MONOMER (50S ribosomal subunit protein L21)
             0.9983 0.9938 EG10882 (rplV) EG10882-MONOMER (50S ribosomal subunit protein L22)
             0.9985 0.9944 EG10883 (rplW) EG10883-MONOMER (50S ribosomal subunit protein L23)
             0.9978 0.9921 EG10884 (rplX) EG10884-MONOMER (50S ribosomal subunit protein L24)
             0.4387 0.1126 EG10885 (rplY) EG10885-MONOMER (50S ribosomal subunit protein L25)
             0.8336 0.7746 EG50002 (rpmA) EG50002-MONOMER (50S ribosomal subunit protein L27)
             0.7977 0.6161 EG10886 (rpmB) EG10886-MONOMER (50S ribosomal subunit protein L28)
             0.9980 0.9928 EG10887 (rpmC) EG10887-MONOMER (50S ribosomal subunit protein L29)
             0.9969 0.9887 EG10888 (rpmD) EG10888-MONOMER (50S ribosomal subunit protein L30)
             0.9124 0.7094 EG10889 (rpmE) EG10889-MONOMER (50S ribosomal subunit protein L31)
             0.0847 0.0000 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
             0.9115 0.6707 EG10891 (rpmG) EG10891-MONOMER (50S ribosomal subunit protein L33)
             0.9090 0.6651 EG10892 (rpmH) EG10892-MONOMER (50S ribosomal subunit protein L34)
             0.2231 0.0254 EG11231 (rpmI) EG11231-MONOMER (50S ribosomal subunit protein L35)
             0.9953 0.9825 EG11232 (rpmJ) EG11232-MONOMER (50S ribosomal subunit protein L36)
                NIL    NIL EG30084 (rrsA) RRSA-RRNA (16S ribosomal RNA (rrsA))
             0.1551 0.0006 EG10900 (rpsA) EG10900-MONOMER (30S ribosomal subunit protein S1)
             0.0813 0.0034 EG10901 (rpsB) EG10901-MONOMER (30S ribosomal subunit protein S2)
             0.9983 0.9936 EG10902 (rpsC) EG10902-MONOMER (30S ribosomal subunit protein S3)
             0.9960 0.9855 EG10903 (rpsD) EG10903-MONOMER (30S ribosomal subunit protein S4)
             0.9972 0.9896 EG10904 (rpsE) EG10904-MONOMER (30S ribosomal subunit protein S5)
             0.8450 0.7150 EG10905 (rpsF) EG10905-MONOMER (30S ribosomal subunit protein S6)
   *in cand* 0.9997 0.9988 EG10906 (rpsG) EG10906-MONOMER (30S ribosomal subunit protein S7)
             0.9975 0.9908 EG10907 (rpsH) EG10907-MONOMER (30S ribosomal subunit protein S8)
             0.9693 0.8844 EG10908 (rpsI) EG10908-MONOMER (30S ribosomal subunit protein S9)
             0.9989 0.9958 EG10909 (rpsJ) EG10909-MONOMER (30S ribosomal subunit protein S10)
             0.9962 0.9860 EG10910 (rpsK) EG10910-MONOMER (30S ribosomal subunit protein S11)
   *in cand* 0.9997 0.9989 EG10911 (rpsL) EG10911-MONOMER (30S ribosomal subunit protein S12)
             0.9968 0.9881 EG10912 (rpsM) EG10912-MONOMER (30S ribosomal subunit protein S13)
             0.9975 0.9916 EG10913 (rpsN) EG10913-MONOMER (30S ribosomal subunit protein S14)
             0.1965 0.0023 EG10914 (rpsO) EG10914-MONOMER (30S ribosomal subunit protein S15)
             0.3401 0.1266 EG10915 (rpsP) EG10915-MONOMER (30S ribosomal subunit protein S16)
             0.9977 0.9916 EG10916 (rpsQ) EG10916-MONOMER (30S ribosomal subunit protein S17)
             0.8113 0.6061 EG10917 (rpsR) EG10917-MONOMER (30S ribosomal subunit protein S18)
             0.9978 0.9919 EG10918 (rpsS) EG10918-MONOMER (30S ribosomal subunit protein S19)
             0.3413 0.2608 EG10919 (rpsT) EG10919-MONOMER (30S ribosomal subunit protein S20)
             0.7840 0.7029 EG10920 (rpsU) EG10920-MONOMER (30S ribosomal subunit protein S21)
             0.1719 0.0671 EG11508 (sra) EG11508-MONOMER (30S ribosomal subunit protein S22)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9985 EG10360 (fusA) EG10360-MONOMER (elongation factor G)
   *in cand* 0.9991 0.9985 G7713 (yheM) G7713-MONOMER (sulfur transfer protein complex, TusC subunit)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10360 EG10906 EG10911 G7713 (centered at EG10911)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7713   EG10911   EG10906   EG10360   
107/623425/623417/623381/623
AAEO224324:0:Tyes-1304-0
AAUR290340:2:Tyes-0--
AAVE397945:0:Tyes-012
ABAC204669:0:Tyes-012
ABAU360910:0:Tyes-012
ABOR393595:0:Tyes-012
ABUT367737:0:Tyes-210
ACAU438753:0:Tyes-10-
ACEL351607:0:Tyes-0-2
ACRY349163:8:Tyes-10-
ADEH290397:0:Tyes-210
AEHR187272:0:Tyes1195012
AFER243159:0:Tyes-210
AHYD196024:0:Tyes4210
ALAI441768:0:Tyes--0-
AMAR234826:0:Tyes-0--
AMAR329726:9:Tyes-2-0
AMET293826:0:Tyes--10
ANAE240017:0:Tyes-0--
AORE350688:0:Tyes--01
APHA212042:0:Tyes-0--
APLE416269:0:Tyes259210
APLE434271:0:Tno26510-
ASAL382245:5:Tyes0234
ASP1667:3:Tyes-10-
ASP232721:2:Tyes-012
ASP62928:0:Tyes-210
ASP62977:0:Tyes-012
ASP76114:2:Tyes-012
AVAR240292:3:Tyes-2-0
BABO262698:1:Tno-10-
BAFZ390236:2:Fyes-0--
BAMB339670:3:Tno-012
BAMB398577:3:Tno-012206
BAMY326423:0:Tyes--01
BANT260799:0:Tno--01
BANT261594:2:Tno--01
BANT568206:2:Tyes--01
BANT592021:2:Tno--01
BAPH198804:0:Tyes4210
BAPH372461:0:Tyes4210
BBAC264462:0:Tyes-10-
BBAC360095:0:Tyes-01-
BBRO257310:0:Tyes-014275
BBUR224326:21:Fno-0--
BCAN483179:1:Tno-10-
BCEN331271:2:Tno-210
BCEN331272:3:Tyes-012181
BCER226900:1:Tyes--01
BCER288681:0:Tno--01
BCER315749:1:Tyes--01
BCER405917:1:Tyes--01
BCER572264:1:Tno--01
BCIC186490:0:Tyes0234
BCLA66692:0:Tyes--01
BFRA272559:1:Tyes-0--
BFRA295405:0:Tno-0--
BGAR290434:2:Fyes-0--
BHAL272558:0:Tyes--01
BHEN283166:0:Tyes-10-
BHER314723:0:Fyes-0--
BJAP224911:0:Fyes-210
BLIC279010:0:Tyes--01
BLON206672:0:Tyes-10-
BMAL243160:1:Tno-210
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ZMOB264203:0:Tyes--01



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