CANDIDATE ID: 1032

CANDIDATE ID: 1032

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9935517e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7416 (ygbI) (b2735)
   Products of gene:
     - G7416-MONOMER (predicted DNA-binding transcriptional regulator, DEOR-type)

- EG13235 (mngA) (b0731)
   Products of gene:
     - HRSA-MONOMER (MngA)
     - CPLX-163 (2-O-α-mannosyl-D-glycerate transporting phosphotransferase system)
       Reactions:
        phosphoenolpyruvate + mannosylglycerate[periplasmic space]  ->  2-O-(6-phospho-alpha-mannosyl)-D-glycerate[cytosol] + pyruvate

- EG10700 (pfkB) (b1723)
   Products of gene:
     - 6PFK-2-MONOMER (6-phosphofructokinase-2 monomer)
     - 6PFK-2-CPX (6-phosphofructokinase II)
       Reactions:
        tagatose-6-phosphate + ATP  ->  tagatose-1,6-bisphosphate + ADP + 2 H+
         In pathways
         GALACTITOLCAT-PWY (galactitol degradation)
         LACTOSECAT-PWY (LACTOSECAT-PWY)
        D-fructose-6-phosphate + ATP  ->  ADP + fructose-1,6-bisphosphate + 2 H+
         In pathways
         PWY-5464 (PWY-5464)
         GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         ANAEROFRUCAT-PWY (ANAEROFRUCAT-PWY)
         P441-PWY (P441-PWY)
         PWY-3801 (PWY-3801)
         PWY-1042 (PWY-1042)
         PWY-1861 (PWY-1861)
         ANAGLYCOLYSIS-PWY (ANAGLYCOLYSIS-PWY)
         GLYCOLYSIS (glycolysis I)
         PWY-5484 (PWY-5484)

- EG10337 (fruK) (b2168)
   Products of gene:
     - 1-PFK-MONOMER (1-phosphofructokinase monomer)
     - 1-PFK (1-phosphofructokinase)
       Reactions:
        ATP + fructose-1-phosphate  ->  ADP + fructose-1,6-bisphosphate + 2 H+
         In pathways
         PWY0-1314 (fructose degradation)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 233
Effective number of orgs (counting one per cluster within 468 clusters): 144

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VCHO345073 ncbi Vibrio cholerae O3953
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169613
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP28240 Thermotoga sp.4
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TFUS269800 ncbi Thermobifida fusca YX3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSUI391296 ncbi Streptococcus suis 98HAH333
SSUI391295 ncbi Streptococcus suis 05ZYH334
SSON300269 ncbi Shigella sonnei Ss0464
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153053
SPYO370554 ncbi Streptococcus pyogenes MGAS107503
SPYO370553 ncbi Streptococcus pyogenes MGAS20963
SPYO370552 ncbi Streptococcus pyogenes MGAS102703
SPYO370551 ncbi Streptococcus pyogenes MGAS94293
SPYO319701 ncbi Streptococcus pyogenes MGAS61803
SPYO293653 ncbi Streptococcus pyogenes MGAS50053
SPYO286636 ncbi Streptococcus pyogenes MGAS103943
SPYO198466 ncbi Streptococcus pyogenes MGAS3153
SPYO193567 ncbi Streptococcus pyogenes SSI-13
SPYO186103 ncbi Streptococcus pyogenes MGAS82323
SPYO160490 ncbi Streptococcus pyogenes M1 GAS3
SPRO399741 ncbi Serratia proteamaculans 5684
SPNE488221 ncbi Streptococcus pneumoniae 705854
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-64
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-144
SPNE171101 ncbi Streptococcus pneumoniae R64
SPNE170187 ncbi Streptococcus pneumoniae G544
SPNE1313 Streptococcus pneumoniae4
SMUT210007 ncbi Streptococcus mutans UA1593
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14353
SGOR29390 Streptococcus gordonii Challis4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122283
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2274
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SARE391037 ncbi Salinispora arenicola CNS-2053
SAGA211110 ncbi Streptococcus agalactiae NEM3164
SAGA208435 ncbi Streptococcus agalactiae 2603V/R4
SAGA205921 ncbi Streptococcus agalactiae A9094
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99413
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSP101510 ncbi Rhodococcus jostii RHA14
RSOL267608 ncbi Ralstonia solanacearum GMI10003
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332094
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15013
PSP296591 ncbi Polaromonas sp. JS6663
PPUT76869 ncbi Pseudomonas putida GB-13
PPUT351746 ncbi Pseudomonas putida F13
PPUT160488 ncbi Pseudomonas putida KT24403
PPRO298386 ncbi Photobacterium profundum SS94
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257454
PMEN399739 ncbi Pseudomonas mendocina ymp3
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 373
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-13
PENT384676 ncbi Pseudomonas entomophila L483
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
PACN267747 ncbi Propionibacterium acnes KPA1712024
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
NSP35761 Nocardioides sp.4
NFAR247156 ncbi Nocardia farcinica IFM 101524
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-14
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP189918 ncbi Mycobacterium sp. KMS4
MSP164757 ncbi Mycobacterium sp. JLS4
MSP164756 ncbi Mycobacterium sp. MCS4
MSME246196 ncbi Mycobacterium smegmatis MC2 1554
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
LXYL281090 ncbi Leifsonia xyli xyli CTCB074
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53344
LSPH444177 ncbi Lysinibacillus sphaericus C3-413
LSAK314315 ncbi Lactobacillus sakei sakei 23K4
LPLA220668 ncbi Lactobacillus plantarum WCFS14
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LJOH257314 ncbi Lactobacillus johnsonii NCC 5333
LINN272626 ncbi Listeria innocua Clip112624
LHEL405566 ncbi Lactobacillus helveticus DPC 45713
LGAS324831 ncbi Lactobacillus gasseri ATCC 333233
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118423
LCAS321967 ncbi Lactobacillus casei ATCC 3343
LACI272621 ncbi Lactobacillus acidophilus NCFM3
KRAD266940 ncbi Kineococcus radiotolerans SRS302163
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
HMUK485914 ncbi Halomicrobium mukohataei DSM 122863
HMAR272569 ncbi Haloarcula marismortui ATCC 430494
HINF71421 ncbi Haemophilus influenzae Rd KW203
HINF374930 ncbi Haemophilus influenzae PittEE4
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237793
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FSP1855 Frankia sp. EAN1pec3
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255863
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5833
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DRAD243230 ncbi Deinococcus radiodurans R13
DGEO319795 ncbi Deinococcus geothermalis DSM 113003
CVIO243365 ncbi Chromobacterium violaceum ATCC 124723
CSAL290398 ncbi Chromohalobacter salexigens DSM 30433
CPHY357809 ncbi Clostridium phytofermentans ISDg3
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CNOV386415 ncbi Clostridium novyi NT3
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3824
CMIC31964 ncbi Clavibacter michiganensis sepedonicus4
CEFF196164 ncbi Corynebacterium efficiens YS-3143
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131293
CDIF272563 ncbi Clostridium difficile 6303
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto4
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBOT498213 ncbi Clostridium botulinum B1 str. Okra4
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall3
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BTUR314724 ncbi Borrelia turicatae 91E1353
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUB ncbi Bacillus subtilis subtilis 1684
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BHER314723 ncbi Borrelia hermsii DAH3
BHAL272558 ncbi Bacillus halodurans C-1254
BGAR290434 ncbi Borrelia garinii PBi3
BCLA66692 ncbi Bacillus clausii KSM-K164
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W3
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BBUR224326 ncbi Borrelia burgdorferi B313
BANT592021 ncbi Bacillus anthracis A02483
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor3
BANT260799 ncbi Bacillus anthracis Sterne3
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAFZ390236 ncbi Borrelia afzelii PKo3
ASP62977 ncbi Acinetobacter sp. ADP13
ASP1667 Arthrobacter sp.4
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL033
APLE416269 ncbi Actinobacillus pleuropneumoniae L203
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AHYD196024 Aeromonas hydrophila dhakensis4
ACRY349163 ncbi Acidiphilium cryptum JF-54
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAUR290340 ncbi Arthrobacter aurescens TC14


Names of the homologs of the genes in the group in each of these orgs
  G7416   EG13235   EG10700   EG10337   
YPSE349747 YPSIP31758_2145YPSIP31758_2681YPSIP31758_2682YPSIP31758_2682
YPSE273123 YPTB1936YPTB1331YPTB1330YPTB1330
YPES386656 YPDSF_1186YPDSF_2397YPDSF_2398YPDSF_2398
YPES377628 YPN_2741YPN_2679YPN_2680YPN_2680
YPES360102 YPA_1320YPA_1017YPA_1016YPA_1016
YPES349746 YPANGOLA_A2128YPANGOLA_A1526YPANGOLA_A1525YPANGOLA_A1525
YPES214092 YPO1938YPO1300YPO1299YPO1299
YPES187410 Y2373Y2885Y2886Y2886
YENT393305 YE2504YE1449YE1448YE1448
XORY360094 XOOORF_1890XOOORF_1891XOOORF_1891
XORY342109 XOO2652XOO2651XOO2651
XORY291331 XOO2812XOO2811XOO2811
XCAM487884 XCC-B100_1800XCC-B100_1801XCC-B100_1801
XCAM316273 XCAORF_2652XCAORF_2651XCAORF_2651
XCAM314565 XC_1742XC_1743XC_1743
XCAM190485 XCC2372XCC2371XCC2371
XAXO190486 XAC2503XAC2502XAC2502
VVUL216895 VV2_1026VV2_0198VV2_0199VV2_0199
VVUL196600 VVA1520VVA0704VVA0705VVA0705
VPAR223926 VP0358VPA1424VPA0812VPA0812
VFIS312309 VFA1006VFA0709VFA0941VFA0941
VCHO345073 VC0395_A1421VC0395_0450VC0395_0450
VCHO VC1826VCA0517VCA0517
TTEN273068 TTE2588TTE2585TTE2587TTE2587
TSP28240 TRQ2_0642TRQ2_0639TRQ2_0641TRQ2_0641
TSP1755 TETH514_0575TETH514_0578TETH514_0576TETH514_0576
TPSE340099 TETH39_0150TETH39_0153TETH39_0151TETH39_0151
TFUS269800 TFU_0907TFU_0696TFU_0696
STYP99287 STM2919STM3255STM1326STM2205
STHE292459 STH2298STH796STH794STH1246
SSUI391296 SSU98_0825SSU98_0824SSU98_0824
SSUI391295 SSU05_0822SSU05_0824SSU05_0823SSU05_0823
SSON300269 SSO_2883SSO_0682SSO_1434SSO_2224
SSAP342451 SSP2017SSP2018SSP2018
SPYO370554 MGAS10750_SPY0753MGAS10750_SPY0752MGAS10750_SPY0752
SPYO370553 MGAS2096_SPY0733MGAS2096_SPY1661MGAS2096_SPY1661
SPYO370552 MGAS10270_SPY0721MGAS10270_SPY0720MGAS10270_SPY0720
SPYO370551 MGAS9429_SPY0717MGAS9429_SPY0716MGAS9429_SPY0716
SPYO319701 M28_SPY0643M28_SPY0642M28_SPY0642
SPYO293653 M5005_SPY0662M5005_SPY0661M5005_SPY0661
SPYO286636 M6_SPY0681M6_SPY0680M6_SPY0680
SPYO198466 SPYM3_0580SPYM3_1657SPYM3_0579
SPYO193567 SPS1274SPS1275SPS1275
SPYO186103 SPYM18_0914SPYM18_0913SPYM18_0913
SPYO160490 SPY0855SPY0854SPY0854
SPRO399741 SPRO_1493SPRO_3228SPRO_3229SPRO_3229
SPNE488221 SP70585_0913SP70585_0915SP70585_0914SP70585_0914
SPNE487214 SPH_0979SPH_0981SPH_0980SPH_0980
SPNE487213 SPT_1326SPT_1324SPT_1325SPT_1325
SPNE171101 SPR0778SPR0780SPR0779SPR0779
SPNE170187 SPN03040SPN03043SPN03041SPN03041
SPNE1313 SPJ_0816SPJ_0818SPJ_0817SPJ_0817
SMUT210007 SMU_872SMU_113SMU_871
SHIGELLA YGBIHRSAPFKBFRUK
SHAE279808 SH2194SH2195SH2195
SGOR29390 SGO_1608SGO_1113SGO_1112SGO_1112
SFLE373384 SFV_2768SFV_2242SFV_1498SFV_2243
SFLE198214 AAN44244.1AAN42210.1AAN43098.1AAN43772.1
SERY405948 SACE_0763SACE_2275SACE_2273SACE_2273
SEPI176280 SE_2228SE_0471SE_0471
SEPI176279 SERP0357SERP2260SERP0358SERP0358
SENT454169 SEHA_C3108SEHA_C2440SEHA_C1455SEHA_C2441
SENT321314 SCH_2849SCH_2220SCH_1347SCH_2221
SENT295319 SPA2776SPA3124SPA1518SPA0646
SENT220341 STY3044STY3437STY1785STY2441
SENT209261 T2820T3175T1206T0649
SDYS300267 SDY_2262SDY_2315SDY_1816SDY_2316
SCO SCO1026SCO3196SCO4283SCO4283
SBOY300268 SBO_2785SBO_0589SBO_1367SBO_2156
SAVE227882 SAV1433SAV3688SAV3689SAV3942
SAUR93062 SACOL0757SACOL2663SACOL0758SACOL0758
SAUR93061 SAOUHSC_00706SAOUHSC_00708SAOUHSC_00707SAOUHSC_00707
SAUR426430 NWMN_0667NWMN_0669NWMN_0668NWMN_0668
SAUR418127 SAHV_0695SAHV_0697SAHV_0696SAHV_0696
SAUR367830 SAUSA300_0683SAUSA300_0685SAUSA300_0684SAUSA300_0684
SAUR359787 SAURJH1_0738SAURJH1_0740SAURJH1_0739SAURJH1_0739
SAUR359786 SAURJH9_0722SAURJH9_0724SAURJH9_0723SAURJH9_0723
SAUR282459 SAS0663SAS0665SAS0664SAS0664
SAUR282458 SAR0751SAR0753SAR0752SAR0752
SAUR273036 SAB0647SAB0649SAB0648SAB0648
SAUR196620 MW0660MW0662MW0661MW0661
SAUR158879 SA0653SA0655SA0654SA0654
SAUR158878 SAV0698SAV0700SAV0699SAV0699
SARE391037 SARE_4851SARE_4850SARE_4850
SAGA211110 GBS1418GBS1416GBS1417GBS1417
SAGA208435 SAG_1348SAG_1346SAG_1347SAG_1347
SAGA205921 SAK_1379SAK_1377SAK_1378SAK_1378
RXYL266117 RXYL_1687RXYL_2297RXYL_2297
RSPH349102 RSPH17025_2377RSPH17025_0612RSPH17025_1592RSPH17025_0611
RSPH349101 RSPH17029_2109RSPH17029_0435RSPH17029_1009RSPH17029_0434
RSPH272943 RSP_0457RSP_1788RSP_2334RSP_1787
RSP101510 RHA1_RO06784RHA1_RO06782RHA1_RO00056RHA1_RO06783
RSOL267608 RSC2863RSC2862RSC2862
RSAL288705 RSAL33209_2788RSAL33209_3143RSAL33209_3141RSAL33209_3141
RRUB269796 RRU_A1265RRU_A1970RRU_A1971RRU_A1971
PSYR223283 PSPTO_0362PSPTO_0956PSPTO_0955PSPTO_0955
PSYR205918 PSYR_4814PSYR_0823PSYR_0822PSYR_0822
PSTU379731 PST_0990PST_2404PST_0989
PSP296591 BPRO_0477BPRO_2756BPRO_2756
PPUT76869 PPUTGB1_0829PPUTGB1_0828PPUTGB1_0828
PPUT351746 PPUT_0818PPUT_0817PPUT_0817
PPUT160488 PP_0795PP_0794PP_0794
PPRO298386 PBPRB1036PBPRA2715PBPRA1574PBPRA1574
PPEN278197 PEPE_1166PEPE_1164PEPE_1165PEPE_0141
PMEN399739 PMEN_0788PMEN_0787PMEN_0787
PLUM243265 PLU2511PLU1993PLU2858PLU2858
PING357804 PING_3553PING_3552PING_3552
PFLU220664 PFL_3340PFL_0861PFL_0860PFL_0860
PFLU216595 PFLU2357PFLU0806PFLU0805PFLU0805
PFLU205922 PFL_0795PFL_0794PFL_0794
PENT384676 PSEEN0934PSEEN0933PSEEN0933
PAER208964 PA1490PA3560PA3561PA3561
PAER208963 PA14_45150PA14_18275PA14_18260PA14_18260
PACN267747 PPA2326PPA0142PPA0143PPA0143
OIHE221109 OB2808OB0838OB0839OB0839
NSP35761 NOCA_3321NOCA_3184NOCA_3183NOCA_3183
NFAR247156 NFA28560NFA28540NFA28550NFA28550
MVAN350058 MVAN_0096MVAN_0094MVAN_4105MVAN_0095
MTHE264732 MOTH_0698MOTH_0013MOTH_0012MOTH_0012
MSUC221988 MS1983MS2178MS2179MS2179
MSP189918 MKMS_0091MKMS_0089MKMS_3475MKMS_0090
MSP164757 MJLS_0072MJLS_0070MJLS_3423MJLS_0071
MSP164756 MMCS_0082MMCS_0080MMCS_3412MMCS_0081
MSME246196 MSMEG_0087MSMEG_0085MSMEG_3947MSMEG_0086
MGIL350054 MFLV_0750MFLV_0752MFLV_4987MFLV_0751
LXYL281090 LXX18550LXX06600LXX06580LXX06580
LWEL386043 LWE2289LWE2287LWE0799LWE0799
LSPH444177 BSPH_1356BSPH_1257BSPH_1257
LSAK314315 LSA1048LSA1050LSA1049LSA1049
LPLA220668 LP_2095LP_2097LP_2096LP_2096
LMON265669 LMOF2365_2307LMOF2365_2305LMOF2365_2306LMOF2365_2306
LMON169963 LMO2337LMO2335LMO2336LMO2336
LJOH257314 LJ_0146LJ_0145LJ_0145
LINN272626 LIN2431LIN2429LIN2430LIN2430
LHEL405566 LHV_1844LHV_1845LHV_1845
LGAS324831 LGAS_0149LGAS_1727LGAS_0148
LDEL390333 LDB2040LDB2041LDB2041
LCAS321967 LSEI_1347LSEI_1348LSEI_1348
LACI272621 LBA1777LBA1778LBA1778
KRAD266940 KRAD_3971KRAD_1536KRAD_1536
KPNE272620 GKPORF_B0665GKPORF_B1884GKPORF_B1312GKPORF_B1885
HMUK485914 HMUK_2660HMUK_2661HMUK_2661
HMAR272569 RRNAC0341PNG7387RRNAC0342RRNAC0342
HINF71421 HI_1009HI_0446HI_0447
HINF374930 CGSHIEE_02075CGSHIEE_00760CGSHIEE_00755CGSHIEE_00755
HAUR316274 HAUR_4714HAUR_4713HAUR_4713
GTHE420246 GTNG_1728GTNG_3217GTNG_1727GTNG_1727
GKAU235909 GK1840GK1838GK1839GK1839
GBET391165 GBCGDNIH1_0410GBCGDNIH1_0411GBCGDNIH1_0411
FSP1855 FRANEAN1_7075FRANEAN1_7074FRANEAN1_7074
FNUC190304 FN1441FN1440FN1440
ESP42895 ENT638_3571ENT638_2761ENT638_1721ENT638_2762
EFER585054 EFER_4362EFER_2373EFER_1345EFER_2255
EFAE226185 EF_0717EF_1806EF_0693
ECOO157 AGARFRUAPFKBFRUK
ECOL83334 ECS4009ECS3059ECS2429ECS3060
ECOL585397 ECED1_3188ECED1_2615ECED1_1926ECED1_2616
ECOL585057 ECIAI39_3630ECIAI39_2307ECIAI39_1331ECIAI39_2308
ECOL585056 ECUMN_3613ECUMN_2503ECUMN_2012ECUMN_2504
ECOL585055 EC55989_3002EC55989_0714EC55989_1890EC55989_2421
ECOL585035 ECS88_3002ECS88_2315ECS88_1775ECS88_2316
ECOL585034 ECIAI1_2830ECIAI1_0704ECIAI1_1781ECIAI1_2248
ECOL481805 ECOLC_0977ECOLC_2925ECOLC_1909ECOLC_1480
ECOL469008 ECBD_0989ECBD_2930ECBD_1922ECBD_1490
ECOL439855 ECSMS35_3428ECSMS35_2314ECSMS35_1468ECSMS35_2315
ECOL413997 ECB_02585ECB_00690ECB_01692ECB_02097
ECOL409438 ECSE_2983ECSE_0790ECSE_1892ECSE_2436
ECOL405955 APECO1_3789APECO1_4387APECO1_793APECO1_4386
ECOL364106 UTI89_C3101UTI89_C2442UTI89_C1916UTI89_C2443
ECOL362663 ECP_2713ECP_2207ECP_1670ECP_2208
ECOL331111 ECE24377A_3032ECE24377A_0757ECE24377A_1943ECE24377A_2465
ECOL316407 ECK2730:JW2705:B2735ECK0719:JW0720:B0731ECK1721:JW5280:B1723ECK2161:JW2155:B2168
ECOL199310 C3296C2702C2121C2703
ECAR218491 ECA4325ECA2727ECA2728ECA2728
DRAD243230 DR_B0073DR_B0074DR_B0074
DGEO319795 DGEO_2175DGEO_2174DGEO_2174
CVIO243365 CV_3054CV_3053CV_3053
CSAL290398 CSAL_2646CSAL_2647CSAL_2647
CPHY357809 CPHY_1187CPHY_3901CPHY_3901
CPER289380 CPR_0552CPR_0550CPR_0551CPR_0551
CPER195103 CPF_0566CPF_0564CPF_0565CPF_0565
CPER195102 CPE0586CPE0584CPE0585CPE0585
CNOV386415 NT01CX_0637NT01CX_0289NT01CX_0289
CMIC443906 CMM_2517CMM_1504CMM_1503CMM_1503
CMIC31964 CMS0580CMS1801CMS1802CMS1802
CEFF196164 CE1829CE1828CE1828
CDIP257309 DIP1427DIP1430DIP1430
CDIF272563 CD3086CD2270CD2270
CBOT536232 CLM_2411CLM_2208CLM_2209CLM_1923
CBOT515621 CLJ_B2418CLJ_B2196CLJ_B2197CLJ_B1944
CBOT508765 CLL_A2126CLL_A2297CLL_A2297
CBOT498213 CLD_2367CLD_2633CLD_2632CLD_2876
CBOT441772 CLI_2257CLI_2058CLI_2059CLI_1758
CBOT441771 CLC_1937CLC_1938CLC_1706
CBOT441770 CLB_2149CLB_1931CLB_1932CLB_1698
CBOT36826 CBO2210CBO1991CBO1992CBO1763
CBEI290402 CBEI_1844CBEI_1843CBEI_1843
CACE272562 CAC0231CAC0234CAC0232CAC0232
BWEI315730 BCERKBAB4_3484BCERKBAB4_3482BCERKBAB4_3483BCERKBAB4_3483
BTUR314724 BT0629BT0630BT0630
BTHU412694 BALH_3346BALH_3344BALH_3345BALH_3345
BTHU281309 BT9727_3464BT9727_3462BT9727_3463BT9727_3463
BTHA271848 BTH_II1182BTH_II0908BTH_II0415BTH_II0907
BSUB BSU36300BSU14400BSU14390BSU14390
BPUM315750 BPUM_1334BPUM_1336BPUM_1335BPUM_1335
BLIC279010 BL02485BL01606BL01605BL01605
BHER314723 BH0629BH0630BH0630
BHAL272558 BH0801BH0828BH0827BH0827
BGAR290434 BG0650BG0651BG0651
BCLA66692 ABC0658ABC0859ABC1270ABC1270
BCER572264 BCA_3809BCA_3807BCA_3808BCA_3808
BCER405917 BCE_3744BCE_3745BCE_3745
BCER315749 BCER98_2396BCER98_2394BCER98_2395BCER98_2395
BCER288681 BCE33L3478BCE33L3476BCE33L3477BCE33L3477
BCER226900 BC_1329BC_3718BC_3719BC_3719
BBUR224326 BB_0629BB_0630BB_0630
BANT592021 BAA_3869BAA_3870BAA_3870
BANT568206 BAMEG_0787BAMEG_0786BAMEG_0786
BANT261594 GBAA3846GBAA3847GBAA3847
BANT260799 BAS3563BAS3564BAS3564
BAMY326423 RBAM_012190RBAM_014140RBAM_014130RBAM_014130
BAFZ390236 BAPKO_0671BAPKO_0672BAPKO_0672
ASP62977 ACIAD1993ACIAD1992ACIAD1992
ASP1667 ARTH_3382ARTH_0299ARTH_0237ARTH_0237
ASAL382245 ASA_3578ASA_1397ASA_1940ASA_1940
APLE434271 APJL_0359APJL_0360APJL_0360
APLE416269 APL_0343APL_0344APL_0344
AMET293826 AMET_0825AMET_0828AMET_0826AMET_0826
AHYD196024 AHA_1062AHA_1421AHA_2347AHA_2347
ACRY349163 ACRY_1144ACRY_0189ACRY_0188ACRY_0188
ABAC204669 ACID345_3908ACID345_0661ACID345_0661
AAVE397945 AAVE_0603AAVE_4250AAVE_4251AAVE_4251
AAUR290340 AAUR_0350AAUR_0294AAUR_1468AAUR_0349


Organism features enriched in list (features available for 219 out of the 233 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 4.266e-85892
Arrangment:Clusters 1.204e-61617
Arrangment:Pairs 1.604e-970112
Disease:Botulism 0.007267455
Disease:Bubonic_plague 0.002690766
Disease:Dysentery 0.002690766
Disease:Gastroenteritis 0.00358761013
Disease:Pneumonia 0.0075037912
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00001791111
Disease:Wide_range_of_infections 0.00001791111
Endospores:Yes 1.109e-114353
Genome_Size_Range5:0-2 6.180e-1126155
Genome_Size_Range5:4-6 1.177e-10104184
Genome_Size_Range9:0-1 0.0015987327
Genome_Size_Range9:1-2 4.630e-823128
Genome_Size_Range9:4-5 0.00002295496
Genome_Size_Range9:5-6 0.00003415088
Gram_Stain:Gram_Neg 3.885e-894333
Gram_Stain:Gram_Pos 2.876e-28113150
Habitat:Aquatic 2.244e-81291
Habitat:Multiple 4.237e-896178
Habitat:Specialized 0.0000337753
Habitat:Terrestrial 0.00886351831
Motility:No 0.002814670151
Optimal_temp.:- 0.006671484257
Optimal_temp.:25-35 0.00024051214
Optimal_temp.:30-37 1.410e-81818
Oxygen_Req:Anaerobic 0.000029921102
Oxygen_Req:Facultative 1.393e-17123201
Pathogenic_in:Human 3.565e-10115213
Pathogenic_in:No 3.376e-757226
Pathogenic_in:Plant 0.00398321115
Salinity:Non-halophilic 0.000166456106
Shape:Coccus 0.00026314582
Shape:Rod 0.0000525152347
Shape:Sphere 0.0013018119
Shape:Spiral 0.0060647634
Temp._range:Hyperthermophilic 0.0002217123
Temp._range:Mesophilic 9.136e-10204473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 345
Effective number of orgs (counting one per cluster within 468 clusters): 289

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79011
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SONE211586 ncbi Shewanella oneidensis MR-11
SMEL266834 ncbi Sinorhizobium meliloti 10211
SMED366394 ncbi Sinorhizobium medicae WSM4191
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SLAC55218 Ruegeria lacuscaerulensis0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1851
SBAL399599 ncbi Shewanella baltica OS1951
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-31
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38411
RFER338969 ncbi Rhodoferax ferrireducens T1181
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H161
REUT264198 ncbi Ralstonia eutropha JMP1341
RETL347834 ncbi Rhizobium etli CFN 421
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 230
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491881
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP400668 ncbi Marinomonas sp. MWYL11
MSP266779 ncbi Chelativorans sp. BNC10
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1291
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030991
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G371
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LCHO395495 ncbi Leptothrix cholodnii SP-61
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DRED349161 ncbi Desulfotomaculum reducens MI-11
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus1
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234451
BSUI204722 ncbi Brucella suis 13301
BSP36773 Burkholderia sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis1
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M1
BLON206672 ncbi Bifidobacterium longum NCC27051
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHEN283166 ncbi Bartonella henselae Houston-10
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCEN331272 ncbi Burkholderia cenocepacia HI24240
BCEN331271 ncbi Burkholderia cenocepacia AU 10540
BCAN483179 ncbi Brucella canis ATCC 233651
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAMB339670 ncbi Burkholderia ambifaria AMMD0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS421
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N1
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7416   EG13235   EG10700   EG10337   
ZMOB264203
XFAS405440
XFAS183190
XFAS160492
XAUT78245
WSUC273121
WPIP955
WPIP80849
VEIS391735 VEIS_2323
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629 TERTU_4353
TTHE300852
TTHE262724
TROS309801 TRD_A0402
TPET390874 TPET_0099
TPEN368408
TPAL243276
TMAR243274 TM_0828
TLET416591 TLET_0826
TKOD69014
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025
TACI273075
SWOL335541
STRO369723
STOK273063
SSP94122 SHEWANA3_2702
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SSED425104
SRUB309807
SPEA398579 SPEA_4235
SONE211586 SO_4742
SMEL266834 SMC01615
SMED366394 SMED_2151
SMAR399550
SLOI323850 SHEW_3840
SLAC55218
SHAL458817 SHAL_4286
SFUM335543
SELO269084
SDEN318161
SDEG203122
SBAL402882 SHEW185_4361
SBAL399599 SBAL195_4503
SALA317655
SACI56780
SACI330779
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RPOM246200 SPO_0731
RPAL316055 RPE_0769
RMET266264 RMET_2235
RMAS416276
RLEG216596 PRL120255
RFER338969 RFER_3677
RFEL315456
REUT381666 H16_A2504
REUT264198 REUT_A2210
RETL347834 RHE_PE00290
RDEN375451 RD1_2885
RCON272944
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PTHE370438
PSP56811
PSP312153
PSP117 RB2590
PRUM264731
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PCAR338963 PCAR_0940
PATL342610
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844
OTSU357244
OCAR504832
OANT439375 OANT_3571
NWIN323098
NSP387092
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
NARO279238 SARO_1048
MTUB419947 MRA_2044
MTUB336982 TBFG_12066
MTHE187420
MTBRV RV2029C
MTBCDC MT2088
MSYN262723
MSTA339860
MSP409
MSP400668 MMWYL1_2548
MSP266779
MSED399549
MPUL272635 MYPU_1290
MPNE272634 MPN078
MPET420662
MPEN272633 MYPE7670
MMOB267748 MMOB6060
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLOT266835 MLR7274
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP490
MHYO262722 MHP7448_0492
MHYO262719 MHJ_0489
MHUN323259
MGEN243273 MG_062
MFLA265072
MEXT419610
MCAP243233
MBUR259564
MBOV410289 BCG_2048C
MBOV233413 MB2054C
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMES203120
LINT363253
LINT267671
LINT189518
LCHO395495 LCHO_3222
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
JSP375286
JSP290400
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSOM228400 HSM_1902
HSOM205914 HS_0011
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMOD498761 HM1_2674
HHEP235279
HHAL349124
HDUC233412
HCHE349521
HBUT415426
HARS204773
HACI382638
GVIO251221
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP106370
FRANT
FPHI484022
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DRED349161 DRED_0131
DPSY177439
DOLE96561
DHAF138119
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP78 CAUL_0312
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077 CJA_3803
CHYD246194
CHOM360107
CFET360106
CFEL264202
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BXEN266265
BTRI382640
BTHE226186
BSUI470137 BSUIS_B0150
BSUI204722 BR_A0146
BSP36773
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BOVI236 GBOORFA0143
BMEL359391 BAB2_0143
BMEL224914 BMEII1093
BLON206672 BL1212
BJAP224911 BLR4659
BHEN283166
BFRA295405
BFRA272559
BCIC186490
BCEN331272
BCEN331271
BCAN483179 BCAN_B0147
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAMB339670
BABO262698 BRUAB2_0142
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114
ASP62928
ASP232721 AJS_0383
APHA212042
APER272557
AORE350688 CLOS_2546
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AEHR187272
ADEH290397
ACEL351607 ACEL_0720
ACAU438753
ABUT367737
ABOR393595
ABAU360910 BAV2010
AAEO224324


Organism features enriched in list (features available for 323 out of the 345 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.819e-92592
Arrangment:Clusters 0.0000182117
Arrangment:Pairs 6.517e-935112
Disease:Pharyngitis 0.008536488
Disease:bronchitis_and_pneumonitis 0.008536488
Endospores:Yes 1.743e-9953
GC_Content_Range7:40-50 0.005506976117
Genome_Size_Range5:0-2 3.853e-8114155
Genome_Size_Range5:2-4 0.0054038122197
Genome_Size_Range5:4-6 6.778e-1166184
Genome_Size_Range9:0-1 0.00070772327
Genome_Size_Range9:1-2 0.000019091128
Genome_Size_Range9:4-5 0.00012683796
Genome_Size_Range9:5-6 2.479e-62988
Gram_Stain:Gram_Neg 3.194e-6211333
Gram_Stain:Gram_Pos 1.191e-2727150
Habitat:Aquatic 1.414e-107791
Habitat:Multiple 2.187e-1064178
Habitat:Specialized 0.00002934353
Habitat:Terrestrial 0.0015410931
Motility:No 0.000517267151
Optimal_temp.:- 0.0013709159257
Optimal_temp.:25-35 0.0001847114
Oxygen_Req:Aerobic 0.0024330117185
Oxygen_Req:Anaerobic 0.000519071102
Oxygen_Req:Facultative 1.969e-2059201
Oxygen_Req:Microaerophilic 0.00953631518
Pathogenic_in:Human 5.612e-790213
Pathogenic_in:No 0.0000634147226
Pathogenic_in:Plant 0.0043974315
Salinity:Non-halophilic 0.000568644106
Shape:Coccus 0.00004322982
Shape:Irregular_coccus 0.00348681517
Shape:Rod 0.0000269169347
Shape:Spiral 0.00052612834
Temp._range:Hyperthermophilic 0.00001752223
Temp._range:Mesophilic 2.718e-8237473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1314 (fructose degradation)2242000.8035
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))1211130.5681
GLUAMCAT-PWY (N-acetylglucosamine degradation I)3562060.4884
P122-PWY (heterolactic fermentation)1191010.4768
IDNCAT-PWY (L-idonate degradation)2461620.4750
PWY-5497 (purine nucleotides degradation IV (anaerobic))1221010.4629
SUCUTIL-PWY (sucrose degradation I)1241020.4621
PWY-5480 (pyruvate fermentation to ethanol I)109920.4474
PWY-922 (mevalonate pathway I)1991370.4452
PWY0-381 (glycerol degradation I)4172190.4445
GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation)1341040.4350
PWY0-1324 (N-acetylneuraminate and N-acetylmannosamine degradation)1351040.4309
SERDEG-PWY (L-serine degradation)3491930.4175
MANNIDEG-PWY (mannitol degradation I)99830.4172
TEICHOICACID-PWY (teichoic acid (poly-glycerol) biosynthesis)98820.4132
P441-PWY (superpathway of N-acetylneuraminate degradation)63610.4119
LACTOSECAT-PWY (lactose and galactose degradation I)71660.4118
PWY-5676 (acetyl-CoA fermentation to butyrate II)2841680.4115
PWY0-1295 (pyrimidine ribonucleosides degradation I)2391490.4067



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG13235   EG10700   EG10337   
G74160.9987010.9987740.999106
EG132350.9997790.999852
EG107000.999919
EG10337



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PAIRWISE BLAST SCORES:

  G7416   EG13235   EG10700   EG10337   
G74160.0f0---
EG13235-0.0f0--
EG10700--0.0f08.2e-24
EG10337--2.0e-220.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7416 (centered at G7416)
EG13235 (centered at EG13235)
EG10700 (centered at EG10700)
EG10337 (centered at EG10337)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7416   EG13235   EG10700   EG10337   
222/623240/623275/623271/623
AAUR290340:2:Tyes560115255
AAVE397945:0:Tyes0358335843584
ABAC204669:0:Tyes3270-00
ABAU360910:0:Tyes0---
ACEL351607:0:Tyes0---
ACRY349163:8:Tyes954100
AFER243159:0:Tyes--00
AHYD196024:0:Tyes035512661266
AMET293826:0:Tyes0311
ANAE240017:0:Tyes02244--
AORE350688:0:Tyes0---
APLE416269:0:Tyes-011
APLE434271:0:Tno-011
ASAL382245:5:Tyes20910524524
ASP1667:3:Tyes31746200
ASP232721:2:Tyes0---
ASP62977:0:Tyes-100
BABO262698:0:Tno0---
BAFZ390236:2:Fyes-011
BAMB398577:1:Tno--00
BAMY326423:0:Tyes0195194194
BANT260799:0:Tno-011
BANT261594:2:Tno-011
BANT568206:2:Tyes-100
BANT592021:2:Tno-011
BBUR224326:21:Fno-011
BCAN483179:0:Tno0---
BCER226900:1:Tyes0233323342334
BCER288681:0:Tno2011
BCER315749:1:Tyes2011
BCER405917:1:Tyes-011
BCER572264:1:Tno2011
BCLA66692:0:Tyes0208627627
BGAR290434:2:Fyes-011
BHAL272558:0:Tyes0262525
BHER314723:0:Fyes-011
BJAP224911:0:Fyes--0-
BLIC279010:0:Tyes2133100
BLON206672:0:Tyes0---
BMAL243160:0:Tno905-0-
BMAL320388:0:Tno0-1194-
BMAL320389:0:Tyes1063-0-
BMEL224914:0:Tno0---
BMEL359391:0:Tno0---
BOVI236:0:Tyes0---
BPSE272560:0:Tyes0-718-
BPSE320372:0:Tno0-975-
BPSE320373:0:Tno0-1060-
BPUM315750:0:Tyes0211
BSP376:0:Tyes--00
BSUB:0:Tyes2293100
BSUI204722:0:Tyes0---
BSUI470137:0:Tno0---
BTHA271848:0:Tno7644900489
BTHU281309:1:Tno2011
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ESP42895:1:Tyes1861103801039
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SCO:2:Fyes0219833083308
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VVUL196600:1:Tyes821011
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XORY360094:0:Tno-022
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YPES360102:3:Tyes312100
YPES377628:2:Tno62011
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YPSE273123:2:Tno601100
YPSE349747:2:Tno0528529529



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