CANDIDATE ID: 1054

CANDIDATE ID: 1054

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9899850e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10264 (entF) (b0586)
   Products of gene:
     - ENTF-MONOMER (apo-serine activating enzyme)
     - ENTF-PANT (aryl carrier protein / serine activating enzyme)
       Reactions:
        3 2,3-dihydroxybenzoyl-AMP + 3 L-seryl-AMP  =  enterobactin + 6 AMP + 6 H+
        ATP + L-serine  =  diphosphate + L-seryl-AMP + H+
     - ENTMULTI-CPLX (enterobactin synthase multienzyme complex)
       Reactions:
        6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate  =  6 diphosphate + 6 AMP + enterobactin + 9 H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         ENTBACSYN-PWY (enterobactin biosynthesis)

- EG10263 (entE) (b0594)
   Products of gene:
     - ENTE-MONOMER (EntE)
     - ENTE-CPLX (2,3-dihydroxybenzoate-holo-EntB ligase [multifunctional])
       Reactions:
        holo-EntB + 2,3-dihydroxybenzoate + ATP  ->  aryl-EntB + AMP + diphosphate
        ATP + 2,3-dihydroxybenzoate  =  diphosphate + 2,3-dihydroxybenzoyl-AMP
         In pathways
         PWY-6374 (PWY-6374)
        ATP + ATP  =  5',5'''-diadenosine tetraphosphate + diphosphate + H+
     - ENTMULTI-CPLX (enterobactin synthase multienzyme complex)
       Reactions:
        6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate  =  6 diphosphate + 6 AMP + enterobactin + 9 H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         ENTBACSYN-PWY (enterobactin biosynthesis)

- EG10260 (entB) (b0595)
   Products of gene:
     - CPLX0-7849 (aryl-EntB)
     - ENTB-CPLX (isochorismatase)
       Reactions:
        isochorismate + H2O  =  pyruvate + 2,3-dihydro-2,3-dihydroxybenzoate
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         PWY-6374 (PWY-6374)
         PWY-5903 (PWY-5903)
         ENTBACSYN-PWY (enterobactin biosynthesis)
         PWY-5901 (2,3-dihydroxybenzoate biosynthesis)
     - ENTB-MONOMER (EntB)
     - APO-ENTB (apo-EntB)
       Regulatees:
     - ENTMULTI-CPLX (enterobactin synthase multienzyme complex)
       Reactions:
        6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate  =  6 diphosphate + 6 AMP + enterobactin + 9 H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         ENTBACSYN-PWY (enterobactin biosynthesis)

- EG10259 (entA) (b0596)
   Products of gene:
     - ENTA-MONOMER (EntA)
     - ENTA-CPLX (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase)
       Reactions:
        NAD+ + 2,3-dihydro-2,3-dihydroxybenzoate  ->  NADH + 2,3-dihydroxybenzoate + H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         PWY-6374 (PWY-6374)
         PWY-5903 (PWY-5903)
         ENTBACSYN-PWY (enterobactin biosynthesis)
         PWY-5901 (2,3-dihydroxybenzoate biosynthesis)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 129
Effective number of orgs (counting one per cluster within 468 clusters): 82

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
VVUL216895 ncbi Vibrio vulnificus CMCP63
VVUL196600 ncbi Vibrio vulnificus YJ0163
VCHO345073 ncbi Vibrio cholerae O3953
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169613
TTUR377629 ncbi Teredinibacter turnerae T79014
TTHE300852 ncbi Thermus thermophilus HB83
TTHE262724 ncbi Thermus thermophilus HB273
TFUS269800 ncbi Thermobifida fusca YX4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSON300269 ncbi Shigella sonnei Ss0464
SPRO399741 ncbi Serratia proteamaculans 5684
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4194
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEG203122 ncbi Saccharophagus degradans 2-403
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2274
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SARE391037 ncbi Salinispora arenicola CNS-2053
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99413
RSP101510 ncbi Rhodococcus jostii RHA14
RPOM246200 ncbi Ruegeria pomeroyi DSS-33
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
REUT381666 ncbi Ralstonia eutropha H163
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30003
PPUT160488 ncbi Pseudomonas putida KT24403
PPRO298386 ncbi Photobacterium profundum SS94
PMEN399739 ncbi Pseudomonas mendocina ymp3
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PENT384676 ncbi Pseudomonas entomophila L483
PAER208964 ncbi Pseudomonas aeruginosa PAO13
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NFAR247156 ncbi Nocardia farcinica IFM 101523
MXAN246197 ncbi Myxococcus xanthus DK 16224
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-14
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL14
MSP189918 ncbi Mycobacterium sp. KMS3
MSP164757 ncbi Mycobacterium sp. JLS3
MSP164756 ncbi Mycobacterium sp. MCS3
MSME246196 ncbi Mycobacterium smegmatis MC2 1554
MLOT266835 ncbi Mesorhizobium loti MAFF3030993
MEXT419610 ncbi Methylobacterium extorquens PA13
MAVI243243 ncbi Mycobacterium avium 1043
MABS561007 ncbi Mycobacterium abscessus ATCC 199774
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
FSP1855 Frankia sp. EAN1pec4
FALN326424 ncbi Frankia alni ACN14a4
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CSP501479 Citreicella sp. SE454
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3823
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJEI306537 ncbi Corynebacterium jeikeium K4113
BXEN266265 ncbi Burkholderia xenovorans LB4003
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G43
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2643
BSUI204722 ncbi Brucella suis 13303
BSUB ncbi Bacillus subtilis subtilis 1684
BSP36773 Burkholderia sp.4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPER257313 ncbi Bordetella pertussis Tohama I3
BPAR257311 ncbi Bordetella parapertussis 128223
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23083
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BCLA66692 ncbi Bacillus clausii KSM-K163
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB503
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9413
ASP62977 ncbi Acinetobacter sp. ADP13
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
AHYD196024 Aeromonas hydrophila dhakensis3


Names of the homologs of the genes in the group in each of these orgs
  EG10264   EG10263   EG10260   EG10259   
VVUL216895 VV2_0836VV2_0838VV2_0834
VVUL196600 VVA1301VVA1304VVA1299
VCHO345073 VC0395_A0301VC0395_A0300VC0395_A0303
VCHO VC0772VC0771VC0774
TTUR377629 TERTU_2335TERTU_4060TERTU_4061TERTU_4062
TTHE300852 TTHA1463TTHA0328TTHB077
TTHE262724 TT_C1065TT_C1655TT_P0034
TFUS269800 TFU_1867TFU_1871TFU_1870TFU_1873
STYP99287 STM0588STM0596STM0597STM0598
SSON300269 SSO_0537SSO_0545SSO_0546SSO_0547
SPRO399741 SPRO_3427SPRO_3420SPRO_3419SPRO_3418
SMEL266834 SMA0150SMC02355SMA0059
SMED366394 SMED_6472SMED_5138SMED_3660SMED_5843
SHIGELLA ENTFENTEENTBENTA
SFLE373384 SFV_0532SFV_0542SFV_0543SFV_0544
SFLE198214 AAN42148.1AAN42156.1AAN42157.1AAN42158.1
SERY405948 SACE_3035SACE_3853SACE_3852SACE_3855
SENT454169 SEHA_C0700SEHA_C0708SEHA_C0709SEHA_C0710
SENT321314 SCH_0619SCH_0627SCH_0628SCH_0629
SENT295319 SPA2146SPA2138SPA2137SPA2136
SENT220341 STY0631STY0640STY0641STY0642
SENT209261 T2280T2272T2271T2270
SDYS300267 SDY_0515SDY_0525SDY_0526SDY_0527
SDEG203122 SDE_3399SDE_3398SDE_3393
SCO SCO3230SCO7681SCO4464SCO2490
SBOY300268 SBO_0447SBO_0455SBO_0456SBO_0457
SAVE227882 SAV3156SAV377SAV604SAV3801
SARE391037 SARE_0363SARE_4933SARE_1066
RXYL266117 RXYL_0353RXYL_1694RXYL_3047
RSP101510 RHA1_RO04715RHA1_RO04793RHA1_RO02318RHA1_RO04794
RPOM246200 SPO_2528SPO_1828SPO_2427
RPAL316056 RPC_2052RPC_1035RPC_4714RPC_3480
REUT381666 H16_B1685H16_B1693H16_B0651
PSYR223283 PSPTO_4699PSPTO_2597PSPTO_2981
PPUT160488 PP_4219PP_3458PP_1817
PPRO298386 PBPRB1821PBPRB1823PBPRB1822PBPRB1820
PMEN399739 PMEN_2869PMEN_3479PMEN_1651
PLUM243265 PLU1878PLU2729PLU2728PLU2727
PENT384676 PSEEN3229PSEEN2505PSEEN3111
PAER208964 PA2424PA4228PA4213
PAER208963 PA14_33280PA14_09240PA14_09450PA14_10130
OIHE221109 OB0958OB0956OB0957OB0954
NMUL323848 NMUL_A1829NMUL_A0968NMUL_A2142
NFAR247156 NFA31170NFA6200NFA33550
MXAN246197 MXAN_3634MXAN_3645MXAN_3644MXAN_3647
MVAN350058 MVAN_1000MVAN_3850MVAN_3849MVAN_0614
MSP409 M446_0171M446_1936M446_3062
MSP400668 MMWYL1_1617MMWYL1_1632MMWYL1_1623MMWYL1_1624
MSP189918 MKMS_3534MKMS_3533MKMS_2835
MSP164757 MJLS_3482MJLS_3481MJLS_2818
MSP164756 MMCS_3471MMCS_3470MMCS_2791
MSME246196 MSMEG_0019MSMEG_4516MSMEG_4515MSMEG_3607
MLOT266835 MLL5415MLL4498MLL7334
MEXT419610 MEXT_0876MEXT_1737MEXT_1326
MAVI243243 MAV_2013MAV_2008MAV_2009
MABS561007 MAB_4099CMAB_2247CMAB_0297MAB_0296
KPNE272620 GKPORF_B5024GKPORF_B5031GKPORF_B5032GKPORF_B5033
HCHE349521 HCH_03818HCH_06564HCH_06565HCH_06575
HAUR316274 HAUR_1882HAUR_1803HAUR_1804HAUR_1800
FSP1855 FRANEAN1_3063FRANEAN1_5941FRANEAN1_3619FRANEAN1_3218
FALN326424 FRAAL2547FRAAL4648FRAAL4160FRAAL5875
ESP42895 ENT638_1119ENT638_1126ENT638_1127ENT638_1128
EFER585054 EFER_2508EFER_2500EFER_2499EFER_2498
ECOO157 ENTFENTEENTBENTA
ECOL83334 ECS0625ECS0633ECS0634ECS0635
ECOL585397 ECED1_0582ECED1_0591ECED1_0592ECED1_0593
ECOL585057 ECIAI39_0563ECIAI39_0571ECIAI39_0572ECIAI39_0573
ECOL585056 ECUMN_0680ECUMN_0688ECUMN_0689ECUMN_0690
ECOL585055 EC55989_0578EC55989_0586EC55989_0587EC55989_0588
ECOL585035 ECS88_0625ECS88_0633ECS88_0634ECS88_0635
ECOL585034 ECIAI1_0570ECIAI1_0578ECIAI1_0579ECIAI1_0580
ECOL481805 ECOLC_3058ECOLC_3050ECOLC_3049ECOLC_3048
ECOL469008 ECBD_3069ECBD_3060ECBD_3059ECBD_3058
ECOL439855 ECSMS35_0606ECSMS35_0614ECSMS35_0615ECSMS35_0616
ECOL413997 ECB_00553ECB_00561ECB_00562ECB_00563
ECOL409438 ECSE_0653ECSE_0661ECSE_0662ECSE_0663
ECOL405955 APECO1_1463APECO1_1455APECO1_1454APECO1_1453
ECOL364106 UTI89_C0588UTI89_C0596UTI89_C0597UTI89_C0598
ECOL362663 ECP_0618ECP_0626ECP_0627ECP_0628
ECOL331111 ECE24377A_0606ECE24377A_0614ECE24377A_0615ECE24377A_0616
ECOL316407 ECK0579:JW0578:B0586ECK0587:JW0586:B0594ECK0588:JW0587:B0595ECK0589:JW0588:B0596
ECOL199310 C0673C0681C0682C0683
ECAR218491 ECA1488ECA0478ECA0479ECA0481
CVIO243365 CV_2233CV_1484CV_1483CV_1482
CSP501479 CSE45_4536CSE45_4534CSE45_2056CSE45_5162
CMIC443906 CMM_0332CMM_0331CMM_0400
CKLU431943 CKL_1504CKL_2496CKL_0106
CJEI306537 JK1820JK1820JK1819
BXEN266265 BXE_B0525BXE_B2021BXE_B1270
BWEI315730 BCERKBAB4_2179BCERKBAB4_2177BCERKBAB4_2178BCERKBAB4_2175
BVIE269482 BCEP1808_1585BCEP1808_2651BCEP1808_5101
BTHU412694 BALH_2111BALH_2109BALH_2110BALH_2107
BTHU281309 BT9727_2147BT9727_2145BT9727_2146BT9727_2143
BTHA271848 BTH_I2418BTH_II1830BTH_II2229
BSUI204722 BR_A0015BR_A0014BR_A0013
BSUB BSU31960BSU31980BSU31970BSU32000
BSP36773 BCEP18194_A4786BCEP18194_B0670BCEP18194_B1569BCEP18194_A3702
BPUM315750 BPUM_0323BPUM_1785BPUM_0514BPUM_3422
BPSE320373 BURPS668_A2294BURPS668_A0874BURPS668_A3032BURPS668_3449
BPSE320372 BURPS1710B_B0819BURPS1710B_B2509BURPS1710B_B1498BURPS1710B_A3762
BPSE272560 BPSS1634BPSS0584BPSS2153BPSL2969
BPER257313 BP0532BP2971BP2854
BPAR257311 BPP0455BPP1414BPP2784
BOVI236 GBOORFA0014GBOORFA0013GBOORFA0012
BMEL359391 BAB2_0014BAB2_0013BAB2_0012
BMEL224914 BMEII0078BMEII0079BMEII0080
BLIC279010 BL04024BL04022BL04023BL04020
BJAP224911 BLR2108BLR4049BLL0026
BCLA66692 ABC0589ABC0969ABC2301
BCER572264 BCA_2439BCA_2437BCA_2438BCA_2435
BCER405917 BCE_2402BCE_2400BCE_2401BCE_2398
BCER315749 BCER98_1758BCER98_1756BCER98_1757BCER98_1754
BCER288681 BCE33L2131BCE33L2129BCE33L2130BCE33L2127
BCER226900 BC_2306BC_2304BC_2305BC_2302
BCEN331272 BCEN2424_1640BCEN2424_5000BCEN2424_4572BCEN2424_0620
BCEN331271 BCEN_1160BCEN_3367BCEN_3796BCEN_0137
BCAN483179 BCAN_B0017BCAN_B0016BCAN_B0015
BBRO257310 BB0455BB2483BB2701
BANT592021 BAA_2430BAA_2428BAA_2429BAA_2426
BANT568206 BAMEG_2228BAMEG_2230BAMEG_2229BAMEG_2232
BANT261594 GBAA2372GBAA2370GBAA2371GBAA2368
BANT260799 BAS2208BAS2206BAS2207BAS2204
BAMY326423 RBAM_029010RBAM_029030RBAM_029020RBAM_029050
BAMB398577 BAMMC406_1558BAMMC406_2477BAMMC406_4464BAMMC406_0545
BAMB339670 BAMB_1537BAMB_1689BAMB_1688BAMB_1685
BABO262698 BRUAB2_0015BRUAB2_0014BRUAB2_0013
ASP62977 ACIAD2770ACIAD2775ACIAD2774
ASAL382245 ASA_1839ASA_1840ASA_1842
AHYD196024 AHA_2478AHA_2477AHA_2475


Organism features enriched in list (features available for 120 out of the 129 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.001090835112
Disease:Anthrax 0.001724344
Disease:Brucellosis 0.006894045
Disease:Dysentery 0.000068766
Disease:Melioidosis 0.008547633
Disease:Opportunistic_infections 0.006894045
Endospores:No 0.000145227211
Endospores:Yes 0.00001292453
GC_Content_Range4:0-40 1.925e-1213213
GC_Content_Range4:40-60 0.002223259224
GC_Content_Range4:60-100 0.000016348145
GC_Content_Range7:30-40 2.034e-713166
GC_Content_Range7:40-50 0.006274015117
GC_Content_Range7:50-60 3.233e-844107
GC_Content_Range7:60-70 0.000612141134
GC_Content_Range7:70-100 0.0018660711
Genome_Size_Range5:2-4 1.349e-816197
Genome_Size_Range5:4-6 2.562e-1372184
Genome_Size_Range5:6-10 1.440e-133247
Genome_Size_Range9:2-3 2.594e-103120
Genome_Size_Range9:4-5 0.00899602896
Genome_Size_Range9:5-6 9.232e-124488
Genome_Size_Range9:6-8 3.064e-92438
Genome_Size_Range9:8-10 0.000019389
Habitat:Aquatic 0.00455181091
Habitat:Multiple 0.003906848178
Habitat:Terrestrial 0.00001261731
Motility:No 0.000286917151
Motility:Yes 4.039e-779267
Oxygen_Req:Aerobic 0.003033950185
Oxygen_Req:Anaerobic 1.487e-101102
Oxygen_Req:Facultative 0.000168858201
Pathogenic_in:Human 0.000997158213
Pathogenic_in:No 0.000167230226
Shape:Branched_filament 0.001724344
Shape:Coccus 3.852e-7282
Shape:Rod 1.700e-11102347
Temp._range:Mesophilic 0.0002446110473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 405
Effective number of orgs (counting one per cluster within 468 clusters): 323

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317581
YPES377628 ncbi Yersinia pestis Nepal5161
YPES349746 ncbi Yersinia pestis Angola1
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80811
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c1
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80041
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339131
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3061
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106331
VFIS312309 ncbi Vibrio fischeri ES1141
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP1755 Thermoanaerobacter sp.1
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354051
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP94122 ncbi Shewanella sp. ANA-30
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P21
SSED425104 ncbi Shewanella sediminis HAW-EB30
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SONE211586 ncbi Shewanella oneidensis MR-10
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F11
SLOI323850 ncbi Shewanella loihica PV-41
SLAC55218 Ruegeria lacuscaerulensis0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis1
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170291
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1181
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97901
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSTU379731 ncbi Pseudomonas stutzeri A15011
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 231
PPUT76869 ncbi Pseudomonas putida GB-11
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 171
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU205922 ncbi Pseudomonas fluorescens Pf0-11
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PATL342610 ncbi Pseudoalteromonas atlantica T6c1
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM51
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMEN374833 ncbi Neisseria meningitidis 0534421
NMEN272831 ncbi Neisseria meningitidis FAM181
NMEN122587 ncbi Neisseria meningitidis Z24911
NMEN122586 ncbi Neisseria meningitidis MC581
NHAM323097 ncbi Nitrobacter hamburgensis X141
NGON242231 ncbi Neisseria gonorrhoeae FA 10901
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM11
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath1
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT81
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS11
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf41
GOXY290633 ncbi Gluconobacter oxydans 621H0
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25941
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-11
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CSAL290398 ncbi Chromohalobacter salexigens DSM 30431
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJAP155077 Cellvibrio japonicus1
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CAULO ncbi Caulobacter crescentus CB151
CABO218497 ncbi Chlamydophila abortus S26/31
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP232721 ncbi Acidovorax sp. JS421
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K11
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK21
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  EG10264   EG10263   EG10260   EG10259   
ZMOB264203
YPSE349747 YPSIP31758_1578
YPES377628 YPN_2030
YPES349746 YPANGOLA_A2094
YENT393305 YE2621
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492 XF1726
XCAM314565 XC_3952
XCAM190485 XCC3867
XAXO190486 XAC2097
WSUC273121
WPIP955
WPIP80849
VPAR223926 VP1964
VFIS312309 VF2256
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116 TVN0771
TTEN273068 TTE1960
TSP1755 TETH514_1062
TPSE340099 TETH39_0579
TPEN368408 TPEN_0105
TPAL243276
TKOD69014
TELO197221
TDEN326298
TDEN292415
TDEN243275 TDE_0598
TCRU317025
SWOL335541
STOK273063 ST0582
STHE322159 STER_0433
STHE299768 STR0387
STHE264199 STU0387
SSUI391296 SSU98_1807
SSUI391295 SSU05_1803
SSP94122
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057 SSO2455
SSED425104
SSAP342451 SSP0394
SRUB309807 SRU_0045
SPYO370554 MGAS10750_SPY1549
SPYO370553
SPYO370552 MGAS10270_SPY1558
SPYO370551 MGAS9429_SPY1492
SPYO319701 M28_SPY1479
SPYO293653 M5005_SPY1490
SPYO286636 M6_SPY1484
SPYO198466 SPYM3_1523
SPYO193567 SPS0343
SPYO186103 SPYM18_1821
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579 SPEA_2148
SONE211586
SMUT210007
SMAR399550 SMAR_0504
SLOI323850 SHEW_1603
SLAC55218
SHAL458817 SHAL_2119
SHAE279808 SH1683
SGOR29390 SGO_1693
SGLO343509
SFUM335543 SFUM_2603
SEPI176280 SE_0906
SEPI176279 SERP0797
SELO269084
SDEN318161
SBAL402882
SBAL399599
SAGA211110
SAGA208435
SAGA205921
RTYP257363
RSPH349101 RSPH17029_2702
RSPH272943 RSP_4006
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPAL316057 RPD_1544
RMET266264 RMET_3777
RMAS416276
RFER338969 RFER_0321
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820 PTO0671
PTHE370438 PTH_0838
PSTU379731 PST_2263
PSP56811 PSYCPRWF_0582
PSP312153 PNUC_0400
PSP117
PRUM264731 GFRORF0297
PPUT76869 PPUTGB1_4085
PPEN278197
PMUL272843
PMOB403833 PMOB_0517
PMAR93060
PMAR74547 PMT1333
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616 PISL_0413
PINT246198 PIN_0367
PING357804
PHOR70601
PHAL326442
PGIN242619 PG_1239
PFUR186497
PFLU205922 PFL_2213
PDIS435591
PCRY335284 PCRYO_0052
PCAR338963 PCAR_1963
PATL342610 PATL_2122
PAST100379
PARS340102 PARS_1257
PARC259536 PSYC_0044
PAER178306 PAE3001
PACN267747
PABY272844
OTSU357244
OCAR504832 OCAR_4285
NWIN323098 NWI_2684
NSP387092
NSEN222891
NPHA348780 NP1170A
NOCE323261
NMEN374833 NMCC_0298
NMEN272831 NMC0302
NMEN122587 NMA0533
NMEN122586 NMB_1921
NHAM323097 NHAM_3734
NGON242231 NGO2163
NEUT335283
NEUR228410 NE2349
MTUB419947 MRA_2407
MTUB336982 TBFG_12409
MTHE349307
MTHE187420 MTH657
MTBRV RV2384
MTBCDC MT2452
MSYN262723
MSUC221988
MSTA339860
MSED399549 MSED_1527
MPUL272635
MPNE272634
MPET420662 MPE_A0344
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_0327
MMAR426368 MMARC7_1585
MMAR402880 MMARC5_1041
MMAR394221 MMAR10_2654
MMAR368407 MEMAR_2033
MMAR267377 MMP0566
MMAG342108
MLEP272631
MLAB410358
MKAN190192 MK0504
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0141
MGIL350054 MFLV_2691
MGEN243273
MFLO265311
MFLA265072
MCAP340047
MCAP243233 MCA_1883
MBUR259564
MBOV410289 BCG_2398
MBOV233413 MB2405
MBAR269797 MBAR_A3302
MART243272
MAQU351348 MAQU_1593
MAER449447 MAE_60000
MAEO419665
MACE188937 MA2283
LXYL281090
LWEL386043
LSAK314315 LSA1772
LREU557436 LREU_0988
LPNE400673
LPNE297246 LPP2131
LPNE297245
LPNE272624 LPG2179
LPLA220668
LMON265669
LMON169963
LMES203120
LJOH257314
LINT363253 LI0161
LINT267671 LIC_20064
LINT189518 LB082
LINN272626
LHEL405566
LGAS324831
LDEL390333 LDB0903
LDEL321956 LBUL_0821
LCAS321967
LBRE387344
LBOR355277 LBJ_2113
LBOR355276 LBL_0938
LBIF456481 LEPBI_I2590
LBIF355278 LBF_2509
LACI272621
JSP375286
JSP290400 JANN_2979
ILOI283942
IHOS453591 IGNI_1207
HWAL362976 HQ1060A
HSP64091 VNG2537G
HSOM228400
HSOM205914
HSAL478009 OE4562R
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914 HMUK_0202
HMOD498761 HM1_0093
HMAR272569 RRNAC2236
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HBUT415426 HBUT_0063
HARS204773
HACI382638
GURA351605 GURA_1573
GOXY290633
GKAU235909 GK1491
GFOR411154 GFO_1767
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP106370 FRANCCI3_2459
FRANT
FPHI484022
FNUC190304 FN0494
FNOD381764 FNOD_0637
FMAG334413
ERUM302409
ERUM254945
ELIT314225 ELI_00310
EFAE226185 EF_2881
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DRED349161 DRED_2963
DRAD243230
DPSY177439
DOLE96561 DOLE_2084
DNOD246195
DGEO319795 DGEO_2865
DETH243164
DDES207559
DARO159087
CVES412965
CTRA471473 CTLON_0485
CTRA471472 CTL0489
CTET212717
CTEP194439 CT_2116
CSUL444179
CSP78 CAUL_0527
CSAL290398 CSAL_2456
CRUT413404
CPSY167879
CPRO264201
CPNE182082 CPB0305
CPNE138677 CPJ0296
CPNE115713 CPN0296
CPNE115711 CP_0462
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415 NT01CX_0925
CMUR243161 TC_0508
CMIC31964 CMS0951
CMET456442 MBOO_1014
CKOR374847 KCR_0822
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJAP155077 CJA_1871
CHUT269798 CHU_1085
CHOM360107
CGLU196627
CFET360106
CFEL264202 CF0521
CEFF196164 CE2777
CDIP257309
CDIF272563
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941 CCA_00486
CBUR434922
CBUR360115
CBUR227377
CBOT536232 CLM_0373
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402 CBEI_2852
CAULO CC1170
CABO218497 CAB472
BTUR314724
BTRI382640
BTHE226186 BT_3771
BSP107806
BQUI283165
BLON206672
BHER314723
BHEN283166
BGAR290434
BFRA295405 BF4118
BFRA272559 BF3932
BCIC186490
BBUR224326
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP232721 AJS_0918
APLE434271
APLE416269
APHA212042
APER272557 APE2350
ANAE240017
AMAR329726 AM1_A0235
AMAR234826
ALAI441768 ACL_0504
AFER243159
AEHR187272
ADEH290397 ADEH_2748
ACRY349163 ACRY_1692
ACEL351607 ACEL_1192
ABUT367737
ABOR393595 ABO_1784
ABAU360910
ABAC204669 ACID345_0667
AAUR290340 AAUR_0876
AAEO224324 AQ_1716


Organism features enriched in list (features available for 381 out of the 405 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00561697092
Arrangment:Clusters 0.0000540317
Arrangment:Filaments 0.0004242110
Arrangment:Pairs 0.000178357112
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0015474211
Disease:Wide_range_of_infections 0.00882601111
Endospores:No 0.0000848158211
Endospores:Yes 0.00003812153
GC_Content_Range4:0-40 3.324e-13178213
GC_Content_Range4:60-100 1.723e-1161145
GC_Content_Range7:0-30 7.227e-104747
GC_Content_Range7:30-40 4.158e-6131166
GC_Content_Range7:40-50 0.009980186117
GC_Content_Range7:50-60 0.000379955107
GC_Content_Range7:60-70 1.266e-958134
GC_Content_Range7:70-100 0.0090688311
Genome_Size_Range5:0-2 6.974e-30152155
Genome_Size_Range5:2-4 2.529e-6153197
Genome_Size_Range5:4-6 6.441e-2071184
Genome_Size_Range5:6-10 5.651e-16547
Genome_Size_Range9:0-1 7.375e-62727
Genome_Size_Range9:1-2 4.089e-23125128
Genome_Size_Range9:2-3 0.000046196120
Genome_Size_Range9:4-5 0.00013054796
Genome_Size_Range9:5-6 1.931e-152488
Genome_Size_Range9:6-8 5.344e-13438
Genome_Size_Range9:8-10 0.001129719
Habitat:Aquatic 0.00673936991
Habitat:Host-associated 0.0008105151206
Habitat:Multiple 0.000385899178
Habitat:Terrestrial 0.00009251031
Motility:No 0.0062025110151
Motility:Yes 1.583e-6148267
Optimal_temp.:25-30 0.0070036719
Optimal_temp.:37 0.007885179106
Oxygen_Req:Aerobic 0.0063904109185
Oxygen_Req:Anaerobic 3.969e-889102
Oxygen_Req:Facultative 0.0001487112201
Shape:Filament 0.007613917
Shape:Irregular_coccus 0.00599561617
Shape:Rod 4.358e-8197347
Shape:Sphere 0.00278401819
Shape:Spiral 3.060e-73434



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-6374 (vibriobactin biosynthesis)77740.6988
PWY-5901 (2,3-dihydroxybenzoate biosynthesis)1851010.5435
PWY-6196 (serine racemization)102670.4912
PWY0-823 (arginine degradation III (arginine decarboxylase/agmatinase pathway))2451060.4482
GLUTAMINDEG-PWY (glutamine degradation I)191910.4420
GLUCARDEG-PWY (D-glucarate degradation I)152790.4384
PWY-561 (superpathway of glyoxylate cycle)162820.4376
KETOGLUCONMET-PWY (ketogluconate metabolism)103620.4337
GLYOXYLATE-BYPASS (glyoxylate cycle)169830.4277
GLUTDEG-PWY (glutamate degradation II)194900.4263
IDNCAT-PWY (L-idonate degradation)2461030.4219
GALACTITOLCAT-PWY (galactitol degradation)73490.4173
PWY-5148 (acyl-CoA hydrolysis)227970.4115
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)212930.4105



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10263   EG10260   EG10259   
EG102640.9987070.998750.998553
EG102630.9994490.999186
EG102600.999346
EG10259



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PAIRWISE BLAST SCORES:

  EG10264   EG10263   EG10260   EG10259   
EG102640.0f0---
EG10263-0.0f0--
EG10260--0.0f0-
EG10259---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PWY-5901 (2,3-dihydroxybenzoate biosynthesis) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.500, average score: 0.999)
  Genes in pathway or complex:
             0.9990 0.9985 EG10261 (entC) ENTC-MONOMER (isochorismate synthase 1)
   *in cand* 0.9994 0.9988 EG10260 (entB) ENTB-MONOMER (EntB)
   *in cand* 0.9993 0.9986 EG10259 (entA) ENTA-MONOMER (EntA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9987 EG10263 (entE) ENTE-MONOMER (EntE)
   *in cand* 0.9990 0.9986 EG10264 (entF) ENTF-PANT (aryl carrier protein / serine activating enzyme)

- ENTMULTI-CPLX (enterobactin synthase multienzyme complex) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.750, average score: 0.998)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9987 EG10263 (entE) ENTE-MONOMER (EntE)
   *in cand* 0.9990 0.9986 EG10264 (entF) ENTF-PANT (aryl carrier protein / serine activating enzyme)
             0.9973 0.9968 EG10262 (entD) ENTD-MONOMER (phosphopantetheinyl transferase)
   *in cand* 0.9994 0.9988 EG10260 (entB) ENTB-MONOMER (EntB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9986 EG10259 (entA) ENTA-MONOMER (EntA)

- ALL-CHORISMATE-PWY (superpathway of chorismate) (degree of match pw to cand: 0.070, degree of match cand to pw: 1.000, average score: 0.580)
  Genes in pathway or complex:
             0.3097 0.1893 EG10799 (purN) GART-MONOMER (phosphoribosylglycinamide formyltransferase 1)
             0.2232 0.1275 EG11375 (folE) GTP-CYCLOHYDRO-I-MONOMER (GTP cyclohydrolase I monomer)
             0.6335 0.5569 EG11138 (nudB) H2NEOPTERINP3PYROPHOSPHOHYDRO-MONOMER (dihydroneopterin triphosphate pyrophosphohydrolase)
             0.2700 0.1153 EG11673 (folB) H2NEOPTERINALDOL-MONOMER (FolB)
             0.5255 0.3378 EG11374 (folK) H2PTERIDINEPYROPHOSPHOKIN-MONOMER (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase)
             0.4997 0.2361 G6862 (folM) G6862-MONOMER (dihydromonapterin reductase / dihydrofolate reductase)
             0.5805 0.4748 EG10326 (folA) DIHYDROFOLATEREDUCT-MONOMER (dihydrofolate reductase)
             0.6089 0.4607 EG10327 (folC) FOLC-MONOMER (bifunctional folypolyglutamate synthetase / dihydrofolate synthetase)
             0.8677 0.7935 EG10328 (folD) FOLD-MONOMER (FolD)
             0.2684 0.1709 EG10682 (pabA) PABASYN-COMPII-MONOMER (PabA)
             0.6307 0.4990 EG10683 (pabB) PABASYN-COMPI-MONOMER (PabB)
             0.1913 0.1053 EG50011 (folP) H2PTEROATESYNTH-MONOMER (FolP)
             0.8493 0.7616 EG11493 (pabC) ADCLY-MONOMER (pabC)
             0.4201 0.3032 EG11369 (ubiC) CHORPYRLY-MONOMER (chorismate lyase)
             0.4097 0.0732 EG11370 (ubiA) 4OHBENZOATE-OCTAPRENYLTRANSFER-MONOMER (4-hydroxybenzoate octaprenyltransferase)
             0.4501 0.0651 EG11044 (ubiX) UBIX-MONOMER (3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG)
             0.2011 0.0485 EG11396 (ubiD) EG11396-MONOMER (3-octaprenyl-4-hydroxybenzoate carboxy-lyase monomer)
             0.3218 0.1123 EG11476 (ubiB) 2-OCTAPRENYLPHENOL-HYDROX-MONOMER (2-octaprenylphenol hydroxylase)
             0.5741 0.3732 EG11143 (ubiG) DHHB-METHYLTRANSFER-MONOMER (UbiG)
             0.2872 0.0391 EG11324 (ubiH) OCTAPRENYL-METHOXYPHENOL-OH-MONOMER (2-octaprenyl-6-methoxyphenol hydroxylase)
             0.9145 0.8604 G6365 (ubiF) OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-MON (2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase)
             0.3862 0.0979 EG11040 (tyrB) TYRB-MONOMER (TyrB)
             0.5741 0.3069 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.2154 0.1571 EG10707 (pheA) CHORISMUTPREPHENDEHYDRAT-MONOMER (PheA)
             0.1107 0.0409 EG11039 (tyrA) CHORISMUTPREPHENDEHYDROG-MONOMER (TyrA)
             0.2866 0.1475 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.5783 0.4117 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
             0.6722 0.5432 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
             0.3994 0.1507 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
             0.5938 0.3857 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
             0.4948 0.3834 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
             0.4829 0.0807 EG10075 (aroC) AROC-MONOMER (AroC)
             0.6313 0.4900 EG10073 (aroA) AROA-MONOMER (3-phosphoshikimate-1-carboxyvinyltransferase)
             0.6555 0.4317 EG10082 (aroL) AROL-MONOMER (shikimate kinase II)
             0.2700 0.0507 EG10081 (aroK) AROK-MONOMER (shikimate kinase I)
             0.2088 0.0302 EG10077 (aroE) AROE-MONOMER (shikimate dehydrogenase)
             0.2798 0.1335 EG10076 (aroD) AROD-MONOMER (AroD)
             0.3269 0.0471 EG10074 (aroB) AROB-MONOMER (3-dehydroquinate synthase)
             0.9573 0.9182 EG10079 (aroG) AROG-MONOMER (AroG)
             0.7267 0.5385 EG10080 (aroH) AROH-MONOMER (AroH)
             0.4252 0.1936 EG10078 (aroF) AROF-MONOMER (AroF)
             0.2482 0.1205 EG11234 (ydiB) EG11234-MONOMER (YdiB)
             0.9990 0.9985 EG10261 (entC) ENTC-MONOMER (isochorismate synthase 1)
   *in cand* 0.9993 0.9986 EG10259 (entA) ENTA-MONOMER (EntA)
   *in cand* 0.9993 0.9987 EG10263 (entE) ENTE-MONOMER (EntE)
   *in cand* 0.9990 0.9986 EG10264 (entF) ENTF-PANT (aryl carrier protein / serine activating enzyme)
             0.9973 0.9968 EG10262 (entD) ENTD-MONOMER (phosphopantetheinyl transferase)
   *in cand* 0.9994 0.9988 EG10260 (entB) ENTB-MONOMER (EntB)
             0.8864 0.8514 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
             0.6592 0.0501 EG11368 (menB) NAPHTHOATE-SYN-MONOMER (MenB)
             0.4852 0.3071 EG12438 (menH) EG12438-MONOMER ((1R,6R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase)
             0.3566 0.2159 EG10579 (menD) MEND-MONOMER (MenD)
             0.9856 0.9629 EG12362 (menF) MENF-MONOMER (MenF)
             0.3602 0.1588 EG11532 (menC) O-SUCCINYLBENZOATE-COA-SYN-MONOMER (o-succinylbenzoate synthase)
             0.6758 0.3233 EG12437 (menE) O-SUCCINYLBENZOATE-COA-LIG-MONOMER (MenE)
             0.1822 0.0951 EG11880 (menA) DMK-MONOMER (1,4-dihydroxy-2-naphthoate octaprenyltransferase)
             0.3431 0.2269 EG11473 (ubiE) 2-OCTAPRENYL-METHOXY-BENZOQ-METH-MONOMER (bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase)
  All candidate genes found in this pathway
   This pathway has holes

- ENTBACSYN-PWY (enterobactin biosynthesis) (degree of match pw to cand: 0.667, degree of match cand to pw: 1.000, average score: 0.998)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9987 EG10263 (entE) ENTE-MONOMER (EntE)
   *in cand* 0.9990 0.9986 EG10264 (entF) ENTF-PANT (aryl carrier protein / serine activating enzyme)
             0.9973 0.9968 EG10262 (entD) ENTD-MONOMER (phosphopantetheinyl transferase)
   *in cand* 0.9993 0.9986 EG10259 (entA) ENTA-MONOMER (EntA)
   *in cand* 0.9994 0.9988 EG10260 (entB) ENTB-MONOMER (EntB)
             0.9990 0.9985 EG10261 (entC) ENTC-MONOMER (isochorismate synthase 1)
  All candidate genes found in this pathway



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10259 EG10260 EG10263 (centered at EG10260)
EG10264 (centered at EG10264)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10264   EG10263   EG10260   EG10259   
128/623219/623195/623278/623
AAEO224324:0:Tyes---0
AAUR290340:2:Tyes---0
AAVE397945:0:Tyes3053--0
ABAC204669:0:Tyes-0--
ABOR393595:0:Tyes0---
ACAU438753:0:Tyes-1249-0
ACEL351607:0:Tyes-0--
ACRY349163:8:Tyes---0
ADEH290397:0:Tyes---0
AFUL224325:0:Tyes-0372-
AHYD196024:0:Tyes-320
ALAI441768:0:Tyes---0
AMAR329726:8:Tyes0---
AMET293826:0:Tyes--18380
AORE350688:0:Tyes--3400
APER272557:0:Tyes--0-
ASAL382245:5:Tyes-013
ASP1667:3:Tyes330--
ASP232721:2:Tyes--0-
ASP62928:0:Tyes-3079-0
ASP62977:0:Tyes-054
ASP76114:2:Tyes-0-1964
AVAR240292:3:Tyes0--252
BABO262698:0:Tno-210
BAMB339670:3:Tno0151150147
BAMB398577:2:Tno--0-
BAMB398577:3:Tno10261960-0
BAMY326423:0:Tyes0214
BANT260799:0:Tno4230
BANT261594:2:Tno4230
BANT568206:2:Tyes0214
BANT592021:2:Tno4230
BBRO257310:0:Tyes-020472263
BCAN483179:0:Tno-210
BCEN331271:1:Tno-0427-
BCEN331271:2:Tno1043--0
BCEN331272:2:Tyes-4280-
BCEN331272:3:Tyes1019--0
BCER226900:1:Tyes4230
BCER288681:0:Tno4230
BCER315749:1:Tyes4230
BCER405917:1:Tyes4230
BCER572264:1:Tno4230
BCLA66692:0:Tyes-03951744
BFRA272559:1:Tyes---0
BFRA295405:0:Tno---0
BHAL272558:0:Tyes-0-485
BJAP224911:0:Fyes21024048-0
BLIC279010:0:Tyes0214
BMAL243160:0:Tno0---
BMAL243160:1:Tno---0
BMAL320388:0:Tno0---
BMAL320388:1:Tno---0
BMAL320389:0:Tyes0---
BMAL320389:1:Tyes---0
BMEL224914:0:Tno-012
BMEL359391:0:Tno-210
BOVI236:0:Tyes-210
BPAR257311:0:Tno-09182221
BPER257313:0:Tyes-022012095
BPET94624:0:Tyes-369-0
BPSE272560:0:Tyes102801548-
BPSE272560:1:Tyes---0
BPSE320372:0:Tno01682678-
BPSE320372:1:Tno---0
BPSE320373:0:Tno141102145-
BPSE320373:1:Tno---0
BPUM315750:0:Tyes014792043125
BSP36773:1:Tyes-0900-
BSP36773:2:Tyes1105--0
BSP376:0:Tyes-2453-0
BSUB:0:Tyes0214
BSUI204722:0:Tyes-210
BSUI470137:0:Tno-1-0
BTHA271848:0:Tno-0392-
BTHA271848:1:Tno0---
BTHE226186:0:Tyes---0
BTHU281309:1:Tno4230
BTHU412694:1:Tno4230
BVIE269482:6:Tyes--0-
BVIE269482:7:Tyes01051--
BWEI315730:4:Tyes4230
BXEN266265:1:Tyes1462-0728
CABO218497:0:Tyes---0
CACE272562:0:Tyes--0-
CACE272562:1:Tyes---0
CAULO:0:Tyes--0-
CBEI290402:0:Tyes--0-
CBOT536232:0:Tno0---
CCAV227941:1:Tyes---0
CEFF196164:0:Fyes-0--
CFEL264202:1:Tyes---0
CHUT269798:0:Tyes---0
CHYD246194:0:Tyes-10210-
CJAP155077:0:Tyes0---
CJEI306537:0:Tyes-110
CKLU431943:1:Tyes-137023550
CKOR374847:0:Tyes---0
CMAQ397948:0:Tyes--076
CMET456442:0:Tyes--0-
CMIC31964:2:Tyes---0
CMIC443906:2:Tyes-1069
CMUR243161:1:Tyes---0
CNOV386415:0:Tyes---0
CPNE115711:1:Tyes---0
CPNE115713:0:Tno---0
CPNE138677:0:Tno---0
CPNE182082:0:Tno---0
CSAL290398:0:Tyes---0
CSP501479:3:Fyes---0
CSP501479:5:Fyes20--
CSP501479:8:Fyes--0-
CSP78:2:Tyes---0
CTEP194439:0:Tyes---0
CTRA471472:0:Tyes---0
CTRA471473:0:Tno---0
CVIO243365:0:Tyes764210
DGEO319795:0:Tyes---0
DHAF138119:0:Tyes-163-0
DOLE96561:0:Tyes---0
DRED349161:0:Tyes-0--
DSHI398580:5:Tyes-1440-
ECAR218491:0:Tyes1026013
ECOL199310:0:Tno08910
ECOL316407:0:Tno08910
ECOL331111:6:Tno08910
ECOL362663:0:Tno08910
ECOL364106:1:Tno08910
ECOL405955:2:Tyes08910
ECOL409438:6:Tyes08910
ECOL413997:0:Tno08910
ECOL439855:4:Tno08910
ECOL469008:0:Tno11210
ECOL481805:0:Tno10210
ECOL585034:0:Tno08910
ECOL585035:0:Tno08910
ECOL585055:0:Tno08910
ECOL585056:2:Tno08910
ECOL585057:0:Tno08910
ECOL585397:0:Tno08910
ECOL83334:0:Tno08910
ECOLI:0:Tno08910
ECOO157:0:Tno08910
EFAE226185:3:Tyes---0
EFER585054:1:Tyes10210
ELIT314225:0:Tyes-0--
ESP42895:1:Tyes0789
FALN326424:0:Tyes0206715893253
FJOH376686:0:Tyes0--794
FNOD381764:0:Tyes--0-
FNUC190304:0:Tyes---0
FSP106370:0:Tyes0---
FSP1855:0:Tyes02827542151
GFOR411154:0:Tyes---0
GKAU235909:1:Tyes-0--
GMET269799:1:Tyes-449-0
GSUL243231:0:Tyes-0-497
GTHE420246:1:Tyes-1031-0
GURA351605:0:Tyes-0--
GVIO251221:0:Tyes-0-2393
HAUR316274:2:Tyes83340
HBUT415426:0:Tyes--0-
HCHE349521:0:Tyes0269126922701
HMAR272569:8:Tyes--0-
HMOD498761:0:Tyes-0--
HMUK485914:1:Tyes--0-
HSAL478009:4:Tyes--0-
HSP64091:2:Tno--0-
HWAL362976:1:Tyes--0-
IHOS453591:0:Tyes--0-
JSP290400:1:Tyes-0--
KPNE272620:2:Tyes0789
KRAD266940:2:Fyes-2503-0
LBIF355278:2:Tyes---0
LBIF456481:2:Tno---0
LBOR355276:1:Tyes---0
LBOR355277:1:Tno---0
LCHO395495:0:Tyes-01854-
LDEL321956:0:Tyes---0
LDEL390333:0:Tyes---0
LINT189518:0:Tyes---0
LINT267671:0:Tno---0
LINT363253:3:Tyes---0
LLAC272622:5:Tyes--1770
LLAC272623:0:Tyes--1690
LPNE272624:0:Tno0---
LPNE297246:1:Fyes0---
LREU557436:0:Tyes---0
LSAK314315:0:Tyes--0-
LSPH444177:1:Tyes-0-1602
MABS561007:1:Tyes3818195910
MACE188937:0:Tyes--0-
MAER449447:0:Tyes0---
MAQU351348:2:Tyes-0--
MAVI243243:0:Tyes501-
MBAR269797:1:Tyes--0-
MBOV233413:0:Tno-0--
MBOV410289:0:Tno-0--
MCAP243233:0:Tyes0---
MEXT419610:0:Tyes-0878461
MGIL350054:3:Tyes-0--
MHUN323259:0:Tyes--0-
MKAN190192:0:Tyes--0-
MLOT266835:2:Tyes-73302329
MMAR267377:0:Tyes-0--
MMAR368407:0:Tyes---0
MMAR394221:0:Tyes-0--
MMAR402880:1:Tyes-0--
MMAR426368:0:Tyes-0--
MMAR444158:0:Tyes-0--
MPET420662:1:Tyes-0--
MSED399549:0:Tyes--0-
MSME246196:0:Tyes0446444633565
MSP164756:1:Tno-6916900
MSP164757:0:Tno-6746730
MSP189918:2:Tyes-7117100
MSP266779:3:Tyes-0-1965
MSP400668:0:Tyes01456
MSP409:2:Tyes-016662748
MTBCDC:0:Tno-0--
MTBRV:0:Tno-0--
MTHE187420:0:Tyes-0--
MTHE264732:0:Tyes-0-431
MTUB336982:0:Tno-0--
MTUB419947:0:Tyes-0--
MVAN350058:0:Tyes386320332020
MXAN246197:0:Tyes0111013
NARO279238:0:Tyes--0373
NEUR228410:0:Tyes-0--
NFAR247156:2:Tyes25260-2764
NGON242231:0:Tyes---0
NHAM323097:2:Tyes-0--
NMEN122586:0:Tno---0
NMEN122587:0:Tyes---0
NMEN272831:0:Tno---0
NMEN374833:0:Tno---0
NMUL323848:3:Tyes85501164-
NPHA348780:2:Tyes--0-
NSP103690:6:Tyes0--1199
NSP35761:1:Tyes-291-0
NWIN323098:0:Tyes-0--
OANT439375:5:Tyes-637-0
OCAR504832:0:Tyes-0--
OIHE221109:0:Tyes4230
PAER178306:0:Tyes--0-
PAER208963:0:Tyes194101567
PAER208964:0:Tno018261811-
PARC259536:0:Tyes--0-
PARS340102:0:Tyes--0-
PATL342610:0:Tyes---0
PCAR338963:0:Tyes-0--
PCRY335284:1:Tyes--0-
PENT384676:0:Tyes6690-560
PFLU205922:0:Tyes0---
PFLU216595:1:Tyes0--712
PFLU220664:0:Tyes01344--
PGIN242619:0:Tyes---0
PINT246198:0:Tyes---0
PISL384616:0:Tyes--0-
PLUM243265:0:Fyes0857856855
PMAR74547:0:Tyes---0
PMEN399739:0:Tyes1240-18530
PMOB403833:0:Tyes---0
PNAP365044:8:Tyes-0-948
PPRO298386:1:Tyes1320
PPUT160488:0:Tno23941644-0
PPUT351746:0:Tyes0618--
PPUT76869:0:Tno0---
PRUM264731:0:Tyes---0
PSP296591:2:Tyes-163-0
PSP312153:0:Tyes---0
PSP56811:2:Tyes-0--
PSTU379731:0:Tyes---0
PSYR205918:0:Tyes873-0-
PSYR223283:2:Tyes20680374-
PTHE370438:0:Tyes-0--
PTOR263820:0:Tyes--0-
RCAS383372:0:Tyes-1056-0
RDEN375451:4:Tyes-0375-
RETL347834:5:Tyes-0-2752
REUT264198:1:Tyes---0
REUT264198:2:Tyes-0--
REUT381666:1:Tyes10221030-0
RFER338969:1:Tyes-0--
RLEG216596:4:Tyes---0
RLEG216596:6:Tyes-0--
RMET266264:1:Tyes-0--
RPAL258594:0:Tyes-0-4031
RPAL316055:0:Tyes-0-4063
RPAL316056:0:Tyes1016036882449
RPAL316057:0:Tyes-0--
RPAL316058:0:Tyes-9570-
RPOM246200:1:Tyes-6790580
RSOL267608:0:Tyes203-0-
RSP101510:3:Fyes2389246702468
RSP357808:0:Tyes-0-2232
RSPH272943:2:Tyes---0
RSPH349101:2:Tno-0--
RSPH349102:4:Tyes-295-0
RXYL266117:0:Tyes-013512680
SACI330779:0:Tyes--2950
SACI56780:0:Tyes-22730-
SALA317655:1:Tyes-0-2227
SARE391037:0:Tyes04440-693
SAUR158878:1:Tno--14660
SAUR158879:1:Tno--14690
SAUR196620:0:Tno--15050
SAUR273036:0:Tno--14350
SAUR282458:0:Tno--15160
SAUR282459:0:Tno--14190
SAUR359786:1:Tno--14100
SAUR359787:1:Tno--13790
SAUR367830:3:Tno--13930
SAUR418127:0:Tyes--14620
SAUR426430:0:Tno--14530
SAUR93061:0:Fno--17390
SAUR93062:1:Tno--13890
SAVE227882:1:Fyes279702283447
SBOY300268:1:Tyes08910
SCO:2:Fyes751522020070
SDEG203122:0:Tyes-650
SDYS300267:1:Tyes0101112
SENT209261:0:Tno9210
SENT220341:0:Tno0789
SENT295319:0:Tno10210
SENT321314:2:Tno08910
SENT454169:2:Tno08910
SEPI176279:1:Tyes---0
SEPI176280:0:Tno---0
SERY405948:0:Tyes0812811814
SFLE198214:0:Tyes08910
SFLE373384:0:Tno08910
SFUM335543:0:Tyes--0-
SGOR29390:0:Tyes---0
SHAE279808:0:Tyes---0
SHAL458817:0:Tyes---0
SHIGELLA:0:Tno08910
SLOI323850:0:Tyes---0
SMAR399550:0:Tyes--0-
SMED366394:0:Tyes0---
SMED366394:1:Tyes-0-622
SMED366394:2:Tyes--0-
SMEL266834:0:Tyes-53-0
SMEL266834:2:Tyes--0-
SPEA398579:0:Tno---0
SPRO399741:1:Tyes9210
SPYO186103:0:Tno---0
SPYO193567:0:Tno---0
SPYO198466:0:Tno---0
SPYO286636:0:Tno---0
SPYO293653:0:Tno---0
SPYO319701:0:Tyes---0
SPYO370551:0:Tno---0
SPYO370552:0:Tno---0
SPYO370554:0:Tyes---0
SRUB309807:1:Tyes---0
SSAP342451:2:Tyes--0-
SSOL273057:0:Tyes--0-
SSON300269:1:Tyes08910
SSUI391295:0:Tyes---0
SSUI391296:0:Tyes---0
STHE264199:0:Tyes---0
STHE292459:0:Tyes-2495-0
STHE299768:0:Tno---0
STHE322159:2:Tyes---0
STOK273063:0:Tyes--0-
STRO369723:0:Tyes-4-0
STYP99287:1:Tyes08910
TACI273075:0:Tyes--0218
TDEN243275:0:Tyes---0
TERY203124:0:Tyes0--405
TFUS269800:0:Tyes0436
TLET416591:0:Tyes--18440
TMAR243274:0:Tyes--0186
TPEN368408:1:Tyes--0-
TPET390874:0:Tno--0227
TPSE340099:0:Tyes-0--
TROS309801:0:Tyes-8190-
TSP1755:0:Tyes-0--
TSP28240:0:Tyes--2190
TTEN273068:0:Tyes-0--
TTHE262724:0:Tyes---0
TTHE262724:1:Tyes-0608-
TTHE300852:1:Tyes---0
TTHE300852:2:Tyes-11570-
TTUR377629:0:Tyes0156615671568
TVOL273116:0:Tyes--0-
VCHO:0:Tyes-103
VCHO345073:1:Tno-103
VEIS391735:1:Tyes-0-1652
VFIS312309:2:Tyes-0--
VPAR223926:1:Tyes-0--
VVUL196600:1:Tyes-250
VVUL216895:0:Tno-240
XAUT78245:1:Tyes-0-1785
XAXO190486:0:Tyes0---
XCAM190485:0:Tyes0---
XCAM314565:0:Tno0---
XCAM316273:0:Tno0-204-
XCAM487884:0:Tno192-0-
XFAS160492:2:Tno---0
YENT393305:1:Tyes-0--
YPES187410:5:Tno-641-0
YPES214092:3:Tno-293-0
YPES349746:2:Tno-0--
YPES360102:3:Tyes-0-646
YPES377628:2:Tno---0
YPES386656:2:Tno-0-638
YPSE273123:2:Tno-0-880
YPSE349747:2:Tno---0



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