CANDIDATE ID: 1058

CANDIDATE ID: 1058

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9967967e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7424 (ftsB) (b2748)
   Products of gene:
     - G7424-MONOMER (essential cell division protein FtsB)

- EG10810 (pyrG) (b2780)
   Products of gene:
     - CTPSYN-MONOMER (PyrG)
     - CTPSYN-CPLX (CTP synthetase)
       Reactions:
        ATP + UTP + L-glutamine + H2O  ->  ADP + phosphate + CTP + L-glutamate + 3 H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)
         PWY-5687 (pyrimidine ribonucleotides interconversion)

- EG10518 (kdsA) (b1215)
   Products of gene:
     - KDO-8PSYNTH-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate synthase)
     - KDO-8PSYNTH-CPLX (3-deoxy-D-manno-octulosonate 8-phosphate synthase)
       Reactions:
        D-arabinose 5-phosphate + phosphoenolpyruvate + H2O  ->  3-deoxy-D-manno-octulosonate 8-P + phosphate
         In pathways
         LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)
         KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)
         PWY-5111 (PWY-5111)
         PWY-1269 (CMP-KDO biosynthesis I)

- EG10258 (eno) (b2779)
   Products of gene:
     - ENOLASE-MONOMER (Eno)
     - ENOLASE-CPLX (enolase)
       Reactions:
        2-phospho-D-glycerate  =  phosphoenolpyruvate + H2O
         In pathways
         PWY-5464 (PWY-5464)
         PWY-6146 (PWY-6146)
         GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         ANAEROFRUCAT-PWY (ANAEROFRUCAT-PWY)
         P441-PWY (P441-PWY)
         PWY-3801 (PWY-3801)
         NPGLUCAT-PWY (NPGLUCAT-PWY)
         ANARESP1-PWY (respiration (anaerobic))
         PWY-2221 (PWY-2221)
         PWY-1042 (PWY-1042)
         P122-PWY (P122-PWY)
         PWY-1622 (PWY-1622)
         GLUCONEO-PWY (gluconeogenesis I)
         P341-PWY (P341-PWY)
         PWY-6142 (PWY-6142)
         ANAGLYCOLYSIS-PWY (ANAGLYCOLYSIS-PWY)
         GLYCOLYSIS (glycolysis I)
         P124-PWY (P124-PWY)
         PWY-5723 (PWY-5723)
         PWY-5484 (PWY-5484)
     - CPLX0-2381 (degradosome)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 300
Effective number of orgs (counting one per cluster within 468 clusters): 211

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM43
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py23
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB43
TSP1755 Thermoanaerobacter sp.3
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332233
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-23
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148633
SSP94122 ncbi Shewanella sp. ANA-34
SSP84588 ncbi Synechococcus sp. WH 81023
SSP644076 Silicibacter sp. TrichCH4B3
SSP292414 ncbi Ruegeria sp. TM10403
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4193
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB3
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63013
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SACI56780 ncbi Syntrophus aciditrophicus SB3
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170293
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPOM246200 ncbi Ruegeria pomeroyi DSS-33
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RPAL316057 ncbi Rhodopseudomonas palustris BisB53
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL316055 ncbi Rhodopseudomonas palustris BisA533
RPAL258594 ncbi Rhodopseudomonas palustris CGA0093
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38413
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 423
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PMAR74547 ncbi Prochlorococcus marinus MIT 93133
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23803
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8313
OCAR504832 ncbi Oligotropha carboxidovorans OM53
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2553
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X143
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C913
NEUR228410 ncbi Nitrosomonas europaea ATCC 197183
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC13
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS103
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MLOT266835 ncbi Mesorhizobium loti MAFF3030993
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA13
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53343
LSPH444177 ncbi Lysinibacillus sphaericus C3-413
LSAK314315 ncbi Lactobacillus sakei sakei 23K3
LPNE400673 ncbi Legionella pneumophila Corby3
LPNE297246 ncbi Legionella pneumophila Paris3
LPNE297245 ncbi Legionella pneumophila Lens3
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 13
LMON265669 ncbi Listeria monocytogenes 4b F23653
LMON169963 ncbi Listeria monocytogenes EGD-e3
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-003
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1303
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566013
LINN272626 ncbi Listeria innocua Clip112623
LCHO395495 ncbi Leptothrix cholodnii SP-64
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1973
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5503
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)3
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)3
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS13
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HNEP81032 Hyphomonas neptunium3
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf43
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-23
GSUL243231 ncbi Geobacter sulfurreducens PCA3
GOXY290633 ncbi Gluconobacter oxydans 621H3
GMET269799 ncbi Geobacter metallireducens GS-153
GKAU235909 ncbi Geobacillus kaustophilus HTA4263
GFOR411154 ncbi Gramella forsetii KT08033
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough3
DSHI398580 ncbi Dinoroseobacter shibae DFL 123
DRED349161 ncbi Desulfotomaculum reducens MI-13
DOLE96561 ncbi Desulfococcus oleovorans Hxd33
DNOD246195 ncbi Dichelobacter nodosus VCS1703A3
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G203
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124723
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CSP78 Caulobacter sp.3
CSP501479 Citreicella sp. SE453
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)3
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPER289380 ncbi Clostridium perfringens SM1013
CPER195103 ncbi Clostridium perfringens ATCC 131243
CPER195102 ncbi Clostridium perfringens 133
CNOV386415 ncbi Clostridium novyi NT3
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3313
CBUR227377 ncbi Coxiella burnetii RSA 4933
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN4
CBLO203907 ncbi Candidatus Blochmannia floridanus4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CAULO ncbi Caulobacter crescentus CB153
BWEI315730 ncbi Bacillus weihenstephanensis KBAB43
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054763
BTHU412694 ncbi Bacillus thuringiensis Al Hakam3
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-273
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)3
BQUI283165 ncbi Bartonella quintana Toulouse3
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23083
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BHEN283166 ncbi Bartonella henselae Houston-13
BCER572264 ncbi Bacillus cereus 03BB1023
BCER405917 Bacillus cereus W3
BCER315749 ncbi Bacillus cytotoxicus NVH 391-983
BCER288681 ncbi Bacillus cereus E33L3
BCER226900 ncbi Bacillus cereus ATCC 145793
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5833
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)3
BANT592021 ncbi Bacillus anthracis A02483
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor3
BANT260799 ncbi Bacillus anthracis Sterne3
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9413
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3
ACRY349163 ncbi Acidiphilium cryptum JF-53
ACAU438753 ncbi Azorhizobium caulinodans ORS 5713
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAEO224324 ncbi Aquifex aeolicus VF53


Names of the homologs of the genes in the group in each of these orgs
  G7424   EG10810   EG10518   EG10258   
ZMOB264203 ZMO0462ZMO1488ZMO1608
YPSE349747 YPSIP31758_3300YPSIP31758_3317YPSIP31758_2062YPSIP31758_3316
YPSE273123 YPTB0769YPTB0754YPTB2009YPTB0755
YPES386656 YPDSF_2998YPDSF_2982YPDSF_1097YPDSF_2983
YPES377628 YPN_0731YPN_0715YPN_1503YPN_0716
YPES360102 YPA_2781YPA_2875YPA_1405YPA_2874
YPES349746 YPANGOLA_A0965YPANGOLA_A0980YPANGOLA_A2456YPANGOLA_A0979
YPES214092 YPO3362YPO3377YPO2021YPO3376
YPES187410 Y0827Y0813Y2286Y0814
YENT393305 YE0768YE0746YE2427YE0747
XORY360094 XOOORF_1706XOOORF_1702XOOORF_1703XOOORF_1705
XORY342109 XOO2813XOO2817XOO2816XOO2814
XORY291331 XOO2962XOO2967XOO2966XOO2963
XFAS405440 XFASM12_0617XFASM12_0614XFASM12_0615XFASM12_0616
XFAS183190 PD_0544PD_0541PD_0542PD_0543
XFAS160492 XF1292XF1288XF1289XF1291
XCAM487884 XCC-B100_2558XCC-B100_2562XCC-B100_2561XCC-B100_2559
XCAM316273 XCAORF_1937XCAORF_1933XCAORF_1934XCAORF_1936
XCAM314565 XC_2530XC_2534XC_2533XC_2531
XCAM190485 XCC1701XCC1697XCC1698XCC1700
XAXO190486 XAC1720XAC1716XAC1717XAC1719
XAUT78245 XAUT_4200XAUT_4203XAUT_4289
VVUL216895 VV1_1581VV1_1578VV1_0249VV1_1579
VVUL196600 VV2817VV2819VV0935VV2818
VPAR223926 VP2560VP2562VP0747VP2561
VFIS312309 VF2074VF2076VF0772VF2075
VEIS391735 VEIS_2649VEIS_2653VEIS_2652VEIS_2650
VCHO345073 VC0395_A0055VC0395_A2026VC0395_A1752VC0395_A2025
VCHO VC0527VC2448VC2175VC2447
TTUR377629 TERTU_2836TERTU_2851TERTU_2850TERTU_2849
TTEN273068 TTE2609TTE1013TTE1759
TSP1755 TETH514_2304TETH514_1425TETH514_1310
TPSE340099 TETH39_0147TETH39_0984TETH39_0735
TDEN292415 TBD_0622TBD_0619TBD_0620TBD_0621
TCRU317025 TCR_1262TCR_1261TCR_1260
SWOL335541 SWOL_2418SWOL_0363SWOL_0276
STYP99287 STM2931STM2953STM1772STM2952
STHE292459 STH40STH2349STH249
SSP94122 SHEWANA3_1117SHEWANA3_1115SHEWANA3_0775SHEWANA3_1116
SSP84588 SYNW2428OR1041SYNW0180OR2312SYNW2348OR0982
SSP644076 SCH4B_1759SCH4B_1904SCH4B_4319
SSP292414 TM1040_1973TM1040_0653TM1040_0931
SSON300269 SSO_2896SSO_2937SSO_1963SSO_2936
SSED425104 SSED_1291SSED_1289SSED_3450SSED_1290
SPRO399741 SPRO_0825SPRO_0794SPRO_1994SPRO_0795
SPEA398579 SPEA_1186SPEA_1184SPEA_3121SPEA_1185
SONE211586 SO_3439SO_3441SO_3827SO_3440
SMEL266834 SMC01025SMC01027SMC01028
SMED366394 SMED_1069SMED_1071SMED_1072
SLOI323850 SHEW_1206SHEW_1204SHEW_2904SHEW_1205
SHIGELLA S2964PYRGKDSAENO
SHAL458817 SHAL_1223SHAL_1221SHAL_3206SHAL_1222
SGLO343509 SG0525SG0512SG1873SG0513
SFUM335543 SFUM_2075SFUM_2074SFUM_0078
SFLE373384 SFV_2750SFV_2675SFV_1229SFV_2676
SFLE198214 AAN44260.1AAN44283.1AAN42831.1AAN44282.1
SENT454169 SEHA_C3121SEHA_C3150SEHA_C1967SEHA_C3149
SENT321314 SCH_2863SCH_2887SCH_1766SCH_2886
SENT295319 SPA2787SPA2810SPA1101SPA2809
SENT220341 STY3056STY3082STY1897STY3081
SENT209261 T2832T2854T1104T2853
SELO269084 SYC2140_DSYC1811_DSYC0886_C
SDYS300267 SDY_2947SDY_2997SDY_1264SDY_2996
SDEN318161 SDEN_1197SDEN_1195SDEN_0925SDEN_1196
SDEG203122 SDE_1246SDE_1243SDE_1244SDE_1245
SBOY300268 SBO_2772SBO_2661SBO_1852SBO_2660
SBAL402882 SHEW185_3135SHEW185_3137SHEW185_3608SHEW185_3136
SBAL399599 SBAL195_3278SBAL195_3280SBAL195_3731SBAL195_3279
SACI56780 SYN_02922SYN_00950SYN_01733
RSPH349101 RSPH17029_2012RSPH17029_4073RSPH17029_1159
RSOL267608 RSC1130RSC1126RSC1127RSC1129
RRUB269796 RRU_A1887RRU_A1886RRU_A1885
RPOM246200 SPO_1312SPO_0947SPO_2474
RPAL316058 RPB_2790RPB_2784RPB_2778
RPAL316057 RPD_2824RPD_2820RPD_2816
RPAL316056 RPC_2473RPC_2477RPC_2483
RPAL316055 RPE_2595RPE_2601RPE_2607
RPAL258594 RPA2886RPA2879RPA2874
RMET266264 RMET_1056RMET_1052RMET_5733RMET_1055
RLEG216596 RL2511RL2238RL2239
RFER338969 RFER_2651RFER_2648RFER_2649RFER_2650
REUT381666 H16_A1189H16_A1185H16_A1186H16_A1188
REUT264198 REUT_A1092REUT_A1088REUT_A1089REUT_A1091
RETL347834 RHE_CH02184RHE_CH01930RHE_CH01931
RDEN375451 RD1_1906RD1_1661RD1_3142
PSYR223283 PSPTO_1555PSPTO_1552PSPTO_1553PSPTO_1554
PSYR205918 PSYR_1364PSYR_1361PSYR_1362PSYR_1363
PSTU379731 PST_1558PST_1555PST_1556PST_1557
PSP56811 PSYCPRWF_1663PSYCPRWF_1670PSYCPRWF_1668PSYCPRWF_1664
PSP312153 PNUC_0948PNUC_0945PNUC_0946PNUC_0947
PSP296591 BPRO_3185BPRO_3181BPRO_3182BPRO_3184
PPUT76869 PPUTGB1_1167PPUTGB1_1164PPUTGB1_1165PPUTGB1_1166
PPUT351746 PPUT_4164PPUT_4167PPUT_3908PPUT_1850
PPUT160488 PP_1613PP_1610PP_1807PP_1612
PPRO298386 PBPRA3078PBPRA3080PBPRA2841PBPRA3079
PNAP365044 PNAP_1182PNAP_1185PNAP_1184PNAP_1183
PMUL272843 PM1607PM1872PM0558PM1871
PMEN399739 PMEN_3032PMEN_3035PMEN_3034PMEN_3033
PMAR74547 PMT2219PMT1925PMT2083
PLUM243265 PLU0712PLU0912PLU2073PLU0913
PING357804 PING_0671PING_0668PING_1611PING_0669
PHAL326442 PSHAA0683PSHAA0741PSHAA1063PSHAA0742
PFLU220664 PFL_1197PFL_1194PFL_1195PFL_1196
PFLU216595 PFLU1292PFLU1289PFLU1290PFLU1291
PFLU205922 PFL_1122PFL_1119PFL_1120PFL_1121
PENT384676 PSEEN4199PSEEN4202PSEEN4201PSEEN4200
PCRY335284 PCRYO_1869PCRYO_1875PCRYO_1874PCRYO_1870
PCAR338963 PCAR_1945PCAR_1944PCAR_1230
PATL342610 PATL_3856PATL_3265PATL_2205PATL_3266
PARC259536 PSYC_1635PSYC_1641PSYC_1640PSYC_1636
PAER208964 PA3634PA3637PA3636PA3635
PAER208963 PA14_17330PA14_17290PA14_17310PA14_17320
OIHE221109 OB3007OB2227OB2434
OCAR504832 OCAR_6300OCAR_6296OCAR_6292
OANT439375 OANT_2054OANT_2055OANT_2056
NWIN323098 NWI_1833NWI_1831NWI_1827
NOCE323261 NOC_0853NOC_0850NOC_0851NOC_0852
NMUL323848 NMUL_A1229NMUL_A1227NMUL_A1228
NMEN374833 NMCC_1199NMCC_1456NMCC_1196NMCC_1198
NMEN272831 NMC1221NMC1471NMC1218NMC1220
NMEN122587 NMA1496NMA1742NMA1493NMA1495
NMEN122586 NMB_1286NMB_1554NMB_1283NMB_1285
NHAM323097 NHAM_1738NHAM_1739NHAM_1743
NGON242231 NGO0616NGO1212NGO0619NGO0617
NEUT335283 NEUT_2481NEUT_2483NEUT_2482
NEUR228410 NE1043NE1045NE1044
NARO279238 SARO_2017SARO_0726SARO_2223
MSUC221988 MS2276MS0255MS1189MS0256
MSP409 M446_5402M446_4766M446_5894
MSP400668 MMWYL1_1300MMWYL1_1298MMWYL1_1124MMWYL1_1299
MSP266779 MESO_1634MESO_1633MESO_1632
MPET420662 MPE_A2848MPE_B0218MPE_A2846MPE_A2847
MMAR394221 MMAR10_1408MMAR10_1490MMAR10_1413
MMAG342108 AMB1821AMB1822AMB1823
MLOT266835 MLL0606MLR0374MLR0378
MFLA265072 MFLA_1908MFLA_1911MFLA_1910MFLA_1909
MEXT419610 MEXT_4661MEXT_2781MEXT_2784
MCAP243233 MCA_2516MCA_2513MCA_2514MCA_2515
MAQU351348 MAQU_0922MAQU_0919MAQU_0920MAQU_0921
LWEL386043 LWE2509LWE1614LWE2403
LSPH444177 BSPH_0979BSPH_4201BSPH_0468
LSAK314315 LSA1629LSA0893LSA0607
LPNE400673 LPC_1524LPC_0648LPC_0649
LPNE297246 LPP2021LPP1184LPP1185
LPNE297245 LPL2016LPL1190LPL1191
LPNE272624 LPG2038LPG1181LPG1182
LMON265669 LMOF2365_2531LMOF2365_1621LMOF2365_2428
LMON169963 LMO2559LMO1600LMO2455
LINT363253 LI0451LI0452LI0091
LINT267671 LIC_11540LIC_11541LIC_11954
LINT189518 LA2409LA2408LA1951
LINN272626 LIN2704LIN1641LIN2549
LCHO395495 LCHO_1173LCHO_1176LCHO_1175LCHO_1174
LBOR355277 LBJ_1451LBJ_1450LBJ_1561
LBOR355276 LBL_1675LBL_1674LBL_1785
LBIF456481 LEPBI_I1645LEPBI_I1646LEPBI_I1704
LBIF355278 LBF_1595LBF_1596LBF_1652
KPNE272620 GKPORF_B2441GKPORF_B2458GKPORF_B1373GKPORF_B2457
JSP375286 MMA_1271MMA_1269MMA_0532MMA_1270
JSP290400 JANN_3181JANN_3658JANN_1797
ILOI283942 IL0753IL0773IL0920IL0772
HSOM228400 HSM_0506HSM_1668HSM_1421HSM_1613
HSOM205914 HS_1495HS_0552HS_0946HS_0561
HNEP81032 HNE_1794HNE_0806HNE_1980
HINF71421 HI_0673HI_1077HI_1557HI_0932
HINF374930 CGSHIEE_08810CGSHIEE_06690CGSHIEE_05365CGSHIEE_07310
HINF281310 NTHI0795NTHI1238NTHI1576NTHI1103
HHAL349124 HHAL_1436HHAL_1439HHAL_1438HHAL_1437
HDUC233412 HD_1330HD_0373HD_0857HD_0477
HCHE349521 HCH_01868HCH_01865HCH_01866HCH_01867
HARS204773 HEAR2187HEAR2189HEAR0454HEAR2188
GURA351605 GURA_2979GURA_2978GURA_1780
GTHE420246 GTNG_3334GTNG_2716GTNG_3003
GSUL243231 GSU_1895GSU_1894GSU_2286
GOXY290633 GOX2282GOX2281GOX2279
GMET269799 GMET_1276GMET_1277GMET_2372
GKAU235909 GK3389GK2811GK3054
GFOR411154 GFO_2218GFO_2550GFO_2809
GBET391165 GBCGDNIH1_0828GBCGDNIH1_0829GBCGDNIH1_1181
FTUL458234 FTA_1610FTA_1386FTA_1619FTA_1611
FTUL418136 FTW_1531FTW_1708FTW_1542FTW_1532
FTUL401614 FTN_0622FTN_0270FTN_0611FTN_0621
FTUL393115 FTF0710FTF0374CFTF0701FTF0709
FTUL393011 FTH_1476FTH_1283FTH_1485FTH_1477
FTUL351581 FTL_1526FTL_1311FTL_1535FTL_1527
FRANT FTSBPYRGKDSAENO
FPHI484022 FPHI_0220FPHI_0550FPHI_0230FPHI_0221
ESP42895 ENT638_3219ENT638_3234ENT638_2333ENT638_3233
EFER585054 EFER_0320EFER_0284EFER_1746EFER_0285
ECOO157 Z4056PYRGKDSAENO
ECOL83334 ECS3602ECS3640ECS1720ECS3639
ECOL585397 ECED1_3204ECED1_3233ECED1_1363ECED1_3232
ECOL585057 ECIAI39_2937ECIAI39_3199ECIAI39_1551ECIAI39_3198
ECOL585056 ECUMN_3072ECUMN_3111ECUMN_1512ECUMN_3110
ECOL585055 EC55989_3020EC55989_3055EC55989_1311EC55989_3054
ECOL585035 ECS88_3018ECS88_3048ECS88_1283ECS88_3047
ECOL585034 ECIAI1_2849ECIAI1_2888ECIAI1_1236ECIAI1_2887
ECOL481805 ECOLC_0964ECOLC_0932ECOLC_2411ECOLC_0933
ECOL469008 ECBD_0976ECBD_0949ECBD_2406ECBD_0950
ECOL439855 ECSMS35_2873ECSMS35_2918ECSMS35_1927ECSMS35_2917
ECOL413997 ECB_02598ECB_02625ECB_01190ECB_02624
ECOL409438 ECSE_3000ECSE_3038ECSE_1265ECSE_3037
ECOL405955 APECO1_3775APECO1_3750APECO1_332APECO1_3751
ECOL364106 UTI89_C3119UTI89_C3149UTI89_C1409UTI89_C3148
ECOL362663 ECP_2730ECP_2761ECP_1263ECP_2760
ECOL331111 ECE24377A_3049ECE24377A_3084ECE24377A_1363ECE24377A_3083
ECOL316407 ECK2743:JW2718:B2748ECK2774:JW2751:B2780ECK1203:JW1206:B1215ECK2773:JW2750:B2779
ECOL199310 C3315C3345C1674C3344
ECAR218491 ECA3536ECA3567ECA2194ECA3566
DVUL882 DVU_1623DVU_1624DVU_0322
DSHI398580 DSHI_2744DSHI_0583DSHI_2145
DRED349161 DRED_3181DRED_1149DRED_2987
DOLE96561 DOLE_0341DOLE_0511DOLE_0339
DNOD246195 DNO_0360DNO_0361DNO_0362
DDES207559 DDE_1765DDE_1766DDE_0295
DARO159087 DARO_2363DARO_2366DARO_2365DARO_2364
CVIO243365 CV_3460CV_3457CV_2747
CVES412965 COSY_0621COSY_0755COSY_0332
CSP78 CAUL_2765CAUL_1729CAUL_2762
CSP501479 CSE45_0613CSE45_5463CSE45_2022
CSAL290398 CSAL_2639CSAL_0617CSAL_0618CSAL_0619
CRUT413404 RMAG_0674RMAG_0831RMAG_0351
CPSY167879 CPS_1071CPS_4108CPS_3547CPS_4106
CPER289380 CPR_2182CPR_0688CPR_1295
CPER195103 CPF_2472CPF_0687CPF_1505
CPER195102 CPE2208CPE0694CPE1299
CNOV386415 NT01CX_0555NT01CX_0627NT01CX_1414
CKLU431943 CKL_3715CKL_0784CKL_3378
CJAP155077 CJA_2224CJA_2227CJA_2226CJA_2225
CHYD246194 CHY_0125CHY_0475CHY_0284
CBUR434922 COXBU7E912_0328COXBU7E912_0320COXBU7E912_0326
CBUR360115 COXBURSA331_A1864COXBURSA331_A1872COXBURSA331_A1866
CBUR227377 CBU_1673CBU_1682CBU_1675
CBOT508765 CLL_A0476CLL_A3144CLL_A3055
CBLO291272 BPEN_170BPEN_161BPEN_361BPEN_162
CBLO203907 BFL165BFL156BFL350BFL157
CBEI290402 CBEI_0398CBEI_4577CBEI_0602
CAULO CC1720CC1429CC1724
BWEI315730 BCERKBAB4_5136BCERKBAB4_2751BCERKBAB4_4927
BVIE269482 BCEP1808_2185BCEP1808_2188BCEP1808_2187BCEP1808_2186
BTRI382640 BT_0854BT_0855BT_0856
BTHU412694 BALH_4836BALH_2645BALH_4627
BTHU281309 BT9727_5022BT9727_2698BT9727_4814
BTHA271848 BTH_I1895BTH_I1892BTH_I1360BTH_I1894
BSUI470137 BSUIS_A1183BSUIS_A1182BSUIS_A1181
BSUI204722 BR_1134BR_1133BR_1132
BSP376 BRADO4103BRADO4101BRADO4094
BSP36773 BCEP18194_A5412BCEP18194_A5415BCEP18194_C7392BCEP18194_A5413
BSP107806 BU421BU416BU417
BQUI283165 BQ04860BQ04870BQ04880
BPSE320373 BURPS668_2576BURPS668_2579BURPS668_3213BURPS668_2577
BPSE320372 BURPS1710B_A2944BURPS1710B_A2947BURPS1710B_A3535BURPS1710B_A2945
BPSE272560 BPSL2269BPSL2272BPSL2772BPSL2270
BPET94624 BPET1803BPET1800BPET1801BPET1802
BPER257313 BP2385BP2389BP2388BP2386
BPAR257311 BPP3251BPP3255BPP3254BPP3252
BOVI236 GBOORF1136GBOORF1135GBOORF1134
BMEL359391 BAB1_1157BAB1_1156BAB1_1155
BMEL224914 BMEI0849BMEI0850BMEI0851
BMAL320389 BMA10247_1465BMA10247_1468BMA10247_1467BMA10247_1466
BMAL320388 BMASAVP1_A2192BMASAVP1_A2195BMASAVP1_A2194BMASAVP1_A2193
BMAL243160 BMA_1688BMA_1691BMA_1690BMA_1689
BJAP224911 BLL4805BLL4800BLL4794
BHEN283166 BH05700BH05710BH05720
BCER572264 BCA_5488BCA_3029BCA_5246
BCER405917 BCE_5468BCE_2998BCE_5238
BCER315749 BCER98_3859BCER98_2014BCER98_3678
BCER288681 BCE33L5038BCE33L2677BCE33L4824
BCER226900 BC_5338BC_2942BC_5135
BCEN331272 BCEN2424_2106BCEN2424_2109BCEN2424_2108BCEN2424_2107
BCEN331271 BCEN_5971BCEN_5968BCEN_5969BCEN_5970
BCAN483179 BCAN_A1153BCAN_A1152BCAN_A1151
BBRO257310 BB3702BB3706BB3705BB3703
BBAC360095 BARBAKC583_0530BARBAKC583_0531BARBAKC583_0532
BAPH198804 BUSG406BUSG399BUSG400
BANT592021 BAA_5608BAA_3012BAA_5394
BANT568206 BAMEG_5627BAMEG_1645BAMEG_5417
BANT261594 GBAA5583GBAA2958GBAA5364
BANT260799 BAS5187BAS2748BAS4985
BAMB398577 BAMMC406_2016BAMMC406_2019BAMMC406_5913BAMMC406_2017
BAMB339670 BAMB_2143BAMB_2146BAMB_6182BAMB_2144
BABO262698 BRUAB1_1140BRUAB1_1139BRUAB1_1138
ASP76114 EBD109EBA6159EBA6160EBA6162
ASP62977 ACIAD2000ACIAD2003ACIAD2002ACIAD2001
ASP62928 AZO2143AZO2146AZO2145AZO2144
ASP232721 AJS_0996AJS_1000AJS_0999AJS_0997
ASAL382245 ASA_3474ASA_3476ASA_1179ASA_3475
APLE434271 APJL_0806APJL_0137APJL_2091APJL_1132
APLE416269 APL_0801APL_0136APL_2040APL_1113
AHYD196024 AHA_0822AHA_0820AHA_3145AHA_0821
AFER243159 AFE_2191AFE_2194AFE_2193AFE_2192
AEHR187272 MLG_1838MLG_1841MLG_1840MLG_1839
ADEH290397 ADEH_4174ADEH_4173ADEH_1642
ACRY349163 ACRY_1238ACRY_1239ACRY_0167
ACAU438753 AZC_3067AZC_3064AZC_3061
ABOR393595 ABO_1165ABO_1162ABO_1163ABO_1164
ABAU360910 BAV1167BAV1165BAV2851BAV1166
ABAC204669 ACID345_3670ACID345_3669ACID345_1070
AAVE397945 AAVE_1321AAVE_1327AAVE_1326AAVE_1322
AAEO224324 AQ_1334AQ_085AQ_484


Organism features enriched in list (features available for 282 out of the 300 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00294573392
Endospores:No 2.734e-1951211
GC_Content_Range4:0-40 1.739e-1361213
GC_Content_Range4:40-60 4.773e-6134224
GC_Content_Range4:60-100 0.000412887145
GC_Content_Range7:0-30 0.00004921047
GC_Content_Range7:30-40 3.017e-851166
GC_Content_Range7:50-60 6.252e-1080107
GC_Content_Range7:60-70 0.000012786134
GC_Content_Range7:70-100 0.0067694111
Genome_Size_Range5:0-2 3.577e-2324155
Genome_Size_Range5:4-6 2.185e-20140184
Genome_Size_Range9:0-1 0.0008360527
Genome_Size_Range9:1-2 3.867e-1919128
Genome_Size_Range9:2-3 0.000354142120
Genome_Size_Range9:3-4 0.00569804777
Genome_Size_Range9:4-5 6.909e-76896
Genome_Size_Range9:5-6 2.332e-127288
Genome_Size_Range9:6-8 0.00200722738
Gram_Stain:Gram_Neg 2.928e-31229333
Gram_Stain:Gram_Pos 5.594e-1631150
Habitat:Host-associated 0.004225186206
Habitat:Multiple 0.0000303108178
Habitat:Specialized 0.00003851253
Motility:No 3.540e-1434151
Motility:Yes 4.675e-13172267
Optimal_temp.:- 0.0001716145257
Optimal_temp.:25-30 7.353e-71919
Optimal_temp.:30-37 0.0041249318
Optimal_temp.:35-37 0.00006861313
Optimal_temp.:37 0.001445338106
Oxygen_Req:Aerobic 0.0015747105185
Oxygen_Req:Anaerobic 1.379e-726102
Oxygen_Req:Facultative 0.0009709114201
Pathogenic_in:Animal 0.00004014766
Shape:Coccobacillus 0.00030611111
Shape:Coccus 1.023e-91582
Shape:Rod 4.779e-22224347
Shape:Sphere 0.0004454219
Temp._range:Hyperthermophilic 0.0002924323
Temp._range:Mesophilic 0.0002217245473
Temp._range:Thermophilic 0.0000128535



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 215
Effective number of orgs (counting one per cluster within 468 clusters): 186

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.1
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSP1148 ncbi Synechocystis sp. PCC 68031
SSOL273057 ncbi Sulfolobus solfataricus P20
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SMAR399550 ncbi Staphylothermus marinus F10
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR146891 ncbi Prochlorococcus marinus AS96011
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293281
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E881
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4111
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40181


Names of the homologs of the genes in the group in each of these orgs
  G7424   EG10810   EG10518   EG10258   
WPIP955 WD_0468
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TSP28240 TRQ2_0592
TPET390874 TPET_0577
TPEN368408
TPAL243276
TMAR243274 TM_0343
TLET416591
TKOD69014 TK0268
TERY203124 TERY_4537
TELO197221 TLL0768
TDEN326298 TMDEN_0401
TDEN243275 TDE_0949
TACI273075
STRO369723
STOK273063
STHE322159 STER_0684
STHE299768 STR0635
STHE264199 STU0635
SSUI391296 SSU98_1513
SSUI391295
SSP387093 SUN_1920
SSP321332 CYB_1478
SSP321327 CYA_1479
SSP1148 SLL1443
SSOL273057
SRUB309807
SPYO293653
SPYO286636 M6_SPY1618
SMAR399550
SERY405948
SCO SCO3096
SAVE227882 SAV3533
SARE391037
SAGA211110 GBS0608
SAGA208435 SAG_0628
SAGA205921 SAK_0713
SACI330779
RXYL266117 RXYL_0728
RTYP257363 RT0070
RSP357808 ROSERS_3115
RSP101510
RSAL288705 RSAL33209_0332
RRIC452659 RRIOWA_0115
RRIC392021 A1G_00560
RPRO272947 RP062
RMAS416276 RMA_0097
RFEL315456 RF_0113
RCON272944 RC0090
RCAS383372 RCAS_2963
RCAN293613 A1E_00290
RBEL391896 A1I_00825
RBEL336407 RBE_1345
RALB246199
RAKA293614 A1C_00485
PTOR263820
PPEN278197 PEPE_0462
PMOB403833 PMOB_1204
PMAR93060 P9215_19621
PMAR74546 PMT9312_1782
PMAR59920 PMN2A_1291
PMAR167546
PMAR167542
PMAR167540 PMM1689
PMAR146891 A9601_18991
PLUT319225 PLUT_2053
PISL384616
PHOR70601
PFUR186497
PAST100379 PAM284
PARS340102
PAER178306
PACN267747 PPA1390
PABY272844
OTSU357244
NSP35761 NOCA_2485
NSEN222891
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_1762
MMAR426368 MMARC7_0141
MMAR402880 MMARC5_0701
MMAR368407
MMAR267377 MMP0893
MLEP272631
MLAB410358
MKAN190192 MK0205
MJAN243232 MJ_1174
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047 MCAP_0213
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447 MAE_14480
MAEO419665
MACE188937
MABS561007
LXYL281090
LREU557436 LREU_0230
LPLA220668 LP_0792
LLAC272623 L0007
LLAC272622 LACR_0668
LJOH257314 LJ_0875
LHEL405566
LGAS324831 LGAS_1305
LDEL390333
LDEL321956
LCAS321967 LSEI_0970
LBRE387344 LVIS_0664
LACI272621
KRAD266940
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0003
HPYL357544 HPAG1_0003
HPY HP0003
HMUK485914
HMAR272569
HHEP235279 HH_0039
HBUT415426
HACI382638 HAC_0256
GVIO251221 GLR1524
FSUC59374 FSU2325
FSP1855
FSP106370
FNOD381764
FMAG334413 FMG_0789
FALN326424
ERUM302409
ERUM254945
EFAE226185 EF_1961
ECHA205920
ECAN269484
DRAD243230 DR_2637
DGEO319795 DGEO_0004
CTRA471473 CTLON_0024
CTRA471472 CTL0024
CTET212717 CTC_00382
CTEP194439 CT_0088
CSUL444179
CPRO264201 PC0362
CPNE182082 CPB0749
CPNE138677 CPJ0721
CPNE115713 CPN0721
CPNE115711 CP_0025
CMUR243161 TC_0025
CMIC443906 CMM_1983
CMIC31964 CMS1249
CMET456442
CMAQ397948
CKOR374847
CJEI306537 JK0871
CGLU196627
CFEL264202 CF0985
CEFF196164 CE1042
CDIP257309
CCHL340177 CAG_1974
CCAV227941 CCA_00021
CABO218497 CAB021
BXEN266265
BTUR314724
BLON206672
BHER314723
BGAR290434
BBUR224326 BB_0337
BAPH372461 BCC_264
BAFZ390236
AYEL322098 AYWB_437
AURANTIMONAS
APHA212042
APER272557
ANAE240017
AMAR234826
ALAI441768 ACL_0402
AFUL224325
ACEL351607 ACEL_1243
ABUT367737 ABU_1845


Organism features enriched in list (features available for 203 out of the 215 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.001172989
Arrangment:Filaments 0.0038723810
Arrangment:Pairs 0.000293524112
Disease:Pharyngitis 0.000197288
Disease:bronchitis_and_pneumonitis 0.000197288
Endospores:No 1.052e-10109211
Endospores:Yes 0.0001623753
GC_Content_Range4:0-40 0.000127594213
GC_Content_Range4:40-60 0.000678061224
GC_Content_Range7:0-30 0.00018362847
GC_Content_Range7:50-60 0.000030820107
GC_Content_Range7:70-100 0.00016491011
Genome_Size_Range5:0-2 4.442e-23105155
Genome_Size_Range5:4-6 5.691e-1623184
Genome_Size_Range9:0-1 4.357e-72227
Genome_Size_Range9:1-2 2.280e-1583128
Genome_Size_Range9:3-4 0.00757771877
Genome_Size_Range9:4-5 1.457e-81196
Genome_Size_Range9:5-6 1.127e-61288
Genome_Size_Range9:6-8 0.0046063638
Gram_Stain:Gram_Neg 1.869e-1571333
Gram_Stain:Gram_Pos 0.001979166150
Habitat:Host-associated 0.008968983206
Habitat:Multiple 1.783e-638178
Habitat:Specialized 0.00001293353
Motility:No 5.205e-675151
Motility:Yes 1.184e-1155267
Optimal_temp.:- 0.000199470257
Optimal_temp.:30-37 0.0039306118
Optimal_temp.:37 0.000154653106
Oxygen_Req:Anaerobic 0.000890949102
Oxygen_Req:Facultative 0.000157751201
Pathogenic_in:Animal 0.00219061366
Pathogenic_in:Human 0.009426063213
Pathogenic_in:No 0.001754494226
Pathogenic_in:Swine 0.004955155
Salinity:Extreme_halophilic 0.007825267
Shape:Irregular_coccus 5.756e-61517
Shape:Rod 4.723e-1184347
Shape:Sphere 9.114e-61619
Temp._range:Hyperthermophilic 1.970e-72023
Temp._range:Mesophilic 0.0000505147473
Temp._range:Thermophilic 0.00033292235



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462200.6673
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002470.6593
PWY-1269 (CMP-KDO biosynthesis I)3252570.6463
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181970.6198
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951810.6034
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862310.6013
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482600.5979
PWY-5918 (heme biosynthesis I)2722230.5960
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912320.5915
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392540.5854
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962330.5819
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251950.5795
PWY-4041 (γ-glutamyl cycle)2792240.5792
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902270.5626
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491440.5441
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831650.5422
TYRFUMCAT-PWY (tyrosine degradation I)1841650.5380
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552030.5240
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162770.5230
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911670.5227
PWY-5913 (TCA cycle variation IV)3012260.5211
PWY-5386 (methylglyoxal degradation I)3052270.5149
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222780.5139
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982660.4972
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292320.4734
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262300.4696
PWY-5028 (histidine degradation II)1301220.4696
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911590.4670
DAPLYSINESYN-PWY (lysine biosynthesis I)3422370.4668
PWY-5340 (sulfate activation for sulfonation)3852560.4668
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761500.4656
PROSYN-PWY (proline biosynthesis I)4752900.4625
AST-PWY (arginine degradation II (AST pathway))1201140.4579
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652440.4450
PWY-5194 (siroheme biosynthesis)3122190.4418
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561340.4366
PWY0-501 (lipoate biosynthesis and incorporation I)3852510.4338
PWY-5938 ((R)-acetoin biosynthesis I)3762470.4330
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491850.4269
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491850.4269
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112160.4256
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96940.4251
REDCITCYC (TCA cycle variation II)1741430.4240
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002100.4214
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)1121040.4189
PWY-5148 (acyl-CoA hydrolysis)2271720.4185
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582780.4183
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2892040.4176
PWY-6389 ((S)-acetoin biosynthesis)3682410.4168
ARO-PWY (chorismate biosynthesis I)5102950.4120
GLYOXYLATE-BYPASS (glyoxylate cycle)1691380.4091
VALDEG-PWY (valine degradation I)2902030.4080
PWY-46 (putrescine biosynthesis III)1381190.4065
KDOSYN-PWY (KDO transfer to lipid IVA I)1801440.4063
LIPASYN-PWY (phospholipases)2121620.4062
PWY0-862 (cis-dodecenoyl biosynthesis)3432280.4058
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791430.4033
PWY-561 (superpathway of glyoxylate cycle)1621330.4027



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10810   EG10518   EG10258   
G74240.9996920.9993820.99979
EG108100.9997220.999855
EG105180.999637
EG10258



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PAIRWISE BLAST SCORES:

  G7424   EG10810   EG10518   EG10258   
G74240.0f0---
EG10810-0.0f0--
EG10518--0.0f0-
EG10258---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10258 EG10810 (centered at EG10810)
EG10518 (centered at EG10518)
G7424 (centered at G7424)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7424   EG10810   EG10518   EG10258   
188/623416/623380/623408/623
AAEO224324:0:Tyes-8790287
AAUR290340:2:Tyes-381-0
AAVE397945:0:Tyes0651
ABAC204669:0:Tyes-261726160
ABAU360910:0:Tyes2016901
ABOR393595:0:Tyes3012
ABUT367737:0:Tyes--0-
ACAU438753:0:Tyes-630
ACEL351607:0:Tyes-0--
ACRY349163:8:Tyes-106910700
ADEH290397:0:Tyes-255425530
AEHR187272:0:Tyes0321
AFER243159:0:Tyes0321
AHYD196024:0:Tyes2022731
ALAI441768:0:Tyes---0
AMAR329726:9:Tyes-7100-
AMET293826:0:Tyes-0-3315
AORE350688:0:Tyes--4420
APLE416269:0:Tyes66501945977
APLE434271:0:Tno63801972964
ASAL382245:5:Tyes2199220102200
ASP1667:3:Tyes-380-0
ASP232721:2:Tyes0321
ASP62928:0:Tyes0321
ASP62977:0:Tyes0321
ASP76114:2:Tyes3012
AVAR240292:3:Tyes-14110-
AYEL322098:4:Tyes---0
BABO262698:1:Tno-210
BAMB339670:1:Tno--0-
BAMB339670:3:Tno03-1
BAMB398577:1:Tno--0-
BAMB398577:3:Tno03-1
BAMY326423:0:Tyes-304-0
BANT260799:0:Tno-244802245
BANT261594:2:Tno-243902236
BANT568206:2:Tyes-386403657
BANT592021:2:Tno-254002329
BAPH198804:0:Tyes60-1
BAPH372461:0:Tyes---0
BBAC264462:0:Tyes-01345-
BBAC360095:0:Tyes-012
BBRO257310:0:Tyes0431
BBUR224326:21:Fno---0
BCAN483179:1:Tno-210
BCEN331271:0:Tno3012
BCEN331272:3:Tyes0321
BCER226900:1:Tyes-233902141
BCER288681:0:Tno-237202159
BCER315749:1:Tyes-175901588
BCER405917:1:Tyes-235902142
BCER572264:1:Tno-239802159
BCIC186490:0:Tyes-1-0
BCLA66692:0:Tyes-864-0
BFRA272559:1:Tyes--0196
BFRA295405:0:Tno--0170
BHAL272558:0:Tyes-236-0
BHEN283166:0:Tyes-012
BJAP224911:0:Fyes-1160
BLIC279010:0:Tyes-293-0
BMAL243160:1:Tno0321
BMAL320388:1:Tno0321
BMAL320389:1:Tyes0321
BMEL224914:1:Tno-012
BMEL359391:1:Tno-210
BOVI236:1:Tyes-210
BPAR257311:0:Tno0431
BPER257313:0:Tyes0431
BPET94624:0:Tyes3012
BPSE272560:1:Tyes035141
BPSE320372:1:Tno035761
BPSE320373:1:Tno036011
BPUM315750:0:Tyes-306-0
BQUI283165:0:Tyes-012
BSP107806:2:Tyes50-1
BSP36773:0:Tyes--0-
BSP36773:2:Tyes03-1
BSP376:0:Tyes-970
BSUB:0:Tyes-327-0
BSUI204722:1:Tyes-210
BSUI470137:1:Tno-210
BTHA271848:1:Tno5195160518
BTHE226186:0:Tyes--0253
BTHU281309:1:Tno-230902101
BTHU412694:1:Tno-211301912
BTRI382640:1:Tyes-012
BVIE269482:7:Tyes0321
BWEI315730:4:Tyes-236002152
CABO218497:0:Tyes--0-
CACE272562:1:Tyes-2184-0
CAULO:0:Tyes-2910295
CBEI290402:0:Tyes-04102203
CBLO203907:0:Tyes901921
CBLO291272:0:Tno901961
CBOT36826:1:Tno-0-95
CBOT441770:0:Tyes-0-96
CBOT441771:0:Tno-0-96
CBOT441772:1:Tno-0-98
CBOT498213:1:Tno-0-102
CBOT508765:1:Tyes-026342545
CBOT515621:2:Tyes-0-99
CBOT536232:0:Tno-0-96
CBUR227377:1:Tyes092-
CBUR360115:1:Tno082-
CBUR434922:2:Tno806-
CCAV227941:1:Tyes--0-
CCHL340177:0:Tyes--0-
CCON360104:2:Tyes-16670-
CCUR360105:0:Tyes-15620-
CDES477974:0:Tyes-1838-0
CDIF272563:1:Tyes--01351
CEFF196164:0:Fyes---0
CFEL264202:1:Tyes--0-
CFET360106:0:Tyes-4060-
CHOM360107:1:Tyes-760-
CHUT269798:0:Tyes--0531
CHYD246194:0:Tyes-0336159
CJAP155077:0:Tyes0321
CJEI306537:0:Tyes-0--
CJEJ192222:0:Tyes-0330-
CJEJ195099:0:Tno-0398-
CJEJ354242:2:Tyes-0342-
CJEJ360109:0:Tyes-01434-
CJEJ407148:0:Tno-0337-
CKLU431943:1:Tyes-288602567
CMIC31964:2:Tyes-0--
CMIC443906:2:Tyes-0--
CMUR243161:1:Tyes--0-
CNOV386415:0:Tyes-152515970
CPEL335992:0:Tyes-01-
CPER195102:1:Tyes-15300605
CPER195103:0:Tno-17490811
CPER289380:3:Tyes-14680603
CPHY357809:0:Tyes-0-2652
CPNE115711:1:Tyes--0-
CPNE115713:0:Tno--0-
CPNE138677:0:Tno--0-
CPNE182082:0:Tno--0-
CPRO264201:0:Fyes--0-
CPSY167879:0:Tyes0294924072947
CRUT413404:0:Tyes-3024390
CSAL290398:0:Tyes2062012
CSP501479:1:Fyes--0-
CSP501479:8:Fyes-0-1387
CSP78:2:Tyes-103801035
CTEP194439:0:Tyes--0-
CTET212717:0:Tyes---0
CTRA471472:0:Tyes--0-
CTRA471473:0:Tno--0-
CVES412965:0:Tyes-2774060
CVIO243365:0:Tyes7367330-
DARO159087:0:Tyes0321
DDES207559:0:Tyes-149014910
DETH243164:0:Tyes--0123
DGEO319795:1:Tyes---0
DHAF138119:0:Tyes-106-0
DNOD246195:0:Tyes-012
DOLE96561:0:Tyes-21740
DPSY177439:2:Tyes-10-
DRAD243230:3:Tyes---0
DRED349161:0:Tyes-205001857
DSHI398580:5:Tyes-219001588
DSP216389:0:Tyes--7390
DSP255470:0:Tno--7560
DVUL882:1:Tyes-129612970
ECAR218491:0:Tyes1371140201401
ECOL199310:0:Tno1615164401643
ECOL316407:0:Tno1539157001569
ECOL331111:6:Tno1615164801647
ECOL362663:0:Tno1471150201501
ECOL364106:1:Tno1706173601735
ECOL405955:2:Tyes1586161201611
ECOL409438:6:Tyes1765180301802
ECOL413997:0:Tno1411143801437
ECOL439855:4:Tno9219660965
ECOL469008:0:Tno27014461
ECOL481805:0:Tno32014801
ECOL585034:0:Tno1592162801627
ECOL585035:0:Tno1666169301692
ECOL585055:0:Tno1691172401723
ECOL585056:2:Tno1570160601605
ECOL585057:0:Tno1370164701646
ECOL585397:0:Tno1778180601805
ECOL83334:0:Tno1931196901968
ECOLI:0:Tno1579161101610
ECOO157:0:Tno1889192701926
EFAE226185:3:Tyes---0
EFER585054:1:Tyes31014421
ELIT314225:0:Tyes-147-0
ESP42895:1:Tyes9039180917
FJOH376686:0:Tyes--31760
FMAG334413:1:Tyes---0
FNUC190304:0:Tyes--15890
FPHI484022:1:Tyes0342111
FRANT:0:Tno3080299307
FSUC59374:0:Tyes-0--
FTUL351581:0:Tno1910200192
FTUL393011:0:Tno1510160152
FTUL393115:0:Tyes3050296304
FTUL401614:0:Tyes3480338347
FTUL418136:0:Tno0150101
FTUL458234:0:Tno1680178169
GBET391165:0:Tyes-01353
GFOR411154:0:Tyes-0332591
GKAU235909:1:Tyes-5960260
GMET269799:1:Tyes-011109
GOXY290633:5:Tyes-320
GSUL243231:0:Tyes-10392
GTHE420246:1:Tyes-6120287
GURA351605:0:Tyes-120212010
GVIO251221:0:Tyes-0--
HACI382638:1:Tyes--0-
HARS204773:0:Tyes1629163101630
HAUR316274:2:Tyes-02448-
HCHE349521:0:Tyes6012
HDUC233412:0:Tyes832041993
HHAL349124:0:Tyes0321
HHEP235279:0:Tyes--0-
HINF281310:0:Tyes0392692278
HINF374930:0:Tyes6092290337
HINF71421:0:Tno0395869257
HMOD498761:0:Tyes-245-0
HNEP81032:0:Tyes-97101153
HPY:0:Tno--0-
HPYL357544:1:Tyes--0-
HPYL85963:0:Tno--0-
HSOM205914:1:Tyes94203949
HSOM228400:0:Tno011779251122
ILOI283942:0:Tyes02016719
JSP290400:1:Tyes-140618900
JSP375286:0:Tyes7537510752
KPNE272620:2:Tyes1043106001059
LBIF355278:2:Tyes-0157
LBIF456481:2:Tno-0159
LBOR355276:1:Tyes-10106
LBOR355277:1:Tno-10108
LBRE387344:2:Tyes---0
LCAS321967:1:Tyes---0
LCHO395495:0:Tyes0321
LGAS324831:0:Tyes---0
LINN272626:1:Tno-11100955
LINT189518:1:Tyes-4634620
LINT267671:1:Tno-01405
LINT363253:3:Tyes-3583590
LJOH257314:0:Tyes---0
LLAC272622:5:Tyes---0
LLAC272623:0:Tyes---0
LMES203120:1:Tyes--5420
LMON169963:0:Tno-10110906
LMON265669:0:Tyes-9000798
LPLA220668:0:Tyes---0
LPNE272624:0:Tno85501-
LPNE297245:1:Fno82701-
LPNE297246:1:Fyes84301-
LPNE400673:0:Tno86001-
LREU557436:0:Tyes-0--
LSAK314315:0:Tyes-10352840
LSPH444177:1:Tyes-52635980
LWEL386043:0:Tyes-8950789
MAER449447:0:Tyes-0--
MAQU351348:2:Tyes3012
MCAP243233:0:Tyes3012
MCAP340047:0:Tyes---0
MEXT419610:0:Tyes-187203
MFLA265072:0:Tyes0321
MJAN243232:2:Tyes-0--
MKAN190192:0:Tyes-0--
MLOT266835:2:Tyes-19803
MMAG342108:0:Tyes-012
MMAR267377:0:Tyes-0--
MMAR394221:0:Tyes-0825
MMAR402880:1:Tyes-0--
MMAR426368:0:Tyes-0--
MMAR444158:0:Tyes-0--
MPET420662:0:Tyes-0--
MPET420662:1:Tyes2-01
MSP266779:3:Tyes-210
MSP400668:0:Tyes1741720173
MSP409:2:Tyes-63301098
MSUC221988:0:Tyes208609691
MTHE264732:0:Tyes-2090-0
MXAN246197:0:Tyes-10-
NARO279238:0:Tyes-131101519
NEUR228410:0:Tyes02-1
NEUT335283:2:Tyes02-1
NGON242231:0:Tyes052731
NHAM323097:2:Tyes-015
NMEN122586:0:Tno325902
NMEN122587:0:Tyes324502
NMEN272831:0:Tno321202
NMEN374833:0:Tno325602
NMUL323848:3:Tyes20-1
NOCE323261:1:Tyes3012
NSP103690:6:Tyes-19730-
NSP35761:1:Tyes-0--
NSP387092:0:Tyes-01241-
NWIN323098:0:Tyes-640
OANT439375:5:Tyes-012
OCAR504832:0:Tyes-840
OIHE221109:0:Tyes-7840210
PACN267747:0:Tyes-0--
PAER208963:0:Tyes3012
PAER208964:0:Tno0321
PARC259536:0:Tyes0651
PAST100379:0:Tyes---0
PATL342610:0:Tyes1672108401085
PCAR338963:0:Tyes-7287270
PCRY335284:1:Tyes0651
PDIS435591:0:Tyes--02052
PENT384676:0:Tyes0321
PFLU205922:0:Tyes3012
PFLU216595:1:Tyes3012
PFLU220664:0:Tyes3012
PGIN242619:0:Tyes--074
PHAL326442:1:Tyes05738458
PING357804:0:Tyes308911
PINT246198:1:Tyes--170
PLUM243265:0:Fyes02001401201
PLUT319225:0:Tyes--0-
PMAR146891:0:Tyes-0--
PMAR167539:0:Tyes-1658-0
PMAR167540:0:Tyes-0--
PMAR167555:0:Tyes-1912-0
PMAR59920:0:Tno-0--
PMAR74546:0:Tyes-0--
PMAR74547:0:Tyes-2970160
PMAR93060:0:Tyes-0--
PMEN399739:0:Tyes0321
PMOB403833:0:Tyes--0-
PMUL272843:1:Tyes1049131401313
PNAP365044:8:Tyes0321
PPEN278197:0:Tyes---0
PPRO298386:2:Tyes2372390238
PPUT160488:0:Tno301962
PPUT351746:0:Tyes2323232620630
PPUT76869:0:Tno3012
PRUM264731:0:Tyes--0634
PSP117:0:Tyes-30080-
PSP296591:2:Tyes4013
PSP312153:0:Tyes3012
PSP56811:2:Tyes0751
PSTU379731:0:Tyes3012
PSYR205918:0:Tyes3012
PSYR223283:2:Tyes3012
PTHE370438:0:Tyes-12270-
RAKA293614:0:Fyes--0-
RBEL336407:0:Tyes--0-
RBEL391896:0:Fno--0-
RCAN293613:0:Fyes--0-
RCAS383372:0:Tyes-0--
RCON272944:0:Tno--0-
RDEN375451:4:Tyes-23301384
RETL347834:5:Tyes-25101
REUT264198:3:Tyes4013
REUT381666:2:Tyes4013
RFEL315456:2:Tyes--0-
RFER338969:1:Tyes3012
RLEG216596:6:Tyes-26501
RMAS416276:1:Tyes--0-
RMET266264:1:Tyes--0-
RMET266264:2:Tyes40-3
RPAL258594:0:Tyes-1250
RPAL316055:0:Tyes-0612
RPAL316056:0:Tyes-0410
RPAL316057:0:Tyes-840
RPAL316058:0:Tyes-1260
RPOM246200:1:Tyes-35501492
RPRO272947:0:Tyes--0-
RRIC392021:0:Fno--0-
RRIC452659:0:Tyes--0-
RRUB269796:1:Tyes-210
RSAL288705:0:Tyes---0
RSOL267608:1:Tyes4013
RSP357808:0:Tyes-0--
RSPH272943:4:Tyes-904-0
RSPH349101:0:Tno--0-
RSPH349101:2:Tno-861-0
RSPH349102:3:Tyes--0-
RSPH349102:5:Tyes---0
RTYP257363:0:Tno--0-
RXYL266117:0:Tyes--0-
SACI56780:0:Tyes-1665520
SAGA205921:0:Tno---0
SAGA208435:0:Tno---0
SAGA211110:0:Tyes---0
SALA317655:1:Tyes-650-0
SAUR158878:1:Tno-1397-0
SAUR158879:1:Tno-1296-0
SAUR196620:0:Tno-1361-0
SAUR273036:0:Tno-1285-0
SAUR282458:0:Tno-1382-0
SAUR282459:0:Tno-1335-0
SAUR359786:1:Tno-1390-0
SAUR359787:1:Tno-1357-0
SAUR367830:3:Tno-1265-0
SAUR418127:0:Tyes-1387-0
SAUR426430:0:Tno-1331-0
SAUR93061:0:Fno-1531-0
SAUR93062:1:Tno-1249-0
SAVE227882:1:Fyes---0
SBAL399599:3:Tyes024611
SBAL402882:1:Tno024771
SBOY300268:1:Tyes8667630762
SCO:2:Fyes---0
SDEG203122:0:Tyes3012
SDEN318161:0:Tyes2732710272
SDYS300267:1:Tyes1583163001629
SELO269084:0:Tyes-12929570
SENT209261:0:Tno1643166501664
SENT220341:0:Tno1065108701086
SENT295319:0:Tno1618163701636
SENT321314:2:Tno1117114101140
SENT454169:2:Tno1108113701136
SEPI176279:1:Tyes-1261-0
SEPI176280:0:Tno-1211-0
SFLE198214:0:Tyes1469149201491
SFLE373384:0:Tno1437136401365
SFUM335543:0:Tyes-197719760
SGLO343509:3:Tyes13013951
SGOR29390:0:Tyes-315-0
SHAE279808:0:Tyes-0-1242
SHAL458817:0:Tyes2020461
SHIGELLA:0:Tno1410143201431
SLAC55218:1:Fyes--0562
SLOI323850:0:Tyes2017621
SMED366394:3:Tyes-023
SMEL266834:2:Tyes-023
SMUT210007:0:Tyes-0-1074
SONE211586:1:Tyes023831
SPEA398579:0:Tno2020241
SPNE1313:0:Tyes-0-572
SPNE170187:0:Tyes-16-0
SPNE171101:0:Tno-0-603
SPNE487213:0:Tno-0-590
SPNE487214:0:Tno-0-590
SPNE488221:0:Tno-0-600
SPRO399741:1:Tyes31012271
SPYO160490:0:Tno-939-0
SPYO186103:0:Tno-990-0
SPYO193567:0:Tno-0-1157
SPYO198466:0:Tno-1153-0
SPYO286636:0:Tno-0--
SPYO319701:0:Tyes-1070-0
SPYO370551:0:Tno-1017-0
SPYO370552:0:Tno-1077-0
SPYO370553:0:Tno-1029-0
SPYO370554:0:Tyes-1040-0
SSAP342451:2:Tyes-0-1196
SSED425104:0:Tyes2022471
SSON300269:1:Tyes8929300929
SSP1131:0:Tyes--02299
SSP1148:0:Tyes-0--
SSP292414:2:Tyes-13400284
SSP321327:0:Tyes-0--
SSP321332:0:Tyes-0--
SSP387093:0:Tyes--0-
SSP644076:5:Fyes---0
SSP644076:7:Fyes-0143-
SSP64471:0:Tyes-125-0
SSP84588:0:Tyes-229202211
SSP94122:1:Tyes3493470348
SSUI391296:0:Tyes---0
STHE264199:0:Tyes---0
STHE292459:0:Tyes-02382209
STHE299768:0:Tno---0
STHE322159:2:Tyes---0
STYP99287:1:Tyes1154117601175
SWOL335541:0:Tyes-2083790
TCRU317025:0:Tyes-210
TDEN243275:0:Tyes---0
TDEN292415:0:Tyes3012
TDEN326298:0:Tyes--0-
TELO197221:0:Tyes-0--
TERY203124:0:Tyes--0-
TFUS269800:0:Tyes-1610-
TKOD69014:0:Tyes--0-
TMAR243274:0:Tyes--0-
TPET390874:0:Tno--0-
TPSE340099:0:Tyes-0819575
TROS309801:1:Tyes-7480-
TSP1755:0:Tyes-9651120
TSP28240:0:Tyes--0-
TTEN273068:0:Tyes-14960701
TTHE262724:1:Tyes--01178
TTHE300852:2:Tyes--8290
TTUR377629:0:Tyes0141312
VCHO:0:Tyes0194216551941
VCHO345073:1:Tno0192216631921
VEIS391735:1:Tyes0431
VFIS312309:2:Tyes1328133001329
VPAR223926:1:Tyes1842184401843
VVUL196600:2:Tyes1907190901908
VVUL216895:1:Tno1291128901290
WPIP955:0:Tyes-0--
WSUC273121:0:Tyes-063-
XAUT78245:1:Tyes-0391
XAXO190486:0:Tyes4013
XCAM190485:0:Tyes4013
XCAM314565:0:Tno0431
XCAM316273:0:Tno4013
XCAM487884:0:Tno0431
XFAS160492:2:Tno4013
XFAS183190:1:Tyes3012
XFAS405440:0:Tno3012
XORY291331:0:Tno0541
XORY342109:0:Tyes0431
XORY360094:0:Tno8026
YENT393305:1:Tyes20016131
YPES187410:5:Tno12014741
YPES214092:3:Tno1275128901288
YPES349746:2:Tno015145414
YPES360102:3:Tyes1392148601485
YPES377628:2:Tno1608071
YPES386656:2:Tno1910189401895
YPSE273123:2:Tno15012711
YPSE349747:2:Tno1222123901238
ZMOB264203:0:Tyes-010541181



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