CANDIDATE ID: 1078

CANDIDATE ID: 1078

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9961767e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG12015 (pbpG) (b2134)
   Products of gene:
     - EG12015-MONOMER (penicillin-binding protein 7)
       Reactions:
        peptidoglycan D-alanyl-DAP crosslink + H2O  =  peptidoglycan tetrapeptide, glycan chain 2 + peptidoglycan tetrapeptide, glycan chain 1

- EG11893 (dacD) (b2010)
   Products of gene:
     - RPOA-MONOMER (DD-carboxypeptidase, penicillin-binding protein 6b)
       Reactions:
        a lipid II + H2O  =  a N-acetylglucosamine--N-acetylmuramyl-(tetrapeptide) pyrophosphoryl-undecaprenol + D-alanine

- EG10203 (dacC) (b0839)
   Products of gene:
     - EG10203-MONOMER (penicillin-binding protein 6)
       Reactions:
        a lipid II + H2O  =  a N-acetylglucosamine--N-acetylmuramyl-(tetrapeptide) pyrophosphoryl-undecaprenol + D-alanine

- EG10201 (dacA) (b0632)
   Products of gene:
     - EG10201-MONOMER (D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5)
       Reactions:
        a beta-lactam + H2O  ->  a substituted beta-amino acid
        a lipid II + H2O  =  a N-acetylglucosamine--N-acetylmuramyl-(tetrapeptide) pyrophosphoryl-undecaprenol + D-alanine



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 298
Effective number of orgs (counting one per cluster within 468 clusters): 210

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM43
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula13
XFAS160492 ncbi Xylella fastidiosa 9a5c3
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
XAUT78245 ncbi Xanthobacter autotrophicus Py24
WPIP955 Wolbachia pipientis3
WPIP80849 Wolbachia endosymbiont of Brugia malayi3
VVUL216895 ncbi Vibrio vulnificus CMCP63
VVUL196600 ncbi Vibrio vulnificus YJ0163
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106333
VFIS312309 ncbi Vibrio fischeri ES1143
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B3
SSP292414 ncbi Ruegeria sp. TM10403
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB33
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003453
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-43
SLAC55218 Ruegeria lacuscaerulensis3
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB43
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT183
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty23
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SACI56780 ncbi Syntrophus aciditrophicus SB3
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170293
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.13
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPOM246200 ncbi Ruegeria pomeroyi DSS-33
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RPAL316057 ncbi Rhodopseudomonas palustris BisB53
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL316055 ncbi Rhodopseudomonas palustris BisA533
RPAL258594 ncbi Rhodopseudomonas palustris CGA0093
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm703
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO13
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1253
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PATL342610 ncbi Pseudoalteromonas atlantica T6c3
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM53
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2553
NOCE323261 ncbi Nitrosococcus oceani ATCC 197073
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X143
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124443
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC13
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS103
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MLOT266835 ncbi Mesorhizobium loti MAFF3030993
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA13
MCAP243233 ncbi Methylococcus capsulatus Bath3
MAQU351348 ncbi Marinobacter aquaeolei VT84
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LCHO395495 ncbi Leptothrix cholodnii SP-64
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS13
ILOI283942 ncbi Idiomarina loihiensis L2TR3
HSOM205914 ncbi Haemophilus somnus 129PT3
HNEP81032 Hyphomonas neptunium3
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL13
HDUC233412 ncbi Haemophilus ducreyi 35000HP3
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GOXY290633 ncbi Gluconobacter oxydans 621H3
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-003
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL401614 ncbi Francisella novicida U1123
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL393011 ncbi Francisella tularensis holarctica OSU183
FTUL351581 Francisella tularensis holarctica FSC2003
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas3
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
ECAN269484 ncbi Ehrlichia canis Jake3
DSHI398580 ncbi Dinoroseobacter shibae DFL 123
DRED349161 ncbi Desulfotomaculum reducens MI-14
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CTET212717 ncbi Clostridium tetani E883
CSP501479 Citreicella sp. SE453
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H3
CPER289380 ncbi Clostridium perfringens SM1013
CPER195103 ncbi Clostridium perfringens ATCC 131243
CPER195102 ncbi Clostridium perfringens 133
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10623
CNOV386415 ncbi Clostridium novyi NT3
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CDIF272563 ncbi Clostridium difficile 6304
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3313
CBUR227377 ncbi Coxiella burnetii RSA 4933
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto4
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBOT498213 ncbi Clostridium botulinum B1 str. Okra4
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054763
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1684
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BQUI283165 ncbi Bartonella quintana Toulouse3
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BHEN283166 ncbi Bartonella henselae Houston-14
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1003
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL033
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
APHA212042 ncbi Anaplasma phagocytophilum HZ3
AORE350688 ncbi Alkaliphilus oremlandii OhILAs3
AMET293826 ncbi Alkaliphilus metalliredigens QYMF3
AMAR234826 ncbi Anaplasma marginale St. Maries3
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ACRY349163 ncbi Acidiphilium cryptum JF-53
ACAU438753 ncbi Azorhizobium caulinodans ORS 5713
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  EG12015   EG11893   EG10203   EG10201   
ZMOB264203 ZMO1089ZMO1089ZMO1089
YPSE349747 YPSIP31758_2806YPSIP31758_2952YPSIP31758_2659YPSIP31758_2952
YPSE273123 YPTB1217YPTB1094YPTB1351YPTB1351
YPES386656 YPDSF_2520YPDSF_2652YPDSF_2376YPDSF_2652
YPES377628 YPN_2801YPN_1086YPN_2659YPN_2659
YPES360102 YPA_0887YPA_2498YPA_2498YPA_2498
YPES349746 YPANGOLA_A1352YPANGOLA_A1852YPANGOLA_A1549YPANGOLA_A1852
YPES214092 YPO1176YPO2601YPO1320YPO2601
YPES187410 Y3013Y1175Y2864Y1175
YENT393305 YE2884YE3005YE1471YE3005
XORY360094 XOOORF_0937XOOORF_0937XOOORF_0937
XORY342109 XOO3734XOO3734XOO3734
XORY291331 XOO3956XOO3956XOO3956
XFAS405440 XFASM12_1430XFASM12_1430XFASM12_1430
XFAS183190 PD_1277PD_1277PD_1277
XFAS160492 XF2230XF2230XF2230
XCAM487884 XCC-B100_0741XCC-B100_0741XCC-B100_0741
XCAM316273 XCAORF_3796XCAORF_3796XCAORF_3796
XCAM314565 XC_0708XC_0708XC_0708
XCAM190485 XCC3456XCC3456XCC3456
XAXO190486 XAC0664XAC0664XAC0664
XAUT78245 XAUT_4539XAUT_4324XAUT_4324XAUT_4324
WPIP955 WD_0098WD_0098WD_0098
WPIP80849 WB_0447WB_0447WB_0447
VVUL216895 VV1_0281VV1_0281VV1_0281
VVUL196600 VV0903VV0903VV0903
VPAR223926 VP0719VP0719VP0719
VFIS312309 VF0745VF0745VF0745
VEIS391735 VEIS_3625VEIS_1254VEIS_1254VEIS_1254
VCHO345073 VC0395_0368VC0395_A0470VC0395_A0470VC0395_A0470
VCHO VCA0870VC0947VC0947VC0947
TTUR377629 TERTU_0608TERTU_0608TERTU_0608TERTU_0608
TTEN273068 TTE1328TTE1314TTE1314TTE1314
TSP1755 TETH514_1575TETH514_1556TETH514_1556TETH514_1556
TPSE340099 TETH39_1138TETH39_1119TETH39_1119TETH39_1119
TDEN292415 TBD_0083TBD_0647TBD_0647TBD_0647
TCRU317025 TCR_1635TCR_1635TCR_1635TCR_1635
SWOL335541 SWOL_0909SWOL_0612SWOL_0612SWOL_0612
STYP99287 STM2168STM2062STM0863STM0637
STHE292459 STH1815STH2587STH2587STH2587
SSP94122 SHEWANA3_3292SHEWANA3_0991SHEWANA3_0991SHEWANA3_0991
SSP644076 SCH4B_0494SCH4B_0494SCH4B_0494
SSP292414 TM1040_3590TM1040_3590TM1040_3590
SSON300269 SSO_2191SSO_2080SSO_0586SSO_0586
SSED425104 SSED_3489SSED_3489SSED_3489
SPRO399741 SPRO_1352SPRO_2636SPRO_1628SPRO_1628
SPEA398579 SPEA_3153SPEA_3153SPEA_3153
SONE211586 SO_0999SO_1164SO_1164SO_1164
SMEL266834 SMC00068SMC01188SMC01188SMC01188
SMED366394 SMED_0506SMED_1293SMED_1293SMED_1293
SLOI323850 SHEW_2939SHEW_2939SHEW_2939
SLAC55218 SL1157_3306SL1157_3306SL1157_3306
SHIGELLA PBPGDACADACADACA
SHAL458817 SHAL_3238SHAL_3238SHAL_3238
SGLO343509 SG0921SG0795SG0921SG0795
SFUM335543 SFUM_4061SFUM_1305SFUM_1305SFUM_1305
SFLE373384 SFV_2210SFV_0694SFV_0694SFV_0694
SFLE198214 AAN43742.1AAN42285.1AAN42422.1AAN42285.1
SENT454169 SEHA_C2402SEHA_C2285SEHA_C0996SEHA_C0753
SENT321314 SCH_2184SCH_2071SCH_0857SCH_0666
SENT295319 SPA0683SPA2097SPA1899SPA2097
SENT220341 STY0688STY0896STY0688
SENT209261 T2230T2033T2230
SDYS300267 SDY_2154SDY_2233SDY_0841SDY_0554
SDEN318161 SDEN_1095SDEN_0851SDEN_0851SDEN_0851
SDEG203122 SDE_3337SDE_3337SDE_3337SDE_3337
SBOY300268 SBO_1010SBO_0496SBO_0496SBO_0496
SBAL402882 SHEW185_0957SHEW185_3321SHEW185_3321SHEW185_3321
SBAL399599 SBAL195_0992SBAL195_3457SBAL195_3457SBAL195_3457
SACI56780 SYN_02260SYN_02260SYN_02260
RSPH349102 RSPH17025_1237RSPH17025_1237RSPH17025_0542
RSPH349101 RSPH17029_2201RSPH17029_2201RSPH17029_2343
RSPH272943 RSP_0550RSP_0688RSP_0688
RSOL267608 RSC1609RSC0327RSC0327RSC0327
RRUB269796 RRU_A1704RRU_A1704RRU_A1704
RPOM246200 SPO_2739SPO_2739SPO_2739
RPAL316058 RPB_2678RPB_2678RPB_2678
RPAL316057 RPD_2714RPD_2714RPD_2714
RPAL316056 RPC_2702RPC_2702RPC_2702
RPAL316055 RPE_2864RPE_2864RPE_2864
RPAL258594 RPA2774RPA2774RPA2774
RMET266264 RMET_1204RMET_0225RMET_0225RMET_0225
RLEG216596 RL1016RL2477RL2477RL1016
RFER338969 RFER_2346RFER_0920RFER_0920RFER_0920
REUT381666 H16_A1386H16_A0302H16_A0302H16_A0302
REUT264198 REUT_A0280REUT_A0280REUT_A0280REUT_A0280
RETL347834 RHE_CH00944RHE_CH02161RHE_CH02161RHE_CH00944
RDEN375451 RD1_3465RD1_3465RD1_3465
PTHE370438 PTH_1223PTH_1223PTH_1223PTH_1223
PSYR223283 PSPTO_2681PSPTO_4821PSPTO_4821PSPTO_4821
PSYR205918 PSYR_2414PSYR_4361PSYR_4361PSYR_4361
PSTU379731 PST_0030PST_3777PST_3777PST_3777
PSP56811 PSYCPRWF_1428PSYCPRWF_1758PSYCPRWF_1758PSYCPRWF_1758
PSP296591 BPRO_2323BPRO_0250BPRO_0250BPRO_0250
PPUT76869 PPUTGB1_2122PPUTGB1_4856PPUTGB1_4856PPUTGB1_4856
PPUT351746 PPUT_1976PPUT_4678PPUT_4678PPUT_4678
PPUT160488 PP_3794PP_4803PP_4803PP_4803
PPRO298386 PBPRA1875PBPRA2893PBPRA2893PBPRA2893
PNAP365044 PNAP_1722PNAP_0197PNAP_0197PNAP_0197
PMUL272843 PM1927PM1927PM1927
PMEN399739 PMEN_0066PMEN_3794PMEN_3794PMEN_3794
PLUM243265 PLU1294PLU1573PLU1294
PING357804 PING_3027PING_3027PING_3027PING_3027
PHAL326442 PSHAA1022PSHAA1022PSHAA1022
PFLU220664 PFL_3993PFL_5448PFL_5448PFL_5448
PFLU216595 PFLU3932PFLU5419PFLU5419PFLU5419
PFLU205922 PFL_3700PFL_4966PFL_4966PFL_4966
PENT384676 PSEEN3218PSEEN4822PSEEN4822PSEEN4822
PCRY335284 PCRYO_0678PCRYO_0658PCRYO_0658PCRYO_0658
PATL342610 PATL_1556PATL_1556PATL_1556
PARC259536 PSYC_0704PSYC_0687PSYC_0687PSYC_0687
PAER208964 PA0869PA3999PA3999PA3999
PAER208963 PA14_53020PA14_12100PA14_12100PA14_12100
OIHE221109 OB1826OB1842OB1842OB1842
OCAR504832 OCAR_6128OCAR_6128OCAR_6128
OANT439375 OANT_2076OANT_2076OANT_2076
NWIN323098 NWI_1465NWI_1465NWI_1465
NOCE323261 NOC_2632NOC_2632NOC_2632
NMUL323848 NMUL_A2296NMUL_A1991NMUL_A1991NMUL_A1991
NMEN374833 NMCC_0713NMCC_0839NMCC_0839NMCC_0839
NMEN272831 NMC0703NMC0818NMC0818NMC0818
NMEN122587 NMA0962NMA1095NMA1095NMA1095
NMEN122586 NMB_0749NMB_0877NMB_0877NMB_0877
NHAM323097 NHAM_2011NHAM_2011NHAM_2011
NGON242231 NGO0327NGO0443NGO0443NGO0443
NEUT335283 NEUT_0761NEUT_0761NEUT_0761NEUT_0761
NEUR228410 NE1485NE1485NE1485NE1485
NARO279238 SARO_1942SARO_1942SARO_1942
MTHE264732 MOTH_1499MOTH_1357MOTH_1499
MSUC221988 MS0850MS1829MS1829MS1829
MSP409 M446_6277M446_6277M446_6277
MSP400668 MMWYL1_2844MMWYL1_2844MMWYL1_2844MMWYL1_2844
MSP266779 MESO_1580MESO_1580MESO_1580
MPET420662 MPE_A2100MPE_A0311MPE_A0311MPE_A0311
MMAR394221 MMAR10_1455MMAR10_1455MMAR10_1455
MMAG342108 AMB2451AMB2451AMB2451
MLOT266835 MLL0426MLL0426MLL0426
MFLA265072 MFLA_0226MFLA_2497MFLA_2497MFLA_2497
MEXT419610 MEXT_2917MEXT_2917MEXT_2917
MCAP243233 MCA_0105MCA_0105MCA_0105
MAQU351348 MAQU_3604MAQU_2410MAQU_2410MAQU_2410
LPNE400673 LPC_0928LPC_0928LPC_0928LPC_0928
LPNE297246 LPP1466LPP1466LPP1466LPP1466
LPNE297245 LPL1517LPL1517LPL1517LPL1517
LPNE272624 LPG1509LPG1509LPG1509LPG1509
LCHO395495 LCHO_2887LCHO_4237LCHO_4237LCHO_4237
KPNE272620 GKPORF_B1855GKPORF_B1730GKPORF_B5308GKPORF_B5088
JSP375286 MMA_0731MMA_3248MMA_3248MMA_3248
JSP290400 JANN_1278JANN_1278JANN_1278
ILOI283942 IL0957IL0957IL0957
HSOM205914 HS_0318HS_0318HS_0318
HNEP81032 HNE_1814HNE_1814HNE_1814
HMOD498761 HM1_0318HM1_0318HM1_0318HM1_0318
HINF71421 HI_0364HI_0029HI_0029HI_0029
HINF374930 CGSHIEE_01190CGSHIEE_03165CGSHIEE_03165CGSHIEE_03165
HINF281310 NTHI0483NTHI0036NTHI0036NTHI0036
HHAL349124 HHAL_1012HHAL_1012HHAL_1012
HDUC233412 HD_2016HD_2016HD_2016
HCHE349521 HCH_01289HCH_05839HCH_05839HCH_05839
HARS204773 HEAR0817HEAR2999HEAR2999HEAR2999
GTHE420246 GTNG_2242GTNG_2242GTNG_2242GTNG_2242
GOXY290633 GOX0019GOX0019GOX0019
GKAU235909 GK2311GK2311GK2311GK2311
GBET391165 GBCGDNIH1_1072GBCGDNIH1_1072GBCGDNIH1_1072
FTUL458234 FTA_1119FTA_1119FTA_1119
FTUL418136 FTW_0936FTW_0936FTW_0936
FTUL401614 FTN_0907FTN_0907FTN_0907
FTUL393115 FTF1029FTF1029FTF1029
FTUL393011 FTH_1036FTH_1036FTH_1036
FTUL351581 FTL_1060FTL_1060FTL_1060
FRANT DACDDACDDACD
FPHI484022 FPHI_1708FPHI_1708FPHI_1708
ESP42895 ENT638_2734ENT638_2578ENT638_1330ENT638_1167
EFER585054 EFER_2221EFER_2473EFER_0980EFER_2473
ECOO157 PBPGDACDDACCDACA
ECOL83334 ECS3021ECS2812ECS0919ECS0670
ECOL585397 ECED1_2578ECED1_2361ECED1_0803ECED1_0628
ECOL585057 ECIAI39_0862ECIAI39_1006ECIAI39_0818ECIAI39_0607
ECOL585056 ECUMN_2468ECUMN_2356ECUMN_1029ECUMN_0725
ECOL585055 EC55989_2384EC55989_2269EC55989_0884EC55989_0624
ECOL585035 ECS88_2278ECS88_2109ECS88_0856ECS88_0673
ECOL585034 ECIAI1_2212ECIAI1_2080ECIAI1_0878ECIAI1_0615
ECOL481805 ECOLC_1513ECOLC_1630ECOLC_2803ECOLC_3013
ECOL469008 ECBD_1524ECBD_1647ECBD_2784ECBD_3019
ECOL439855 ECSMS35_0910ECSMS35_1051ECSMS35_0866ECSMS35_0652
ECOL413997 ECB_02064ECB_01913ECB_00806ECB_00601
ECOL409438 ECSE_2402ECSE_2283ECSE_0897ECSE_0699
ECOL405955 APECO1_4415APECO1_1108APECO1_1254APECO1_1423
ECOL364106 UTI89_C2408UTI89_C0634UTI89_C0842UTI89_C0634
ECOL362663 ECP_2173ECP_2054ECP_0853ECP_0662
ECOL331111 ECE24377A_2424ECE24377A_2301ECE24377A_0910ECE24377A_0657
ECOL316407 ECK2127:JW5355:B2134ECK2004:JW5329:B2010ECK0829:JW0823:B0839ECK0625:JW0627:B0632
ECOL199310 C2665C2538C0924C0722
ECHA205920 ECH_1067ECH_1067ECH_1067
ECAR218491 ECA2792ECA1300ECA2686ECA1300
ECAN269484 ECAJ_0859ECAJ_0859ECAJ_0859
DSHI398580 DSHI_0923DSHI_0923DSHI_0923
DRED349161 DRED_1102DRED_1102DRED_1102DRED_1102
DNOD246195 DNO_0899DNO_0899DNO_0899DNO_0899
DHAF138119 DSY2507DSY2305DSY2305DSY2305
DARO159087 DARO_0667DARO_0291DARO_0291DARO_0291
CVIO243365 CV_3153CV_3094CV_3094CV_3094
CVES412965 COSY_0433COSY_0433COSY_0433COSY_0433
CTET212717 CTC_01525CTC_01530CTC_01530
CSP501479 CSE45_2687CSE45_2687CSE45_2687
CSAL290398 CSAL_1549CSAL_1549CSAL_1549CSAL_1549
CRUT413404 RMAG_0470RMAG_0470RMAG_0470RMAG_0470
CPSY167879 CPS_1712CPS_1712CPS_1712
CPER289380 CPR_1770CPR_1775CPR_1775
CPER195103 CPF_2056CPF_2061CPF_2061
CPER195102 CPE1801CPE1806CPE1806
CPEL335992 SAR11_0998SAR11_0998SAR11_0998
CNOV386415 NT01CX_0071NT01CX_2026NT01CX_2026
CKLU431943 CKL_1259CKL_1253CKL_1253
CJAP155077 CJA_0793CJA_0793CJA_0793CJA_0793
CHYD246194 CHY_1962CHY_1962CHY_1962CHY_1962
CDIF272563 CD2141CD1291CD1291CD1291
CDES477974 DAUD_1398DAUD_1398DAUD_1398DAUD_1227
CBUR434922 COXBU7E912_1345COXBU7E912_1345COXBU7E912_1345
CBUR360115 COXBURSA331_A1408COXBURSA331_A1408COXBURSA331_A1408
CBUR227377 CBU_1261CBU_1261CBU_1261
CBOT536232 CLM_2013CLM_2020CLM_2020CLM_2020
CBOT515621 CLJ_B2026CLJ_B2032CLJ_B2032CLJ_B2032
CBOT508765 CLL_A2367CLL_A2367CLL_A2367
CBOT498213 CLD_2787CLD_2781CLD_2781CLD_2781
CBOT441772 CLI_1855CLI_1861CLI_1861CLI_1861
CBOT441771 CLC_1796CLC_1802CLC_1802CLC_1802
CBOT441770 CLB_1789CLB_1795CLB_1795CLB_1795
CBOT36826 CBO1853CBO1859CBO1859CBO1859
CBEI290402 CBEI_0519CBEI_1874CBEI_1874
CACE272562 CAC1267CAC2063CAC2063CAC2063
BWEI315730 BCERKBAB4_3906BCERKBAB4_3906BCERKBAB4_3906BCERKBAB4_3906
BVIE269482 BCEP1808_2212BCEP1808_2989BCEP1808_2989BCEP1808_2989
BTRI382640 BT_1164BT_1164BT_1164
BTHU412694 BALH_3693BALH_3693BALH_3693BALH_3693
BTHU281309 BT9727_3816BT9727_3816BT9727_3816BT9727_3816
BTHA271848 BTH_I1868BTH_I0380BTH_I0380BTH_I0380
BSUI470137 BSUIS_A1116BSUIS_A1035BSUIS_A1035BSUIS_A1035
BSUI204722 BR_1072BR_0991BR_0991BR_0991
BSUB BSU23480BSU23480BSU23480BSU23480
BSP376 BRADO3826BRADO3826BRADO3826
BSP36773 BCEP18194_A5439BCEP18194_A6236BCEP18194_A6236BCEP18194_A6236
BQUI283165 BQ06120BQ06120BQ06120
BPUM315750 BPUM_2079BPUM_2079BPUM_2079BPUM_2079
BPSE320373 BURPS668_2608BURPS668_0438BURPS668_0438BURPS668_0438
BPSE320372 BURPS1710B_A2973BURPS1710B_A0662BURPS1710B_A0662BURPS1710B_A0662
BPSE272560 BPSL2297BPSL0408BPSL0408BPSL0408
BPET94624 BPET3557BPET3320BPET4807BPET3320
BPER257313 BP1545BP0102BP0102BP0102
BPAR257311 BPP1216BPP0166BPP0166BPP0166
BOVI236 GBOORF0988GBOORF0988GBOORF0988
BMEL359391 BAB1_1094BAB1_1010BAB1_1010BAB1_1010
BMEL224914 BMEI0990BMEI0990BMEI0990
BMAL320389 BMA10247_1498BMA10247_3192BMA10247_3192BMA10247_3192
BMAL320388 BMASAVP1_A2226BMASAVP1_A0224BMASAVP1_A0224BMASAVP1_A0224
BMAL243160 BMA_1717BMA_0058BMA_0058BMA_0058
BLIC279010 BL00775BL00775BL00775BL00775
BJAP224911 BLL4519BLL4519BLL4519
BHEN283166 BH16300BH08450BH08450BH08450
BHAL272558 BH1535BH1535BH1535BH1535
BCLA66692 ABC1792ABC1792ABC1792ABC1792
BCER572264 BCA_4188BCA_4188BCA_4188BCA_4188
BCER405917 BCE_4145BCE_4145BCE_4145BCE_4145
BCER315749 BCER98_2774BCER98_2774BCER98_2774BCER98_2774
BCER288681 BCE33L3832BCE33L3832BCE33L3832BCE33L3832
BCER226900 BC_4075BC_4075BC_4075BC_4075
BCEN331272 BCEN2424_2133BCEN2424_2893BCEN2424_2893BCEN2424_2893
BCEN331271 BCEN_5944BCEN_2278BCEN_2278BCEN_2278
BCAN483179 BCAN_A1087BCAN_A1008BCAN_A1008BCAN_A1008
BBRO257310 BB1433BB0168BB0168BB0168
BBAC264462 BD2044BD2044BD2044
BANT592021 BAA_4319BAA_4319BAA_4319BAA_4319
BANT568206 BAMEG_4337BAMEG_4337BAMEG_4337BAMEG_4337
BANT261594 GBAA4297GBAA4297GBAA4297GBAA4297
BANT260799 BAS3986BAS3986BAS3986BAS3986
BAMY326423 RBAM_021590RBAM_021590RBAM_021590RBAM_021590
BAMB398577 BAMMC406_2043BAMMC406_2805BAMMC406_2805BAMMC406_2805
BAMB339670 BAMB_2170BAMB_2943BAMB_2943BAMB_2943
BABO262698 BRUAB1_1077BRUAB1_0997BRUAB1_0997BRUAB1_0997
ASP76114 EBA4047EBA3044EBA3044EBA3044
ASP62977 ACIAD0262ACIAD1225ACIAD1225ACIAD1225
ASP62928 AZO0823AZO0180AZO0180AZO0180
ASP232721 AJS_1775AJS_0272AJS_0272AJS_0272
ASAL382245 ASA_3818ASA_1058ASA_1058ASA_1058
APLE434271 APJL_1629APJL_1629APJL_1629
APLE416269 APL_0420APL_1596APL_1596APL_1596
APHA212042 APH_1214APH_1214APH_1214
AORE350688 CLOS_1588CLOS_1588CLOS_1588
AMET293826 AMET_2528AMET_2528AMET_2528
AMAR234826 AM1091AM1091AM1091
AHYD196024 AHA_3705AHA_3259AHA_3259AHA_3259
AFER243159 AFE_0535AFE_0535AFE_0535AFE_0535
AEHR187272 MLG_2349MLG_0176MLG_0176MLG_0176
ACRY349163 ACRY_0248ACRY_0248ACRY_0248
ACAU438753 AZC_2172AZC_2172AZC_2172
ABOR393595 ABO_1959ABO_1959ABO_1959ABO_1959
ABAU360910 BAV0908BAV0135BAV0135BAV0135
AAVE397945 AAVE_3107AAVE_0332AAVE_0332AAVE_0332


Organism features enriched in list (features available for 277 out of the 298 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000338869112
Endospores:No 2.756e-2344211
Endospores:Yes 2.671e-64153
GC_Content_Range4:0-40 3.330e-1458213
GC_Content_Range4:40-60 2.351e-6133224
GC_Content_Range4:60-100 0.000354486145
GC_Content_Range7:30-40 3.804e-1242166
GC_Content_Range7:50-60 1.126e-775107
GC_Content_Range7:60-70 4.770e-686134
Genome_Size_Range5:0-2 6.280e-2521155
Genome_Size_Range5:2-4 0.004076580197
Genome_Size_Range5:4-6 1.848e-27147184
Genome_Size_Range9:0-1 4.173e-7127
Genome_Size_Range9:1-2 1.780e-1720128
Genome_Size_Range9:2-3 0.000036638120
Genome_Size_Range9:4-5 3.601e-127696
Genome_Size_Range9:5-6 4.121e-127188
Genome_Size_Range9:6-8 0.00145362738
Gram_Stain:Gram_Neg 1.001e-20213333
Gram_Stain:Gram_Pos 1.057e-842150
Habitat:Host-associated 0.000946581206
Habitat:Multiple 1.986e-6110178
Habitat:Specialized 0.00006381253
Motility:No 9.993e-1532151
Motility:Yes 7.066e-15173267
Optimal_temp.:- 0.0030355137257
Optimal_temp.:25-30 5.175e-71919
Optimal_temp.:35-37 0.00081151213
Oxygen_Req:Anaerobic 0.000570934102
Oxygen_Req:Facultative 0.0018112111201
Pathogenic_in:Animal 0.00017424566
Pathogenic_in:No 0.005089294226
Shape:Coccobacillus 0.00025051111
Shape:Coccus 9.890e-111382
Shape:Rod 7.127e-27227347
Shape:Sphere 0.0005729219
Shape:Spiral 0.0000335534
Temp._range:Hyperthermophilic 0.0000578223
Temp._range:Mesophilic 0.0079352235473
Temp._range:Thermophilic 0.0013255835



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 323
Effective number of orgs (counting one per cluster within 468 clusters): 258

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 231
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf41
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110170
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40181
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG12015   EG11893   EG10203   EG10201   
WSUC273121 WS0721
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TSP28240
TROS309801 TRD_0441
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN243275 TDE_0979
TACI273075
STRO369723
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SHAE279808
SGOR29390
SERY405948
SEPI176280
SEPI176279
SELO269084
SCO SCO3811
SAVE227882 SAV4379
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI330779
RXYL266117 RXYL_2298
RTYP257363
RSP357808
RSP101510
RSAL288705
RRIC452659 RRIOWA_0641
RRIC392021 A1G_03040
RPRO272947 RP389
RMAS416276
RFEL315456
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_2075
RAKA293614
PTOR263820
PSP312153 PNUC_0739
PSP117
PRUM264731 GFRORF0828
PPEN278197
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225 PLUT_0916
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PCAR338963
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NFAR247156
MXAN246197
MVAN350058 MVAN_2183
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918 MKMS_2007
MSP164757 MJLS_1941
MSP164756 MMCS_1961
MSME246196 MSMEG_2432
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243 MAV_3766
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043 LWE2747
LSPH444177 BSPH_1859
LSAK314315
LREU557436
LPLA220668
LMON265669 LMOF2365_2803
LMON169963 LMO2812
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626 LIN2944
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
KRAD266940
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HBUT415426
HAUR316274
HACI382638
GVIO251221
GURA351605 GURA_4141
GSUL243231
GMET269799
GFOR411154
FSUC59374
FSP1855
FSP106370
FNUC190304
FNOD381764
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
EFAE226185
DVUL882 DVU_2655
DSP255470
DSP216389
DRAD243230
DPSY177439
DOLE96561
DGEO319795
DETH243164
DDES207559
CTRA471473
CTRA471472
CTEP194439 CT_1265
CSUL444179
CSP78 CAUL_3146
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_2582
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CCUR360105
CCON360104
CCHL340177 CAG_1081
CCAV227941
CBLO291272
CBLO203907
CAULO
CABO218497
BXEN266265
BTUR314724
BTHE226186
BSP107806
BLON206672
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BBAC360095
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AVAR240292
AURANTIMONAS
ASP1667
APER272557
ANAE240017
AMAR329726
ALAI441768
AFUL224325
ADEH290397
ACEL351607
ABUT367737 ABU_0114
ABAC204669
AAUR290340
AAEO224324


Organism features enriched in list (features available for 304 out of the 323 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.002690899
Arrangment:Clusters 0.00001251717
Arrangment:Filaments 0.00138291010
Arrangment:Pairs 0.000217642112
Disease:Pharyngitis 0.005227088
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00070951111
Disease:Wide_range_of_infections 0.00070951111
Disease:bronchitis_and_pneumonitis 0.005227088
Endospores:No 5.048e-23166211
Endospores:Yes 3.390e-61253
GC_Content_Range4:0-40 1.289e-14155213
GC_Content_Range4:40-60 1.967e-690224
GC_Content_Range4:60-100 0.000256958145
GC_Content_Range7:30-40 1.862e-12124166
GC_Content_Range7:50-60 5.318e-831107
GC_Content_Range7:60-70 2.939e-647134
GC_Content_Range7:70-100 0.00070951111
Genome_Size_Range5:0-2 2.315e-25134155
Genome_Size_Range5:2-4 0.0046710116197
Genome_Size_Range5:4-6 7.885e-2836184
Genome_Size_Range9:0-1 3.518e-72627
Genome_Size_Range9:1-2 8.635e-18108128
Genome_Size_Range9:2-3 0.000026382120
Genome_Size_Range9:4-5 1.101e-121996
Genome_Size_Range9:5-6 6.621e-121788
Genome_Size_Range9:6-8 0.00165641138
Gram_Stain:Gram_Neg 2.581e-21118333
Gram_Stain:Gram_Pos 6.128e-9108150
Habitat:Host-associated 0.0011017124206
Habitat:Multiple 3.279e-668178
Habitat:Specialized 0.00005234153
Motility:No 4.754e-15119151
Motility:Yes 1.686e-1592267
Optimal_temp.:- 0.0028937119257
Optimal_temp.:30-37 6.338e-61818
Optimal_temp.:35-37 0.0008805113
Oxygen_Req:Anaerobic 0.000447668102
Oxygen_Req:Facultative 0.001564489201
Pathogenic_in:Animal 0.00021492166
Pathogenic_in:No 0.0080191130226
Shape:Coccus 6.522e-116982
Shape:Irregular_coccus 0.00001251717
Shape:Rod 1.620e-27118347
Shape:Sphere 0.00051841719
Shape:Spiral 0.00002852934
Temp._range:Hyperthermophilic 0.00005092123
Temp._range:Thermophilic 0.00116772735



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462110.6135
PWY-5918 (heme biosynthesis I)2722230.6018
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862280.5881
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002330.5756
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831690.5747
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951750.5663
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162810.5595
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912260.5591
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962270.5496
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251890.5444
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911690.5411
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181840.5371
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902220.5365
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392440.5280
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491410.5253
TYRFUMCAT-PWY (tyrosine degradation I)1841620.5211
PWY-4041 (γ-glutamyl cycle)2792130.5140
PWY-1269 (CMP-KDO biosynthesis I)3252350.5117
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551980.4968
PWY-5913 (TCA cycle variation IV)3012210.4953
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081710.4872
PWY-5386 (methylglyoxal degradation I)3052210.4828
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222720.4821
PWY-5028 (histidine degradation II)1301230.4809
DAPLYSINESYN-PWY (lysine biosynthesis I)3422370.4741
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982610.4725
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292300.4675
GLUTAMINDEG-PWY (glutamine degradation I)1911580.4644
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262270.4572
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482370.4565
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002140.4534
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491880.4520
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491880.4520
PWY-5194 (siroheme biosynthesis)3122180.4419
PWY0-862 (cis-dodecenoyl biosynthesis)3432320.4388
AST-PWY (arginine degradation II (AST pathway))1201110.4367
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911540.4365
P601-PWY (D-camphor degradation)95930.4251
GLUCONSUPER-PWY (D-gluconate degradation)2291730.4229
PWY-3162 (tryptophan degradation V (side chain pathway))94920.4223
VALDEG-PWY (valine degradation I)2902040.4206
GALACTARDEG-PWY (D-galactarate degradation I)1511280.4182
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742420.4140
PWY-561 (superpathway of glyoxylate cycle)1621340.4140
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96920.4101
GLYOXYLATE-BYPASS (glyoxylate cycle)1691370.4059
PWY-5148 (acyl-CoA hydrolysis)2271690.4034
PWY-5340 (sulfate activation for sulfonation)3852450.4024
PWY-46 (putrescine biosynthesis III)1381180.4023
SERDEG-PWY (L-serine degradation)3492290.4018
PWY-6196 (serine racemization)102950.4013



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11893   EG10203   EG10201   
EG120150.9992480.9992690.99925
EG118930.9999790.999979
EG102030.999981
EG10201



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PAIRWISE BLAST SCORES:

  EG12015   EG11893   EG10203   EG10201   
EG120150.0f0---
EG11893-0.0f01.7e-943.1e-95
EG10203-5.7e-870.0f01.1e-120
EG10201-3.1e-951.5e-1270.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG12015 (centered at EG12015)
EG11893 (centered at EG11893)
EG10203 (centered at EG10203)
EG10201 (centered at EG10201)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12015   EG11893   EG10203   EG10201   
235/623293/623299/623298/623
AAVE397945:0:Tyes2732000
ABAU360910:0:Tyes775000
ABOR393595:0:Tyes0000
ABUT367737:0:Tyes0---
ACAU438753:0:Tyes-000
ACRY349163:8:Tyes-000
AEHR187272:0:Tyes2158000
AFER243159:0:Tyes0000
AHYD196024:0:Tyes409000
AMAR234826:0:Tyes-000
AMET293826:0:Tyes000-
AORE350688:0:Tyes000-
APHA212042:0:Tyes-000
APLE416269:0:Tyes0120712071207
APLE434271:0:Tno-000
ASAL382245:5:Tyes2657000
ASP232721:2:Tyes1460000
ASP62928:0:Tyes655000
ASP62977:0:Tyes0906906906
ASP76114:2:Tyes588000
BABO262698:1:Tno74000
BAMB339670:3:Tno0789789789
BAMB398577:3:Tno0773773773
BAMY326423:0:Tyes0000
BANT260799:0:Tno0000
BANT261594:2:Tno0000
BANT568206:2:Tyes0000
BANT592021:2:Tno0000
BBAC264462:0:Tyes000-
BBRO257310:0:Tyes1271000
BCAN483179:1:Tno78000
BCEN331271:0:Tno0---
BCEN331271:2:Tno-000
BCEN331272:3:Tyes0757757757
BCER226900:1:Tyes0000
BCER288681:0:Tno0000
BCER315749:1:Tyes0000
BCER405917:1:Tyes0000
BCER572264:1:Tno0000
BCLA66692:0:Tyes0000
BHAL272558:0:Tyes0000
BHEN283166:0:Tyes706000
BJAP224911:0:Fyes-000
BLIC279010:0:Tyes0000
BMAL243160:1:Tno1485000
BMAL320388:1:Tno1960000
BMAL320389:1:Tyes0165916591659
BMEL224914:1:Tno-000
BMEL359391:1:Tno74000
BOVI236:1:Tyes-000
BPAR257311:0:Tno1015000
BPER257313:0:Tyes1290000
BPET94624:0:Tyes250015060
BPSE272560:1:Tyes1894000
BPSE320372:1:Tno2201000
BPSE320373:1:Tno2096000
BPUM315750:0:Tyes0000
BQUI283165:0:Tyes-000
BSP36773:2:Tyes0808808808
BSP376:0:Tyes-000
BSUB:0:Tyes0000
BSUI204722:1:Tyes79000
BSUI470137:1:Tno79000
BTHA271848:1:Tno1462000
BTHU281309:1:Tno0000
BTHU412694:1:Tno0000
BTRI382640:1:Tyes-000
BVIE269482:7:Tyes0766766766
BWEI315730:4:Tyes0000
CACE272562:1:Tyes0784784784
CBEI290402:0:Tyes0-13381338
CBOT36826:1:Tno0666
CBOT441770:0:Tyes0666
CBOT441771:0:Tno0666
CBOT441772:1:Tno0666
CBOT498213:1:Tno0666
CBOT508765:1:Tyes0-00
CBOT515621:2:Tyes0666
CBOT536232:0:Tno0666
CBUR227377:1:Tyes-000
CBUR360115:1:Tno-000
CBUR434922:2:Tno-000
CCHL340177:0:Tyes0---
CDES477974:0:Tyes1771771770
CDIF272563:1:Tyes870000
CHYD246194:0:Tyes0000
CJAP155077:0:Tyes0000
CKLU431943:1:Tyes6-00
CNOV386415:0:Tyes48100-
CPEL335992:0:Tyes-000
CPER195102:1:Tyes0-55
CPER195103:0:Tno0-55
CPER289380:3:Tyes0-55
CPHY357809:0:Tyes0---
CPSY167879:0:Tyes-000
CRUT413404:0:Tyes0000
CSAL290398:0:Tyes0000
CSP501479:8:Fyes-000
CSP78:2:Tyes---0
CTEP194439:0:Tyes0---
CTET212717:0:Tyes0-55
CVES412965:0:Tyes0000
CVIO243365:0:Tyes59000
DARO159087:0:Tyes384000
DHAF138119:0:Tyes202000
DNOD246195:0:Tyes0000
DRED349161:0:Tyes0000
DSHI398580:5:Tyes-000
DVUL882:1:Tyes--0-
ECAN269484:0:Tyes-000
ECAR218491:0:Tyes1498013910
ECHA205920:0:Tyes-000
ECOL199310:0:Tno190117732020
ECOL316407:0:Tno151513882040
ECOL331111:6:Tno169815792380
ECOL362663:0:Tno150913901920
ECOL364106:1:Tno177302080
ECOL405955:2:Tyes151913931790
ECOL409438:6:Tyes173316142120
ECOL413997:0:Tno146413142160
ECOL439855:4:Tno2423831980
ECOL469008:0:Tno012112361473
ECOL481805:0:Tno011312771498
ECOL585034:0:Tno158714532680
ECOL585035:0:Tno154713791900
ECOL585055:0:Tno174816312590
ECOL585056:2:Tno175616403130
ECOL585057:0:Tno2714222280
ECOL585397:0:Tno189316781840
ECOL83334:0:Tno240321942620
ECOLI:0:Tno154214142060
ECOO157:0:Tno241122142620
EFER585054:1:Tyes1225148401484
ELIT314225:0:Tyes-0-0
ESP42895:1:Tyes157914271750
FPHI484022:1:Tyes-000
FRANT:0:Tno-000
FTUL351581:0:Tno-000
FTUL393011:0:Tno-000
FTUL393115:0:Tyes-000
FTUL401614:0:Tyes-000
FTUL418136:0:Tno-000
FTUL458234:0:Tno-000
GBET391165:0:Tyes-000
GKAU235909:1:Tyes0000
GOXY290633:5:Tyes-000
GTHE420246:1:Tyes0000
GURA351605:0:Tyes0---
HARS204773:0:Tyes0206920692069
HCHE349521:0:Tyes0438543854385
HDUC233412:0:Tyes-000
HHAL349124:0:Tyes-000
HINF281310:0:Tyes410000
HINF374930:0:Tyes0335335335
HINF71421:0:Tno317000
HMOD498761:0:Tyes0000
HNEP81032:0:Tyes-000
HSOM205914:1:Tyes-000
ILOI283942:0:Tyes-000
JSP290400:1:Tyes-000
JSP375286:0:Tyes0254525452545
KPNE272620:2:Tyes125034843278
LCHO395495:0:Tyes0134813481348
LINN272626:1:Tno0---
LMON169963:0:Tno0---
LMON265669:0:Tyes0---
LPNE272624:0:Tno0000
LPNE297245:1:Fno0000
LPNE297246:1:Fyes0000
LPNE400673:0:Tno0000
LSPH444177:1:Tyes0---
LWEL386043:0:Tyes0---
MAQU351348:2:Tyes1188000
MAVI243243:0:Tyes0---
MCAP243233:0:Tyes-000
MEXT419610:0:Tyes-000
MFLA265072:0:Tyes0226522652265
MLOT266835:2:Tyes-000
MMAG342108:0:Tyes-000
MMAR394221:0:Tyes-000
MPET420662:1:Tyes1783000
MSME246196:0:Tyes0---
MSP164756:1:Tno0---
MSP164757:0:Tno0---
MSP189918:2:Tyes0---
MSP266779:3:Tyes-000
MSP400668:0:Tyes0000
MSP409:2:Tyes-000
MSUC221988:0:Tyes0100510051005
MTHE264732:0:Tyes1380-138
MVAN350058:0:Tyes0---
NARO279238:0:Tyes-000
NEUR228410:0:Tyes0000
NEUT335283:2:Tyes0000
NGON242231:0:Tyes0111111111
NHAM323097:2:Tyes-000
NMEN122586:0:Tno0126126126
NMEN122587:0:Tyes0128128128
NMEN272831:0:Tno0105105105
NMEN374833:0:Tno0124124124
NMUL323848:3:Tyes301000
NOCE323261:1:Tyes-000
NWIN323098:0:Tyes-000
OANT439375:5:Tyes-000
OCAR504832:0:Tyes-000
OIHE221109:0:Tyes0161616
PAER208963:0:Tyes3317000
PAER208964:0:Tno0316331633163
PARC259536:0:Tyes17000
PATL342610:0:Tyes-000
PCRY335284:1:Tyes20000
PENT384676:0:Tyes0152015201520
PFLU205922:0:Tyes0128912891289
PFLU216595:1:Tyes0143314331433
PFLU220664:0:Tyes0142014201420
PHAL326442:1:Tyes-000
PING357804:0:Tyes0000
PLUM243265:0:Fyes-03010
PLUT319225:0:Tyes0---
PMEN399739:0:Tyes0376637663766
PMUL272843:1:Tyes-000
PNAP365044:8:Tyes1537000
PPRO298386:2:Tyes0101210121012
PPUT160488:0:Tno0100510051005
PPUT351746:0:Tyes0272427242724
PPUT76869:0:Tno0274527452745
PRUM264731:0:Tyes0---
PSP296591:2:Tyes2061000
PSP312153:0:Tyes0---
PSP56811:2:Tyes0336336336
PSTU379731:0:Tyes0373037303730
PSYR205918:0:Tyes0196019601960
PSYR223283:2:Tyes0210521052105
PTHE370438:0:Tyes0000
RALB246199:0:Tyes0---
RDEN375451:4:Tyes-000
RETL347834:5:Tyes0120912090
REUT264198:3:Tyes0000
REUT381666:2:Tyes1069000
RFER338969:1:Tyes1426000
RLEG216596:6:Tyes0145614560
RMET266264:2:Tyes979000
RPAL258594:0:Tyes-000
RPAL316055:0:Tyes-000
RPAL316056:0:Tyes-000
RPAL316057:0:Tyes-000
RPAL316058:0:Tyes-000
RPOM246200:1:Tyes-000
RPRO272947:0:Tyes0---
RRIC392021:0:Fno0---
RRIC452659:0:Tyes0---
RRUB269796:1:Tyes-000
RSOL267608:1:Tyes1314000
RSPH272943:4:Tyes-0145145
RSPH349101:2:Tno-00144
RSPH349102:5:Tyes-6906900
RXYL266117:0:Tyes0---
SACI56780:0:Tyes-000
SAVE227882:1:Fyes0---
SBAL399599:3:Tyes0254125412541
SBAL402882:1:Tno0242824282428
SBOY300268:1:Tyes485000
SCO:2:Fyes0---
SDEG203122:0:Tyes0000
SDEN318161:0:Tyes247000
SDYS300267:1:Tyes151515902770
SENT209261:0:Tno-1860186
SENT220341:0:Tno-01860
SENT295319:0:Tno0135111581351
SENT321314:2:Tno154714342030
SENT454169:2:Tno158814752280
SFLE198214:0:Tyes148801450
SFLE373384:0:Tno1426000
SFUM335543:0:Tyes2730000
SGLO343509:3:Tyes13301330
SHAL458817:0:Tyes-000
SHIGELLA:0:Tno1439000
SLAC55218:1:Fyes-000
SLOI323850:0:Tyes-000
SMED366394:3:Tyes0781781781
SMEL266834:2:Tyes0725725725
SONE211586:1:Tyes0163163163
SPEA398579:0:Tno-000
SPRO399741:1:Tyes01291276276
SSED425104:0:Tyes-000
SSON300269:1:Tyes1524141800
SSP292414:1:Tyes-000
SSP644076:2:Fyes-000
SSP94122:1:Tyes2379000
STHE292459:0:Tyes0789789789
STYP99287:1:Tyes151614102230
SWOL335541:0:Tyes284000
TCRU317025:0:Tyes0000
TDEN243275:0:Tyes---0
TDEN292415:0:Tyes0576576576
TPSE340099:0:Tyes19000
TROS309801:1:Tyes0---
TSP1755:0:Tyes19000
TTEN273068:0:Tyes14000
TTUR377629:0:Tyes0000
VCHO:0:Tyes-000
VCHO:1:Fyes0---
VCHO345073:0:Tno0---
VCHO345073:1:Tno-000
VEIS391735:1:Tyes2355000
VFIS312309:2:Tyes-000
VPAR223926:1:Tyes-000
VVUL196600:2:Tyes-000
VVUL216895:1:Tno-000
WPIP80849:0:Tyes-000
WPIP955:0:Tyes-000
WSUC273121:0:Tyes0---
XAUT78245:1:Tyes217000
XAXO190486:0:Tyes-000
XCAM190485:0:Tyes-000
XCAM314565:0:Tno-000
XCAM316273:0:Tno-000
XCAM487884:0:Tno-000
XFAS160492:2:Tno-000
XFAS183190:1:Tyes-000
XFAS405440:0:Tno-000
XORY291331:0:Tno-000
XORY342109:0:Tyes-000
XORY360094:0:Tno-000
YENT393305:1:Tyes1332146401464
YPES187410:5:Tno1841016890
YPES214092:3:Tno013601351360
YPES349746:2:Tno0486190486
YPES360102:3:Tyes0163616361636
YPES377628:2:Tno1743015981598
YPES386656:2:Tno1452810281
YPSE273123:2:Tno1340269269
YPSE349747:2:Tno1462900290
ZMOB264203:0:Tyes-000



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