CANDIDATE ID: 1082

CANDIDATE ID: 1082

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9950800e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7448 (yqcA) (b2790)
   Products of gene:
     - G7448-MONOMER (predicted flavoprotein)

- EG11199 (mioC) (b3742)
   Products of gene:
     - EG11199-MONOMER (flavoprotein involved in biotin synthesis)

- EG10191 (cysJ) (b2764)
   Products of gene:
     - ALPHACOMP-MONOMER (sulfite reductase, flavoprotein subunit)
     - CPLX0-7841 (sulfite reductase, flavoprotein subunit complex)
       Reactions:
        riboflavin + NADPH + 2 H+  ->  reduced riboflavin + NADP+
     - SULFITE-REDUCT-CPLX (sulfite reductase)
       Reactions:
        3 NADPH + sulfite + 5 H+  ->  3 NADP+ + hydrogen sulfide + 3 H2O
         In pathways
         PWY-821 (PWY-821)
         SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)
         PWY-5345 (PWY-5345)
         SO4ASSIM-PWY (sulfate reduction I (assimilatory))

- EG10190 (cysI) (b2763)
   Products of gene:
     - BETACOMP-MONOMER (sulfite reductase, hemoprotein subunit)
     - SULFITE-REDUCT-CPLX (sulfite reductase)
       Reactions:
        3 NADPH + sulfite + 5 H+  ->  3 NADP+ + hydrogen sulfide + 3 H2O
         In pathways
         PWY-821 (PWY-821)
         SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)
         PWY-5345 (PWY-5345)
         SO4ASSIM-PWY (sulfate reduction I (assimilatory))



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 216
Effective number of orgs (counting one per cluster within 468 clusters): 133

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79013
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP94122 ncbi Shewanella sp. ANA-34
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SAUR93062 ncbi Staphylococcus aureus aureus COL3
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83253
SAUR426430 ncbi Staphylococcus aureus aureus Newman3
SAUR418127 ncbi Staphylococcus aureus aureus Mu33
SAUR367830 Staphylococcus aureus aureus USA3003
SAUR359787 ncbi Staphylococcus aureus aureus JH13
SAUR359786 ncbi Staphylococcus aureus aureus JH93
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4763
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2523
SAUR273036 ncbi Staphylococcus aureus RF1223
SAUR196620 ncbi Staphylococcus aureus aureus MW23
SAUR158879 ncbi Staphylococcus aureus aureus N3153
SAUR158878 ncbi Staphylococcus aureus aureus Mu503
SAGA211110 ncbi Streptococcus agalactiae NEM3163
SAGA208435 ncbi Streptococcus agalactiae 2603V/R3
SAGA205921 ncbi Streptococcus agalactiae A9093
RSP101510 ncbi Rhodococcus jostii RHA14
RMET266264 ncbi Ralstonia metallidurans CH343
REUT381666 ncbi Ralstonia eutropha H163
REUT264198 ncbi Ralstonia eutropha JMP1343
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a3
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP296591 ncbi Polaromonas sp. JS6663
PSP117 Pirellula sp.4
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ23
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW253
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM54
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NFAR247156 ncbi Nocardia farcinica IFM 101524
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
MXAN246197 ncbi Myxococcus xanthus DK 16224
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-13
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL13
MSP189918 ncbi Mycobacterium sp. KMS3
MSP164757 ncbi Mycobacterium sp. JLS3
MSP164756 ncbi Mycobacterium sp. MCS3
MPET420662 ncbi Methylibium petroleiphilum PM14
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath3
MAVI243243 ncbi Mycobacterium avium 1044
MAQU351348 ncbi Marinobacter aquaeolei VT84
MACE188937 ncbi Methanosarcina acetivorans C2A3
MABS561007 ncbi Mycobacterium abscessus ATCC 199774
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)4
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)4
KRAD266940 ncbi Kineococcus radiotolerans SRS302163
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS13
ILOI283942 ncbi Idiomarina loihiensis L2TR3
HINF71421 ncbi Haemophilus influenzae Rd KW203
HINF374930 ncbi Haemophilus influenzae PittEE3
HINF281310 ncbi Haemophilus influenzae 86-028NP3
HHAL349124 ncbi Halorhodospira halophila SL13
HCHE349521 ncbi Hahella chejuensis KCTC 23963
HARS204773 ncbi Herminiimonas arsenicoxydans4
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
FSP1855 Frankia sp. EAN1pec4
FJOH376686 ncbi Flavobacterium johnsoniae UW1013
FALN326424 ncbi Frankia alni ACN14a4
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
CSP78 Caulobacter sp.3
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CJAP155077 Cellvibrio japonicus3
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CAULO ncbi Caulobacter crescentus CB154
BVIE269482 ncbi Burkholderia vietnamiensis G43
BTHU412694 ncbi Bacillus thuringiensis Al Hakam3
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-273
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUB ncbi Bacillus subtilis subtilis 1684
BSP36773 Burkholderia sp.4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCIC186490 Candidatus Baumannia cicadellinicola3
BCER572264 ncbi Bacillus cereus 03BB1023
BCER405917 Bacillus cereus W3
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BBRO257310 ncbi Bordetella bronchiseptica RB504
BANT592021 ncbi Bacillus anthracis A02483
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor3
BANT260799 ncbi Bacillus anthracis Sterne3
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232703
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-13
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
AAUR290340 ncbi Arthrobacter aurescens TC13


Names of the homologs of the genes in the group in each of these orgs
  G7448   EG11199   EG10191   EG10190   
ZMOB264203 ZMO0009ZMO0009ZMO0009ZMO0008
YPSE349747 YPSIP31758_1008YPSIP31758_0001YPSIP31758_3311YPSIP31758_3310
YPSE273123 YPTB3008YPTB0001YPTB0759YPTB0760
YPES386656 YPDSF_1674YPDSF_3904YPDSF_2987YPDSF_2988
YPES377628 YPN_2963YPN_0001YPN_0720YPN_0721
YPES360102 YPA_0513YPA_0001YPA_2870YPA_2869
YPES349746 YPANGOLA_A3440YPANGOLA_A0001YPANGOLA_A0975YPANGOLA_A0974
YPES214092 YPO1039YPO0001YPO3372YPO3371
YPES187410 Y3142Y0001Y0818Y0819
YENT393305 YE3289YE0001YE0755YE0756
XORY360094 XOOORF_3752XOOORF_3752XOOORF_3752XOOORF_3753
XORY342109 XOO3199XOO3199XOO3199XOO3200
XORY291331 XOO3398XOO3398XOO3399XOO3400
XFAS405440 XFASM12_0839XFASM12_0839XFASM12_0839XFASM12_0838
XFAS183190 PD_0716PD_0716PD_0716PD_0715
XFAS160492 XF1499XF1499XF1499XF1498
XCAM487884 XCC-B100_1004XCC-B100_1004XCC-B100_1004XCC-B100_1003
XCAM316273 XCAORF_3512XCAORF_3512XCAORF_3512XCAORF_3513
XCAM314565 XC_0992XC_0992XC_0992XC_0991
XCAM190485 XCC3173XCC3173XCC3173XCC3174
XAXO190486 XAC3330XAC3330XAC3330XAC3331
VVUL216895 VV1_1009VV1_1009VV1_1402VV1_1403
VVUL196600 VV0001VV0001VV2967VV2966
VPAR223926 VP0001VP0001VP2722VP2721
VFIS312309 VF0310VF0001VF0310VF0311
VCHO345073 VC0395_A2516VC0395_A2516VC0395_A2795VC0395_A2796
VCHO VC0002VC0002VC0384VC0385
TTUR377629 TERTU_3530TERTU_3530TERTU_2120
STYP99287 STM2963STM3875STM2948STM2947
SSP94122 SHEWANA3_2823SHEWANA3_0003SHEWANA3_0855SHEWANA3_0856
SSON300269 SSO_2947SSO_3877SSO_2917SSO_2916
SSED425104 SSED_3168SSED_4498SSED_3807SSED_3806
SSAP342451 SSP2408SSP2408SSP2408SSP2407
SPRO399741 SPRO_3795SPRO_4907SPRO_0810SPRO_0811
SPEA398579 SPEA_2890SPEA_4252SPEA_0653SPEA_0654
SONE211586 SO_1622SO_0001SO_3738SO_3737
SLOI323850 SHEW_2642SHEW_3857SHEW_0665SHEW_0666
SHIGELLA S2997MIOCCYSJCYSI
SHAL458817 SHAL_2987SHAL_4306SHAL_3543SHAL_3542
SHAE279808 SH0414SH0414SH0414SH0415
SGLO343509 SG1948SG2404SG0516SG0517
SFLE373384 SFV_2667SFV_3768SFV_2741SFV_2742
SFLE198214 AAN44291.1AAN45262.1AAN44269.1AAN44268.1
SEPI176280 SE_2180SE_2180SE_2180SE_2179
SEPI176279 SERP2191SERP2191SERP2191SERP2190
SENT454169 SEHA_C3170SEHA_C4208SEHA_C3143SEHA_C3142
SENT321314 SCH_2903SCH_3788SCH_2879SCH_2878
SENT295319 SPA2827SPA3714SPA2804SPA2803
SENT220341 STY3102STY3903STY3076STY3075
SENT209261 T2872T3644T2849T2848
SDYS300267 SDY_3007SDY_4006SDY_2966SDY_2965
SDEN318161 SDEN_1547SDEN_3764SDEN_0932SDEN_0933
SDEG203122 SDE_1473SDE_1473SDE_1473SDE_2013
SBOY300268 SBO_2671SBO_3745SBO_2647SBO_2646
SBAL402882 SHEW185_1438SHEW185_4377SHEW185_0919SHEW185_0920
SBAL399599 SBAL195_1474SBAL195_4519SBAL195_0953SBAL195_0954
SAVE227882 SAV2330SAV2330SAV2330SAV2127
SAUR93062 SACOL2639SACOL2639SACOL2639
SAUR93061 SAOUHSC_02947SAOUHSC_02947SAOUHSC_02947
SAUR426430 NWMN_2518NWMN_2518NWMN_2518
SAUR418127 SAHV_2604SAHV_2604SAHV_2604
SAUR367830 SAUSA300_2554SAUSA300_2554SAUSA300_2554
SAUR359787 SAURJH1_2698SAURJH1_2698SAURJH1_2698
SAUR359786 SAURJH9_2643SAURJH9_2643SAURJH9_2643
SAUR282459 SAS2506SAS2506SAS2506
SAUR282458 SAR2698SAR2698SAR2698
SAUR273036 SAB2494CSAB2494CSAB2494C
SAUR196620 MW2540MW2540MW2540
SAUR158879 SA2413SA2413SA2413
SAUR158878 SAV2620SAV2620SAV2620
SAGA211110 GBS0584GBS0584GBS0584
SAGA208435 SAG_0539SAG_0539SAG_0539
SAGA205921 SAK_0689SAK_0689SAK_0689
RSP101510 RHA1_RO01797RHA1_RO01798RHA1_RO01797RHA1_RO01251
RMET266264 RMET_5636RMET_3467RMET_2816
REUT381666 H16_B2500H16_B2500H16_A2999
REUT264198 REUT_B5211REUT_B5211REUT_A2696
PSYR223283 PSPTO_1186PSPTO_1186PSPTO_4569PSPTO_4877
PSYR205918 PSYR_1024PSYR_1024PSYR_4243
PSTU379731 PST_1138PST_1138PST_0997PST_2236
PSP296591 BPRO_2982BPRO_2982BPRO_1630
PSP117 RB11009RB11009RB380RB7465
PPUT76869 PPUTGB1_4612PPUTGB1_4612PPUTGB1_1302PPUTGB1_1978
PPUT351746 PPUT_4488PPUT_4488PPUT_4016PPUT_3324
PPUT160488 PP_4628PP_4628PP_1703PP_2371
PPRO298386 PBPRA2972PBPRA0001PBPRA3321PBPRA3320
PNAP365044 PNAP_1908PNAP_1908PNAP_2942
PMEN399739 PMEN_3283PMEN_3283PMEN_0793PMEN_2147
PLUM243265 PLU0667PLU0050PLU0703PLU0704
PING357804 PING_3742PING_3742PING_3434PING_3435
PHAL326442 PSHAA1969PSHAA3020PSHAA0154PSHAA0155
PFLU220664 PFL_0955PFL_0955PFL_0863PFL_2835
PFLU216595 PFLU5152PFLU5152PFLU3426
PFLU205922 PFL_0897PFL_0897PFL_0797PFL_2513
PENT384676 PSEEN4620PSEEN4620PSEEN1417PSEEN3407
PATL342610 PATL_3183PATL_4309PATL_4039PATL_4038
PAER208964 PA3435PA3435PA4513PA4130
PAER208963 PA14_19660PA14_19660PA14_58560PA14_10550
OIHE221109 OB1653OB1653OB1653OB1654
OCAR504832 OCAR_4547OCAR_4547OCAR_4547OCAR_4548
NWIN323098 NWI_0590NWI_0590NWI_0590NWI_0591
NOCE323261 NOC_1305NOC_1305NOC_1305NOC_1306
NMEN374833 NMCC_1070NMCC_1070NMCC_1070NMCC_1069
NMEN272831 NMC1092NMC1092NMC1092NMC1091
NMEN122587 NMA1363NMA1363NMA1363NMA1362
NMEN122586 NMB_1190NMB_1190NMB_1190NMB_1189
NHAM323097 NHAM_0682NHAM_0682NHAM_0682NHAM_0683
NFAR247156 NFA51300NFA51300NFA51300NFA14190
NEUT335283 NEUT_1185NEUT_1185NEUT_1185NEUT_1184
NEUR228410 NE0853NE0853NE0853NE0852
MXAN246197 MXAN_2335MXAN_2335MXAN_2335MXAN_2334
MVAN350058 MVAN_3491MVAN_3491MVAN_3857
MSUC221988 MS1250MS2250MS1250MS1249
MSP409 M446_5483M446_5483M446_5484
MSP400668 MMWYL1_0226MMWYL1_0226MMWYL1_2345
MSP189918 MKMS_3291MKMS_3291MKMS_3537
MSP164757 MJLS_3240MJLS_3240MJLS_3487
MSP164756 MMCS_3229MMCS_3229MMCS_3474
MPET420662 MPE_A3726MPE_A3726MPE_A3726MPE_A1503
MGIL350054 MFLV_0347MFLV_3016MFLV_3016MFLV_2686
MFLA265072 MFLA_0428MFLA_2733MFLA_2733MFLA_1671
MEXT419610 MEXT_2236MEXT_2236MEXT_2236MEXT_2237
MCAP243233 MCA_0431MCA_0431MCA_2059
MAVI243243 MAV_2075MAV_2075MAV_2075MAV_1787
MAQU351348 MAQU_3588MAQU_3588MAQU_3213MAQU_1528
MACE188937 MA2699MA2699MA2699
MABS561007 MAB_2485CMAB_2485CMAB_2485CMAB_1662C
LSPH444177 BSPH_0592BSPH_0592BSPH_0592BSPH_0593
LBIF456481 LEPBI_I1180LEPBI_I1180LEPBI_I1180LEPBI_I1181
LBIF355278 LBF_1137LBF_1137LBF_1137LBF_1138
KRAD266940 KRAD_1331KRAD_1331KRAD_1331
KPNE272620 GKPORF_B2467GKPORF_B3489GKPORF_B2450GKPORF_B4567
JSP375286 MMA_3617MMA_3617MMA_3617MMA_2452
JSP290400 JANN_0673JANN_0673JANN_1773
ILOI283942 IL2631IL2631IL2631
HINF71421 HI_0669HI_0669HI_0669
HINF374930 CGSHIEE_08830CGSHIEE_08830CGSHIEE_08830
HINF281310 NTHI0791NTHI0791NTHI0791
HHAL349124 HHAL_0187HHAL_0187HHAL_0187
HCHE349521 HCH_00784HCH_00784HCH_02538
HARS204773 HEAR3398HEAR3398HEAR3398HEAR2392
GTHE420246 GTNG_1269GTNG_1269GTNG_1269GTNG_1270
GKAU235909 GK1409GK1409GK1409GK1410
FSP1855 FRANEAN1_1491FRANEAN1_1491FRANEAN1_1491FRANEAN1_6105
FJOH376686 FJOH_4069FJOH_4069FJOH_1504
FALN326424 FRAAL5324FRAAL5324FRAAL5324FRAAL1017
ESP42895 ENT638_3243ENT638_4122ENT638_3227ENT638_3226
EFER585054 EFER_0271EFER_4041EFER_0298EFER_0299
ECOO157 Z4106MIOCCYSJCYSI
ECOL83334 ECS3650ECS4684ECS3619ECS3618
ECOL585397 ECED1_3243ECED1_4432ECED1_3213ECED1_3212
ECOL585057 ECIAI39_3212ECIAI39_4346ECIAI39_2946ECIAI39_2945
ECOL585056 ECUMN_3119ECUMN_4272ECUMN_3092ECUMN_3091
ECOL585055 EC55989_3069EC55989_4217EC55989_3038EC55989_3037
ECOL585035 ECS88_3058ECS88_4164ECS88_3028ECS88_3027
ECOL585034 ECIAI1_2899ECIAI1_3926ECIAI1_2868ECIAI1_2867
ECOL481805 ECOLC_0922ECOLC_4252ECOLC_0948ECOLC_0949
ECOL469008 ECBD_0939ECBD_4290ECBD_0965ECBD_0966
ECOL439855 ECSMS35_2930ECSMS35_4110ECSMS35_2892ECSMS35_2891
ECOL413997 ECB_02635ECB_03626ECB_02609ECB_02608
ECOL409438 ECSE_3050ECSE_4032ECSE_3020ECSE_3019
ECOL405955 APECO1_3741APECO1_2721APECO1_3768APECO1_3769
ECOL364106 UTI89_C3160UTI89_C4297UTI89_C3128UTI89_C3127
ECOL362663 ECP_2771ECP_3941ECP_2738ECP_2737
ECOL331111 ECE24377A_3094ECE24377A_4258ECE24377A_3066ECE24377A_3065
ECOL316407 ECK2784:JW2761:B2790ECK3736:JW3720:B3742ECK2759:JW2734:B2764ECK2758:JW2733:B2763
ECOL199310 C3356C4670C3323C3322
ECAR218491 ECA1026ECA0001ECA3547ECA3546
CSP78 CAUL_3992CAUL_3992CAUL_3267
CSAL290398 CSAL_1806CSAL_1806CSAL_2696CSAL_2695
CPSY167879 CPS_4759CPS_5048CPS_4759CPS_4760
CJAP155077 CJA_2403CJA_2403CJA_2954
CBLO291272 BPEN_163BPEN_163BPEN_164
CAULO CC3063CC3063CC3063CC1119
BVIE269482 BCEP1808_5043BCEP1808_5043BCEP1808_2558
BTHU412694 BALH_3182BALH_2868BALH_1279
BTHU281309 BT9727_3300BT9727_2981BT9727_1306
BTHA271848 BTH_II1172BTH_II1172BTH_II1172BTH_I0814
BSUB BSU33440BSU33440BSU33440BSU33430
BSP36773 BCEP18194_B1346BCEP18194_B1346BCEP18194_B1346BCEP18194_A5806
BPUM315750 BPUM_1777BPUM_1777BPUM_1777BPUM_1778
BPSE320373 BURPS668_A1752BURPS668_A1752BURPS668_A1752BURPS668_1006
BPSE320372 BURPS1710B_B0286BURPS1710B_B0286BURPS1710B_B0286BURPS1710B_A1220
BPSE272560 BPSS1241BPSS1241BPSS1241BPSL0956
BPET94624 BPET3048BPET3048BPET3048BPET3049
BPER257313 BP1209BP1209BP1209BP3432
BPAR257311 BPP1823BPP1823BPP1823BPP0395
BMAL320389 BMA10247_A1247BMA10247_A1247BMA10247_A1247BMA10247_1662
BMAL320388 BMASAVP1_0080BMASAVP1_0080BMASAVP1_0080BMASAVP1_A2348
BMAL243160 BMA_A1084BMA_A1084BMA_A1084BMA_0663
BLIC279010 BL01949BL01949BL01949BL01950
BHAL272558 BH0609BH0609BH0609BH0610
BCLA66692 ABC0618ABC0618ABC0618ABC0619
BCIC186490 BCI_0218BCI_0218BCI_0217
BCER572264 BCA_3615BCA_3251BCA_1481
BCER405917 BCE_3555BCE_3239BCE_1547
BCEN331272 BCEN2424_4504BCEN2424_4504BCEN2424_4504BCEN2424_2475
BCEN331271 BCEN_3865BCEN_3865BCEN_3865BCEN_1864
BBRO257310 BB3283BB3283BB3283BB0397
BANT592021 BAA_3625BAA_3269BAA_1513
BANT568206 BAMEG_1036BAMEG_1392BAMEG_3149
BANT261594 GBAA3596GBAA3221GBAA1443
BANT260799 BAS3335BAS2993BAS1333
BAMY326423 RBAM_030610RBAM_030610RBAM_030610RBAM_030600
BAMB398577 BAMMC406_4398BAMMC406_4398BAMMC406_4398BAMMC406_2392
BAMB339670 BAMB_3934BAMB_3934BAMB_3934BAMB_2524
ASAL382245 ASA_4362ASA_4362ASA_4362
APLE434271 APJL_1591APJL_1591APJL_1882APJL_1881
APLE416269 APL_1563APL_1563APL_1843APL_1842
AHYD196024 AHA_1165AHA_4274AHA_3371AHA_3372
AFER243159 AFE_3211AFE_3211AFE_3210
AEHR187272 MLG_1892MLG_1892MLG_1264
ACRY349163 ACRY_2801ACRY_2801ACRY_2801ACRY_2799
ACAU438753 AZC_1828AZC_1828AZC_0680AZC_0681
ABOR393595 ABO_2124ABO_2124ABO_2124ABO_2125
AAUR290340 AAUR_PTC20214AAUR_PTC20214AAUR_PTC20214


Organism features enriched in list (features available for 202 out of the 216 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00029541892
Arrangment:Clusters 3.296e-71617
Arrangment:Pairs 0.000082156112
Disease:Bubonic_plague 0.001647366
Disease:Dysentery 0.001647366
Disease:Gastroenteritis 0.00180201013
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 7.201e-61111
Endospores:No 0.000982557211
GC_Content_Range4:0-40 5.211e-1237213
GC_Content_Range4:40-60 0.0000255100224
GC_Content_Range4:60-100 0.001054465145
GC_Content_Range7:0-30 2.048e-8147
GC_Content_Range7:30-40 0.000010136166
GC_Content_Range7:50-60 0.000014756107
GC_Content_Range7:60-70 0.000965761134
Genome_Size_Range5:0-2 2.293e-284155
Genome_Size_Range5:2-4 0.002282654197
Genome_Size_Range5:4-6 6.441e-20113184
Genome_Size_Range5:6-10 3.854e-63147
Genome_Size_Range9:0-1 0.0001133127
Genome_Size_Range9:1-2 4.089e-233128
Genome_Size_Range9:3-4 0.00817121877
Genome_Size_Range9:4-5 0.00013054996
Genome_Size_Range9:5-6 1.931e-156488
Genome_Size_Range9:6-8 2.003e-62738
Gram_Stain:Gram_Neg 5.232e-6140333
Habitat:Specialized 0.0005946853
Motility:No 0.009615442151
Motility:Yes 6.926e-7120267
Optimal_temp.:20-30 0.007613967
Optimal_temp.:30-37 0.00016231418
Optimal_temp.:37 0.004566426106
Oxygen_Req:Anaerobic 8.634e-155102
Oxygen_Req:Facultative 8.497e-11105201
Oxygen_Req:Microaerophilic 0.0040939118
Pathogenic_in:No 0.000022256226
Pathogenic_in:Plant 0.00831371015
Shape:Irregular_coccus 0.0059956117
Shape:Rod 6.322e-10154347
Shape:Sphere 0.0027840119
Shape:Spiral 0.0003498334
Temp._range:Mesophilic 0.0000155182473
Temp._range:Thermophilic 0.0002439335



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 330
Effective number of orgs (counting one per cluster within 468 clusters): 281

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 71
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
SSP644076 Silicibacter sp. TrichCH4B1
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP292414 ncbi Ruegeria sp. TM10401
SSOL273057 ncbi Sulfolobus solfataricus P21
SRUB309807 ncbi Salinibacter ruber DSM 138550
SMEL266834 ncbi Sinorhizobium meliloti 10211
SMED366394 ncbi Sinorhizobium medicae WSM4191
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis1
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SCO ncbi Streptomyces coelicolor A3(2)1
SARE391037 ncbi Salinispora arenicola CNS-2051
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.11
RSP357808 ncbi Roseiflexus sp. RS-10
RSOL267608 ncbi Ralstonia solanacearum GMI10001
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111701
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38411
RFER338969 ncbi Rhodoferax ferrireducens T1181
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ950
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OANT439375 ncbi Ochrobactrum anthropi ATCC 491881
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP266779 ncbi Chelativorans sp. BNC10
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLOT266835 ncbi Mesorhizobium loti MAFF3030991
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-61
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LACI272621 ncbi Lactobacillus acidophilus NCFM1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf41
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H1
GMET269799 ncbi Geobacter metallireducens GS-151
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R11
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
DARO159087 ncbi Dechloromonas aromatica RCB1
CVIO243365 ncbi Chromobacterium violaceum ATCC 124720
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE451
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6301
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BQUI283165 ncbi Bartonella quintana Toulouse0
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN11
ASP62977 ncbi Acinetobacter sp. ADP11
ASP232721 ncbi Acidovorax sp. JS421
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG11
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40181
ABAU360910 ncbi Bordetella avium 197N1
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  G7448   EG11199   EG10191   EG10190   
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0672
TTHE262724 TT_C0313
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800 TFU_1888
TDEN326298 TMDEN_1241
TDEN292415
TDEN243275
TCRU317025 TCR_1893
TACI273075
SWOL335541
STRO369723
STOK273063 ST2566
STHE292459
SSP644076 SCH4B_2018
SSP387093
SSP292414 TM1040_1758
SSOL273057 SSO2909
SRUB309807
SMEL266834 SMC02124
SMED366394 SMED_1101
SMAR399550
SLAC55218 SL1157_3062
SFUM335543
SCO SCO6102
SARE391037 SARE_4085
SALA317655
SACI56780
SACI330779 SACI_2201
RXYL266117 RXYL_0963
RTYP257363
RSPH349102 RSPH17025_0338
RSPH349101
RSPH272943 RSP_1942
RSP357808
RSOL267608 RSC2425
RSAL288705
RRUB269796 RRU_A1931
RRIC452659
RRIC392021
RPRO272947
RPAL316057 RPD_1820
RPAL316056 RPC_0660
RPAL316055 RPE_1259
RPAL258594 RPA3711
RMAS416276
RLEG216596 RL2274
RFER338969 RFER_0222
RFEL315456
RETL347834
RDEN375451 RD1_2966
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_1506
PSP56811 PSYCPRWF_1110
PSP312153 PNUC_0345
PRUM264731
PPEN278197
PMOB403833
PLUT319225
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PCAR338963 PCAR_1767
PAST100379
PARS340102
PARC259536 PSYC_1068
PAER178306 PAE2577
PACN267747
PABY272844
OTSU357244
OANT439375 OANT_0190
NSP387092 NIS_1436
NSP35761 NOCA_2351
NSEN222891
NPHA348780 NP1146A
NMUL323848 NMUL_A1146
NGON242231
NARO279238 SARO_2558
MTUB419947 MRA_2415
MTUB336982 TBFG_12419
MTHE349307
MTHE264732
MTHE187420
MTBRV RV2391
MTBCDC MT2461
MSYN262723
MSTA339860
MSP266779
MSME246196 MSMEG_4527
MSED399549 MSED_0961
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221 MMAR10_0345
MMAR368407
MMAR267377
MLOT266835 MLL3230
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289 BCG_2405
MBOV233413 MB2412
MBAR269797
MART243272
MAEO419665
LXYL281090
LWEL386043 LWE1730
LREU557436 LREU_1386
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668 LP_1477
LMON265669 LMOF2365_1734
LMON169963 LMO1710
LMES203120 LEUM_1393
LLAC272623 L197697
LLAC272622 LACR_0628
LJOH257314 LJ_1596
LINT363253
LINT267671 LIC_13367
LINT189518 LA4215
LINN272626 LIN1822
LHEL405566 LHV_0654
LGAS324831 LGAS_0699
LDEL390333
LDEL321956
LCHO395495 LCHO_2784
LCAS321967 LSEI_1087
LBRE387344 LVIS_0247
LBOR355277 LBJ_2837
LBOR355276 LBL_0234
LACI272621 LBA0622
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032 HNE_0325
HMUK485914 HMUK_0435
HMOD498761
HMAR272569 RRNAC2992
HHEP235279
HBUT415426
HAUR316274 HAUR_2522
HACI382638
GURA351605 GURA_4000
GSUL243231
GOXY290633 GOX1198
GMET269799 GMET_2520
GFOR411154 GFO_0327
GBET391165 GBCGDNIH1_0909
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP106370 FRANCCI3_0525
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
ERUM302409
ERUM254945
ECHA205920
ECAN269484
DVUL882 DVU_2680
DSP255470
DSP216389
DSHI398580 DSHI_1153
DRED349161
DRAD243230 DR_A0013
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DGEO319795 DGEO_1407
DETH243164
DDES207559 DDE_3667
DARO159087 DARO_2912
CVIO243365
CVES412965
CTRA471473 CTLON_0690
CTRA471472 CTL0694
CTET212717
CTEP194439
CSUL444179
CSP501479 CSE45_1539
CRUT413404
CPRO264201 PC0226
CPNE182082 CPB0569
CPNE138677 CPJ0548
CPNE115713 CPN0548
CPNE115711 CP_0204
CPHY357809
CPER289380 CPR_0434
CPER195103 CPF_0443
CPER195102 CPE0547
CPEL335992
CNOV386415
CMUR243161 TC_0719
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_1807
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK0243
CHYD246194
CHUT269798 CHU_2637
CHOM360107
CGLU196627
CFET360106
CFEL264202 CF0813
CEFF196164 CE2644
CDIP257309
CDIF272563 CD2431
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941 CCA_00194
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBEI290402
CACE272562
CABO218497 CAB190
BXEN266265 BXE_C0890
BTUR314724
BTRI382640
BTHE226186
BQUI283165
BOVI236
BMEL359391 BAB1_0181
BLON206672
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCER315749
BBUR224326
BBAC360095
BBAC264462
BAPH372461
BAFZ390236
BABO262698 BRUAB1_0177
AYEL322098
AURANTIMONAS
ASP76114 EBA3193
ASP62977 ACIAD0799
ASP232721 AJS_4088
ASP1667
APHA212042
APER272557
AORE350688
ANAE240017 ANA_1239
AMAR234826
ALAI441768
AFUL224325
ADEH290397 ADEH_3155
ACEL351607 ACEL_2055
ABUT367737 ABU_2013
ABAU360910 BAV0302
ABAC204669 ACID345_2373
AAEO224324 AQ_206


Organism features enriched in list (features available for 309 out of the 330 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0000413117
Arrangment:Pairs 0.000879045112
Arrangment:Singles 0.0037959166286
Disease:Gastroenteritis 0.0050394213
Disease:Pharyngitis 0.005964788
Disease:Pneumonia 0.0014373112
Disease:bronchitis_and_pneumonitis 0.005964788
Endospores:No 0.0004974130211
GC_Content_Range4:0-40 0.0000238136213
GC_Content_Range4:40-60 0.0029229104224
GC_Content_Range7:0-30 3.719e-94347
GC_Content_Range7:50-60 0.000141240107
Genome_Size_Range5:0-2 1.350e-14122155
Genome_Size_Range5:2-4 0.0016574120197
Genome_Size_Range5:4-6 2.259e-1357184
Genome_Size_Range5:6-10 3.033e-61047
Genome_Size_Range9:0-1 0.00030392327
Genome_Size_Range9:1-2 1.157e-1099128
Genome_Size_Range9:3-4 0.00221005277
Genome_Size_Range9:4-5 0.00783424196
Genome_Size_Range9:5-6 3.276e-131688
Genome_Size_Range9:6-8 0.0000267838
Gram_Stain:Gram_Neg 0.0074713164333
Habitat:Specialized 0.00026344053
Optimal_temp.:- 0.0017050120257
Optimal_temp.:30-37 0.0056498418
Optimal_temp.:35-37 0.0050394213
Optimal_temp.:37 0.001000070106
Oxygen_Req:Anaerobic 9.109e-2194102
Oxygen_Req:Facultative 7.326e-1366201
Oxygen_Req:Microaerophilic 0.00565861518
Pathogenic_in:Human 0.003939399213
Pathogenic_in:No 0.0005481138226
Shape:Coccus 0.00004162782
Shape:Irregular_coccus 0.00026421617
Shape:Rod 0.0062334171347
Shape:Sphere 0.00066471719
Shape:Spiral 7.381e-63034
Temp._range:Hyperthermophilic 3.055e-72323
Temp._range:Mesophilic 4.412e-6230473
Temp._range:Thermophilic 0.00159812735



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
AST-PWY (arginine degradation II (AST pathway))120970.4738
IDNCAT-PWY (L-idonate degradation)2461520.4603
GLUCONSUPER-PWY (D-gluconate degradation)2291450.4589
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181400.4555
GLYCOCAT-PWY (glycogen degradation I)2461510.4534
ACETATEUTIL-PWY (superpathway of acetate utilization and formation)2371470.4504
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651920.4482
PWY-561 (superpathway of glyoxylate cycle)1621140.4447
PWY-5148 (acyl-CoA hydrolysis)2271420.4436
PWY0-981 (taurine degradation IV)106860.4420
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111730.4396
GLYOXYLATE-BYPASS (glyoxylate cycle)1691160.4355
GLUCARDEG-PWY (D-glucarate degradation I)1521070.4264
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261760.4252
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951260.4247
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491480.4246
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491480.4246
PWY-5194 (siroheme biosynthesis)3121710.4238
PWY-4041 (γ-glutamyl cycle)2791580.4155
PWY-5340 (sulfate activation for sulfonation)3851930.4131



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11199   EG10191   EG10190   
G74480.9998140.9996980.999264
EG111990.9996440.998959
EG101910.999669
EG10190



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PAIRWISE BLAST SCORES:

  G7448   EG11199   EG10191   EG10190   
G74480.0f01.4e-126.4e-7-
EG111991.1e-140.0f01.8e-7-
EG10191--0.0f0-
EG10190---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- SULFITE-REDUCT-CPLX (sulfite reductase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9990 EG10190 (cysI) BETACOMP-MONOMER (sulfite reductase, hemoprotein subunit)
   *in cand* 0.9998 0.9996 EG10191 (cysJ) ALPHACOMP-MONOMER (sulfite reductase, flavoprotein subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9990 EG11199 (mioC) EG11199-MONOMER (flavoprotein involved in biotin synthesis)
   *in cand* 0.9997 0.9993 G7448 (yqcA) G7448-MONOMER (predicted flavoprotein)

- SO4ASSIM-PWY (sulfate reduction I (assimilatory)) (degree of match pw to cand: 0.250, degree of match cand to pw: 0.500, average score: 0.806)
  Genes in pathway or complex:
             0.9986 0.9967 EG10189 (cysH) PAPSSULFOTRANS-MONOMER (CysH)
   *in cand* 0.9995 0.9990 EG10190 (cysI) BETACOMP-MONOMER (sulfite reductase, hemoprotein subunit)
   *in cand* 0.9998 0.9996 EG10191 (cysJ) ALPHACOMP-MONOMER (sulfite reductase, flavoprotein subunit)
             0.9941 0.9835 EG10185 (cysC) ADENYLYLSULFKIN-MONOMER (CysC)
             0.9974 0.9934 EG10186 (cysD) CYSD-MONOMER (CysD)
             0.9971 0.9923 EG10194 (cysN) CYSN-MONOMER (CysN)
             0.7033 0.3078 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.6466 0.3432 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9990 EG11199 (mioC) EG11199-MONOMER (flavoprotein involved in biotin synthesis)
   *in cand* 0.9997 0.9993 G7448 (yqcA) G7448-MONOMER (predicted flavoprotein)

- SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis) (degree of match pw to cand: 0.143, degree of match cand to pw: 0.500, average score: 0.645)
  Genes in pathway or complex:
             0.9974 0.9934 EG10186 (cysD) CYSD-MONOMER (CysD)
             0.9971 0.9923 EG10194 (cysN) CYSN-MONOMER (CysN)
             0.9941 0.9835 EG10185 (cysC) ADENYLYLSULFKIN-MONOMER (CysC)
   *in cand* 0.9995 0.9990 EG10190 (cysI) BETACOMP-MONOMER (sulfite reductase, hemoprotein subunit)
   *in cand* 0.9998 0.9996 EG10191 (cysJ) ALPHACOMP-MONOMER (sulfite reductase, flavoprotein subunit)
             0.9986 0.9967 EG10189 (cysH) PAPSSULFOTRANS-MONOMER (CysH)
             0.8123 0.4917 EG10193 (cysM) ACSERLYB-MONOMER (CysM)
             0.4532 0.0793 EG10192 (cysK) ACSERLYA-MONOMER (CysK)
             0.6500 0.3740 EG10187 (cysE) SERINE-O-ACETTRAN-MONOMER (serine acetyltransferase monomer)
             0.6804 0.5918 EG10945 (serB) PSERPHOSPHA-MONOMER (phosphoserine phosphatase)
             0.5487 0.1865 EG10944 (serA) PGLYCDEHYDROG-MONOMER (SerA)
             0.1180 0.0460 EG10946 (serC) PSERTRANSAM-MONOMER (SerC)
             0.7033 0.3078 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.6466 0.3432 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9990 EG11199 (mioC) EG11199-MONOMER (flavoprotein involved in biotin synthesis)
   *in cand* 0.9997 0.9993 G7448 (yqcA) G7448-MONOMER (predicted flavoprotein)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10190 EG10191 (centered at EG10191)
EG11199 (centered at EG11199)
G7448 (centered at G7448)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7448   EG11199   EG10191   EG10190   
233/623258/623281/623308/623
AAEO224324:0:Tyes---0
AAUR290340:0:Tyes000-
AAVE397945:0:Tyes-00-
ABAC204669:0:Tyes---0
ABAU360910:0:Tyes---0
ABOR393595:0:Tyes0001
ABUT367737:0:Tyes---0
ACAU438753:0:Tyes1163116301
ACEL351607:0:Tyes---0
ACRY349163:8:Tyes2220
ADEH290397:0:Tyes---0
AEHR187272:0:Tyes-6236230
AFER243159:0:Tyes1-10
AHYD196024:0:Tyes0298721552156
AMAR329726:9:Tyes--0931
AMET293826:0:Tyes-0-478
ANAE240017:0:Tyes---0
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