CANDIDATE ID: 1083

CANDIDATE ID: 1083

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9941033e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.5000016e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7448 (yqcA) (b2790)
   Products of gene:
     - G7448-MONOMER (predicted flavoprotein)

- EG10191 (cysJ) (b2764)
   Products of gene:
     - ALPHACOMP-MONOMER (sulfite reductase, flavoprotein subunit)
     - CPLX0-7841 (sulfite reductase, flavoprotein subunit complex)
       Reactions:
        riboflavin + NADPH + 2 H+  ->  reduced riboflavin + NADP+
     - SULFITE-REDUCT-CPLX (sulfite reductase)
       Reactions:
        3 NADPH + sulfite + 5 H+  ->  3 NADP+ + hydrogen sulfide + 3 H2O
         In pathways
         PWY-821 (PWY-821)
         SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)
         PWY-5345 (PWY-5345)
         SO4ASSIM-PWY (sulfate reduction I (assimilatory))

- EG10190 (cysI) (b2763)
   Products of gene:
     - BETACOMP-MONOMER (sulfite reductase, hemoprotein subunit)
     - SULFITE-REDUCT-CPLX (sulfite reductase)
       Reactions:
        3 NADPH + sulfite + 5 H+  ->  3 NADP+ + hydrogen sulfide + 3 H2O
         In pathways
         PWY-821 (PWY-821)
         SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)
         PWY-5345 (PWY-5345)
         SO4ASSIM-PWY (sulfate reduction I (assimilatory))

- EG10189 (cysH) (b2762)
   Products of gene:
     - PAPSSULFOTRANS-MONOMER (CysH)
     - PAPSSULFOTRANS-CPLX (3'-phospho-adenylylsulfate reductase)
       Reactions:
        phosphoadenosine-5'-phosphosulfate + a reduced thioredoxin  ->  adenosine 3',5'-bisphosphate + sulfite + an oxidized thioredoxin
         In pathways
         PWY-821 (PWY-821)
         SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)
         PWY-5345 (PWY-5345)
         SO4ASSIM-PWY (sulfate reduction I (assimilatory))



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 236
Effective number of orgs (counting one per cluster within 468 clusters): 162

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py23
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-23
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79013
TERY203124 ncbi Trichodesmium erythraeum IMS1013
TELO197221 ncbi Thermosynechococcus elongatus BP-13
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP94122 ncbi Shewanella sp. ANA-34
SSP84588 ncbi Synechococcus sp. WH 81023
SSP64471 ncbi Synechococcus sp. CC93113
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSP1148 ncbi Synechocystis sp. PCC 68033
SSP1131 Synechococcus sp. CC96053
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23383
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63013
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAVE227882 ncbi Streptomyces avermitilis MA-46804
RSP101510 ncbi Rhodococcus jostii RHA14
RPOM246200 ncbi Ruegeria pomeroyi DSS-33
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RMET266264 ncbi Ralstonia metallidurans CH344
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a3
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP296591 ncbi Polaromonas sp. JS6663
PSP117 Pirellula sp.4
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ23
PMEN399739 ncbi Pseudomonas mendocina ymp4
PMAR93060 ncbi Prochlorococcus marinus MIT 92153
PMAR74547 ncbi Prochlorococcus marinus MIT 93133
PMAR74546 ncbi Prochlorococcus marinus MIT 93123
PMAR59920 ncbi Prochlorococcus marinus NATL2A3
PMAR167555 ncbi Prochlorococcus marinus NATL1A3
PMAR167546 ncbi Prochlorococcus marinus MIT 93013
PMAR167542 ncbi Prochlorococcus marinus MIT 95153
PMAR167540 Prochlorococcus marinus pastoris MED4ax3
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13753
PMAR146891 ncbi Prochlorococcus marinus AS96013
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW253
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM54
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP103690 ncbi Nostoc sp. PCC 71203
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NFAR247156 ncbi Nocardia farcinica IFM 101524
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
MXAN246197 ncbi Myxococcus xanthus DK 16224
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-13
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP189918 ncbi Mycobacterium sp. KMS3
MSP164757 ncbi Mycobacterium sp. JLS3
MSP164756 ncbi Mycobacterium sp. MCS3
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAVI243243 ncbi Mycobacterium avium 1044
MAQU351348 ncbi Marinobacter aquaeolei VT84
MAER449447 ncbi Microcystis aeruginosa NIES-8433
MABS561007 ncbi Mycobacterium abscessus ATCC 199774
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)4
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS13
HHAL349124 ncbi Halorhodospira halophila SL13
HCHE349521 ncbi Hahella chejuensis KCTC 23963
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74213
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
FSP1855 Frankia sp. EAN1pec4
FJOH376686 ncbi Flavobacterium johnsoniae UW1013
FALN326424 ncbi Frankia alni ACN14a4
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25943
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
CSP78 Caulobacter sp.4
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CJAP155077 Cellvibrio japonicus3
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN4
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CAULO ncbi Caulobacter crescentus CB154
BVIE269482 ncbi Burkholderia vietnamiensis G43
BTHU412694 ncbi Bacillus thuringiensis Al Hakam3
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-273
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSUB ncbi Bacillus subtilis subtilis 1684
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)3
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCIC186490 Candidatus Baumannia cicadellinicola4
BCER572264 ncbi Bacillus cereus 03BB1023
BCER405917 Bacillus cereus W3
BCER288681 ncbi Bacillus cereus E33L3
BCER226900 ncbi Bacillus cereus ATCC 145793
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB504
BANT592021 ncbi Bacillus anthracis A02483
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor3
BANT260799 ncbi Bacillus anthracis Sterne3
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
AVAR240292 ncbi Anabaena variabilis ATCC 294133
ASP62928 ncbi Azoarcus sp. BH723
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L203
AMAR329726 ncbi Acaryochloris marina MBIC110173
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-13
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
AAUR290340 ncbi Arthrobacter aurescens TC13


Names of the homologs of the genes in the group in each of these orgs
  G7448   EG10191   EG10190   EG10189   
ZMOB264203 ZMO0009ZMO0009ZMO0008ZMO0007
YPSE349747 YPSIP31758_1008YPSIP31758_3311YPSIP31758_3310YPSIP31758_3309
YPSE273123 YPTB3008YPTB0759YPTB0760YPTB0761
YPES386656 YPDSF_1674YPDSF_2987YPDSF_2988YPDSF_2989
YPES377628 YPN_2963YPN_0720YPN_0721YPN_0722
YPES360102 YPA_0513YPA_2870YPA_2869YPA_2868
YPES349746 YPANGOLA_A3440YPANGOLA_A0975YPANGOLA_A0974YPANGOLA_A0973
YPES214092 YPO1039YPO3372YPO3371YPO3366
YPES187410 Y3142Y0818Y0819Y0823
YENT393305 YE3289YE0755YE0756YE0757
XORY360094 XOOORF_3752XOOORF_3752XOOORF_3753XOOORF_3754
XORY342109 XOO3199XOO3199XOO3200XOO3201
XORY291331 XOO3398XOO3399XOO3400XOO3401
XFAS405440 XFASM12_0839XFASM12_0839XFASM12_0838XFASM12_0837
XFAS183190 PD_0716PD_0716PD_0715PD_0714
XFAS160492 XF1499XF1499XF1498XF1497
XCAM487884 XCC-B100_1004XCC-B100_1004XCC-B100_1003XCC-B100_1002
XCAM316273 XCAORF_3512XCAORF_3512XCAORF_3513XCAORF_3514
XCAM314565 XC_0992XC_0992XC_0991XC_0990
XCAM190485 XCC3173XCC3173XCC3174XCC3175
XAXO190486 XAC3330XAC3330XAC3331XAC3332
XAUT78245 XAUT_2498XAUT_2499XAUT_1395
VVUL216895 VV1_1009VV1_1402VV1_1403VV1_1404
VVUL196600 VV0001VV2967VV2966VV2965
VPAR223926 VP0001VP2722VP2721VP2720
VFIS312309 VF0310VF0310VF0311VF0312
VEIS391735 VEIS_0734VEIS_4335VEIS_4333
VCHO345073 VC0395_A2516VC0395_A2795VC0395_A2796VC0395_A2797
VCHO VC0002VC0384VC0385VC0386
TTUR377629 TERTU_3530TERTU_2120TERTU_1744
TERY203124 TERY_3658TERY_3544TERY_2837
TELO197221 TLR1211TLR0339TLL1035
STYP99287 STM2963STM2948STM2947STM2946
SSP94122 SHEWANA3_2823SHEWANA3_0855SHEWANA3_0856SHEWANA3_0857
SSP84588 SYNW0751OR1922SYNW1095OR3480SYNW2164OR2654
SSP64471 GSYN1082GSYN1384GSYN2654
SSP321332 CYB_2882CYB_0180CYB_0438
SSP321327 CYA_1257CYA_0952CYA_1123
SSP1148 SLR1643SLR0963SLR1791
SSP1131 SYNCC9605_1917SYNCC9605_1227SYNCC9605_2309
SSON300269 SSO_2947SSO_2917SSO_2916SSO_2915
SSED425104 SSED_3168SSED_3807SSED_3806SSED_3805
SSAP342451 SSP2408SSP2408SSP2407SSP2409
SPRO399741 SPRO_3795SPRO_0810SPRO_0811SPRO_0812
SPEA398579 SPEA_2890SPEA_0653SPEA_0654SPEA_0655
SONE211586 SO_1622SO_3738SO_3737SO_3736
SLOI323850 SHEW_2642SHEW_0665SHEW_0666SHEW_0667
SHIGELLA S2997CYSJCYSICYSH
SHAL458817 SHAL_2987SHAL_3543SHAL_3542SHAL_3541
SHAE279808 SH0414SH0414SH0415SH0413
SGLO343509 SG1948SG0516SG0517SG0518
SFLE373384 SFV_2667SFV_2741SFV_2742SFV_2743
SFLE198214 AAN44291.1AAN44269.1AAN44268.1AAN44267.1
SERY405948 SACE_4205SACE_1476SACE_1475
SEPI176280 SE_2180SE_2180SE_2179SE_2181
SEPI176279 SERP2191SERP2191SERP2190SERP2192
SENT454169 SEHA_C3170SEHA_C3143SEHA_C3142SEHA_C3141
SENT321314 SCH_2903SCH_2879SCH_2878SCH_2877
SENT295319 SPA2827SPA2804SPA2803SPA2802
SENT220341 STY3102STY3076STY3075STY3074
SENT209261 T2872T2849T2848T2847
SELO269084 SYC0566_CSYC1478_CSYC1600_D
SDYS300267 SDY_3007SDY_2966SDY_2965SDY_2964
SDEN318161 SDEN_1547SDEN_0932SDEN_0933SDEN_0934
SDEG203122 SDE_1473SDE_1473SDE_2013SDE_1669
SBOY300268 SBO_2671SBO_2647SBO_2646SBO_2645
SBAL402882 SHEW185_1438SHEW185_0919SHEW185_0920SHEW185_0921
SBAL399599 SBAL195_1474SBAL195_0953SBAL195_0954SBAL195_0955
SAVE227882 SAV2330SAV2330SAV2127SAV2129
RSP101510 RHA1_RO01797RHA1_RO01797RHA1_RO01251RHA1_RO01252
RPOM246200 SPO_3703SPO_2634SPO_2635
RPAL316058 RPB_1753RPB_1754RPB_1044
RMET266264 RMET_5636RMET_3467RMET_2816RMET_2814
REUT381666 H16_B2500H16_B2500H16_A2999H16_A2997
REUT264198 REUT_B5211REUT_B5211REUT_A2696REUT_A2694
PSYR223283 PSPTO_1186PSPTO_4569PSPTO_4877PSPTO_2280
PSYR205918 PSYR_1024PSYR_4243PSYR_2078
PSTU379731 PST_1138PST_0997PST_2236PST_2027
PSP296591 BPRO_2982BPRO_1630BPRO_2337
PSP117 RB11009RB380RB7465RB6993
PPUT76869 PPUTGB1_4612PPUTGB1_1302PPUTGB1_1978PPUTGB1_1929
PPUT351746 PPUT_4488PPUT_4016PPUT_3324PPUT_3442
PPUT160488 PP_4628PP_1703PP_2371PP_2328
PPRO298386 PBPRA2972PBPRA3321PBPRA3320PBPRA3319
PNAP365044 PNAP_1908PNAP_2942PNAP_2429
PMEN399739 PMEN_3283PMEN_0793PMEN_2147PMEN_2545
PMAR93060 P9215_12111P9215_08521P9215_00941
PMAR74547 PMT1101PMT0579PMT1624
PMAR74546 PMT9312_1086PMT9312_0766PMT9312_0084
PMAR59920 PMN2A_0675PMN2A_0162PMN2A_1445
PMAR167555 NATL1_15081NATL1_07941NATL1_01461
PMAR167546 P9301ORF_1202P9301ORF_0833P9301ORF_0096
PMAR167542 P9515ORF_1217P9515ORF_0866P9515ORF_0094
PMAR167540 PMM1075PMM0758PMM0081
PMAR167539 PRO_1123PRO_0830PRO_0095
PMAR146891 A9601_11811A9601_08201A9601_00941
PLUM243265 PLU0667PLU0703PLU0704PLU0705
PING357804 PING_3742PING_3434PING_3435PING_3436
PHAL326442 PSHAA1969PSHAA0154PSHAA0155PSHAA0156
PFLU220664 PFL_0955PFL_0863PFL_2835PFL_1854
PFLU216595 PFLU5152PFLU3426PFLU4642
PFLU205922 PFL_0897PFL_0797PFL_2513PFL_1757
PENT384676 PSEEN4620PSEEN1417PSEEN3407PSEEN1896
PATL342610 PATL_3183PATL_4039PATL_4038PATL_4037
PAER208964 PA3435PA4513PA4130PA1756
PAER208963 PA14_19660PA14_58560PA14_10550PA14_41840
OIHE221109 OB1653OB1653OB1654OB1652
OCAR504832 OCAR_4547OCAR_4547OCAR_4548OCAR_7387
NWIN323098 NWI_0590NWI_0590NWI_0591NWI_2761
NSP103690 ALL4121ALR1348ALL4464
NOCE323261 NOC_1305NOC_1305NOC_1306NOC_2290
NMEN374833 NMCC_1070NMCC_1070NMCC_1069NMCC_1073
NMEN272831 NMC1092NMC1092NMC1091NMC1095
NMEN122587 NMA1363NMA1363NMA1362NMA1366
NMEN122586 NMB_1190NMB_1190NMB_1189NMB_1193
NHAM323097 NHAM_0682NHAM_0682NHAM_0683NHAM_3561
NFAR247156 NFA51300NFA51300NFA14190NFA14180
NEUT335283 NEUT_1185NEUT_1185NEUT_1184NEUT_1187
NEUR228410 NE0853NE0853NE0852NE0855
MXAN246197 MXAN_2335MXAN_2335MXAN_2334MXAN_2340
MVAN350058 MVAN_3491MVAN_3857MVAN_3858
MSUC221988 MS1250MS1250MS1249MS1253
MSP409 M446_5483M446_5483M446_5484M446_5481
MSP400668 MMWYL1_0226MMWYL1_0226MMWYL1_2345MMWYL1_2969
MSP189918 MKMS_3291MKMS_3537MKMS_3538
MSP164757 MJLS_3240MJLS_3487MJLS_3488
MSP164756 MMCS_3229MMCS_3474MMCS_3475
MPET420662 MPE_A3726MPE_A3726MPE_A1503MPE_A1501
MMAG342108 AMB0176AMB2209AMB2210
MGIL350054 MFLV_0347MFLV_3016MFLV_2686MFLV_2685
MFLA265072 MFLA_0428MFLA_2733MFLA_1671MFLA_1679
MEXT419610 MEXT_2236MEXT_2236MEXT_2237MEXT_2234
MCAP243233 MCA_0431MCA_0431MCA_2059MCA_2468
MAVI243243 MAV_2075MAV_2075MAV_1787MAV_2153
MAQU351348 MAQU_3588MAQU_3213MAQU_1528MAQU_1582
MAER449447 MAE_12570MAE_17290MAE_12690
MABS561007 MAB_2485CMAB_2485CMAB_1662CMAB_1661C
LSPH444177 BSPH_0592BSPH_0592BSPH_0593BSPH_0598
LBIF456481 LEPBI_I1180LEPBI_I1180LEPBI_I1181LEPBI_I1184
LBIF355278 LBF_1137LBF_1137LBF_1138LBF_1141
KPNE272620 GKPORF_B2467GKPORF_B2450GKPORF_B4567GKPORF_B2448
JSP375286 MMA_3617MMA_3617MMA_2452MMA_2454
JSP290400 JANN_0673JANN_1773JANN_1772
HHAL349124 HHAL_0187HHAL_0187HHAL_1777
HCHE349521 HCH_00784HCH_02538HCH_04016
HARS204773 HEAR3398HEAR3398HEAR2392HEAR2394
GVIO251221 GLL2295GLR1848GLR1656
GTHE420246 GTNG_1269GTNG_1269GTNG_1270GTNG_0389
GKAU235909 GK1409GK1409GK1410GK0416
FSP1855 FRANEAN1_1491FRANEAN1_1491FRANEAN1_6105FRANEAN1_6103
FJOH376686 FJOH_4069FJOH_1504FJOH_1501
FALN326424 FRAAL5324FRAAL5324FRAAL1017FRAAL1019
ESP42895 ENT638_3243ENT638_3227ENT638_3226ENT638_3225
ELIT314225 ELI_00100ELI_01880ELI_01870
EFER585054 EFER_0271EFER_0298EFER_0299EFER_0300
ECOO157 Z4106CYSJCYSICYSH
ECOL83334 ECS3650ECS3619ECS3618ECS3617
ECOL585397 ECED1_3243ECED1_3213ECED1_3212ECED1_3211
ECOL585057 ECIAI39_3212ECIAI39_2946ECIAI39_2945ECIAI39_2944
ECOL585056 ECUMN_3119ECUMN_3092ECUMN_3091ECUMN_3090
ECOL585055 EC55989_3069EC55989_3038EC55989_3037EC55989_3036
ECOL585035 ECS88_3058ECS88_3028ECS88_3027ECS88_3026
ECOL585034 ECIAI1_2899ECIAI1_2868ECIAI1_2867ECIAI1_2866
ECOL481805 ECOLC_0922ECOLC_0948ECOLC_0949ECOLC_0950
ECOL469008 ECBD_0939ECBD_0965ECBD_0966ECBD_0967
ECOL439855 ECSMS35_2930ECSMS35_2892ECSMS35_2891ECSMS35_2890
ECOL413997 ECB_02635ECB_02609ECB_02608ECB_02607
ECOL409438 ECSE_3050ECSE_3020ECSE_3019ECSE_3018
ECOL405955 APECO1_3741APECO1_3768APECO1_3769APECO1_3770
ECOL364106 UTI89_C3160UTI89_C3128UTI89_C3127UTI89_C3126
ECOL362663 ECP_2771ECP_2738ECP_2737ECP_2736
ECOL331111 ECE24377A_3094ECE24377A_3066ECE24377A_3065ECE24377A_3064
ECOL316407 ECK2784:JW2761:B2790ECK2759:JW2734:B2764ECK2758:JW2733:B2763ECK2757:JW2732:B2762
ECOL199310 C3356C3323C3322C3321
ECAR218491 ECA1026ECA3547ECA3546ECA3545
CSP78 CAUL_3992CAUL_3992CAUL_3267CAUL_3265
CSAL290398 CSAL_1806CSAL_2696CSAL_2695CSAL_2427
CPSY167879 CPS_4759CPS_4759CPS_4760CPS_4761
CJAP155077 CJA_2403CJA_2954CJA_2042
CBLO291272 BPEN_163BPEN_163BPEN_164BPEN_165
CBLO203907 BFL158BFL159BFL160
CAULO CC3063CC3063CC1119CC1121
BVIE269482 BCEP1808_5043BCEP1808_2558BCEP1808_2556
BTHU412694 BALH_2868BALH_1279BALH_1276
BTHU281309 BT9727_2981BT9727_1306BT9727_1303
BTHA271848 BTH_II1172BTH_II1172BTH_I0814BTH_I0816
BSUI470137 BSUIS_B0239BSUIS_A0182BSUIS_A0183
BSUI204722 BR_A0233BR_0181BR_0182
BSUB BSU33440BSU33440BSU33430BSU15570
BSP376 BRADO3794BRADO3793BRADO1069
BSP36773 BCEP18194_B1346BCEP18194_B1346BCEP18194_A5806BCEP18194_A5804
BSP107806 BU428BU427BU426
BPUM315750 BPUM_1777BPUM_1777BPUM_1778BPUM_1456
BPSE320373 BURPS668_A1752BURPS668_A1752BURPS668_1006BURPS668_1008
BPSE320372 BURPS1710B_B0286BURPS1710B_B0286BURPS1710B_A1220BURPS1710B_A1222
BPSE272560 BPSS1241BPSS1241BPSL0956BPSL0958
BPET94624 BPET3048BPET3048BPET3049BPET1908
BPER257313 BP1209BP1209BP3432BP0970
BPAR257311 BPP1823BPP1823BPP0395BPP1659
BMEL224914 BMEII1011BMEI1766BMEI1765
BMAL320389 BMA10247_A1247BMA10247_A1247BMA10247_1662BMA10247_1660
BMAL320388 BMASAVP1_0080BMASAVP1_0080BMASAVP1_A2348BMASAVP1_A2346
BMAL243160 BMA_A1084BMA_A1084BMA_0663BMA_0665
BLIC279010 BL01949BL01949BL01950BL01979
BJAP224911 BLL4570BLL4571BLR1481
BHAL272558 BH0609BH0609BH0610BH1486
BCLA66692 ABC0618ABC0618ABC0619ABC0611
BCIC186490 BCI_0218BCI_0218BCI_0217BCI_0216
BCER572264 BCA_3251BCA_1481BCA_1478
BCER405917 BCE_3239BCE_1547BCE_1544
BCER288681 BCE33L2921BCE33L1307BCE33L1304
BCER226900 BC_3211BC_1424BC_1421
BCEN331272 BCEN2424_4504BCEN2424_4504BCEN2424_2475BCEN2424_2473
BCEN331271 BCEN_3865BCEN_3865BCEN_1864BCEN_1862
BCAN483179 BCAN_B0235BCAN_A0186BCAN_A0187
BBRO257310 BB3283BB3283BB0397BB3449
BANT592021 BAA_3269BAA_1513BAA_1510
BANT568206 BAMEG_1392BAMEG_3149BAMEG_3152
BANT261594 GBAA3221GBAA1443GBAA1440
BANT260799 BAS2993BAS1333BAS1330
BAMY326423 RBAM_030610RBAM_030610RBAM_030600RBAM_015400
BAMB398577 BAMMC406_4398BAMMC406_4398BAMMC406_2392BAMMC406_2390
BAMB339670 BAMB_3934BAMB_3934BAMB_2524BAMB_2522
AVAR240292 AVA_0782AVA_5043AVA_3330
ASP62928 AZO3058AZO0432AZO0430
ASAL382245 ASA_4362ASA_4362ASA_0936
APLE434271 APJL_1591APJL_1882APJL_1881APJL_1885
APLE416269 APL_1563APL_1843APL_1842
AMAR329726 AM1_2941AM1_3880AM1_0876
AHYD196024 AHA_1165AHA_3371AHA_3372AHA_3373
AFER243159 AFE_3211AFE_3211AFE_3210AFE_3209
AEHR187272 MLG_1892MLG_1264MLG_2114
ACRY349163 ACRY_2801ACRY_2801ACRY_2799ACRY_2800
ACAU438753 AZC_1828AZC_0680AZC_0681AZC_0923
ABOR393595 ABO_2124ABO_2124ABO_2125ABO_1686
AAUR290340 AAUR_PTC20214AAUR_PTC20214AAUR_3092


Organism features enriched in list (features available for 220 out of the 236 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00043682192
Disease:Bubonic_plague 0.002766166
Disease:Dysentery 0.002766166
Disease:Gastroenteritis 0.00059141113
Endospores:No 1.291e-1241211
GC_Content_Range4:0-40 4.595e-1932213
GC_Content_Range4:40-60 2.882e-7113224
GC_Content_Range4:60-100 0.000030075145
GC_Content_Range7:0-30 3.376e-7347
GC_Content_Range7:30-40 2.843e-1129166
GC_Content_Range7:50-60 1.641e-866107
GC_Content_Range7:60-70 0.000017971134
Genome_Size_Range5:0-2 2.360e-2311155
Genome_Size_Range5:2-4 8.155e-651197
Genome_Size_Range5:4-6 3.573e-21121184
Genome_Size_Range5:6-10 2.374e-93747
Genome_Size_Range9:0-1 0.0015139327
Genome_Size_Range9:1-2 7.954e-208128
Genome_Size_Range9:2-3 0.000035127120
Genome_Size_Range9:4-5 0.00014875296
Genome_Size_Range9:5-6 2.691e-176988
Genome_Size_Range9:6-8 8.862e-83038
Gram_Stain:Gram_Neg 8.677e-9158333
Gram_Stain:Gram_Pos 0.000017836150
Habitat:Aquatic 0.00425144591
Habitat:Host-associated 0.000781361206
Habitat:Specialized 0.00289111153
Habitat:Terrestrial 0.00930851831
Motility:No 3.043e-732151
Motility:Yes 3.931e-8132267
Optimal_temp.:- 1.424e-6124257
Optimal_temp.:37 0.000624026106
Oxygen_Req:Aerobic 0.008979681185
Oxygen_Req:Anaerobic 3.654e-184102
Oxygen_Req:Facultative 0.001098792201
Shape:Coccus 0.00007721682
Shape:Rod 2.952e-9164347
Shape:Sphere 0.0070810219
Shape:Spiral 0.0004781434
Temp._range:Mesophilic 0.0010065192473
Temp._range:Thermophilic 0.0042384635



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 287
Effective number of orgs (counting one per cluster within 468 clusters): 232

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4401
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE292459 ncbi Symbiobacterium thermophilum IAM 148631
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP387093 ncbi Sulfurovum sp. NBC37-10
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis1
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SACI56780 ncbi Syntrophus aciditrophicus SB0
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170291
RSP357808 ncbi Roseiflexus sp. RS-11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 421
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm701
PMOB403833 ncbi Petrotoga mobilis SJ950
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP266779 ncbi Chelativorans sp. BNC11
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP1
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GSUL243231 ncbi Geobacter sulfurreducens PCA1
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
CVIO243365 ncbi Chromobacterium violaceum ATCC 124721
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6301
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1111
CBUR360115 ncbi Coxiella burnetii RSA 3311
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BQUI283165 ncbi Bartonella quintana Toulouse0
BOVI236 Brucella ovis1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ABAU360910 ncbi Bordetella avium 197N1
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  G7448   EG10191   EG10190   EG10189   
WSUC273121 WS1010
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX1979
TWHI218496
TWHI203267
TVOL273116
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TDEN292415
TDEN243275
TCRU317025 TCR_1893
TACI273075
SWOL335541
STRO369723 STROP_3703
STHE322159 STER_1148
STHE299768 STR1183
STHE292459 STH1142
STHE264199 STU1183
SSUI391296 SSU98_1545
SSUI391295 SSU05_1534
SSP387093
SRUB309807 SRU_0422
SPYO370554 MGAS10750_SPY0631
SPYO370553 MGAS2096_SPY0609
SPYO370552 MGAS10270_SPY0605
SPYO370551 MGAS9429_SPY0601
SPYO319701 M28_SPY0526
SPYO293653 M5005_SPY0548
SPYO286636 M6_SPY0568
SPYO198466 SPYM3_0471
SPYO193567 SPS1384
SPYO186103 SPYM18_0788
SPYO160490 SPY0721
SPNE488221 SP70585_1362
SPNE487214 SPH_1439
SPNE487213 SPT_0929
SPNE171101 SPR1175
SPNE170187 SPN10095
SPNE1313 SPJ_1213
SMUT210007 SMU_1294
SMAR399550
SGOR29390 SGO_0850
SFUM335543
SALA317655 SALA_0768
SACI56780
RTYP257363
RSPH349101 RSPH17029_0592
RSP357808 ROSERS_0739
RSAL288705 RSAL33209_2619
RRIC452659
RRIC392021
RPRO272947
RPAL316056 RPC_4011
RMAS416276
RFEL315456
RETL347834 RHE_CH01132
RCON272944
RCAS383372 RCAS_0330
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_1506
PRUM264731
PPEN278197
PMUL272843 PM1484
PMOB403833
PLUT319225 PLUT_1561
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PCRY335284 PCRYO_1396
PAST100379
PARS340102
PACN267747
PABY272844
OTSU357244
NSP387092 NIS_1436
NSEN222891
NPHA348780 NP1146A
NGON242231
MTHE349307
MTHE264732
MTHE187420
MSYN262723
MSTA339860
MSP266779 MESO_3992
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_0991
MMAR426368 MMARC7_0954
MMAR402880 MMARC5_1726
MMAR368407
MMAR267377 MMP1681
MLEP272631
MLAB410358
MKAN190192
MJAN243232 MJ_0973
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665 MAEO_1343
LXYL281090
LWEL386043
LSAK314315 LSA1516
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
IHOS453591
HWAL362976
HSP64091
HSOM228400 HSM_1859
HSOM205914 HS_1706
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914 HMUK_0435
HMOD498761
HMAR272569 RRNAC2992
HHEP235279
HDUC233412 HD_1996
HBUT415426 HBUT_1541
HACI382638
GSUL243231 GSU_1716
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
ERUM302409
ERUM254945
EFAE226185 EF_2201
ECHA205920
ECAN269484
DVUL882 DVU_1566
DSP255470
DSP216389
DRED349161
DPSY177439
DOLE96561
DNOD246195
DHAF138119 DSY2953
DETH243164
DDES207559 DDE_1789
CVIO243365 CV_3574
CVES412965
CTRA471473 CTLON_0690
CTRA471472 CTL0694
CTET212717
CTEP194439
CSUL444179
CRUT413404
CPRO264201 PC0226
CPNE182082 CPB0569
CPNE138677 CPJ0548
CPNE115713 CPN0548
CPNE115711 CP_0204
CPHY357809
CPER289380 CPR_0434
CPER195103 CPF_0443
CPER195102 CPE0547
CPEL335992
CNOV386415
CMUR243161 TC_0719
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_1807
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CHYD246194
CHOM360107
CGLU196627 CG3116
CFET360106
CFEL264202 CF0813
CDIP257309
CDIF272563 CD2431
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941 CCA_00194
CBUR434922 COXBU7E912_0604
CBUR360115 COXBURSA331_A1549
CBUR227377
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBEI290402
CACE272562
CABO218497 CAB190
BXEN266265 BXE_C0890
BTUR314724
BTRI382640
BTHE226186
BQUI283165
BOVI236 GBOORF0186
BLON206672
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCER315749 BCER98_1143
BBUR224326
BBAC360095
BBAC264462
BAPH372461
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667 ARTH_3124
APHA212042
APER272557
AORE350688
AMET293826 AMET_3499
AMAR234826
ALAI441768
AFUL224325
ADEH290397 ADEH_3155
ABAU360910 BAV0302
AAEO224324 AQ_206


Organism features enriched in list (features available for 271 out of the 287 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 7.042e-76492
Arrangment:Clusters 0.0003061117
Disease:Pharyngitis 0.002060988
Disease:Wide_range_of_infections 0.00019601111
Disease:bronchitis_and_pneumonitis 0.002060988
Endospores:No 1.382e-6125211
GC_Content_Range4:0-40 2.291e-20152213
GC_Content_Range4:40-60 0.001537388224
GC_Content_Range4:60-100 1.244e-1330145
GC_Content_Range7:0-30 1.630e-104247
GC_Content_Range7:30-40 7.930e-10110166
GC_Content_Range7:50-60 1.230e-726107
GC_Content_Range7:60-70 6.069e-1327134
Genome_Size_Range5:0-2 1.409e-40140155
Genome_Size_Range5:4-6 1.674e-2727184
Genome_Size_Range5:6-10 5.073e-10347
Genome_Size_Range9:0-1 0.00002222327
Genome_Size_Range9:1-2 1.141e-33117128
Genome_Size_Range9:4-5 2.435e-91996
Genome_Size_Range9:5-6 3.610e-16888
Genome_Size_Range9:6-8 1.068e-8238
Gram_Stain:Gram_Neg 5.728e-6129333
Habitat:Host-associated 0.0013073112206
Habitat:Specialized 0.00635663353
Habitat:Terrestrial 0.0009603631
Motility:Yes 0.0001352103267
Optimal_temp.:- 0.0015071103257
Optimal_temp.:25-30 0.0000934119
Optimal_temp.:30-37 0.0063492318
Optimal_temp.:37 0.000025668106
Oxygen_Req:Aerobic 8.888e-857185
Oxygen_Req:Anaerobic 8.921e-2794102
Oxygen_Req:Facultative 0.000666576201
Oxygen_Req:Microaerophilic 0.00501541418
Shape:Irregular_coccus 0.00033851517
Shape:Rod 3.394e-6135347
Shape:Sphere 0.00008691719
Shape:Spiral 0.00561482334
Temp._range:Hyperthermophilic 0.00004512023
Temp._range:Mesophilic 0.0005949205473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652310.6230
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112090.6035
PWY-5340 (sulfate activation for sulfonation)3852320.5867
PWY-4041 (γ-glutamyl cycle)2791880.5477
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491690.5045
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491690.5045
GLUCONSUPER-PWY (D-gluconate degradation)2291600.5027
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392030.4955
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891820.4812
PWY-5194 (siroheme biosynthesis)3121900.4752
PWY0-981 (taurine degradation IV)106940.4742
PWY-561 (superpathway of glyoxylate cycle)1621230.4649
PWY-5386 (methylglyoxal degradation I)3051850.4598
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222240.4540
GLYOXYLATE-BYPASS (glyoxylate cycle)1691250.4538
GLYCOCAT-PWY (glycogen degradation I)2461600.4523
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951370.4505
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582330.4462
PWY-5148 (acyl-CoA hydrolysis)2271500.4401
PWY-5918 (heme biosynthesis I)2721690.4401
PWY0-1313 (acetate conversion to acetyl-CoA)3852100.4369
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181450.4330
AST-PWY (arginine degradation II (AST pathway))120970.4325
PENTOSE-P-PWY (pentose phosphate pathway)3942120.4306
GLUCARDEG-PWY (D-glucarate degradation I)1521130.4270
PWY-5913 (TCA cycle variation IV)3011780.4236
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982120.4218
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291880.4200
GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)2701650.4188
PWY-5188 (tetrapyrrole biosynthesis I)4392240.4185
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861710.4161
OXIDATIVEPENT-PWY (pentose phosphate pathway (oxidative branch))4042130.4156
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481940.4143
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491090.4077
PWY-6087 (4-chlorocatechol degradation)2231430.4040



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10191   EG10190   EG10189   
G74480.9996980.9992640.9986
EG101910.9996690.999348
EG101900.999883
EG10189



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PAIRWISE BLAST SCORES:

  G7448   EG10191   EG10190   EG10189   
G74480.0f06.4e-7--
EG10191-0.0f0--
EG10190--0.0f0-
EG10189---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- SULFITE-REDUCT-CPLX (sulfite reductase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9993 EG10190 (cysI) BETACOMP-MONOMER (sulfite reductase, hemoprotein subunit)
   *in cand* 0.9997 0.9993 EG10191 (cysJ) ALPHACOMP-MONOMER (sulfite reductase, flavoprotein subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG10189 (cysH) PAPSSULFOTRANS-MONOMER (CysH)
   *in cand* 0.9994 0.9986 G7448 (yqcA) G7448-MONOMER (predicted flavoprotein)

- SO4ASSIM-PWY (sulfate reduction I (assimilatory)) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.750, average score: 0.806)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9986 EG10189 (cysH) PAPSSULFOTRANS-MONOMER (CysH)
   *in cand* 0.9997 0.9993 EG10190 (cysI) BETACOMP-MONOMER (sulfite reductase, hemoprotein subunit)
   *in cand* 0.9997 0.9993 EG10191 (cysJ) ALPHACOMP-MONOMER (sulfite reductase, flavoprotein subunit)
             0.9981 0.9959 EG10185 (cysC) ADENYLYLSULFKIN-MONOMER (CysC)
             0.9990 0.9980 EG10186 (cysD) CYSD-MONOMER (CysD)
             0.9989 0.9978 EG10194 (cysN) CYSN-MONOMER (CysN)
             0.5497 0.3078 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.5954 0.1383 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9986 G7448 (yqcA) G7448-MONOMER (predicted flavoprotein)

- SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis) (degree of match pw to cand: 0.214, degree of match cand to pw: 0.750, average score: 0.645)
  Genes in pathway or complex:
             0.9990 0.9980 EG10186 (cysD) CYSD-MONOMER (CysD)
             0.9989 0.9978 EG10194 (cysN) CYSN-MONOMER (CysN)
             0.9981 0.9959 EG10185 (cysC) ADENYLYLSULFKIN-MONOMER (CysC)
   *in cand* 0.9997 0.9993 EG10190 (cysI) BETACOMP-MONOMER (sulfite reductase, hemoprotein subunit)
   *in cand* 0.9997 0.9993 EG10191 (cysJ) ALPHACOMP-MONOMER (sulfite reductase, flavoprotein subunit)
   *in cand* 0.9995 0.9986 EG10189 (cysH) PAPSSULFOTRANS-MONOMER (CysH)
             0.9355 0.9093 EG10193 (cysM) ACSERLYB-MONOMER (CysM)
             0.6344 0.4468 EG10192 (cysK) ACSERLYA-MONOMER (CysK)
             0.6007 0.3740 EG10187 (cysE) SERINE-O-ACETTRAN-MONOMER (serine acetyltransferase monomer)
             0.5814 0.4509 EG10945 (serB) PSERPHOSPHA-MONOMER (phosphoserine phosphatase)
             0.5324 0.1865 EG10944 (serA) PGLYCDEHYDROG-MONOMER (SerA)
             0.2364 0.0586 EG10946 (serC) PSERTRANSAM-MONOMER (SerC)
             0.5497 0.3078 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.5954 0.1383 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9986 G7448 (yqcA) G7448-MONOMER (predicted flavoprotein)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10189 EG10190 EG10191 (centered at EG10190)
G7448 (centered at G7448)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7448   EG10191   EG10190   EG10189   
233/623281/623308/623345/623
AAEO224324:0:Tyes--0-
AAUR290340:0:Tyes00--
AAUR290340:2:Tyes---0
AAVE397945:0:Tyes-4401-0
ABAC204669:0:Tyes--15520
ABAU360910:0:Tyes--0-
ABOR393595:0:Tyes4434434440
ABUT367737:0:Tyes--0160
ACAU438753:0:Tyes116301248
ACEL351607:0:Tyes--10
ACRY349163:8:Tyes2201
ADEH290397:0:Tyes--0-
AEHR187272:0:Tyes-6230843
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ASP76114:2:Tyes-331-0
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ESP42895:1:Tyes18210
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GKAU235909:1:Tyes1019101910200
GMET269799:1:Tyes--0336
GOXY290633:5:Tyes--2670
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GTHE420246:1:Tyes8688688690
GURA351605:0:Tyes--640
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PMAR74546:0:Tyes-10186950
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PMAR93060:0:Tyes-11347720
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RMET266264:1:Tyes0---
RMET266264:2:Tyes-65220
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ZMOB264203:0:Tyes2210



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